Citrus Sinensis ID: 039897

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHccccccccEEEEccccccHHHHHHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccHHHHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHcccccccccccccccHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccHHcccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEcccHHHcccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEcccccHHHHHHHHHHHcccEEEEEEEEccEccccHHHHccHHHHHHHHHHccccccEcHHHHHHHHHHHEccccccEEcccEEccc
Coil and Loop (DISEMBL)
masgnqqfppqkqeaqpgkehvmeptpqftshdykpsnklrGKVALvtggdsgiGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAktsdakdpmaisadlgfdenCKRVVDEVVNAYGKIDILVNNAavqykagsveeiDEERLERVFRTNIFSHFFMTRHSlrhmnegsaiinttsveplwhspeaRGLALQLVERGirvngvapgpiwtplipssfseeesaqfgsevpmkragqpievapcYVFLacnhcssyitgqvlhpn
Flexible Loop (DISEMBL)
masgnqqfppqkqeaqpgkeHVMEPTPqftshdykpsnkLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILReaktsdakdpmaisadlgfdenCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN
Low Complexity Region (SEG)
MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN
Disordered region (IsUnstruct)
*****************************************GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK***************************ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLI***********************PIEVAPCYVFLACNHCSSYITGQVL***
Disordered Region (DISOPRED)
******Q**************VMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE*****FGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN
Disordered Region (DISEMBL)
***********************EPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSF************PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN
Disordered Region (DISPRO)
**********************MEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q9FZ42	288	Glucose and ribitol dehyd	no	no	0.963	0.909	0.742	1e-122
Q5KTS5	291	Glucose and ribitol dehyd	N/A	no	0.988	0.924	0.700	1e-115
Q9MA93	289	Glucose and ribitol dehyd	no	no	0.985	0.927	0.685	1e-113
Q75KH3	300	Glucose and ribitol dehyd	yes	no	0.988	0.896	0.604	1e-95
P80873	286	General stress protein 39	yes	no	0.974	0.926	0.461	2e-66
O07575	289	Uncharacterized oxidoredu	no	no	0.941	0.885	0.469	2e-62
P40397	285	Uncharacterized oxidoredu	no	no	0.948	0.905	0.444	7e-61
Q10216	286	Uncharacterized oxidoredu	yes	no	0.944	0.898	0.386	3e-50
P0AG84	294	Uncharacterized oxidoredu	N/A	no	0.937	0.867	0.389	2e-46
P0AG85	294	Uncharacterized oxidoredu	N/A	no	0.937	0.867	0.389	2e-46

>sp|Q9FZ42|GRDH1_ARATH Glucose and ribitol dehydrogenase homolog 1 OS=Arabidopsis thaliana GN=At1g54870 PE=1 SV=1

 Score =  437 bits (1124), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/276 (74%), Positives = 235/276 (85%), Gaps = 14/276 (5%)

Query: 11  QKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVA 70
           QKQ AQPGKEHVME +PQF+S DY+PSNKLRGKVAL+TGGDSGIGRAV +C+A EGATVA
Sbjct: 6   QKQHAQPGKEHVMESSPQFSSSDYQPSNKLRGKVALITGGDSGIGRAVGYCFASEGATVA 65

Query: 71  FTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDIL 130
           FTYVK QEEKDAQETL++L+E KTSD+K+P+AI  DLGFDENCKRVVDEVVNA+G+ID+L
Sbjct: 66  FTYVKGQEEKDAQETLQMLKEVKTSDSKEPIAIPTDLGFDENCKRVVDEVVNAFGRIDVL 125

Query: 131 VNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH 190
           +NNAA QY++ ++EEIDE RLERVFRTNIFS+FF+TRH+L+HM EGS+IINTTSV     
Sbjct: 126 INNAAEQYESSTIEEIDEPRLERVFRTNIFSYFFLTRHALKHMKEGSSIINTTSVNAYKG 185

Query: 191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE 236
           +                 RGLALQL E+GIRVNGVAPGPIWTPLIP+SF+EE+   FGSE
Sbjct: 186 NASLLDYTATKGAIVAFTRGLALQLAEKGIRVNGVAPGPIWTPLIPASFNEEKIKNFGSE 245

Query: 237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           VPMKRAGQPIEVAP YVFLACNHCSSY TGQVLHPN
Sbjct: 246 VPMKRAGQPIEVAPSYVFLACNHCSSYFTGQVLHPN 281

May act as a short alcohol-polyol-sugar dehydrogenase possibly related to carbohydrate metabolism and the acquisition of desiccation tolerance. May also be involved in signal transduction.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q5KTS5|GRDH_DAUCA Glucose and ribitol dehydrogenase OS=Daucus carota GN=CAISE5 PE=2 SV=1

 Score =  414 bits (1064), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/287 (70%), Positives = 238/287 (82%), Gaps = 18/287 (6%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MASG Q FPPQKQE+QPGKEH+M+P+PQ  S  YKP+NKL+GKVALVTGGDSGIGR+V +
Sbjct: 1   MASGGQ-FPPQKQESQPGKEHLMDPSPQHASPHYKPANKLQGKVALVTGGDSGIGRSVCY 59

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
            +ALEGATVAFT+VK  E+KDA ETLE+LR+AK+SDAKDP+AI+ADLGFD+NCK+VVD+V
Sbjct: 60  HFALEGATVAFTFVKGHEDKDANETLELLRKAKSSDAKDPIAIAADLGFDDNCKKVVDQV 119

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           VNA+G ID+LVNNAA QYKA +VE+IDEERLERVFRTNIF++FFM RH+L+HM EGS II
Sbjct: 120 VNAFGSIDVLVNNAAEQYKASTVEDIDEERLERVFRTNIFAYFFMARHALKHMREGSTII 179

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTS+     + +               RGL+LQL+ +GIRVNGVAPGP+WTPLIPSSF 
Sbjct: 180 NTTSINAYKGNAKLLDYTATKGAIVAFTRGLSLQLISKGIRVNGVAPGPVWTPLIPSSFD 239

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLA-CNHCSSYITGQVLHPN 272
           EEE  QFGSEVPMKRAGQP E+A  YVFLA C+  SSY +GQVLHPN
Sbjct: 240 EEEVKQFGSEVPMKRAGQPYEIATAYVFLASCD--SSYYSGQVLHPN 284

May act as a short alcohol-polyol-sugar dehydrogenase possibly related to carbohydrate metabolism and the acquisition of desiccation tolerance. May also be involved in signal transduction.

Daucus carota (taxid: 4039)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9MA93|GRDH2_ARATH Glucose and ribitol dehydrogenase homolog 2 OS=Arabidopsis thaliana GN=At3g05260 PE=2 SV=1

 Score =  408 bits (1049), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/286 (68%), Positives = 232/286 (81%), Gaps = 18/286 (6%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MASG   FPPQKQE QPG +HVMEPTP+F+S +YKPSNKL GKVALVTGGDSGIG+AV H
Sbjct: 1   MASG---FPPQKQETQPGIQHVMEPTPEFSSSNYKPSNKLHGKVALVTGGDSGIGKAVCH 57

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
           CYALEGA+VAFTYVK +E+KDA+ETL +L E KT +AK+P+ I+ DLGF+ENCKRVV+EV
Sbjct: 58  CYALEGASVAFTYVKGREDKDAEETLRLLHEVKTREAKEPIMIATDLGFEENCKRVVEEV 117

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           VN++G+ID+LVN AA Q++  S+E+IDE RLERVFRTNIFS FF+ +++L+HM EGS+II
Sbjct: 118 VNSFGRIDVLVNCAAEQHEV-SIEDIDEARLERVFRTNIFSQFFLVKYALKHMKEGSSII 176

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTSV     +                 RGLALQL  +GIRVNGVAPGP+WTPLIP+SFS
Sbjct: 177 NTTSVVAYAGNSSLLEYTATKGAIVSFTRGLALQLAPKGIRVNGVAPGPVWTPLIPASFS 236

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EE   QFGSE PMKRA QP+EVAP YVFLACNHCSSY TGQ+LHPN
Sbjct: 237 EEAIKQFGSETPMKRAAQPVEVAPSYVFLACNHCSSYYTGQILHPN 282

May act as a short alcohol-polyol-sugar dehydrogenase possibly related to carbohydrate metabolism and the acquisition of desiccation tolerance. May also be involved in signal transduction.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q75KH3|GRDH_ORYSJ Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2

 Score =  349 bits (896), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 179/296 (60%), Positives = 218/296 (73%), Gaps = 27/296 (9%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MAS  QQFPPQ QE QPGKEH M+P P+     YKP+NKL+ KVA+VTGGDSGIGRAV  
Sbjct: 1   MAS--QQFPPQNQETQPGKEHAMDPRPEAIIQSYKPANKLKDKVAIVTGGDSGIGRAVCL 58

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKT-SDAKDPMAISADLGFDENCKRVVDE 119
           C+ALEGATVAFTYVK QEEKDA+ETL  LR+ +  + AKDPMAI ADLG+D+NC++VVDE
Sbjct: 59  CFALEGATVAFTYVKGQEEKDAEETLRALRDIRARTGAKDPMAIPADLGYDDNCRKVVDE 118

Query: 120 VVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGS- 177
           V  AY G IDILVNNAA QY+  S+ +I E+ LERVFRTNIFS+FFM++H+++ M +   
Sbjct: 119 VAGAYGGAIDILVNNAAEQYERPSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRG 178

Query: 178 -------AIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPI 216
                  +IINT+S+     +                 R LALQL E GIRVNGVAPGPI
Sbjct: 179 GAGAGGCSIINTSSINAYKGNKTLLDYTATKGAIVAFTRALALQLAEEGIRVNGVAPGPI 238

Query: 217 WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           WTPLIP+SF+EE+  QFGS+VPM RAGQP EVAP +VFLA +  +SY++GQ+LH N
Sbjct: 239 WTPLIPASFAEEKVRQFGSQVPMGRAGQPSEVAPSFVFLASDD-ASYMSGQMLHVN 293

May act as a short alcohol-polyol-sugar dehydrogenase possibly related to carbohydrate metabolism and the acquisition of desiccation tolerance. May also be involved in signal transduction.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P80873|GS39_BACSU General stress protein 39 OS=Bacillus subtilis (strain 168) GN=ydaD PE=1 SV=3

 Score =  252 bits (643), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 132/286 (46%), Positives = 180/286 (62%), Gaps = 21/286 (7%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MA+  ++ P Q Q  QPG E  M P+P +   DYK ++KL+GKVAL+TGGDSGIGRAV+ 
Sbjct: 1   MANYPKELPAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALITGGDSGIGRAVSV 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
            YA EGA +A  Y    E +DA+ET + + +    +    + I+ D+G +E C   V++ 
Sbjct: 61  AYAKEGADIAIVY--KDEHEDAEETKKRVEQ----EGVKCLLIAGDVGEEEFCNEAVEKT 114

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           V   G +DILVNNA  Q+   S+++I  E+L R F+TN +S F++T+ ++ ++  GSAII
Sbjct: 115 VKELGGLDILVNNAGEQHPKESIKDITSEQLHRTFKTNFYSQFYLTKKAIDYLKPGSAII 174

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTS+ P   +P                R +A  LV+ GIRVN VAPGPIWTPLIP++F 
Sbjct: 175 NTTSINPYVGNPTLIDYTATKGAINAFTRTMAQALVKDGIRVNAVAPGPIWTPLIPATFP 234

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EE  AQFG + PM R GQP+E   CYV LA +  SSY+TGQ LH N
Sbjct: 235 EETVAQFGQDTPMGRPGQPVEHVGCYVLLASDE-SSYMTGQTLHVN 279

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O07575|YHDF_BACSU Uncharacterized oxidoreductase YhdF OS=Bacillus subtilis (strain 168) GN=yhdF PE=3 SV=1

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/277 (46%), Positives = 173/277 (62%), Gaps = 21/277 (7%)

Query: 10  PQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATV 69
           PQ Q+ QPG E  M P P     DY+ S KL+GKVA++TGGDSGIGRA A  +A EGA +
Sbjct: 13  PQHQDRQPGIESKMNPLPLSEDEDYRGSGKLKGKVAIITGGDSGIGRAAAIAFAKEGADI 72

Query: 70  AFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDI 129
           +  Y+   E  DA+ET    R+    +    + I  D+G + +C++ V + V+ +GK+DI
Sbjct: 73  SILYL--DEHSDAEET----RKRIEKENVRCLLIPGDVGDENHCEQAVQQTVDHFGKLDI 126

Query: 130 LVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL- 188
           LVNNAA Q+   S+  I  E+LE+ FRTNIFS F MT+ +L H+ EG AIINTTS+    
Sbjct: 127 LVNNAAEQHPQDSILNISTEQLEKTFRTNIFSMFHMTKKALPHLQEGCAIINTTSITAYE 186

Query: 189 -------WHSPEA------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS 235
                  + S +       R +A  L ++GIRVN VAPGPIWTPLIP++F EE+  Q G 
Sbjct: 187 GDTALIDYSSTKGAIVSFTRSMAKSLADKGIRVNAVAPGPIWTPLIPATFPEEKVKQHGL 246

Query: 236 EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           + PM R GQP+E A  YV LA +  SSY+TGQ +H N
Sbjct: 247 DTPMGRPGQPVEHAGAYVLLASDE-SSYMTGQTIHVN 282

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P40397|YHXC_BACSU Uncharacterized oxidoreductase YhxC OS=Bacillus subtilis (strain 168) GN=yhxC PE=3 SV=2

 Score =  234 bits (596), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 125/281 (44%), Positives = 176/281 (62%), Gaps = 23/281 (8%)

Query: 6   QQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALE 65
           +  PPQ Q  QPG E++M+P P F     K + KL GK A++TGGDSGIGRAV+  +A E
Sbjct: 7   KTLPPQHQNQQPGFEYLMDPRPVFDKP--KKAKKLEGKTAIITGGDSGIGRAVSVLFAKE 64

Query: 66  GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYG 125
           GA V   Y+   E +DA+ET + + +    +    + I+ D+G +  C  VV +    + 
Sbjct: 65  GANVVIVYL--NEHQDAEETKQYVEK----EGVKCLLIAGDVGDEAFCNDVVGQASQVFP 118

Query: 126 KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV 185
            IDILVNNAA Q+   S+E+I   +L R F+TNIFS F++T+  L H+ +GS+IINT S+
Sbjct: 119 SIDILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTKAVLPHLKKGSSIINTASI 178

Query: 186 EPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA 231
                +                 R L+  LV++GIRVN VAPGPIWTPLIP+SF+ ++  
Sbjct: 179 TAYKGNKTLIDYSATKGAIVTFTRSLSQSLVQQGIRVNAVAPGPIWTPLIPASFAAKDVE 238

Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
            FGS+VPM+R GQP+EVAP Y++LA +  S+Y+TGQ +H N
Sbjct: 239 VFGSDVPMERPGQPVEVAPSYLYLASDD-STYVTGQTIHVN 278

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q10216|YAY8_SCHPO Uncharacterized oxidoreductase C4H3.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.08 PE=3 SV=1

 Score =  198 bits (504), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 109/282 (38%), Positives = 163/282 (57%), Gaps = 25/282 (8%)

Query: 9   PPQKQEAQPGKEHVMEPTPQFTSHD----YKPSNKLRGKVALVTGGDSGIGRAVAHCYAL 64
           P  + +  PGK   ++P P    +     +  S KL  K  L+TGGDSGIG+A A  +A 
Sbjct: 5   PSTQTQKWPGKHADLDPEPSLLRYCDGRVHVGSGKLAEKKTLLTGGDSGIGKAAAVMFAR 64

Query: 65  EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY 124
           EG+ +  + +  +E  DA    E+ R+    + ++       L   +NC+ +VD  +   
Sbjct: 65  EGSDLVISCLP-EERDDA----EVTRDLIEREGRNCWIWEGKLDKSDNCRDLVDFALKKL 119

Query: 125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS 184
           G ID+LVNN A Q  A S+E+ID+E+ +  F+TNIFS F++T+ ++ HM  GS+I+N +S
Sbjct: 120 GWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHMKSGSSIVNCSS 179

Query: 185 VEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES 230
           +      P+               RGL+ Q  + GIRVN VAPGPI+TPL+ S+F +E+ 
Sbjct: 180 INAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPLVSSTFPKEK- 238

Query: 231 AQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
            +   +VP+ R GQP+EVA CY+FLAC+    Y+TGQ LHPN
Sbjct: 239 IELSDQVPLGRMGQPVEVASCYLFLACSD-GGYMTGQTLHPN 279

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P0AG84|YGHA_ECOLI Uncharacterized oxidoreductase YghA OS=Escherichia coli (strain K12) GN=yghA PE=1 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/277 (38%), Positives = 161/277 (58%), Gaps = 22/277 (7%)

Query: 7   QFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG 66
           ++P QKQ   PG +  M P P      Y  S +L+ + ALVTGGDSGIGRA A  YA EG
Sbjct: 15  EYPKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREG 73

Query: 67  ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGK 126
           A VA +Y+  +EE DAQ+  +I+ E      +  + +  DL  ++  + +V E   A G 
Sbjct: 74  ADVAISYLPVEEE-DAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKALGG 128

Query: 127 IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE 186
           +DI+   A  Q     + ++  E+ ++ F  N+F+ F++T+ ++  + +G++II T+S++
Sbjct: 129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188

Query: 187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPL-IPSSFSEEESA 231
               SP               +RGLA Q+ E+GIRVN VAPGPIWT L I    ++++  
Sbjct: 189 AYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP 248

Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
           QFG + PMKRAGQP E+AP YV+LA    SSY+T +V
Sbjct: 249 QFGQQTPMKRAGQPAELAPVYVYLASQE-SSYVTAEV 284

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P0AG85|YGHA_ECO57 Uncharacterized oxidoreductase YghA OS=Escherichia coli O157:H7 GN=yghA PE=3 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/277 (38%), Positives = 161/277 (58%), Gaps = 22/277 (7%)

Query: 7   QFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG 66
           ++P QKQ   PG +  M P P      Y  S +L+ + ALVTGGDSGIGRA A  YA EG
Sbjct: 15  EYPKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREG 73

Query: 67  ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGK 126
           A VA +Y+  +EE DAQ+  +I+ E      +  + +  DL  ++  + +V E   A G 
Sbjct: 74  ADVAISYLPVEEE-DAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKALGG 128

Query: 127 IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE 186
           +DI+   A  Q     + ++  E+ ++ F  N+F+ F++T+ ++  + +G++II T+S++
Sbjct: 129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188

Query: 187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPL-IPSSFSEEESA 231
               SP               +RGLA Q+ E+GIRVN VAPGPIWT L I    ++++  
Sbjct: 189 AYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP 248

Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
           QFG + PMKRAGQP E+AP YV+LA    SSY+T +V
Sbjct: 249 QFGQQTPMKRAGQPAELAPVYVYLASQE-SSYVTAEV 284

Escherichia coli O157:H7 (taxid: 83334)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
224123214	293	predicted protein [Populus trichocarpa]	1.0	0.928	0.741	1e-124
357441633	293	Glucose and ribitol dehydrogenase [Medic	1.0	0.928	0.737	1e-123
388502942	293	unknown [Lotus japonicus]	1.0	0.928	0.730	1e-123
255542606	293	short chain dehydrogenase, putative [Ric	1.0	0.928	0.720	1e-122
388514647	293	unknown [Lotus japonicus]	1.0	0.928	0.723	1e-121
449435679	293	PREDICTED: glucose and ribitol dehydroge	1.0	0.928	0.737	1e-121
449518007	293	PREDICTED: glucose and ribitol dehydroge	1.0	0.928	0.734	1e-120
79366418	335	Rossmann-fold NAD(P)-binding domain-cont	0.963	0.782	0.742	1e-120
75309952	288	RecName: Full=Glucose and ribitol dehydr	0.963	0.909	0.742	1e-120
357512025	293	Glucose and ribitol dehydrogenase-like p	1.0	0.928	0.716	1e-120

>gi|224123214|ref|XP_002319022.1| predicted protein [Populus trichocarpa] gi|222857398|gb|EEE94945.1| predicted protein [Populus trichocarpa]

 Score =  448 bits (1153), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/286 (74%), Positives = 243/286 (84%), Gaps = 14/286 (4%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MASG Q+FPPQKQ +QPGKEHVM+PTPQ+T+ DYKPSNKL+GKVA+VTGGDSGIGRAV  
Sbjct: 1   MASGGQKFPPQKQNSQPGKEHVMDPTPQYTNPDYKPSNKLQGKVAVVTGGDSGIGRAVCR 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
            + +EGATVAFTYVK+QE+KDA +TL++L++ KT+DAKDP+AI  DLGFDENCKRVVDEV
Sbjct: 61  SFVIEGATVAFTYVKAQEDKDADDTLQMLKKHKTADAKDPIAIPVDLGFDENCKRVVDEV 120

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           VNAYG+IDILVNNAA QY+  SVEEIDE+RLE+VFRTNIFS+FFMTRH+L+HM EGS+II
Sbjct: 121 VNAYGRIDILVNNAAEQYECSSVEEIDEQRLEKVFRTNIFSYFFMTRHALKHMKEGSSII 180

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTSV     + +               RGLALQLV RGIRVNGVAPGPIWTPLIP+SF 
Sbjct: 181 NTTSVNAYMGNSQLLDYTSTKGAIVAFIRGLALQLVSRGIRVNGVAPGPIWTPLIPASFK 240

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EEE A FG +VPM+RAGQP EVAP YVFLACNHCSSYITGQVLHPN
Sbjct: 241 EEEVANFGKQVPMQRAGQPAEVAPSYVFLACNHCSSYITGQVLHPN 286

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441633|ref|XP_003591094.1| Glucose and ribitol dehydrogenase [Medicago truncatula] gi|355480142|gb|AES61345.1| Glucose and ribitol dehydrogenase [Medicago truncatula]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/286 (73%), Positives = 242/286 (84%), Gaps = 14/286 (4%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MASG Q+FPPQKQ+ QPGKEHVM+P PQFT  DYKPSNKL+GKVA++TGGDSGIGRAV +
Sbjct: 1   MASGEQKFPPQKQDTQPGKEHVMDPLPQFTCPDYKPSNKLQGKVAVITGGDSGIGRAVCN 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
            ++LEGATVAFTYVK  E+KDA++TLE+LR AK++DAKDPMA++ADLGFDENCK+VVDE+
Sbjct: 61  LFSLEGATVAFTYVKGDEDKDAKDTLEMLRNAKSADAKDPMAVAADLGFDENCKKVVDEI 120

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           VNAYG IDILVNNAA QY+  SVEEIDE RLERVFRTNIFS+FFMTRH+L+HM EGS+II
Sbjct: 121 VNAYGHIDILVNNAAEQYECSSVEEIDESRLERVFRTNIFSYFFMTRHALKHMKEGSSII 180

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTSV     + +               RGL+LQLV +GIRVNGVAPGPIWTPLIP+SF 
Sbjct: 181 NTTSVNAYKGNAKLLDYTSTKGAIVAFTRGLSLQLVSKGIRVNGVAPGPIWTPLIPASFK 240

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EEE+AQFG +VPMKRAGQPIEVAP YVFLA N CSSY TGQVLHPN
Sbjct: 241 EEETAQFGGQVPMKRAGQPIEVAPSYVFLASNQCSSYFTGQVLHPN 286

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502942|gb|AFK39537.1| unknown [Lotus japonicus]

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 209/286 (73%), Positives = 241/286 (84%), Gaps = 14/286 (4%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MASG Q+FPPQKQE QPGKEH + P PQF S +YKPSNKL+GK+AL+TGGDSGIGRAV +
Sbjct: 1   MASGGQKFPPQKQETQPGKEHALNPAPQFASPEYKPSNKLQGKIALITGGDSGIGRAVCN 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
            +ALEGATV FTYV+ QE+KDA++T+E+++ AKT+DAKDP+AI AD GFDENCKRVVDE 
Sbjct: 61  LFALEGATVIFTYVEGQEDKDARDTIEMIKRAKTADAKDPLAIPADFGFDENCKRVVDEA 120

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           VNAYG+IDILVNNAA QY+ GSVEEIDE RLERVFRTNIFS+FF+TRH+L+HM EGS+II
Sbjct: 121 VNAYGRIDILVNNAAEQYECGSVEEIDEPRLERVFRTNIFSYFFLTRHALKHMKEGSSII 180

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTSV      P                RGL+LQLV +GIRVNGVAPGPIWTPLIP+SF 
Sbjct: 181 NTTSVNAYKGHPTLLDYTATKGAIVAFTRGLSLQLVSKGIRVNGVAPGPIWTPLIPASFK 240

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EEE+AQFG++VPMKRAGQP+EVAP YVFLACN CSSYITGQVLHPN
Sbjct: 241 EEETAQFGADVPMKRAGQPVEVAPSYVFLACNQCSSYITGQVLHPN 286

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542606|ref|XP_002512366.1| short chain dehydrogenase, putative [Ricinus communis] gi|223548327|gb|EEF49818.1| short chain dehydrogenase, putative [Ricinus communis]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/286 (72%), Positives = 244/286 (85%), Gaps = 14/286 (4%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MASG Q FPPQKQ +QPGKEH M+P PQ+   DYKPS+KLRGKVALVTGGDSGIGRAV H
Sbjct: 1   MASGGQSFPPQKQGSQPGKEHQMDPIPQYARSDYKPSDKLRGKVALVTGGDSGIGRAVCH 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
            + LEGATVAFTYVK QE++DA++T+++L+++KT DAK+P+AI+ADLG+DENCK+V+DEV
Sbjct: 61  SFVLEGATVAFTYVKKQEDRDAEDTIQLLKKSKTVDAKEPIAIAADLGYDENCKKVIDEV 120

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           VNA+G+IDILVNNAA Q+KAGSV+EIDEERLERVFRTN+FS+FF TRH+L+HM EGS+II
Sbjct: 121 VNAFGRIDILVNNAAEQHKAGSVQEIDEERLERVFRTNMFSYFFATRHALKHMKEGSSII 180

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTS+     + +               RGLAL+LV +GIRVNGVAPGPIWTPLIP+SF 
Sbjct: 181 NTTSINAYKGNAKLLDYTATKGAIVAFTRGLALELVNKGIRVNGVAPGPIWTPLIPASFD 240

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EEE A FG EVPM+RAGQP+EVAPCYVFLACNHCSSYITGQVLHPN
Sbjct: 241 EEEVANFGKEVPMQRAGQPVEVAPCYVFLACNHCSSYITGQVLHPN 286

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514647|gb|AFK45385.1| unknown [Lotus japonicus]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/286 (72%), Positives = 244/286 (85%), Gaps = 14/286 (4%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MASG Q+FPPQKQ+AQPGKEHVM+P PQFT+ DYKPSNKL+GK+A++TGGDSGIGRAV +
Sbjct: 1   MASGEQKFPPQKQDAQPGKEHVMDPVPQFTNPDYKPSNKLQGKIAVITGGDSGIGRAVCN 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
            +ALEGATVAFTYVK  E+KDA++TLE++++AKT+ AKDP+AI ADLGFDENCK+VVDEV
Sbjct: 61  LFALEGATVAFTYVKGSEDKDARDTLEMIKKAKTAGAKDPLAIPADLGFDENCKKVVDEV 120

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           V AYG+IDIL+NNAA QY+  SVEEIDE+RLERVFRTNIFS+FFMTRH+L+HM EGS+II
Sbjct: 121 VKAYGQIDILINNAAEQYECASVEEIDEKRLERVFRTNIFSYFFMTRHALKHMKEGSSII 180

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTSV     + +               RGL+LQLV +GIRVNGVAPGPIWTPLIP+SF 
Sbjct: 181 NTTSVNAYKGNAKLLDYTSTKGAIVAFTRGLSLQLVSKGIRVNGVAPGPIWTPLIPASFK 240

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EEE++QFG +VPMKRAGQPIEVAP YVFLACN C  YI+GQVLHPN
Sbjct: 241 EEETSQFGGQVPMKRAGQPIEVAPSYVFLACNACFFYISGQVLHPN 286

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435679|ref|XP_004135622.1| PREDICTED: glucose and ribitol dehydrogenase homolog 1-like [Cucumis sativus]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/286 (73%), Positives = 233/286 (81%), Gaps = 14/286 (4%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MA+  Q FPPQKQ+ QPGKEHVM+P+PQFTS  YKPSNKL GKVALVTGGDSGIGRAV H
Sbjct: 1   MATEGQTFPPQKQQTQPGKEHVMDPSPQFTSSQYKPSNKLLGKVALVTGGDSGIGRAVCH 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
           C+ALEGATVAFTYVK QE+KDA++ LEILRE +  DAK P+A+ ADLGFDE+CKRVVDEV
Sbjct: 61  CFALEGATVAFTYVKKQEDKDAKDMLEILRECQAPDAKQPIAVGADLGFDEDCKRVVDEV 120

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           V AYG+IDILVN AA Q+K  SVEEIDE+R+ERVFRTNIFS FFM RH+L+HM EGS+II
Sbjct: 121 VKAYGRIDILVNAAAEQHKTNSVEEIDEQRIERVFRTNIFSQFFMVRHALKHMKEGSSII 180

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTSV      P+               RGLALQL  RGIRVNGVAPGPIWTPLIP+SF 
Sbjct: 181 NTTSVVAYKGCPQLLDYSATKGAIVAFTRGLALQLATRGIRVNGVAPGPIWTPLIPASFD 240

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
            EE   FGSEVPMKRAGQPIEVAP YVFLACNHCSSY TGQ+LHPN
Sbjct: 241 NEEIESFGSEVPMKRAGQPIEVAPSYVFLACNHCSSYFTGQILHPN 286

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449518007|ref|XP_004166035.1| PREDICTED: glucose and ribitol dehydrogenase homolog 1-like [Cucumis sativus]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/286 (73%), Positives = 231/286 (80%), Gaps = 14/286 (4%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           MA+  Q FPPQKQ+ QPGKEHVM+P+PQFTS  YKPSNKL GKVALVTGGDSGIGRAV H
Sbjct: 1   MATEGQTFPPQKQQTQPGKEHVMDPSPQFTSSQYKPSNKLLGKVALVTGGDSGIGRAVCH 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
           C+ALEG TVAFTYVK QE+KDA++ LEILRE +  DAK P+A+ ADLGFDE CKRVVDEV
Sbjct: 61  CFALEGVTVAFTYVKKQEDKDAKDMLEILRECQAPDAKQPIAVGADLGFDEECKRVVDEV 120

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           V AYG+IDILVN AA Q+K  SVEEIDE+R+ERVFRTNIFS FFM RH+L+HM EGS+II
Sbjct: 121 VKAYGRIDILVNAAAEQHKTNSVEEIDEQRIERVFRTNIFSQFFMVRHALKHMKEGSSII 180

Query: 181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTSV      P+               RGLALQL  RGIRVNGVAPGPIWTPLIP+SF 
Sbjct: 181 NTTSVVAYKGCPQLLDYSATKGAIVAFTRGLALQLATRGIRVNGVAPGPIWTPLIPASFD 240

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
            EE   FGSEVPMKRAGQPIEVAP YVFLACNHCSSY TGQ+LHPN
Sbjct: 241 NEEIESFGSEVPMKRAGQPIEVAPSYVFLACNHCSSYFTGQILHPN 286

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79366418|ref|NP_564670.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332195037|gb|AEE33158.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/276 (74%), Positives = 235/276 (85%), Gaps = 14/276 (5%)

Query: 11  QKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVA 70
           QKQ AQPGKEHVME +PQF+S DY+PSNKLRGKVAL+TGGDSGIGRAV +C+A EGATVA
Sbjct: 53  QKQHAQPGKEHVMESSPQFSSSDYQPSNKLRGKVALITGGDSGIGRAVGYCFASEGATVA 112

Query: 71  FTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDIL 130
           FTYVK QEEKDAQETL++L+E KTSD+K+P+AI  DLGFDENCKRVVDEVVNA+G+ID+L
Sbjct: 113 FTYVKGQEEKDAQETLQMLKEVKTSDSKEPIAIPTDLGFDENCKRVVDEVVNAFGRIDVL 172

Query: 131 VNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH 190
           +NNAA QY++ ++EEIDE RLERVFRTNIFS+FF+TRH+L+HM EGS+IINTTSV     
Sbjct: 173 INNAAEQYESSTIEEIDEPRLERVFRTNIFSYFFLTRHALKHMKEGSSIINTTSVNAYKG 232

Query: 191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE 236
           +                 RGLALQL E+GIRVNGVAPGPIWTPLIP+SF+EE+   FGSE
Sbjct: 233 NASLLDYTATKGAIVAFTRGLALQLAEKGIRVNGVAPGPIWTPLIPASFNEEKIKNFGSE 292

Query: 237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           VPMKRAGQPIEVAP YVFLACNHCSSY TGQVLHPN
Sbjct: 293 VPMKRAGQPIEVAPSYVFLACNHCSSYFTGQVLHPN 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75309952|sp|Q9FZ42.1|GRDH1_ARATH RecName: Full=Glucose and ribitol dehydrogenase homolog 1 gi|9857515|gb|AAG00870.1|AC064840_1 Highly similar to dehydrogenase/reductases [Arabidopsis thaliana] gi|13937155|gb|AAK50071.1|AF372931_1 At1g54870/F14C21_16 [Arabidopsis thaliana] gi|21700875|gb|AAM70561.1| At1g54870/F14C21_16 [Arabidopsis thaliana]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/276 (74%), Positives = 235/276 (85%), Gaps = 14/276 (5%)

Query: 11  QKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVA 70
           QKQ AQPGKEHVME +PQF+S DY+PSNKLRGKVAL+TGGDSGIGRAV +C+A EGATVA
Sbjct: 6   QKQHAQPGKEHVMESSPQFSSSDYQPSNKLRGKVALITGGDSGIGRAVGYCFASEGATVA 65

Query: 71  FTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDIL 130
           FTYVK QEEKDAQETL++L+E KTSD+K+P+AI  DLGFDENCKRVVDEVVNA+G+ID+L
Sbjct: 66  FTYVKGQEEKDAQETLQMLKEVKTSDSKEPIAIPTDLGFDENCKRVVDEVVNAFGRIDVL 125

Query: 131 VNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH 190
           +NNAA QY++ ++EEIDE RLERVFRTNIFS+FF+TRH+L+HM EGS+IINTTSV     
Sbjct: 126 INNAAEQYESSTIEEIDEPRLERVFRTNIFSYFFLTRHALKHMKEGSSIINTTSVNAYKG 185

Query: 191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE 236
           +                 RGLALQL E+GIRVNGVAPGPIWTPLIP+SF+EE+   FGSE
Sbjct: 186 NASLLDYTATKGAIVAFTRGLALQLAEKGIRVNGVAPGPIWTPLIPASFNEEKIKNFGSE 245

Query: 237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           VPMKRAGQPIEVAP YVFLACNHCSSY TGQVLHPN
Sbjct: 246 VPMKRAGQPIEVAPSYVFLACNHCSSYFTGQVLHPN 281

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512025|ref|XP_003626301.1| Glucose and ribitol dehydrogenase-like protein [Medicago truncatula] gi|87240540|gb|ABD32398.1| Short-chain dehydrogenase/reductase SDR [Medicago truncatula] gi|355501316|gb|AES82519.1| Glucose and ribitol dehydrogenase-like protein [Medicago truncatula]

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/286 (71%), Positives = 241/286 (84%), Gaps = 14/286 (4%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
           M +G Q+ PPQKQ+ QPGKEH M PTPQFT  DYKP+NKL+GK+A+VTGGDSGIGRAV +
Sbjct: 1   MTTGGQKIPPQKQDTQPGKEHAMNPTPQFTCPDYKPANKLQGKIAVVTGGDSGIGRAVCN 60

Query: 61  CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
            +ALEGATV FTYVK  E+KDA++TL++L+ AKT++AKDPMAI ADLGFDENCKRV+DE+
Sbjct: 61  LFALEGATVIFTYVKGHEDKDARDTLDMLKMAKTANAKDPMAIPADLGFDENCKRVIDEI 120

Query: 121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
           +NAYG+IDILVNNAA QY+ GSVEEIDE RLERVFRTNIFS+FFMTRH+L+HM EGS II
Sbjct: 121 INAYGRIDILVNNAAEQYECGSVEEIDEPRLERVFRTNIFSYFFMTRHALKHMKEGSNII 180

Query: 181 NTTSVEPL--------WHSPEA------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
           NTTSV           + S +       R L+LQLV +GIRVNGVAPGPIWTPLIP+SF+
Sbjct: 181 NTTSVNAYKGNSTLIDYTSTKGAIVAFTRALSLQLVSKGIRVNGVAPGPIWTPLIPASFN 240

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EE++AQFGS+VPMKRAGQP+EVAP +VFLA N CSSYITGQVLHPN
Sbjct: 241 EEKTAQFGSDVPMKRAGQPVEVAPSFVFLASNQCSSYITGQVLHPN 286

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
TAIR|locus:2096284	289	AT3G05260 [Arabidopsis thalian	0.985	0.927	0.688	5.4e-102
TIGR_CMR|BA_0748	288	BA_0748 "oxidoreductase, short	0.944	0.892	0.482	5.5e-61
ASPGD|ASPL0000013842	302	AN3679 [Emericella nidulans (t	0.937	0.844	0.444	1.2e-51
POMBASE|SPAC4H3.08	286	SPAC4H3.08 "3-hydroxyacyl-CoA	0.944	0.898	0.386	3.8e-46
ASPGD|ASPL0000046791	296	AN9002 [Emericella nidulans (t	0.974	0.895	0.414	2.1e-45
UNIPROTKB|P0AG84	294	yghA "predicted glutathionylsp	0.937	0.867	0.389	8.1e-44
DICTYBASE|DDB_G0272154	301	DDB_G0272154 "short-chain dehy	0.937	0.847	0.408	7.3e-43
WB|WBGene00000977	279	dhs-14 [Caenorhabditis elegans	0.647	0.630	0.291	1.9e-26
TIGR_CMR|BA_1330	247	BA_1330 "3-oxoacyl-[acyl-carri	0.823	0.906	0.348	1.4e-25
UNIPROTKB|Q9X248	246	fabG "3-oxoacyl-[acyl-carrier-	0.808	0.894	0.358	1.2e-24

TAIR|locus:2096284 AT3G05260 [Arabidopsis thaliana (taxid:3702)]

 Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
 Identities = 197/286 (68%), Positives = 234/286 (81%)

Query:     1 MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
             MASG   FPPQKQE QPG +HVMEPTP+F+S +YKPSNKL GKVALVTGGDSGIG+AV H
Sbjct:     1 MASG---FPPQKQETQPGIQHVMEPTPEFSSSNYKPSNKLHGKVALVTGGDSGIGKAVCH 57

Query:    61 CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV 120
             CYALEGA+VAFTYVK +E+KDA+ETL +L E KT +AK+P+ I+ DLGF+ENCKRVV+EV
Sbjct:    58 CYALEGASVAFTYVKGREDKDAEETLRLLHEVKTREAKEPIMIATDLGFEENCKRVVEEV 117

Query:   121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII 180
             VN++G+ID+LVN AA Q++  S+E+IDE RLERVFRTNIFS FF+ +++L+HM EGS+II
Sbjct:   118 VNSFGRIDVLVNCAAEQHEV-SIEDIDEARLERVFRTNIFSQFFLVKYALKHMKEGSSII 176

Query:   181 NTTSVEP-------LWHSPE-------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
             NTTSV         L ++          RGLALQL  +GIRVNGVAPGP+WTPLIP+SFS
Sbjct:   177 NTTSVVAYAGNSSLLEYTATKGAIVSFTRGLALQLAPKGIRVNGVAPGPVWTPLIPASFS 236

Query:   227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
             EE   QFGSE PMKRA QP+EVAP YVFLACNHCSSY TGQ+LHPN
Sbjct:   237 EEAIKQFGSETPMKRAAQPVEVAPSYVFLACNHCSSYYTGQILHPN 282

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TIGR_CMR|BA_0748 BA_0748 "oxidoreductase, short chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 134/278 (48%), Positives = 178/278 (64%)

Query:     9 PPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGAT 68
             P Q Q  QPG E +M P PQF   +YK S KL+GK  L+TGGDSGIGRAV+  +A EGA 
Sbjct:    11 PAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGAN 70

Query:    69 VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKID 128
             +A  Y+   EE DA ET + + +    +    + +  DL  +++CK +V E V   G ++
Sbjct:    71 IAIAYL--DEEGDANETKQYVEK----EGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 124

Query:   129 ILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV--- 185
             ILVNN A QY    +E I  E+LE+ FR NIFS+F +T+ +L H+ +G  IINT S+   
Sbjct:   125 ILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAY 184

Query:   186 ---EPLWHSPEARG--------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG 234
                E L      +G        L+  LV++GIRVNGVAPGPIWTPLIPSSF E++ +QFG
Sbjct:   185 EGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG 244

Query:   235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
             S VPM+R GQP E+AP YV+LA +  SSY+TGQ++H N
Sbjct:   245 SNVPMQRPGQPYELAPAYVYLASSD-SSYVTGQMIHVN 281

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

ASPGD|ASPL0000013842 AN3679 [Emericella nidulans (taxid:162425)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 125/281 (44%), Positives = 169/281 (60%)

Query:    10 PQKQEAQPGKEHVME-PTP---QFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALE 65
             P +Q  +PG +  ME P P   Q  S D + + KL GK A++TGGDSGIGRAVA  +A+E
Sbjct:    23 PVQQMKKPGLQSQMEKPQPTSTQIPSED-QAAGKLLGKKAIITGGDSGIGRAVAILFAME 81

Query:    66 GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYG 125
             GA+   TY+  +EE+DAQET   + EA     +    ++ DL   ENCK+VV+  +   G
Sbjct:    82 GASSLITYLP-EEEEDAQETKRRVEEA----GQKCYLLATDLRRKENCKKVVETALEKLG 136

Query:   126 KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV 185
              IDILVNNA  Q     + ++DE + E  F TNI   F+++++++ H+  GS+IIN  SV
Sbjct:   137 GIDILVNNAGTQTMLPDISDLDESQWESTFDTNIHPVFYLSKYTMPHLKSGSSIINCASV 196

Query:   186 EPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA 231
              P    P+               RGL+ Q   +GIRVN V PGP+WTPLIP++ + E   
Sbjct:   197 NPYIGRPDLLDYTSTKGAMVAFTRGLSNQQCSKGIRVNAVCPGPVWTPLIPATMTTEAIE 256

Query:   232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
             QF S  PM RAGQP E+A C+VFLA    SS+I+GQ LHPN
Sbjct:   257 QF-SGTPMGRAGQPSEIATCFVFLASQD-SSFISGQCLHPN 295

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

POMBASE|SPAC4H3.08 SPAC4H3.08 "3-hydroxyacyl-CoA dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 109/282 (38%), Positives = 165/282 (58%)

Query:     9 PPQKQEAQPGKEHVMEPTPQFTSH-D---YKPSNKLRGKVALVTGGDSGIGRAVAHCYAL 64
             P  + +  PGK   ++P P    + D   +  S KL  K  L+TGGDSGIG+A A  +A 
Sbjct:     5 PSTQTQKWPGKHADLDPEPSLLRYCDGRVHVGSGKLAEKKTLLTGGDSGIGKAAAVMFAR 64

Query:    65 EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY 124
             EG+ +  + +  +E  DA+ T +++      + ++       L   +NC+ +VD  +   
Sbjct:    65 EGSDLVISCLP-EERDDAEVTRDLIER----EGRNCWIWEGKLDKSDNCRDLVDFALKKL 119

Query:   125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS 184
             G ID+LVNN A Q  A S+E+ID+E+ +  F+TNIFS F++T+ ++ HM  GS+I+N +S
Sbjct:   120 GWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHMKSGSSIVNCSS 179

Query:   185 VEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES 230
             +      P+               RGL+ Q  + GIRVN VAPGPI+TPL+ S+F +E+ 
Sbjct:   180 INAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPLVSSTFPKEK- 238

Query:   231 AQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
              +   +VP+ R GQP+EVA CY+FLAC+    Y+TGQ LHPN
Sbjct:   239 IELSDQVPLGRMGQPVEVASCYLFLACSD-GGYMTGQTLHPN 279

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISO

GO:0004300 "enoyl-CoA hydratase activity" evidence=ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006631 "fatty acid metabolic process" evidence=ISS

GO:0006635 "fatty acid beta-oxidation" evidence=ISO

GO:0033554 "cellular response to stress" evidence=IEP

ASPGD|ASPL0000046791 AN9002 [Emericella nidulans (taxid:162425)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 122/294 (41%), Positives = 166/294 (56%)

Query:     1 MASGNQQFPPQKQEAQ--PGKEHVMEPTPQFTS-------HDYKPSNKLRGKVALVTGGD 51
             MA  N    P+  + Q  PG E  M+P  + T         DYK S KL+GK AL+TGGD
Sbjct:     4 MAKDNTFQAPESAQTQNTPGLESKMQPASEATKLETSDGIKDYKGSGKLQGKKALITGGD 63

Query:    52 SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE 111
             SGIGR+VA  YA EGA +   Y+  +EE DAQET  ++ EA   + +  + +S DL    
Sbjct:    64 SGIGRSVAALYAKEGADITIVYLPVEEE-DAQETKRLV-EA---EGRQCLLLSGDLRDRG 118

Query:   112 NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLR 171
              CK+ VD  V  YG I+ILVNNA+ Q+    + +I+ + +  VF+TNI   F MT+ SL 
Sbjct:   119 FCKQAVDSHVQKYGHINILVNNASQQFSCPDLAQINLDTVTDVFQTNIIQMFAMTKFSLP 178

Query:   172 HMNEGSAIINTTSVEPL--------WHSPEA------RGLALQLVERGIRVNGVAPGPIW 217
             HM++G +IIN TSV           + S +       R  ALQL+ +GIRVN VAPG  +
Sbjct:   179 HMSKGDSIINNTSVTAFRGTGSMVDYASTKGAIVGFTRSAALQLIPKGIRVNAVAPGSTY 238

Query:   218 TPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP 271
             TP+   +   E+   + S  P+ R GQP EVA  +VFLA +  S +  GQ+LHP
Sbjct:   239 TPIQVDTRDAEQMQGWASSKPLGRPGQPSEVATSFVFLASSDASLFY-GQILHP 291

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|P0AG84 yghA "predicted glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domain" [Escherichia coli K-12 (taxid:83333)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 108/277 (38%), Positives = 161/277 (58%)

Query:     7 QFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG 66
             ++P QKQ   PG +  M P P      Y  S +L+ + ALVTGGDSGIGRA A  YA EG
Sbjct:    15 EYPKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREG 73

Query:    67 ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGK 126
             A VA +Y+  +EE DAQ+  +I+ E      +  + +  DL  ++  + +V E   A G 
Sbjct:    74 ADVAISYLPVEEE-DAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKALGG 128

Query:   127 IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE 186
             +DI+   A  Q     + ++  E+ ++ F  N+F+ F++T+ ++  + +G++II T+S++
Sbjct:   129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188

Query:   187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPL-IPSSFSEEESA 231
                 SP               +RGLA Q+ E+GIRVN VAPGPIWT L I    ++++  
Sbjct:   189 AYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP 248

Query:   232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
             QFG + PMKRAGQP E+AP YV+LA    SSY+T +V
Sbjct:   249 QFGQQTPMKRAGQPAELAPVYVYLASQE-SSYVTAEV 284

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

DICTYBASE|DDB_G0272154 DDB_G0272154 "short-chain dehydrogenase/reductase (SDR) family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 119/291 (40%), Positives = 162/291 (55%)

Query:     8 FPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGA 67
             F  Q+Q+  PG +  M P P      YK +N+LRG+  LVTGGDSGIGRAV      EGA
Sbjct:     8 FQKQQQDV-PGVQSEMNPVPDCGEETYKGNNRLRGRRVLVTGGDSGIGRAVTIAMFREGA 66

Query:    68 TVAFTYVKSQEEKDAQETLEIL--REAK------------TSDAKDPMAISADLGFDENC 113
              V  +Y+ S E+KDA ++L+ L  +E K            T   K  M I  DL  ++ C
Sbjct:    67 DVCISYLPS-EKKDA-DSLKCLLEKEIKNTSGGGSGGGTTTCGGKFEM-IQGDLTCEKFC 123

Query:   114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM 173
             K +V+E  N  G +D LV  A  Q     + EI  E+L   F+ N+FS F + + +L H+
Sbjct:   124 KDLVEETKNRLGGLDTLVLVAGKQCAKNCITEITTEQLMETFQVNVFSMFHIVKAALPHL 183

Query:   174 NEGSAIINTTSVEPLWHSP------EARG--------LALQLVERGIRVNGVAPGPIWTP 219
             ++GS I  TTS+E    SP       ++G        L+ Q+  RGIRVN VAPGP+WTP
Sbjct:   184 SKGSTITTTTSIEAFSGSPFLLDYATSKGAIVSFTQSLSKQVAHRGIRVNSVAPGPVWTP 243

Query:   220 L-IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA-CNHCSSYITGQV 268
             + I   + +++ + FG   PM RAGQP EVAP YVFLA C+  S+Y TG +
Sbjct:   244 IEISGGYPQDKLSTFGKNTPMGRAGQPSEVAPMYVFLASCD--STYCTGDI 292

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

WB|WBGene00000977 dhs-14 [Caenorhabditis elegans (taxid:6239)]

 Score = 200 (75.5 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
 Identities = 58/199 (29%), Positives = 103/199 (51%)

Query:    39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
             +  GKVALVTG  +GIGRA A   A EGA V  T   +   ++ ++  EIL+     D  
Sbjct:     3 RFSGKVALVTGSSNGIGRATAVLLAQEGAKVTITGRNADRLEETRQ--EILKSGVPED-- 58

Query:    99 DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK--AGSVE-EIDEERLERVF 155
               ++I+ DL  ++    +V+  +  +G++DILVNNA   +    G V  + D    +R+ 
Sbjct:    59 HVLSIATDLATEKGQDELVNSTIQKFGRLDILVNNAGAAFNDDQGRVGVDQDVSVYDRIM 118

Query:   156 RTNIFSHFFMTRHSLRHMNEGSA-IINTTSV------EP--LWHSPE-------ARGLAL 199
             + N+ S   +T+ +  H+ +    ++N +S+      +P  ++++          R  A+
Sbjct:   119 QINMRSVVTLTQKAKEHLVKAKGEVVNVSSIGAGPQAQPTFMYYAMSKAALDQYTRSAAI 178

Query:   200 QLVERGIRVNGVAPGPIWT 218
              L++ G+RVN V+PG + T
Sbjct:   179 DLIQYGVRVNSVSPGAVVT 197

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008667 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity" evidence=IEA

GO:0009239 "enterobactin biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

TIGR_CMR|BA_1330 BA_1330 "3-oxoacyl-[acyl-carrier protein] reductase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 87/250 (34%), Positives = 134/250 (53%)

Query:    39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
             +L GKVA+VTGG  GIG+A+    A EGA V   Y  S   K+A E L  + E    +  
Sbjct:     3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSS---KEAAENL--VNELG-KEGH 56

Query:    99 DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             D  A+ AD+   E+  R+V+E VN +GK+DILVNNA +  +  + ++++ E  ERV   N
Sbjct:    57 DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGIT-RDRTFKKLNREDWERVIDVN 115

Query:   159 IFSHFFMTRHSLRHMNEGSA--IINTTSV--------EPLWHSPEA------RGLALQLV 202
             + S F  T   L ++ E     II+ +S+        +  + + +A      + LAL+L 
Sbjct:   116 LSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA 175

Query:   203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             +  + VN + PG I T ++ +   EE   +  +++P KR GQ  E+A   V+L C    +
Sbjct:   176 KTNVTVNAICPGFIDTEMV-AEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYL-CRD-GA 232

Query:   263 YITGQVLHPN 272
             YITGQ L+ N
Sbjct:   233 YITGQQLNIN 242

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|Q9X248 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Thermotoga maritima MSB8 (taxid:243274)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 89/248 (35%), Positives = 132/248 (53%)

Query:    39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
             +L GKV L+TG  SGIG+A    +A EGATV    + S+E  D+     +++EA+    K
Sbjct:     2 RLEGKVCLITGAASGIGKATTLLFAQEGATVIAGDI-SKENLDS-----LVKEAEGLPGK 55

Query:    99 -DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              DP  ++     D+  K VV++VV  YG+ID+LVNNA +   A  V  + EE  + V   
Sbjct:    56 VDPYVLNVT-DRDQ-IKEVVEKVVQKYGRIDVLVNNAGITRDALLVR-MKEEDWDAVINV 112

Query:   158 NIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSP-------EARGL-------ALQL 201
             N+   F +T+  + +M      +I+N +SV  ++ +P          G+       A +L
Sbjct:   113 NLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKEL 172

Query:   202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
               R IRVN VAPG I TP+      E+      S +P+ R G+P EVA   +FLA +  S
Sbjct:   173 AGRNIRVNAVAPGFIETPMT-EKLPEKARETALSRIPLGRFGKPEEVAQVILFLASDE-S 230

Query:   262 SYITGQVL 269
             SY+TGQV+
Sbjct:   231 SYVTGQVI 238

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.328	0.8272	0.9072	yes	no
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3508	0.8088	0.8943	yes	no
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3253	0.8088	0.9016	yes	no
Q75KH3	GRDH_ORYSJ	1, ., 1, ., 1, ., -	0.6047	0.9889	0.8966	yes	no
P80873	GS39_BACSU	1, ., -, ., -, ., -	0.4615	0.9742	0.9265	yes	no
Q5KTS5	GRDH_DAUCA	1, ., 1, ., 1, ., -	0.7003	0.9889	0.9243	N/A	no
Q9FZ42	GRDH1_ARATH	1, ., 1, ., 1, ., -	0.7427	0.9632	0.9097	no	no
Q10216	YAY8_SCHPO	1, ., -, ., -, ., -	0.3865	0.9448	0.8986	yes	no
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.3132	0.8088	0.9090	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XIII1038 hypothetical protein (293 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	272
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-138
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-116
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	6e-73
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-67
cd05233	234	cd05233, SDR_c, classical (c) SDRs	1e-63
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	6e-62
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-59
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-55
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-49
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-49
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-49
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-49
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-49
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-48
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-46
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-46
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-43
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-42
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-41
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	8e-41
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-40
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-40
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	6e-40
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	7e-40
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-39
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	8e-39
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	7e-38
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-37
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-37
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-37
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-37
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-37
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-37
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	9e-37
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-36
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	6e-36
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	6e-35
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	7e-35
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-34
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-34
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-34
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	5e-34
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	9e-34
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-33
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-32
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-32
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	1e-32
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-32
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	4e-32
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	6e-32
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	9e-32
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-31
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-31
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-31
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-30
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-30
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-30
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-30
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	5e-30
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-29
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-29
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-29
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-29
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	3e-29
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-28
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	5e-28
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-28
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-27
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-27
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-27
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-27
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-27
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	5e-27
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	6e-27
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	1e-26
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-26
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-26
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-26
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-26
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-26
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-26
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-26
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-26
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-26
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-26
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	3e-26
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	4e-26
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	4e-26
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-26
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	5e-26
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	9e-26
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-25
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-25
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	3e-25
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-25
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	5e-25
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	6e-25
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-25
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	7e-25
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	8e-25
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-24
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-24
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-24
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	8e-24
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-24
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-23
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-23
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-23
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-23
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-23
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	6e-23
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	7e-23
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-22
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-22
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-22
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-22
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	5e-22
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	9e-22
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-21
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-21
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-21
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-21
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-21
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	4e-21
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	6e-21
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-21
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	6e-21
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	7e-21
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	8e-21
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-20
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-20
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-20
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-20
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	6e-20
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	6e-20
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	7e-20
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	8e-20
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	8e-20
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-19
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-19
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-19
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-19
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-19
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	5e-19
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-19
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-19
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	6e-19
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	6e-19
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	7e-19
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	7e-19
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	8e-19
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	9e-19
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-18
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-18
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-18
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-18
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	3e-18
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	4e-18
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	9e-18
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-17
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-17
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-17
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-17
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	4e-17
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-17
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	8e-17
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	9e-17
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-16
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-16
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-16
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	3e-16
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	6e-16
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-15
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-15
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-15
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-15
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	5e-15
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	5e-15
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	5e-15
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-14
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-14
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-14
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-14
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-14
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	7e-14
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	1e-13
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-13
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-13
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	3e-13
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	3e-13
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	5e-13
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	6e-13
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	8e-13
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-12
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-12
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	9e-12
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	1e-11
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-11
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-11
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-11
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-11
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	3e-11
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	9e-11
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	1e-10
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-10
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	2e-10
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	3e-10
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	3e-10
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-10
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-10
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	5e-10
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	5e-10
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-10
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-09
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-09
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	2e-09
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-09
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-09
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-09
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	4e-09
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	5e-09
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	6e-09
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	7e-09
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	8e-09
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	2e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-08
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	7e-08
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-07
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-07
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-07
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	2e-07
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-07
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	3e-07
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	5e-07
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	8e-07
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	9e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	1e-06
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-06
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	2e-06
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	5e-06
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	5e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	6e-06
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-05
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	1e-05
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	3e-05
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	5e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	5e-05
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	7e-05
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	1e-04
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	1e-04
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	1e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	6e-04
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	6e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	7e-04
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	0.001
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	0.001
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	0.001
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	0.001
pfam08659	181	pfam08659, KR, KR domain	0.004

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  388 bits (1000), Expect = e-138
 Identities = 148/270 (54%), Positives = 183/270 (67%), Gaps = 20/270 (7%)

Query: 17  PGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS 76
           PG E  M+P P F    YK S KL+GK AL+TGGDSGIGRAVA  +A EGA VA  Y+  
Sbjct: 1   PGIEAKMDPLPDFGEKSYKGSGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYL-P 59

Query: 77  QEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV 136
           +EE DA+ET +++ E         + I  DLG +  C+ +V EVV  +GK+DILVNNAA 
Sbjct: 60  EEEDDAEETKKLIEEEGRKC----LLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAY 115

Query: 137 QYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--- 193
           Q+   S+E+I  E+LE+ FRTNIFS F++T+ +L H+ +GS+IINTTSV     SP    
Sbjct: 116 QHPQESIEDITTEQLEKTFRTNIFSMFYLTKAALPHLKKGSSIINTTSVTAYKGSPHLLD 175

Query: 194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRA 242
                       RGL+LQL E+GIRVN VAPGPIWTPLIPSSF EE+ ++FGS+VPM RA
Sbjct: 176 YAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGPIWTPLIPSSFPEEKVSEFGSQVPMGRA 235

Query: 243 GQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           GQP EVAP YVFLA     SY+TGQVLH N
Sbjct: 236 GQPAEVAPAYVFLASQDS-SYVTGQVLHVN 264

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  333 bits (857), Expect = e-116
 Identities = 142/290 (48%), Positives = 182/290 (62%), Gaps = 25/290 (8%)

Query: 1   MASGNQQ----FPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGR 56
            A   Q+     P Q Q  QPG E +M P PQF + +YK S KL+GKVAL+TGGDSGIGR
Sbjct: 1   QAGPRQKPFPPMPAQHQNKQPGIESLMNPLPQFEAPNYKGSGKLKGKVALITGGDSGIGR 60

Query: 57  AVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV 116
           AVA  +A EGA +A  Y+   E +DA ET    ++    +    + I  D+  +  CK  
Sbjct: 61  AVAVLFAKEGADIAIVYL--DEHEDANET----KQRVEKEGVKCLLIPGDVSDEAFCKDA 114

Query: 117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG 176
           V+E V   G++DILVNNAA QY   S+E+I  E+L++ F+TNI+S+F MT+ +L H+ +G
Sbjct: 115 VEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG 174

Query: 177 SAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIP 222
           SAIINT S+     +                 R LA  LV++GIRVN VAPGPIWTPLIP
Sbjct: 175 SAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIP 234

Query: 223 SSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           S F EE+ +QFGS  PM+R GQP E+AP YVFLA    SSYITGQ+LH N
Sbjct: 235 SDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASP-DSSYITGQMLHVN 283

Length = 290

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score =  225 bits (574), Expect = 6e-73
 Identities = 113/277 (40%), Positives = 162/277 (58%), Gaps = 22/277 (7%)

Query: 7   QFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG 66
            FP Q QEA PG  H M+P P      YK   +L+G+ AL+TG DSGIGRA A  +A EG
Sbjct: 21  PFPEQTQEA-PGTIHEMQPKPDHGEQSYKGFGRLQGRKALITGADSGIGRATAIAFAREG 79

Query: 67  ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGK 126
           A +A  Y+   EE+DA E +++++       +  +A+  DL  +  C+++V+  V   G 
Sbjct: 80  ADIALNYLPE-EEQDAAEVVQLIQAE----GRKAVALPGDLKDEAFCRQLVERAVKELGG 134

Query: 127 IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE 186
           +DILVN A  Q     + +I  E+ +  F+TN+++ F++ + ++ H+  G++IINT S++
Sbjct: 135 LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194

Query: 187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES-A 231
               SP                + LA Q+ E+GIRVN VAPGP+WTPL PS     E   
Sbjct: 195 SYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIP 254

Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
            FGSE PMKR GQP+E+AP YV LA    SSY+TG+V
Sbjct: 255 DFGSETPMKRPGQPVEMAPLYVLLASQE-SSYVTGEV 290

Length = 300

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  208 bits (532), Expect = 3e-67
 Identities = 96/249 (38%), Positives = 128/249 (51%), Gaps = 22/249 (8%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L GKVALVTG  SGIGRA+A   A EGA V        EE+ A+     ++EA    A 
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAAR-RSEEEAAEALAAAIKEAGGGRAA 60

Query: 99  DPMAISADLGFDEN-CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              A++AD+  DE   + +V      +G+IDILVNNA +      +EE+ EE  +RV   
Sbjct: 61  ---AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDV 117

Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
           N+   F +TR +L  M +   I+N +SV  L   P                + LAL+L  
Sbjct: 118 NLLGAFLLTRAALPLMKKQR-IVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAP 176

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
           RGIRVN VAPG I TP+  +  S   E   +  + +P+ R G P EVA    FLA +  +
Sbjct: 177 RGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAA 236

Query: 262 SYITGQVLH 270
           SYITGQ L 
Sbjct: 237 SYITGQTLP 245

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  199 bits (507), Expect = 1e-63
 Identities = 90/242 (37%), Positives = 127/242 (52%), Gaps = 26/242 (10%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           ALVTG  SGIGRA+A   A EGA V         E+   E   I          + +A+ 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRN---EEALAELAAIEALGG-----NAVAVQ 52

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
           AD+  +E+ + +V+E +  +G++DILVNNA +    G +EE+ +E  +RV   N+   F 
Sbjct: 53  ADVSDEEDVEALVEEALEEFGRLDILVNNAGIARP-GPLEELTDEDWDRVLDVNLTGVFL 111

Query: 165 MTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRV 208
           +TR +L HM +  G  I+N +SV  L   P                R LAL+L   GIRV
Sbjct: 112 LTRAALPHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRV 171

Query: 209 NGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
           N VAPG + TP++     EE   +  + +P+ R G P EVA   VFLA +  +SYITGQV
Sbjct: 172 NAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDE-ASYITGQV 230

Query: 269 LH 270
           + 
Sbjct: 231 IP 232

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score =  196 bits (500), Expect = 6e-62
 Identities = 108/277 (38%), Positives = 161/277 (58%), Gaps = 22/277 (7%)

Query: 7   QFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG 66
           ++P QKQ   PG +  M P P      Y  S +L+ + ALVTGGDSGIGRA A  YA EG
Sbjct: 15  EYPKQKQPT-PGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREG 73

Query: 67  ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGK 126
           A VA +Y+   EE+DAQ+  +I+ E      +  + +  DL  ++  + +V E   A G 
Sbjct: 74  ADVAISYLPV-EEEDAQDVKKIIEEC----GRKAVLLPGDLSDEKFARSLVHEAHKALGG 128

Query: 127 IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE 186
           +DI+   A  Q     + ++  E+ ++ F  N+F+ F++T+ ++  + +G++II T+S++
Sbjct: 129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188

Query: 187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPL-IPSSFSEEESA 231
               SP               +RGLA Q+ E+GIRVN VAPGPIWT L I    ++++  
Sbjct: 189 AYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP 248

Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
           QFG + PMKRAGQP E+AP YV+LA    SSY+T +V
Sbjct: 249 QFGQQTPMKRAGQPAELAPVYVYLASQE-SSYVTAEV 284

Length = 294

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  187 bits (478), Expect = 5e-59
 Identities = 88/250 (35%), Positives = 124/250 (49%), Gaps = 25/250 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L GKVALVTG   GIGRA+A   A +GA V   Y  S  E  A+  +  +         
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASS--EAGAEALVAEIGAL----GG 55

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             +A+  D+   E+ +R VDE    +G +DILVNNA +  +   +  + EE  +RV  TN
Sbjct: 56  KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTN 114

Query: 159 IFSHFFMTRHSLRHMNEGS--AIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +   F +T+   R M +     IIN +SV  L  +P                + LA +L 
Sbjct: 115 LTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELA 174

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            RGI VN VAPG I T +   +  E+      +++P+ R GQP E+A    FLA +  ++
Sbjct: 175 SRGITVNAVAPGFIETDMTD-ALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDE-AA 232

Query: 263 YITGQVLHPN 272
           YITGQ LH N
Sbjct: 233 YITGQTLHVN 242

Length = 248

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  178 bits (455), Expect = 1e-55
 Identities = 96/247 (38%), Positives = 141/247 (57%), Gaps = 25/247 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL GKVA+VTG   GIGRA+A   A EGA V   Y  ++E   AQE LE ++E       
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEA--AQELLEEIKEE----GG 55

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           D +A+ AD+  +E+ + +V+++V  +GKIDILVNNA +    G V ++ +E  +RV   N
Sbjct: 56  DAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVN 114

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSP-EA-------------RGLALQLV 202
           +     +TR++L +M   +   I+N +S+  L  +  E              + LA +L 
Sbjct: 115 LTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELA 174

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             GIRVN VAPG I T  + SSFSEE+      E+P+ R G+P E+A   +FLA +  +S
Sbjct: 175 PSGIRVNAVAPGAIDTE-MWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDD-AS 232

Query: 263 YITGQVL 269
           YITGQ++
Sbjct: 233 YITGQII 239

Length = 247

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  163 bits (414), Expect = 1e-49
 Identities = 83/247 (33%), Positives = 120/247 (48%), Gaps = 22/247 (8%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG   GIGRA+A   A +GA+V   Y  S+    A+E +  +  A       
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAA--AEEVVAEIEAAGGKAI-- 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A+ AD+       R+ D    A+G +DILVNNA V      + E  EE  +R+F  N 
Sbjct: 57  --AVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGV-MLKKPIAETSEEEFDRMFTVNT 113

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERG 205
              FF+ + + + + +G  IIN +S     ++P                R LA +L  RG
Sbjct: 114 KGAFFVLQEAAKRLRDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRG 173

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           I VN VAPGP+ T +  +  +EE    +    P+ R G+P ++AP   FLA      ++ 
Sbjct: 174 ITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPD-GRWVN 232

Query: 266 GQVLHPN 272
           GQV+  N
Sbjct: 233 GQVIRAN 239

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  162 bits (412), Expect = 4e-49
 Identities = 81/248 (32%), Positives = 117/248 (47%), Gaps = 26/248 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+VALVTG   GIGRA+A   A +GA V    V      DA  T E++  A       
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAEVI---VVDICGDDAAATAELVEAAGGKAR-- 58

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A   D+      K  V   V  +G++DILV NA + +      E+D+E+ ERV   N+
Sbjct: 59  --ARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGI-FPLTPFAEMDDEQWERVIDVNL 115

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVE------PLWHSPEA---------RGLALQLV 202
              F +T+ +L  +    G  I+ T+SV       P      A         R LAL+L 
Sbjct: 116 TGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELA 175

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            R I VN V PG + TP+  +    + +    + +P+ R G+P ++A   +FLA +  + 
Sbjct: 176 ARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDE-AR 234

Query: 263 YITGQVLH 270
           YITGQ L 
Sbjct: 235 YITGQTLP 242

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  161 bits (411), Expect = 4e-49
 Identities = 90/247 (36%), Positives = 127/247 (51%), Gaps = 28/247 (11%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTG   GIGRA+A   A EGA VA T      E+ A ET+E ++        +  A
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRS---EEAAAETVEEIKALG----GNAAA 53

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + AD+   E  + +V++V   +G +DILVNNA +  +   +  + EE  + V   N+   
Sbjct: 54  LEADVSDREAVEALVEKVEAEFGPVDILVNNAGIT-RDNLLMRMSEEDWDAVINVNLTGV 112

Query: 163 FFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------------ARGLALQLVERG 205
           F +T+  +R M +   G  IIN +SV  L  +P                + LA +L  RG
Sbjct: 113 FNVTQAVIRAMIKRRSGR-IINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRG 171

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           I VN VAPG I T +   +  E+   +   ++P+ R G P EVA    FLA +  +SYIT
Sbjct: 172 ITVNAVAPGFIDTDMT-DALPEKVKEKILKQIPLGRLGTPEEVANAVAFLASDD-ASYIT 229

Query: 266 GQVLHPN 272
           GQVLH N
Sbjct: 230 GQVLHVN 236

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  161 bits (411), Expect = 5e-49
 Identities = 89/244 (36%), Positives = 121/244 (49%), Gaps = 25/244 (10%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           ALVTG   GIGRA+A   A EGA V  TY  S+E   A+E +E L+            + 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEG--AEEVVEELKAYGVKAL----GVV 54

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
            D+   E+ K VV+E+    G IDILVNNA +  +   +  + EE  + V  TN+   F 
Sbjct: 55  CDVSDREDVKAVVEEIEEELGPIDILVNNAGIT-RDNLLMRMKEEDWDAVIDTNLTGVFN 113

Query: 165 MTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRV 208
           +T+  LR M       IIN +SV  L  +                 + LA +L  R I V
Sbjct: 114 LTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITV 173

Query: 209 NGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
           N VAPG I T +     SE+   +  S++P+ R G P EVA    FLA +  +SYITGQV
Sbjct: 174 NAVAPGFIDTDMT-DKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDE-ASYITGQV 231

Query: 269 LHPN 272
           +H +
Sbjct: 232 IHVD 235

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  161 bits (409), Expect = 9e-49
 Identities = 85/248 (34%), Positives = 120/248 (48%), Gaps = 26/248 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L+GK ALVTG   GIGRA+A   A +GA V         E+ A+     LR A      
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSN---EEAAEALAAELRAAGGEAR- 57

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               +  D+  +   + +++  V A+G +DILVNNA +  +   +  + EE  +RV   N
Sbjct: 58  ---VLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGI-TRDALLPRMSEEDWDRVIDVN 113

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
           +   F + R +L  M       I+N +SV  +  +P                + LAL+L 
Sbjct: 114 LTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELA 173

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            RGI VN VAPG I T +      EE  A+   E+P+ R GQP EVA    FLA +  +S
Sbjct: 174 SRGITVNAVAPGFIDTDMT-EGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDA-AS 231

Query: 263 YITGQVLH 270
           YITGQV+ 
Sbjct: 232 YITGQVIP 239

Length = 246

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  161 bits (409), Expect = 1e-48
 Identities = 82/247 (33%), Positives = 122/247 (49%), Gaps = 25/247 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+VALVTG   G+GRA+A   A  GA V   Y   +E   A+E +E +          
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEA--AEELVEAVEALGRRAQ-- 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A+ AD+      +  V   V  +G+IDILVNNA + ++   + ++ ++  + V   N+
Sbjct: 60  --AVQADVTDKAALEAAVAAAVERFGRIDILVNNAGI-FEDKPLADMSDDEWDEVIDVNL 116

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVE--PLW--HSPEA----------RGLALQLVE 203
              F + R  +  M +  G  I+N +SV   P W   S  A          + LA +L E
Sbjct: 117 SGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAE 176

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
            GI VN VAPG I T +  ++  E   A+  +E P+ R+G P ++A    FL C+  S Y
Sbjct: 177 YGITVNMVAPGDIDTDMKEATIEEAREAK-DAETPLGRSGTPEDIARAVAFL-CSDASDY 234

Query: 264 ITGQVLH 270
           ITGQV+ 
Sbjct: 235 ITGQVIE 241

Length = 249

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  155 bits (395), Expect = 1e-46
 Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 28/249 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG  SGIG  +A  +A EGA V  T      E+ A+     +     +    
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRN---EEAAERVAAEILAGGRA---- 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A++AD+  + + +  V   +  +G +DILVNNA   ++ G + ++DE   +R+F  N+
Sbjct: 56  -IAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNV 114

Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            S +  T+ ++  M    G AI+N  S   L   P                + LA +L  
Sbjct: 115 KSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGP 174

Query: 204 RGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
             IRVN VAP  + T L+ +     + E  A+F + +P+ R G P ++A   +FLA +  
Sbjct: 175 DKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDE- 233

Query: 261 SSYITGQVL 269
           +S+ITG  L
Sbjct: 234 ASWITGVTL 242

Length = 251

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  155 bits (393), Expect = 3e-46
 Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 26/248 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVALVTG  SGIG+A+A   A  GA V   Y   ++  +     E++ E K    K 
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAE-----EVVEEIKAVGGK- 54

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+ AD+  +E+   +    +  +G +DILVNNA +Q  A S  E+  E   +V   N+
Sbjct: 55  AIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSH-EMTLEDWNKVIDVNL 113

Query: 160 FSHFFMTRHSLRHMNEGSA---IINTTSVEPL--W----HSPEARG--------LALQLV 202
              F   R +++   +      IIN +SV     W    +   ++G        LA +  
Sbjct: 114 TGQFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYA 173

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            +GIRVN +APG I TP+   ++ + E  A   S +PM R G+P E+A    +LA +  +
Sbjct: 174 PKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDE-A 232

Query: 262 SYITGQVL 269
           SY+TG  L
Sbjct: 233 SYVTGTTL 240

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  148 bits (376), Expect = 1e-43
 Identities = 80/251 (31%), Positives = 114/251 (45%), Gaps = 25/251 (9%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           + L GK ALVTG   G+G A A   A  GATVAF    + E   A+E    L  A     
Sbjct: 3   SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAE---ARELAAALEAA----G 55

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
               AI+ADL    + +R  D    A G +D LVNNA +     + E +D +  + V   
Sbjct: 56  GRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATE-LDIDTWDAVMNV 114

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQL 201
           N+   F M R +L H+ +     I+N  S   LW +P+               R LA +L
Sbjct: 115 NVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLAREL 174

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             RGI VN +APG   T       ++E  A +     ++R   P +VA   +FL  +  +
Sbjct: 175 GGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDA-A 233

Query: 262 SYITGQVLHPN 272
            ++TGQ+L  N
Sbjct: 234 RFVTGQLLPVN 244

Length = 250

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  145 bits (369), Expect = 1e-42
 Identities = 78/256 (30%), Positives = 114/256 (44%), Gaps = 39/256 (15%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKVALVT   SGIG A+A   A EGA VA     ++  ++ +     LR          +
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAIC---ARNRENLERAASELRAGGAG----VL 53

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           A+ ADL   E+  R+V++  +A+G++DILVNNA      G   E+ +E     F   + S
Sbjct: 54  AVVADLTDPEDIDRLVEKAGDAFGRVDILVNNAG-GPPPGPFAELTDEDWLEAFDLKLLS 112

Query: 162 HFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE----------------ARGLALQLVE 203
              + R  L  M       I+N +S+      PE                 + L+ +L  
Sbjct: 113 VIRIVRAVLPGMKERGWGRIVNISSL--TVKEPEPNLVLSNVARAGLIGLVKTLSRELAP 170

Query: 204 RGIRVNGVAPGPIWTPLIPSSFS----------EEESAQFGSEVPMKRAGQPIEVAPCYV 253
            G+ VN V PG I T  +               EE   +  S++P+ R G+P E+A    
Sbjct: 171 DGVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIA 230

Query: 254 FLACNHCSSYITGQVL 269
           FLA    +SYITGQ +
Sbjct: 231 FLASEK-ASYITGQAI 245

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  142 bits (360), Expect = 2e-41
 Identities = 88/247 (35%), Positives = 120/247 (48%), Gaps = 22/247 (8%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  KVA+VTG   GIG A+A   A +G  VA  Y  S     A E +  +  A       
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAA--ADELVAEIEAA----GGR 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+ AD+       R+ D    A+G+ID+LVNNA V    G++ + D E  +R   TN+
Sbjct: 57  AIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGV-MPLGTIADFDLEDFDRTIATNL 115

Query: 160 FSHFFMTRHSLRHMNEGSAIIN-TTSVEPLWH---SPEA----------RGLALQLVERG 205
              F + R + RH+ +G  IIN +TSV  L      P A            LA +L  RG
Sbjct: 116 RGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRG 175

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           I VN VAPGP+ T L  +  S E+  Q     P++R G P E+A    FLA     +++ 
Sbjct: 176 ITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPD-GAWVN 234

Query: 266 GQVLHPN 272
           GQVL  N
Sbjct: 235 GQVLRVN 241

Length = 245

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  141 bits (356), Expect = 8e-41
 Identities = 82/252 (32%), Positives = 112/252 (44%), Gaps = 31/252 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L G+VA+VTG  SGIGRA A  +A EGA V    V  ++ + A+     +         
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVV---VADRDAEAAERVAAAIAA-----GG 53

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A   D+G  E  + +VD V   +G++D+LVNNA      G+V   DE   + V R N
Sbjct: 54  RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFG-CGGTVVTTDEADWDAVMRVN 112

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +   F   ++++  M    G +I+NT S   L                    R +AL   
Sbjct: 113 VGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHA 172

Query: 203 ERGIRVNGVAPGPIWTPLIPSSF-----SEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
             GIRVN VAPG I TP     F      E       +  PM R G   EVA   +FLA 
Sbjct: 173 TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLAS 232

Query: 258 NHCSSYITGQVL 269
           +  SS+ TG  L
Sbjct: 233 DE-SSFATGTTL 243

Length = 252

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  140 bits (355), Expect = 1e-40
 Identities = 82/246 (33%), Positives = 124/246 (50%), Gaps = 24/246 (9%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L G+ AL+TG   GIG A+A  +   GA V      +++     +  + L E      +
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIV---ARDADALAQARDELAEEFP--ER 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           +   ++AD+  DE+ + ++D V + +  + ILVNNA    +  +++  ++E    +F TN
Sbjct: 61  EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDE-WRGIFETN 119

Query: 159 IFSHFFMTR--HSLRHMNEGSAIINTTSVEPLWH----SPEA----------RGLALQLV 202
           +FS F ++R  H L   +  SAI+N  SV  L H    +P            R LA++  
Sbjct: 120 LFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA 179

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
           E GIRVN VAP  I TPL     S+ +   Q     PM+R G+P EVA    FL C   +
Sbjct: 180 EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFL-CMPAA 238

Query: 262 SYITGQ 267
           SYITGQ
Sbjct: 239 SYITGQ 244

Length = 257

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  140 bits (354), Expect = 2e-40
 Identities = 82/250 (32%), Positives = 126/250 (50%), Gaps = 26/250 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA++TG  SGIG   A  +A  GA +A T    ++ +  +ET +   +A  S  K 
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALT---GRDAERLEETRQSCLQAGVS-EKK 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + + ADL  +E   R++   +  +G++DILVNNA +  K G  E+ D E  ++V   N+
Sbjct: 57  ILLVVADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAK-GGGEDQDIEEYDKVMNLNL 115

Query: 160 FSHFFMTRHSLRHMNEGS-AIINTTSVEPLWHSPEA--------------RGLALQLVER 204
            +  ++T+ ++ H+ +    I+N +SV      P                R  AL+L  +
Sbjct: 116 RAVIYLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPK 175

Query: 205 GIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSE----VPMKRAGQPIEVAPCYVFLACNH 259
           G+RVN V+PG I T         EE+  +F S      P+ R G   EVA    FLA + 
Sbjct: 176 GVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLA-SD 234

Query: 260 CSSYITGQVL 269
            SS+ITGQ+L
Sbjct: 235 ASSFITGQLL 244

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  138 bits (350), Expect = 6e-40
 Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 31/248 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           ++L+GK AL+TGG SGIG   A  +  EGA VA T            +LE    A+    
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRD-------PASLE---AARAELG 51

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
           +  + I AD G     K +   +  A+G++D +  NA V  K   +E+ DE   +R F T
Sbjct: 52  ESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNT 110

Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
           N+   +F+ +  L  +   ++I+   S+      P               A+ L+ +L+ 
Sbjct: 111 NVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLP 170

Query: 204 RGIRVNGVAPGPIWTPL-----IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           RGIRVN V+PGP+ TPL     +P +  +  +AQ  + VP+ R G P E+A   ++LA +
Sbjct: 171 RGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASD 230

Query: 259 HCSSYITG 266
             S++I G
Sbjct: 231 E-SAFIVG 237

Length = 249

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  138 bits (350), Expect = 7e-40
 Identities = 82/258 (31%), Positives = 122/258 (47%), Gaps = 39/258 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+GKVAL+TG  SGIG AVA  Y  EGA V    +K      A+     +  A      
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPA---RARLAALEIGPAA----- 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             +A+S D+   ++  R+V   V  +G IDIL NNAA+ +    + +I  +  +R+F  N
Sbjct: 55  --IAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAAL-FDMAPILDISRDSYDRLFAVN 111

Query: 159 IFSHFFMTRHSLRHMNE---GSAIINTTSV-----EPL---WHSPEA------RGLALQL 201
           +   FF+ +   RHM E   G  IIN  S      E L   + + +A      +  AL L
Sbjct: 112 VKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALAL 171

Query: 202 VERGIRVNGVAPGPIWTPL---IPSSFSE-------EESAQFGSEVPMKRAGQPIEVAPC 251
           +  GI VN +APG + TP+   + + F+        E+    G  VP+ R G P ++   
Sbjct: 172 IRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGM 231

Query: 252 YVFLACNHCSSYITGQVL 269
            +FLA    + YI  Q  
Sbjct: 232 ALFLASAD-ADYIVAQTY 248

Length = 257

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  136 bits (346), Expect = 3e-39
 Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 33/252 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVA +TGG +GIG+A+A  +A  GA+VA   +  ++ +  +   E +  A    A  
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVA---IAGRKPEVLEAAAEEISSATGGRA-- 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              I  D+   E  +  VDE +  +GKIDIL+NNAA  + A + E +     + V   ++
Sbjct: 56  -HPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPA-ESLSPNGFKTVIDIDL 113

Query: 160 FSHFFMTRHSLRHMNE---GSAIIN---TTSVEPLW---HSPEA--------RGLALQLV 202
              F  T+   + + E   G +I+N   T +        HS  A        R LA++  
Sbjct: 114 NGTFNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWG 173

Query: 203 ERGIRVNGVAPGPI-----WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
             GIRVN +APGPI        L PS  SE++  +    VP+ R G P E+A   +FL  
Sbjct: 174 PYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIE---RVPLGRLGTPEEIANLALFLLS 230

Query: 258 NHCSSYITGQVL 269
           +   SYI G  L
Sbjct: 231 DAA-SYINGTTL 241

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  135 bits (342), Expect = 8e-39
 Identities = 75/248 (30%), Positives = 113/248 (45%), Gaps = 28/248 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL-REAKTSDAK 98
           L+GKVALVTG   GIG  +A   A  GA +       ++ ++AQ+ +E    EA      
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEA------ 56

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A + D+  +E  K  V+ +   +GKIDILVNNA +  +    EE  E     V   N
Sbjct: 57  --TAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRH-PAEEFPEAEWRDVIDVN 113

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEP----LWHSPEA----------RGLALQLV 202
           +   FF+++   RHM +     IIN  S+            A          + LA +  
Sbjct: 114 LNGVFFVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWA 173

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQF-GSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             GI+VN +APG   T +  +  ++ E        +P  R GQP ++    VFLA +  S
Sbjct: 174 RHGIQVNAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAVFLA-SDAS 232

Query: 262 SYITGQVL 269
            Y+ GQ++
Sbjct: 233 DYVNGQII 240

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  133 bits (337), Expect = 7e-38
 Identities = 76/249 (30%), Positives = 131/249 (52%), Gaps = 28/249 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKV ++TGG +G+GRA+A  +  E A V   Y   +EE  A +  E +++A      +
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEE--ANDVAEEIKKA----GGE 58

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+  D+  + +   ++   V  +G +D+++NNA ++    S  E+  E   +V  TN+
Sbjct: 59  AIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPS-HEMSLEDWNKVINTNL 117

Query: 160 FSHFFMTRHSLRHMNE----GSAIINTTSVE-----PLW-HSPEARG--------LALQL 201
              F  +R ++++  E    G+ IIN +SV      PL+ H   ++G        LA++ 
Sbjct: 118 TGAFLGSREAIKYFVEHDIKGN-IINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEY 176

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
             +GIRVN + PG I TP+    F++ ++ A   S +PM   G+P E+A    +LA +  
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE- 235

Query: 261 SSYITGQVL 269
           +SY+TG  L
Sbjct: 236 ASYVTGITL 244

Length = 261

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  132 bits (333), Expect = 2e-37
 Identities = 83/250 (33%), Positives = 133/250 (53%), Gaps = 26/250 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GKVA+VTGG  GIG+A+    A EGA V   Y  S+E  +      ++ E    +  
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAEN-----LVNELGK-EGH 56

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           D  A+ AD+   E+  R+V+E VN +GK+DILVNNA +  +  + ++++ E  ERV   N
Sbjct: 57  DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGIT-RDRTFKKLNREDWERVIDVN 115

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSV--------EPLWHSPEA------RGLALQLV 202
           + S F  T   L ++   E   II+ +S+        +  + + +A      + LAL+L 
Sbjct: 116 LSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA 175

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           +  + VN + PG I T ++ +   EE   +  +++P KR GQ  E+A   V+L  +   +
Sbjct: 176 KTNVTVNAICPGFIDTEMV-AEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD--GA 232

Query: 263 YITGQVLHPN 272
           YITGQ L+ N
Sbjct: 233 YITGQQLNIN 242

Length = 247

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  132 bits (333), Expect = 2e-37
 Identities = 76/251 (30%), Positives = 129/251 (51%), Gaps = 26/251 (10%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S    GKVALVTGG +GIGRA A  +A EGA V    V  ++    +ET+ ++REA    
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAKVV---VADRDAAGGEETVALIREA---- 54

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
             + + ++ D+  D   K +V++ + AYG++D   NNA ++ + G + E  E   + +  
Sbjct: 55  GGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMG 114

Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQ 200
            N+   +   ++ +  M    G AI+NT SV  L  +P+               +  A++
Sbjct: 115 VNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIE 174

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEV-PMKRAGQPIEVAPCYVFLACN 258
             ++GIRVN V P  I T +   ++ ++   A+F + + P+ R G+  EVA   ++L C+
Sbjct: 175 YAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYL-CS 233

Query: 259 HCSSYITGQVL 269
             +S+ TG  L
Sbjct: 234 DGASFTTGHAL 244

Length = 253

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  131 bits (332), Expect = 2e-37
 Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 32/252 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +L GKVA+VTG  SG G  +A  +A EGA V    + +     A+     + EA     
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINA---DGAERVAADIGEAA---- 53

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              +AI AD+    + + +V+  ++ +G++DILVNNA + ++   + E+DEE  +RVF  
Sbjct: 54  ---IAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAV 110

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL--------------WHSPEARGLALQL 201
           N+ S +   +  + HM E  G  IIN  S   L              W     + +A++L
Sbjct: 111 NVKSIYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVEL 170

Query: 202 VERGIRVNGVAPGPIWTPLIPSSF----SEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
             R IRVN + P    TPL+ S F    + E  A+F + +P+ R   P ++A   ++LA 
Sbjct: 171 APRNIRVNCLCPVAGETPLL-SMFMGEDTPENRAKFRATIPLGRLSTPDDIANAALYLAS 229

Query: 258 NHCSSYITGQVL 269
           +  +S+ITG  L
Sbjct: 230 DE-ASFITGVAL 240

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  132 bits (333), Expect = 3e-37
 Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 37/257 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G   LVTGG SGIGRA+A  +A  GA V   +V    E     T   L  AK +    
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARV---HVCDVSEAALAATAARLPGAKVT---- 61

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A  AD+      +RV D  V  +G +D+LVNNA +    G ++EI  E+ E+    N+
Sbjct: 62  --ATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNL 119

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEPL----WHSPEA----------RGLALQLV 202
              F+  R ++  +     G  II  +SV         +P A          + LA++L 
Sbjct: 120 NGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG 179

Query: 203 ERGIRVNGVAPGPIWTP----LIPSSFS------EEESAQFGSEVPMKRAGQPIEVAPCY 252
             GIRVN + PG +  P    +I +         +E   ++  ++ + R  +P ++A   
Sbjct: 180 PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATA 239

Query: 253 VFLACNHCSSYITGQVL 269
           +FL  +  + YITGQ +
Sbjct: 240 LFL-ASPAARYITGQAI 255

Length = 264

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  131 bits (331), Expect = 4e-37
 Identities = 85/251 (33%), Positives = 121/251 (48%), Gaps = 30/251 (11%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           N+L+GKVA+VTGG  G+G A A     EGA V  + +  +E + A    E+   A     
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAA--ELGDAA----- 53

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                   D+  ++    VVD    A+G++D+LVNNA +    G+VE    E   R+   
Sbjct: 54  ---RFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGIL-TGGTVETTTLEEWRRLLDI 109

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVE-----PLWHSPEA-----RGL----ALQL 201
           N+   F  TR  +  M E  G +IIN +S+E     P   +  A     RGL    AL+ 
Sbjct: 110 NLTGVFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALEC 169

Query: 202 VER--GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
             +  GIRVN V PG I+TP+       +         PM RAG+P E+A   V+LA + 
Sbjct: 170 ATQGYGIRVNSVHPGYIYTPMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDE 229

Query: 260 CSSYITGQVLH 270
            SS++TG  L 
Sbjct: 230 -SSFVTGSELV 239

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  131 bits (330), Expect = 6e-37
 Identities = 79/251 (31%), Positives = 113/251 (45%), Gaps = 33/251 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK ALVTGG  GIG A+    A  GA V      ++ +K+  E L   RE        
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTC---ARNQKELDECLTEWREK----GFK 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNA-AVQYKAGSVEEID--EERLERVF 155
                 D+      + ++D V + + GK++ILVNNA     K    E  D  EE    + 
Sbjct: 57  VEGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRK----EAKDYTEEDYSLIM 112

Query: 156 RTNIFSHFFMTR--HSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLAL 199
            TN  + + ++R  H L   +    I+  +SV  +   P                R LA 
Sbjct: 113 STNFEAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLAC 172

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           +  +  IRVN VAP  I TPL+     ++E+  +     P+KR G+P EVA    FL C 
Sbjct: 173 EWAKDNIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFL-CM 231

Query: 259 HCSSYITGQVL 269
             +SYITGQ++
Sbjct: 232 PAASYITGQII 242

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  130 bits (330), Expect = 9e-37
 Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 39/256 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L GK ALVTGG  G+G  +A      GA V  +  K++E ++A   LE       +   
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLE-------ALGI 61

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           D + I+AD+  + + +R+ +E +  +G +DILVNNA   + A   E+   E  ++V   N
Sbjct: 62  DALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGA-PAEDHPVEAWDKVMNLN 120

Query: 159 IFSHFFMTRHSLRHM---NEGSAIINTTSVEPLW-HSPE-----------------ARGL 197
           +   F +++   +          IIN  SV  L  + PE                  R L
Sbjct: 121 VRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRAL 180

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV----PMKRAGQPIEVAPCYV 253
           A +    GIRVN +APG       P+  +     + G ++    P+ R G   ++    +
Sbjct: 181 AAEWGPHGIRVNAIAPG-----FFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAAL 235

Query: 254 FLACNHCSSYITGQVL 269
            LA +  S +ITGQ+L
Sbjct: 236 LLASD-ASKHITGQIL 250

Length = 259

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  128 bits (324), Expect = 5e-36
 Identities = 86/254 (33%), Positives = 132/254 (51%), Gaps = 35/254 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S + +GKVAL+TGG  GIGRA+A  +  EGA VA  Y  +  E +A+E    LRE     
Sbjct: 2   SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA--ENEAKE----LRE----- 50

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            K    I  D+G  +  K+  + V   +G++D+LVNNA + Y     EE DEE+  ++ +
Sbjct: 51  -KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLM-PFEEFDEEKYNKMIK 108

Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE---------------ARGLAL 199
            N+    + T   L  +  ++  AI+N  S   +  + E                R LA 
Sbjct: 109 INLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAF 168

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ----FGSEVPMKRAGQPIEVAPCYVFL 255
           +L + GIRVN VAPG + T +  S  S+EE+ +    F ++  +K  G+P ++A   +FL
Sbjct: 169 ELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFL 228

Query: 256 ACNHCSSYITGQVL 269
           A +  + YITGQV+
Sbjct: 229 ASDD-ARYITGQVI 241

Length = 255

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  128 bits (323), Expect = 6e-36
 Identities = 79/251 (31%), Positives = 118/251 (47%), Gaps = 31/251 (12%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA-QETLEILREAKTSDAKDPM 101
           KV L+TGG SG+G A A   A EGA ++   +  +  + A    LEI  +A+       +
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEV------L 57

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            I AD+  +   +  VD  V  +G+ID   NNA ++ K    E+   +  ++V   N+  
Sbjct: 58  LIKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRG 117

Query: 162 HFFMTRHSLRHMNE-GS-AIINTTSVEPLW----HSPEA----------RGLALQLVERG 205
            F+     L+ M E GS  I+NT SV  +      S  A          R  A++  + G
Sbjct: 118 VFYGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYG 177

Query: 206 IRVNGVAPGPIWTPLIPSSFS-------EEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           IR+N +APG I TP++  S         EE   +F S  PMKR G+P EVA    FL  +
Sbjct: 178 IRINAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSD 237

Query: 259 HCSSYITGQVL 269
             + Y+   V+
Sbjct: 238 D-AGYVNAAVV 247

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  125 bits (317), Expect = 6e-35
 Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 30/244 (12%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           +VA+VT  DSGIG+A A   A +G  +  T+    +E+ A+ET E +R            
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITW--HSDEEGAKETAEEVRSH----GVRAEI 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              DL       + +D+++   G+ID+LVNNA    KA  + ++D +   ++F  ++   
Sbjct: 57  RQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFL-DMDFDEWRKIFTVDVDGA 115

Query: 163 FFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA--------------RGLALQLVERG 205
           F  ++ + RHM    +G  IIN TSV      P A              + +AL+LVE G
Sbjct: 116 FLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHG 175

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGS--EVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           I VN VAPG I TP+   +  ++   +  S   +P+ R G   E+A    +L C+  +SY
Sbjct: 176 ILVNAVAPGAIATPM---NGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWL-CSEGASY 231

Query: 264 ITGQ 267
            TGQ
Sbjct: 232 TTGQ 235

Length = 256

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 7e-35
 Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 27/247 (10%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KV ++TG   GIG A A   A  G  V   Y+++++  +A      + +A      + +A
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEA------VVQAIRRQGGEALA 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           ++AD+  + +  R+ + V    G++D LVNNA +      +E++D  RL R+F TN+   
Sbjct: 57  VAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGS 116

Query: 163 FFMTRH-----SLRHMNEGSAIINTTSVEPLWHSPEAR---------------GLALQLV 202
           F   R      S RH   G AI+N +S+     SP                  GLA ++ 
Sbjct: 117 FLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVA 176

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             GIRVN V PG I+T +  S        +  + +PM R G   EVA   ++L  +  +S
Sbjct: 177 AEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDE-AS 235

Query: 263 YITGQVL 269
           Y TG  +
Sbjct: 236 YTTGTFI 242

Length = 248

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  124 bits (313), Expect = 1e-34
 Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 27/244 (11%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           ALVTGG  GIG+A+A   A  GA V   Y KS++   A E    + E         + + 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDA--AAEVAAEIEE----LGGKAVVVR 54

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
           AD+   ++ + +   V   +G++D+LV+NAA       + E+     +    TN+ +   
Sbjct: 55  ADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFR-PLSELTPAHWDAKMNTNLKALVH 113

Query: 165 MTRHSLRHMNE--GSAIINTTSVEPLWHSP------------EA--RGLALQLVERGIRV 208
             + + + M E  G  I+  +S+  +   P            EA  R LA++L  RGIRV
Sbjct: 114 CAQQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRV 173

Query: 209 NGVAPGPIWTPLIPSSFSEEESAQFGS--EVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
           N V+PG I T  + + F   E     +    P  R G P +VA   V   C+  +  ITG
Sbjct: 174 NAVSPGVIDTDAL-AHFPNREDLLEAAAANTPAGRVGTPQDVADA-VGFLCSDAARMITG 231

Query: 267 QVLH 270
           Q L 
Sbjct: 232 QTLV 235

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score =  123 bits (311), Expect = 3e-34
 Identities = 79/247 (31%), Positives = 116/247 (46%), Gaps = 27/247 (10%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            +ALVTGG  GIGRA A   A EG TVA  Y   Q    AQE + ++    T        
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNY--QQNLHAAQEVVNLI----TQAGGKAFV 55

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + AD+  +     +   +      +  LVNNA + +   +VE +  ER+ RV  TN+  +
Sbjct: 56  LQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGY 115

Query: 163 FF-----MTRHSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLV 202
           F      + R +L+H   G AI+N +S      +P                  GL+L++ 
Sbjct: 116 FLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVA 175

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            +GIRVN V PG I+T +  S        +  S +PM+R GQP EVA   V+L  +  +S
Sbjct: 176 AQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDK-AS 234

Query: 263 YITGQVL 269
           Y+TG  +
Sbjct: 235 YVTGSFI 241

Length = 247

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  124 bits (312), Expect = 4e-34
 Identities = 79/251 (31%), Positives = 123/251 (49%), Gaps = 31/251 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L  KVA++TG  +GIG+A A   A EGA V    +     +   +      +AK     
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAK----- 57

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A   D+  ++  K    E+   +G++D+L NNA V   AG + E   +  +++   +
Sbjct: 58  ---AYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVD 114

Query: 159 IFSHFFMTRHSLRHM-NEGSAIINTTSV----EPLWHS--PEARG--------LALQLVE 203
           +   F MT+  L  M  +G +IINT+S       L+ S    A+G        +A++   
Sbjct: 115 MRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGR 174

Query: 204 RGIRVNGVAPGPIWTPLIP--SSFSEEESAQFGSE-----VPMKRAGQPIEVAPCYVFLA 256
            GIR N +APG I TPL+   +  SE+E+ +   E      P+ R G+P EVA   VFLA
Sbjct: 175 DGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLA 234

Query: 257 CNHCSSYITGQ 267
            +  SS+ITG+
Sbjct: 235 SDD-SSFITGE 244

Length = 272

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 5e-34
 Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 36/256 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L+GKVALVTG  SGIG  +A   A EGA V    +  +    A E L            
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL-------QKAGG 53

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + ++ D+  +E     +D  V  +G +DILVNNA +Q+ A  +E+   E+ +++    
Sbjct: 54  KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVA-PIEDFPTEKWKKMIAIM 112

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +   F  T+ +L  M    G  IIN  SV  L  S                 + +AL+  
Sbjct: 113 LDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGA 172

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQ---FGSEVPMKRAGQPIEVAPC 251
             G+ VN + PG + TPL+     +        EE          VP KR     E+A  
Sbjct: 173 THGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADY 232

Query: 252 YVFLACNHCSSYITGQ 267
            +FL  +  +  +TGQ
Sbjct: 233 ALFL-ASFAAKGVTGQ 247

Length = 258

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  122 bits (309), Expect = 9e-34
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 36/255 (14%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GK ALVTG  SGIG A+A   A  GA V         E+ A+   ++  +A        +
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVN---DFGEEGAEAAAKVAGDA----GGSVI 53

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            + AD+  ++    ++      +G +DILVNNA +Q+ A  +EE   E  +R+    + S
Sbjct: 54  YLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVA-PIEEFPPEDWDRIIAVMLTS 112

Query: 162 HFFMTRHSLRHMNEGS--AIINTTSVEPLWHSPE--------------ARGLALQLVERG 205
            F   R +L HM +     IIN  S   L  SP                + LAL++ E G
Sbjct: 113 AFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHG 172

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSE-----------VPMKRAGQPIEVAPCYVF 254
           I VN + PG + TPL+    +++   +   E            P KR     EVA   ++
Sbjct: 173 ITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALY 232

Query: 255 LACNHCSSYITGQVL 269
           LA +  ++ ITGQ +
Sbjct: 233 LA-SDAAAQITGQAI 246

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  122 bits (307), Expect = 2e-33
 Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 35/255 (13%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            KVA++TG   GIGRA+A   A +G  +         E+ A+ T++ + EA      + +
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVL--ADLNLEEAAKSTIQEISEAGY----NAV 55

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           A+ AD+   ++ + ++D+ V  +G  D++VNNA +      +  I EE L++V+  N+F 
Sbjct: 56  AVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIA-PITPLLTITEEDLKKVYAVNVFG 114

Query: 162 HFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE----------ARGL----ALQLVER 204
             F  + + R       G  IIN +S+  +   P            RGL    A +L  +
Sbjct: 115 VLFGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPK 174

Query: 205 GIRVNGVAPGPIWTPL----------IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF 254
           GI VN  APG + T +          I      E  A+F S +P+ R  +P +VA    F
Sbjct: 175 GITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSF 234

Query: 255 LACNHCSSYITGQVL 269
           LA    S YITGQ +
Sbjct: 235 LASED-SDYITGQTI 248

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  119 bits (301), Expect = 1e-32
 Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 30/249 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GK A++TG  +GIG+ +A  +A  GA+V  + +         +    + +       
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN-------ADAANHVVDEIQQLGG 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE--ERLERVFR 156
              A   D+  ++    + D  ++  GK+DILVNNA      G  +  D       R + 
Sbjct: 61  QAFACRCDITSEQELSALADFALSKLGKVDILVNNAG----GGGPKPFDMPMADFRRAYE 116

Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSVE--------PLWHSPEA------RGLALQ 200
            N+FS F +++     M  N G  I+  TS+           + S +A      R +A  
Sbjct: 117 LNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFD 176

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L E+ IRVNG+APG I T  + S  + E   +     P++R GQP ++A   +FL C+  
Sbjct: 177 LGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFL-CSPA 235

Query: 261 SSYITGQVL 269
           +S+++GQ+L
Sbjct: 236 ASWVSGQIL 244

Length = 255

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  119 bits (300), Expect = 1e-32
 Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 44/250 (17%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +   K  L+TG  SGIG A A  +  +GA V                  + ++ K   + 
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQV----------------YGVDKQDKPDLSG 45

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV--QYKAGSVEEIDEERLERVFR 156
           +   +  DL  D      ++ + +    +DIL N A +   YK   + +   E  + +F 
Sbjct: 46  NFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYK--PLLDTSLEEWQHIFD 97

Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLW---------HSPEA-----RGLALQ 200
           TN+ S F +TR  L  M   +   IIN  S+              S  A     + LAL 
Sbjct: 98  TNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALD 157

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF-GSEVPMKRAGQPIEVAPCYVFLACNH 259
             + GI+V G+APG + TP+  + F     A +   E P+KR  +P EVA   +FLA   
Sbjct: 158 YAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGK 217

Query: 260 CSSYITGQVL 269
            + Y+ G ++
Sbjct: 218 -ADYMQGTIV 226

Length = 235

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 1e-32
 Identities = 81/262 (30%), Positives = 122/262 (46%), Gaps = 40/262 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L G+VAL+TGG SGIGRA+   +  EGA VA        E+ A E L  LR+       
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVL------ERSA-EKLASLRQR---FGD 52

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-QYKAGSVEEIDEERLE----R 153
             + +  D+    + +R VD+ V+A+GK+D  V NA +  Y   S+ +I  E L+     
Sbjct: 53  HVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNT-SLVDIPAETLDTAFDE 111

Query: 154 VFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVE--------PLWHSPE--ARGLALQLV 202
           +F  N+  +    + +L  +   G ++I T S          PL+ + +    GL  QL 
Sbjct: 112 IFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLA 171

Query: 203 ER---GIRVNGVAPGPIWTPLI-PSSFSEEESA---------QFGSEVPMKRAGQPIEVA 249
                 IRVNGVAPG   T L  P+S  + E++            +  P++ A QP +  
Sbjct: 172 YELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHT 231

Query: 250 PCYVFLACNHCSSYITGQVLHP 271
             YV LA    S  +TG V++ 
Sbjct: 232 GPYVLLASRRNSRALTGVVINA 253

Length = 263

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  119 bits (299), Expect = 2e-32
 Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 34/250 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ KV +VTG   GIGRA+A   A EG+ V     K  EE    ETL++++E       +
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEE--MNETLKMVKEN----GGE 57

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + + AD+   E C+ +    ++ YG  DILVNNA +         +D++ +++   T+ 
Sbjct: 58  GIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDF 116

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTSVE--------PLWHSPEA------RGLALQLVERG 205
            S  + ++   + M EG AI+N  SV          ++ + +A      + LAL+L  + 
Sbjct: 117 KSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPK- 175

Query: 206 IRVNGVAPGPIWTPLIPSSF-----SEEESAQFGSEVP-MKRAGQPIEVAPCYVFLACNH 259
           IRVN +APG + T L  S F     SE+E   F  +   M +   P EVA     +    
Sbjct: 176 IRVNAIAPGFVKTKLGESLFKVLGMSEKE---FAEKFTLMGKILDPEEVAEFVAAIL--- 229

Query: 260 CSSYITGQVL 269
               ITGQV 
Sbjct: 230 KIESITGQVF 239

Length = 252

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  118 bits (298), Expect = 4e-32
 Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 47/257 (18%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ KVA+VTGG  GIG+AV +    EG+ V   +   +   +  +  ++           
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNV-INFDIKEPSYNDVDYFKV----------- 51

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                 D+   E   + +D V++ YG+IDILVNNA ++   G++  ++E+  +R+   N+
Sbjct: 52  ------DVSNKEQVIKGIDYVISKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNV 104

Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLALQLVE 203
              F M+++++ +M   +   IIN  SV+    +  A              R +A+    
Sbjct: 105 NGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP 164

Query: 204 RGIRVNGVAPGPIWTPLIPSSFS----------EEESAQFGSEVPMKRAGQPIEVAPCYV 253
             IR   V PG I TPL+  +            E +  ++G   PMKR G+P EVA    
Sbjct: 165 T-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVA 223

Query: 254 FLACNHCSSYITGQVLH 270
           FLA +  +S+ITG+ + 
Sbjct: 224 FLASDL-ASFITGECVT 239

Length = 258

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  117 bits (295), Expect = 6e-32
 Identities = 74/252 (29%), Positives = 112/252 (44%), Gaps = 33/252 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG  +GIG A A   A EGA V    V +  +  A +            A  
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARV----VVADIDGGAAQ------AVVAQIAGG 50

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+  D+  ++    + +  V  +G +D+LVNNA   +   ++ + D    ++    N+
Sbjct: 51  ALALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINL 110

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLALQLVE 203
              F   RH+   M    G +I+N +S+      P                R LA +L  
Sbjct: 111 RGTFLCCRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRH 170

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM------KRAGQPIEVAPCYVFLAC 257
            GIR N +APG I TPL+ +  +  E A       +       R G+P +VA   VFL  
Sbjct: 171 AGIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLS 230

Query: 258 NHCSSYITGQVL 269
           +  +S+ITGQVL
Sbjct: 231 DD-ASFITGQVL 241

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  117 bits (294), Expect = 9e-32
 Identities = 74/242 (30%), Positives = 116/242 (47%), Gaps = 24/242 (9%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           VA+VTGG +GIG+A+A   A  GA+V    +KS+    A+        A        + +
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSE---GAEAVAA----AIQQAGGQAIGL 53

Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
             ++  +++ + VV   V+ +G I ILVNNA           + EE  E  F+ N+FS F
Sbjct: 54  ECNVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAF 113

Query: 164 FMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIR 207
            +++    HM    G AI+N +S+     +                 R LA  L  +GIR
Sbjct: 114 RLSQLCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIR 173

Query: 208 VNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQ 267
           VN VAPG + T  + S  + E         P+ R G+P ++A   +FL C+  S++++GQ
Sbjct: 174 VNAVAPGAVKTDALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFL-CSPASAWVSGQ 232

Query: 268 VL 269
           VL
Sbjct: 233 VL 234

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score =  116 bits (293), Expect = 1e-31
 Identities = 77/247 (31%), Positives = 122/247 (49%), Gaps = 27/247 (10%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KV L+TG   GIGRA A   A  G +V   Y +  +   A+ET + +R A          
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYAR--DAAAAEETADAVRAA----GGRACV 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           ++ D+  + +   + D V +A+G++D LVNNA +   +  + ++D  RL R+F TN+   
Sbjct: 57  VAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGA 116

Query: 163 FFMTRHSLRHMNE-----GSAIINTTSVEPLWHSPE---------------ARGLALQLV 202
           +   R + R ++      G AI+N +S+     SP                  GLA +L 
Sbjct: 117 YLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELG 176

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             G+RVN V PG I T +  S      +A+ G++ P+ RAG+  EVA   V+L  +  +S
Sbjct: 177 PHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSD-AAS 235

Query: 263 YITGQVL 269
           Y+TG +L
Sbjct: 236 YVTGALL 242

Length = 248

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  117 bits (294), Expect = 1e-31
 Identities = 74/247 (29%), Positives = 114/247 (46%), Gaps = 29/247 (11%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L+GKVA+VTGG  GIG A+A   A  GA VA  Y  +     A+E  E L +      K
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSA---PRAEEKAEELAKKYGVKTK 61

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A   D+   E+ ++   ++   +GKIDIL+ NA +        +   E+  +V   N
Sbjct: 62  ---AYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGIT-VHKPALDYTYEQWNKVIDVN 117

Query: 159 IFSHFFMTRHSLRHMNE---GSAIINTTSVE------PLWHSPE----------ARGLAL 199
           +   F   + + +   +   GS II T S+       P   +            A+ LA+
Sbjct: 118 LNGVFNCAQAAAKIFKKQGKGSLII-TASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAV 176

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           +  +  IRVN ++PG I T L      +E   ++ S +P+KR   P E+   Y++LA + 
Sbjct: 177 EWAKYFIRVNSISPGYIDTDL-TDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASDA 235

Query: 260 CSSYITG 266
            SSY TG
Sbjct: 236 -SSYTTG 241

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  116 bits (291), Expect = 4e-31
 Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 34/252 (13%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL GK AL+TG   GIG  +A  +A  GA +           D    +E L +       
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILL--------DISPEIEKLADELCGRGH 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A+ AD+    +    +       G+IDILVNNA V  + GS  ++ +E  +     N
Sbjct: 55  RCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGV-CRLGSFLDMSDEDRDFHIDIN 113

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSV---------EPLWHSPEA------RGLALQL 201
           I   + +T+  L  M   +   I+  +SV         E  +   +A      + LA++ 
Sbjct: 114 IKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEY 173

Query: 202 VERGIRVNGVAPGPIWTPLIP-----SSFSEEESA--QFGSEVPMKRAGQPIEVAPCYVF 254
            + GIRVN + PG + TP+       S+  + ES   +    +P++R   P+EV     F
Sbjct: 174 AQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAF 233

Query: 255 LACNHCSSYITG 266
           LA +  SSY+TG
Sbjct: 234 LASDE-SSYLTG 244

Length = 263

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  113 bits (286), Expect = 2e-30
 Identities = 81/246 (32%), Positives = 120/246 (48%), Gaps = 28/246 (11%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA-QETLEILREAKTSDAKDP 100
            KVAL+TGG   IG A+A      G  VA  Y +S  E DA    L  LR          
Sbjct: 6   AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR------PGSA 59

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
            A+ ADL   +    +V   V A+G++D LVNNA+  +    +  I E + + +F +N+ 
Sbjct: 60  AALQADLLDPDALPELVAACVAAFGRLDALVNNASS-FYPTPLGSITEAQWDDLFASNLK 118

Query: 161 SHFFMTRHSLRH--MNEGSAIINTTSVE--------PLWHSPEA------RGLALQLVER 204
           + FF+++ +        G AI+N T +         P++ + +A      R LAL+L   
Sbjct: 119 APFFLSQAAAPQLRKQRG-AIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAPE 177

Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI 264
            +RVN VAPG I  P   +SF EE      +  P+KR G P ++A    FL  +  +S+I
Sbjct: 178 -VRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD--ASFI 234

Query: 265 TGQVLH 270
           TGQ+L 
Sbjct: 235 TGQILA 240

Length = 249

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  113 bits (284), Expect = 3e-30
 Identities = 79/257 (30%), Positives = 109/257 (42%), Gaps = 35/257 (13%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +  GKV +VTG   GIGR VA   A EGA V           D  E +  +     +   
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLV--------DRSELVHEVLAEILAAGD 52

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                +ADL      + VV   V  +G++D+L+NN      A   E  +EE++E   R +
Sbjct: 53  AAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRS 112

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEP--LWHSP--EARG--------LALQLVER 204
           +F   +  R  L HM E     I+N +S+    ++  P   A+G        LA +    
Sbjct: 113 LFPTLWCCRAVLPHMLERQQGVIVNVSSIATRGIYRIPYSAAKGGVNALTASLAFEHARD 172

Query: 205 GIRVNGVAPG----PIWT-PLIPSSFSEEESA-------QFGSEVPMKRAGQPIEVAPCY 252
           GIRVN VAPG    P    P   +  SE+E         Q      M R G   E     
Sbjct: 173 GIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAI 232

Query: 253 VFLACNHCSSYITGQVL 269
           +FLA +  +SYITG VL
Sbjct: 233 LFLASDE-ASYITGTVL 248

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 3e-30
 Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 33/250 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S +L G+VA++TGG SGIG A A   A EGATV    +  +  K A + +          
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV---------- 51

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVF 155
               + +  D+  ++    + D     YG +DI  NNA +   +  S+     +  +RV 
Sbjct: 52  --GGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQ 109

Query: 156 RTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA---------------RGLA 198
             N+ S +   + +L HM      +IINT S   +  S  +               R L 
Sbjct: 110 DVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELG 169

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           +Q   +GIRVN + PGP+ TPL+   F++  E +A+    VPM R  +P E+A    FLA
Sbjct: 170 VQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLA 229

Query: 257 CNHCSSYITG 266
            +  +S+IT 
Sbjct: 230 SDD-ASFITA 238

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 5e-30
 Identities = 75/249 (30%), Positives = 109/249 (43%), Gaps = 35/249 (14%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
            N+L GKVALVTG   GIG A+A  +A EGA VA   +   +   A+     +       
Sbjct: 2   MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVA---LADLDAALAERAAAAIARDVAGA 58

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               +A+ AD+    +    V     A+G +D+LVNNA +   A  +   DE+   R F 
Sbjct: 59  --RVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDED-WRRCFA 115

Query: 157 TNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS----------PEA--------RG 196
            ++   +   R  L  M E    +I+N  S     H+          P A        R 
Sbjct: 116 VDLDGAWNGCRAVLPGMVERGRGSIVNIAST----HAFKIIPGCFPYPVAKHGLLGLTRA 171

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPS---SFSEEESAQFGSE--VPMKRAGQPIEVAPC 251
           L ++   R +RVN +APG I T L      +  +  +A+  +    PMKR G+P EVA  
Sbjct: 172 LGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMT 231

Query: 252 YVFLACNHC 260
            VFLA +  
Sbjct: 232 AVFLASDEA 240

Length = 260

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 5e-30
 Identities = 84/266 (31%), Positives = 116/266 (43%), Gaps = 49/266 (18%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +  GKV +VTG   GIGR VA   A EGA V           D  E +  +     + 
Sbjct: 3   NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLV--------DRSELVHEVAAELRAA 54

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
             + +A++ADL      +  +   V A+G+ID+L+NN      A   EE +EE++E   R
Sbjct: 55  GGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIR 114

Query: 157 TNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEARG------------------ 196
            ++F   +  R  L HM    G AI+N +S+         RG                  
Sbjct: 115 RSLFPTLWCCRAVLPHMLAQGGGAIVNVSSI-------ATRGINRVPYSAAKGGVNALTA 167

Query: 197 -LALQLVERGIRVNGVAPG-----PIWTPLIPSSFSEEESAQFGSEV-------PMKRAG 243
            LA +  E GIRVN VAPG     P   P   +  SE+E A +   V        MKR G
Sbjct: 168 SLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYG 227

Query: 244 QPIEVAPCYVFLACNHCSSYITGQVL 269
              E     +FLA +  +SYITG VL
Sbjct: 228 TIDEQVAAILFLASDE-ASYITGTVL 252

Length = 260

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  111 bits (280), Expect = 1e-29
 Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 27/247 (10%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYV-KSQEEKDAQETLEILREAKTSDAKDPM 101
           ++ALVTGG  GIG A+    A +G  VA       +  +   +    L         D  
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-------GFDFR 53

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+   E+CK  V +V    G ID+LVNNA +  +  + +++  E+   V  TN+ S
Sbjct: 54  VVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGIT-RDATFKKMTYEQWSAVIDTNLNS 112

Query: 162 HFFMTRHSLRHMNEGS--AIINTTSVEPL--------WHSPEA------RGLALQLVERG 205
            F +T+  +  M E     IIN +SV           + + +A      + LA +   +G
Sbjct: 113 VFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKG 172

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           + VN ++PG I T ++  +  E+      +++P+ R G+P E+A    FLA    + YIT
Sbjct: 173 VTVNTISPGYIATDMV-MAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEE-AGYIT 230

Query: 266 GQVLHPN 272
           G  L  N
Sbjct: 231 GATLSIN 237

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 2e-29
 Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 30/245 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLE-ILREAKTSDA 97
            L GKVA+VTGG SGIG A+A  +A +GA VA          D  E +  +  +    +A
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALL--------DRSEDVAEVAAQLLGGNA 63

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
           K    +  D+   ++ +  V  V++A+G+IDILVN+A V   A   E++ EE  ++    
Sbjct: 64  K---GLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLA-PAEDVSEEDWDKTIDI 119

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQL 201
           N+   F M +   RHM    G  I+N  S   +                    + LAL+ 
Sbjct: 120 NLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEW 179

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              GI VN ++P  + T L   +++ E+  +    +P  R   P E+A   +FLA +  +
Sbjct: 180 GPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDA-A 238

Query: 262 SYITG 266
           + ITG
Sbjct: 239 AMITG 243

Length = 255

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 2e-29
 Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 29/249 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK+ALVTG   GIG A+A   A +GA V    V S++    Q   + +  A       
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVI---VSSRKLDGCQAVADAIVAAGGKAE-- 60

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A++  +G  E    +   +   +G++DILVNNAA     G + + D    ++    NI
Sbjct: 61  --ALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNI 118

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP-EARGL---------------ALQL 201
             +FFM+  + + M E  G +I+N  SV  +  SP + +G+               A + 
Sbjct: 119 RGYFFMSVEAGKLMKEQGGGSIVNVASVNGV--SPGDFQGIYSITKAAVISMTKAFAKEC 176

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG-SEVPMKRAGQPIEVAPCYVFLACNHC 260
              GIRVN + PG   T    + F  +   +   + +P++R  +P E+A   ++LA +  
Sbjct: 177 APFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASD-A 235

Query: 261 SSYITGQVL 269
           SSY TG+ L
Sbjct: 236 SSYTTGECL 244

Length = 252

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 2e-29
 Identities = 73/263 (27%), Positives = 111/263 (42%), Gaps = 43/263 (16%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE-AKTSDAK 98
           L+GKV +V+G   G+GR +A   A  GA V            A  T E L E A   D  
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVL----------AARTAERLDEVAAEIDDL 52

Query: 99  --DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               +A+  D+  ++ C  +V   +  +G++D LVNNA        + + D      V  
Sbjct: 53  GRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIE 112

Query: 157 TNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE---------------ARGLALQ 200
            N+     +T+     + E G +I+   S+  L HS                 ++ LA +
Sbjct: 113 LNVLGTLRLTQAFTPALAESGGSIVMINSMV-LRHSQPKYGAYKMAKGALLAASQSLATE 171

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG-----------SEVPMKRAGQPIEVA 249
           L  +GIRVN VAPG IW   +   F   ++ ++G           +   +KR     EVA
Sbjct: 172 LGPQGIRVNSVAPGYIWGDPLKGYF-RHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVA 230

Query: 250 PCYVFLACNHCSSYITGQVLHPN 272
              +FLA +  +  ITGQ L  N
Sbjct: 231 SAVLFLASDL-ARAITGQTLDVN 252

Length = 258

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  110 bits (277), Expect = 3e-29
 Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 33/253 (13%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GKVA++TGG SGIG A A  +A  GA V    +   ++   Q     L +   S   
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVV---IADIDDDAGQAVAAELGDPDIS--- 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-QYKAGSVEEIDEERLERVFRT 157
               +  D+  + + +  VD  V  +G++DI+ NNA V      S+ E   E  ERV   
Sbjct: 55  ---FVHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDV 111

Query: 158 NIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLW-----HSPEA---------RGLALQ 200
           N++  F  T+H+ R M    +GS I++  SV  +      H+  A         R  A +
Sbjct: 112 NVYGAFLGTKHAARVMIPAKKGS-IVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATE 170

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESA----QFGSEVPMKRAGQPIEVAPCYVFLA 256
           L E GIRVN V+P  + TPL+ + F  E+ A      G+      A +P ++A   ++LA
Sbjct: 171 LGEHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLA 230

Query: 257 CNHCSSYITGQVL 269
            +  S Y++GQ L
Sbjct: 231 SDD-SRYVSGQNL 242

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 2e-28
 Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +L GKVA++TG  SGIGRA A  +A EGA V     + Q E      L+ L     ++ 
Sbjct: 2   MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVG-ARRQAE------LDQLVAEIRAEG 54

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
            + +A++ D+  +   K +V   V  +G +DI  NNA    + G V E+  E       T
Sbjct: 55  GEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLAT 114

Query: 158 NIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHS---PE--------------ARGL 197
           N+ S F   +H +  M     GS I  +T V    H+   P                + L
Sbjct: 115 NLTSAFLGAKHQIPAMLARGGGSLIFTSTFVG---HTAGFPGMAAYAASKAGLIGLTQVL 171

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVFLA 256
           A +   +GIRVN + PG   TP+  +     E+  F + +  +KR  QP E+A   +FLA
Sbjct: 172 AAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLA 231

Query: 257 CNHCSSYITG 266
            +  +S++TG
Sbjct: 232 SDA-ASFVTG 240

Length = 254

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 5e-28
 Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 32/251 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
              GK  +V GG SGI   +A  +A  GA VA   V S+ ++     +  L++A      
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVA---VASRSQEKVDAAVAQLQQA----GP 58

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           + + +SAD+      +    ++ + +G ID+LV+ AA  + A     +     + V   +
Sbjct: 59  EGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPA-PAAGMSANGFKTVVDID 117

Query: 159 IFSHFFMTRHSLRHMNE-GSAIINTT---SVEPLWHSPEA-----------RGLALQLVE 203
           +   F + + +   +   G++II  +   +  P+                 R LAL+   
Sbjct: 118 LLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGP 177

Query: 204 RGIRVNGVAPGPI-----WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            GIRVN + PGPI        L P   S E  A     VP+KR G   ++A   +FLA +
Sbjct: 178 EGIRVNSIVPGPIAGTEGMARLAP---SPELQAAVAQSVPLKRNGTKQDIANAALFLASD 234

Query: 259 HCSSYITGQVL 269
             +SYITG VL
Sbjct: 235 M-ASYITGVVL 244

Length = 264

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  107 bits (268), Expect = 7e-28
 Identities = 80/254 (31%), Positives = 115/254 (45%), Gaps = 36/254 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTGG  GIG+ +A   A +G  VA   V    E+ A+ET + + +A        +A
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVA---VADLNEETAKETAKEINQAGG----KAVA 53

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              D+   +     +D+    +G  D++VNNA V      + EI EE L++V+  N+   
Sbjct: 54  YKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGV 112

Query: 163 FFMTRHSLRH---MNEGSAIINTTSVEPLWHSPE----------ARGL----ALQLVERG 205
            F  + + R       G  IIN  S+     +P            RGL    A +L  +G
Sbjct: 113 LFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKG 172

Query: 206 IRVNGVAPGPIWTPL---IPSSFSE-------EESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           I VN   PG + TP+   I    SE       E   +F SE+ + R  +P +VA    FL
Sbjct: 173 ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL 232

Query: 256 ACNHCSSYITGQVL 269
           A    S YITGQ +
Sbjct: 233 ASED-SDYITGQSI 245

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 1e-27
 Identities = 79/266 (29%), Positives = 114/266 (42%), Gaps = 31/266 (11%)

Query: 23  MEPTPQFTSHDYKPSNKLRGKVALVTGG-DSGIGRAVAHCYALEGATVAFTYVKSQEEKD 81
           +   P++          L GKV LVT    +GIG A A     EGA V    +    E+ 
Sbjct: 2   LSTAPKYVP----GHGLLAGKVVLVTAAAGTGIGSATARRALEEGARV---VISDIHERR 54

Query: 82  AQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG 141
             ET + L            A+  D+  +     ++D  V   G++D+LVNNA +  +  
Sbjct: 55  LGETADELAAELGLGR--VEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTP 112

Query: 142 SVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLW-------HS 191
            V+  D+E   RV    +   F  TR +LR+M     G  I+N  SV   W       H 
Sbjct: 113 VVDMTDDE-WSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLG-WRAQHGQAHY 170

Query: 192 PEA--------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAG 243
             A        R  AL+  E G+R+N VAP     P +    S E   +  +     RA 
Sbjct: 171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAA 230

Query: 244 QPIEVAPCYVFLACNHCSSYITGQVL 269
           +P EVA    FLA ++ SSY+TG+V+
Sbjct: 231 EPWEVANVIAFLASDY-SSYLTGEVV 255

Length = 262

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  105 bits (264), Expect = 3e-27
 Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 25/247 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  +  L+TGG  G+GRA+A   A +GA V    +     +   + +    EA    A  
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA-- 61

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + ++ D+      +  +D  V  +G++DILVNNA +   A +  E+  E  + V   N+
Sbjct: 62  -LGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDA-AFAELSIEEWDDVIDVNL 119

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEPL--------WHSPEA------RGLALQLV 202
              F +T+ +L  M     G  I+N  SV  +        + + +A      + LA +L 
Sbjct: 120 DGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELA 179

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            RGI VN VAPG I TP+  ++   E        VP++R G+P EVA    FL  +  +S
Sbjct: 180 PRGITVNAVAPGAINTPMADNAAPTEHLLN---PVPVQRLGEPDEVAALVAFLVSDA-AS 235

Query: 263 YITGQVL 269
           Y+TGQV+
Sbjct: 236 YVTGQVI 242

Length = 249

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  105 bits (263), Expect = 4e-27
 Identities = 76/258 (29%), Positives = 109/258 (42%), Gaps = 39/258 (15%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK AL+TG   GIGRA A  Y  EGA VA   +  +    A                 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLE----AARATAAEIGPAA----- 51

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             AIS D+    +  R V  +V+ +G IDILVNNAA+ +    + +I  E  +R+F  N+
Sbjct: 52  -CAISLDVTDQASIDRCVAALVDRWGSIDILVNNAAL-FDLAPIVDITRESYDRLFAINV 109

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSV-----EPL---WHSPEA------RGLALQLV 202
               FM +   R M     G  IIN  S      E L   + + +A      +   L L+
Sbjct: 110 SGTLFMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI 169

Query: 203 ERGIRVNGVAPGPIWTPL---IPSSFSE-------EESAQFGSEVPMKRAGQPIEVAPCY 252
             GI VN +APG +       + + F+        E+    G  VP  R G+  ++    
Sbjct: 170 RHGINVNAIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMA 229

Query: 253 VFLACNHCSSYITGQVLH 270
           +FLA    + YI  Q  +
Sbjct: 230 IFLASTD-ADYIVAQTYN 246

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  104 bits (262), Expect = 4e-27
 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 29/248 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG ++G+G+ +A   A  GA +              ET + +     +  + 
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE-----PSETQQQV----EALGRR 53

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            ++++ADL   E  K +VD  V  +G IDILVNNA +  +A +  E  E+  + V   N+
Sbjct: 54  FLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAE-EFSEKDWDDVMNVNL 112

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTS---------VEPLWHSPEA-----RGLALQLV 202
            S FF+T+ + +H      G  IIN  S         V     S  A     + LA +  
Sbjct: 113 KSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWA 172

Query: 203 ERGIRVNGVAPGPIWTP-LIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            +GI VN +APG + T         E+ +A     +P  R G P ++    VFLA +  S
Sbjct: 173 AKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLA-SSAS 231

Query: 262 SYITGQVL 269
            Y+ G  L
Sbjct: 232 DYVNGYTL 239

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  109 bits (273), Expect = 5e-27
 Identities = 75/273 (27%), Positives = 114/273 (41%), Gaps = 40/273 (14%)

Query: 16  QPGKEH-VMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV 74
             G       P+P               +V  +TGG  GIGRAVA  +A  G  +     
Sbjct: 252 GSGPASTAQAPSPLAE----------SPRVVAITGGARGIGRAVADRFAAAGDRLLII-- 299

Query: 75  KSQEEKDAQETLEILREAKTSDAKDP-MAISADLGFDENCKRVVDEVVNAYGKIDILVNN 133
               ++D  E  + L EA      D  +++ AD+  +   +    ++   +G++D+LVNN
Sbjct: 300 ----DRD-AEGAKKLAEA----LGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNN 350

Query: 134 AAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE 193
           A +        E   E   RV+  N+   F   R + R M++G  I+N  S+  L   P 
Sbjct: 351 AGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP 410

Query: 194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS--SFSEEESAQFGSEV 237
                         +R LA +    GIRVN VAPG I TP + +  +    +       +
Sbjct: 411 RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRI 470

Query: 238 PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
           P+ R G P EVA    FLA +  +SY+ G  L 
Sbjct: 471 PLGRLGDPEEVAEAIAFLA-SPAASYVNGATLT 502

Length = 520

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 5e-27
 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 32/254 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L  +VA+VTG   G+G A+A  +A  GA V    + ++ E    E  E +R A     +
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVL---IAARTESQLDEVAEQIRAA----GR 59

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               ++ADL   E    +  + V A+G++DI+VNN         +    ++ L   F  N
Sbjct: 60  RAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKD-LADAFTFN 118

Query: 159 IFSHFFMTRHSLRHMNE---GSAIINTTSV----------------EPLWHSPEARGLAL 199
           + +   +T  ++  M E   G ++IN +S                   L H    R  AL
Sbjct: 119 VATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHY--TRLAAL 176

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            L  R IRVN +APG I T  +    + +E  A      P++R G P ++A   V+LA +
Sbjct: 177 DLCPR-IRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLA-S 234

Query: 259 HCSSYITGQVLHPN 272
              SY+TG+ L  +
Sbjct: 235 PAGSYLTGKTLEVD 248

Length = 263

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 6e-27
 Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 44/253 (17%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+V LVTGG  GIG  +A  +   GATV     +   E       E            
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATV-VVCGRRAPETVDGRPAEF----------- 51

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGS----VEEIDEERLERVF 155
               +AD+   +    +VD +V  +G++D+LVNNA      GS      E      E++ 
Sbjct: 52  ---HAADVRDPDQVAALVDAIVERHGRLDVLVNNA-----GGSPYALAAEASPRFHEKIV 103

Query: 156 RTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLA 198
             N+ +   + + +   M     G +I+N  SV     SP                R LA
Sbjct: 104 ELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLA 163

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           ++   + +RVN V  G + T      + + E  A   + VP+ R   P ++A   +FLA 
Sbjct: 164 VEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLAS 222

Query: 258 NHCSSYITGQVLH 270
           +  +SY++G  L 
Sbjct: 223 DL-ASYVSGANLE 234

Length = 252

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  104 bits (260), Expect = 1e-26
 Identities = 77/255 (30%), Positives = 114/255 (44%), Gaps = 36/255 (14%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            KVALVTG   GIG A+A     +G  VA   +    E+ AQ   + L +         +
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVA---IVDYNEETAQAAADKLSKDGG----KAI 54

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           A+ AD+   +     V +VV+ +G ++++VNNA V      +E I EE+ ++V+  N+  
Sbjct: 55  AVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVA-PTTPIETITEEQFDKVYNINVGG 113

Query: 162 HFFMTRHSLRH---MNEGSAIINTTSVEPLWHSPE----------ARGL----ALQLVER 204
             +  + +      +  G  IIN TS   +  +PE           RGL    A  L   
Sbjct: 114 VIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASE 173

Query: 205 GIRVNGVAPGPIWTPL---IPSSFSEEES-------AQFGSEVPMKRAGQPIEVAPCYVF 254
           GI VN  APG + TP+   I     E           QF  ++ + R  +P +VA C  F
Sbjct: 174 GITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSF 233

Query: 255 LACNHCSSYITGQVL 269
           LA    S YITGQ +
Sbjct: 234 LA-GPDSDYITGQTI 247

Length = 256

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  104 bits (260), Expect = 1e-26
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 35/253 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
            + L  KVALVT    GIG A+A   A +GA V  +  K Q    A  TL+        +
Sbjct: 5   RDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQ-------GE 57

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                     +G  E+ +R+V   VN +G +DILV+NAAV    G++ +  EE  +++  
Sbjct: 58  GLSVTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILD 117

Query: 157 TNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQ 200
            N+ +   MT+  +  M +  G +++  +SV      P                + LA +
Sbjct: 118 VNVKATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPE 177

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFS------EEESAQFGSEVPMKRAGQPIEVAPCYVF 254
           L  R IRVN +APG     LI +SFS      +         + ++R GQP + A    F
Sbjct: 178 LAPRNIRVNCLAPG-----LIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSF 232

Query: 255 LACNHCSSYITGQ 267
           L C+  +SYITG+
Sbjct: 233 L-CSEDASYITGE 244

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  103 bits (259), Expect = 1e-26
 Identities = 73/247 (29%), Positives = 105/247 (42%), Gaps = 36/247 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTSDAKDP 100
            VALVTG    IGRA+A   A EG  V   Y +S+ E      E   +   A        
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSA-------- 52

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
           + + ADL     C  +V     A+G+ D+LVNNA+  +    + +  E+    +F  N+ 
Sbjct: 53  VLVQADLSDFAACADLVAAAFRAFGRCDVLVNNASA-FYPTPLGQGSEDAWAELFGINLK 111

Query: 161 SHFFMTRH---SLRHMNEGSAIIN----TTSVEPLWHSPEA----------RGLALQLVE 203
           + + + +     L     GS IIN     T      +              R  AL+L  
Sbjct: 112 APYLLIQAFARRLAGSRNGS-IINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP 170

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
             IRVNG+APG I   L+P     E       +VP+KR     E+A   +FL     S+Y
Sbjct: 171 N-IRVNGIAPGLI---LLPEDMDAEYRENALRKVPLKRRPSAEEIADAVIFLL---DSNY 223

Query: 264 ITGQVLH 270
           ITGQ++ 
Sbjct: 224 ITGQIIK 230

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  104 bits (260), Expect = 1e-26
 Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 26/247 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+VALVTG   G+G  +A   A  GA V    V  +     +  +  LR A  +    
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVL---VNGRNAATLEAAVAALRAAGGAAE-- 63

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A++ D+  +E        +   +G++DILVNN   + +   + E+D+  +  +  T++
Sbjct: 64  --ALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRP-LAELDDAAIRALLETDL 120

Query: 160 FSHFFMTRHSLRHMNEGSA--IINTTSVE-PLWHSPEA-------------RGLALQLVE 203
            +   ++R + + M       II  TS+   +  + +A             R LA +   
Sbjct: 121 VAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP 180

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE-VPMKRAGQPIEVAPCYVFLACNHCSS 262
            GI  N +APG   T    +  ++     + ++  P+ R G+P E+A   VFLA +  +S
Sbjct: 181 HGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLA-SPAAS 239

Query: 263 YITGQVL 269
           Y+ G VL
Sbjct: 240 YVNGHVL 246

Length = 256

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score =  103 bits (258), Expect = 1e-26
 Identities = 82/244 (33%), Positives = 114/244 (46%), Gaps = 34/244 (13%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
               GK  LV GG  GIG A+   +  +GA V FTY  S   KDA E L     A+ + A
Sbjct: 2   GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS---KDAAERL-----AQETGA 53

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                 SAD       +  V +VV   G +DILV NA +    G   E+D + ++R+F+ 
Sbjct: 54  TAVQTDSAD-------RDAVIDVVRKSGALDILVVNAGIAV-FGDALELDADDIDRLFKI 105

Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVE----PLWHSPE-----------ARGLALQLV 202
           NI + +  +  + R M EG  II   SV     P+                ARGLA    
Sbjct: 106 NIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFG 165

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            RGI +N V PGPI T   P++   ++     S + +KR G+P EVA    +LA    +S
Sbjct: 166 PRGITINVVQPGPIDTDANPANGPMKD--MMHSFMAIKRHGRPEEVAGMVAWLAGPE-AS 222

Query: 263 YITG 266
           ++TG
Sbjct: 223 FVTG 226

Length = 237

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  103 bits (260), Expect = 1e-26
 Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 32/252 (12%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            VALVTGG  GIG  +A   A  G  +A       ++++   T + LR    +   + + 
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDR--PDDEELAATQQELR----ALGVEVIF 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA-GSVEEIDEERLERVFRTNIFS 161
             AD+      + ++D    A+G+ID LVNNA V  K  G + ++  E  +RV   N+  
Sbjct: 57  FPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRG 116

Query: 162 HFFMTRHSLRHMNEGS--------AIINTTSVEPLWHSPE--------------ARGLAL 199
            FF+T+   + M            +I+  +SV  +  SP               A+  A 
Sbjct: 117 PFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAA 176

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF-GSEVPMKRAGQPIEVAPCYVFLACN 258
           +L E GI V  V PG I T +  +  + +  A      VPM R G+P +VA     LA  
Sbjct: 177 RLAEEGIGVYEVRPGLIKTDMT-APVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASG 235

Query: 259 HCSSYITGQVLH 270
               Y TGQ +H
Sbjct: 236 DL-PYSTGQAIH 246

Length = 256

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  103 bits (259), Expect = 1e-26
 Identities = 76/259 (29%), Positives = 108/259 (41%), Gaps = 34/259 (13%)

Query: 39  KLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFT----YVKSQEEKDAQETLEILREA 92
            L  K+ALVTG    +GIG AV    A +G  + FT    Y K+       +   +L+E 
Sbjct: 2   PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
             S       +  DL       RV   V    G   IL+NNAA       +EE+  E+L+
Sbjct: 62  IESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYS-THTRLEELTAEQLD 120

Query: 153 RVFRTNI-----FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------------- 193
           + +  N+      S  F  ++  +    G  IIN TS + L   P+              
Sbjct: 121 KHYAVNVRATMLLSSAFAKQYDGKA---GGRIINLTSGQSLGPMPDELAYAATKGAIEAF 177

Query: 194 ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            + LA +L E+GI VN V PGP  T  I          +F    P  R G+P++ A    
Sbjct: 178 TKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKF----PQGRVGEPVDAARLIA 233

Query: 254 FLACNHCSSYITGQVLHPN 272
           FL     + +ITGQV+H  
Sbjct: 234 FLVSEE-AKWITGQVIHSE 251

Length = 256

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  103 bits (258), Expect = 2e-26
 Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 42/257 (16%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           + GK+ LVTGG  GIGR +A  +   GA V  +  K++   DA E L        S   +
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL--------SAYGE 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +AI ADL  +E  + +V  V     ++D+LVNNA   + A  +E   E   ++V   N+
Sbjct: 56  CIAIPADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGA-PLEAFPESGWDKVMDINV 114

Query: 160 FSHFFMTR-------------HSLRHMNEGS-AIINTTSVEPLWHSPE-------ARGLA 198
            S FF+T+             +  R +N GS A I  + +E   +           R LA
Sbjct: 115 KSVFFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLA 174

Query: 199 LQLVERGIRVNGVAPGPIWTPLI------PSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
            +L    I VN +APG   + +       P++   EE       +P+ R G+P ++A   
Sbjct: 175 KELAGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEE-----KSIPLGRWGRPEDMAGLA 229

Query: 253 VFLACNHCSSYITGQVL 269
           + L  +   +Y+TG V+
Sbjct: 230 IML-ASRAGAYLTGAVI 245

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  102 bits (257), Expect = 2e-26
 Identities = 68/248 (27%), Positives = 108/248 (43%), Gaps = 40/248 (16%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKVAL+T    GIGRA+A  +A EGA V  T +  ++ K+ +    I    +  D  D  
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERGPGI--TTRVLDVTD-- 57

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
                       K  V  +    G+ID+L N A      GS+ + +++  +     N+ S
Sbjct: 58  ------------KEQVAALAKEEGRIDVLFNCAGF-VHHGSILDCEDDDWDFAMNLNVRS 104

Query: 162 HFFMTRHSLRHMNE--GSAIINTTSV---------EPLWHSPEA------RGLALQLVER 204
            + M +  L  M      +IIN +SV           ++ + +A      + +A    ++
Sbjct: 105 MYLMIKAVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQ 164

Query: 205 GIRVNGVAPGPIWTPLI-----PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           GIR N + PG + TP +          EE    F +  P+ R   P EVA   V+LA + 
Sbjct: 165 GIRCNAICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDE 224

Query: 260 CSSYITGQ 267
            S+Y+TG 
Sbjct: 225 -SAYVTGT 231

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  103 bits (259), Expect = 2e-26
 Identities = 75/265 (28%), Positives = 119/265 (44%), Gaps = 42/265 (15%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ KVA++TGG   +G A+A   A  GA VA            QE  + + +  T+    
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRN-------QEKGDKVAKEITALGGR 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE-------------EI 146
            +A++AD+    + +R  +E+V  +G +DIL+N A   +   + +             ++
Sbjct: 56  AIALAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDL 115

Query: 147 DEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVE---PLWHSPEARG----- 196
           DEE  E VF  N+   F  ++   + M E  G +IIN +S+    PL   P         
Sbjct: 116 DEEGWEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAV 175

Query: 197 ------LALQLVERGIRVNGVAPGPIWTPL------IPSSFSEEESAQFGSEVPMKRAGQ 244
                 LA++    G+RVN +APG   TP        P     + S +     PM R G+
Sbjct: 176 SNFTQWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGK 235

Query: 245 PIEVAPCYVFLACNHCSSYITGQVL 269
           P E+    +FLA    SS++TG V+
Sbjct: 236 PEELLGALLFLASEKASSFVTGVVI 260

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  102 bits (257), Expect = 3e-26
 Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 28/244 (11%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A +TG   G+GRA+A   A +GA V  T +      DA    EI        A    A  
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAF-AAEINAAHGEGVA---FAAV 57

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
            D+  +   + ++ +  +A G + +LVNNA V    G++E+I+ +   RV   N+ S F 
Sbjct: 58  QDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGAIEQIELDEWRRVMAINVESIFL 116

Query: 165 MTRHSLRHMNEG--SAIINTTSVEPLWHSPE--------------ARGLALQLVERG--I 206
             +H+L ++     ++I+N +SV      P+               + +AL    RG  +
Sbjct: 117 GCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDV 176

Query: 207 RVNGVAPGPIWTPL---IPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           R N + P  I T +   I     EEE+  +    VP+ R G+P +VA   ++LA +  S 
Sbjct: 177 RCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDE-SR 235

Query: 263 YITG 266
           ++TG
Sbjct: 236 FVTG 239

Length = 251

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  102 bits (257), Expect = 3e-26
 Identities = 78/261 (29%), Positives = 119/261 (45%), Gaps = 41/261 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L+G+VAL+TGG SG+GRA+   +  EGA VA    +S E+      +  LR        
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVA-VLDRSAEK------VAELRADFGDAVV 53

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-QYKAGSVEEIDEERL----ER 153
               +  D+    + +R V   V  +GK+D  + NA +  Y   S+ +I EE+L    + 
Sbjct: 54  ---GVEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYST-SLVDIPEEKLDEAFDE 109

Query: 154 VFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVE--------PLWHSPE--ARGLALQL 201
           +F  N+  +    + +L  +   EGS I  T S          PL+ + +    GL  QL
Sbjct: 110 LFHINVKGYILGAKAALPALYATEGSVIF-TVSNAGFYPGGGGPLYTASKHAVVGLVKQL 168

Query: 202 V-ERG--IRVNGVAPGPIWTPLI-PSS--FSEEESAQFGSE------VPMKRAGQPIEVA 249
             E    IRVNGVAPG + T L  P+S    E   +    +      +P+  A +P +  
Sbjct: 169 AYELAPHIRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYT 228

Query: 250 PCYVFLACNHCSSYITGQVLH 270
             YVFLA    +   TG V++
Sbjct: 229 GAYVFLASRGDNRPATGTVIN 249

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 4e-26
 Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 29/251 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG   GIGRA+A   A +GA VA  Y ++++  D     E +RE +++  K 
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAAD-----ETIREIESNGGK- 57

Query: 100 PMAISADLGFDENCKRVVDEVVN------AYGKIDILVNNAAVQYKAGSVEEIDEERLER 153
              I ADL   +  K++V+++ N         +IDILVNNA +  + G++E   EE  + 
Sbjct: 58  AFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQ-GTIENTTEEIFDE 116

Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL--WHSPEARG------------LAL 199
           +   NI + FF+ + +L  +     +IN +S E    +    A G            LA 
Sbjct: 117 IMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAK 176

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVAPCYVFLACN 258
            L ERGI VN + PG   T +      + E   F +   +  R GQ  ++A    FLA +
Sbjct: 177 HLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASS 236

Query: 259 HCSSYITGQVL 269
             S ++TGQ++
Sbjct: 237 D-SRWVTGQII 246

Length = 254

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  102 bits (256), Expect = 4e-26
 Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 25/246 (10%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K+ALVTG   GIG A+A     +G  V  TY    +            E +         
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVR------L 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              D+   E C   + E+    G +DILVNNA +  +    + +  +    V  TN+ S 
Sbjct: 57  KELDVTDTEECAEALAEIEEEEGPVDILVNNAGIT-RDSVFKRMSHQEWNDVINTNLNSV 115

Query: 163 FFMTRHSLRHMNE--GSAIINTTSV--------EPLWHSPEA------RGLALQLVERGI 206
           F +T+     M E     IIN +SV        +  + + +A      + LA +    GI
Sbjct: 116 FNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGI 175

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN +APG I TP++      E      +++PMKR G P E+A    FL  +  + +ITG
Sbjct: 176 TVNCIAPGYIATPMV-EQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFL-VSEAAGFITG 233

Query: 267 QVLHPN 272
           + +  N
Sbjct: 234 ETISIN 239

Length = 245

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 4e-26
 Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 27/248 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L GKVA+VTGG++G+G+  A   A  GA +  T   +  +    ET  ++ +      +
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWD----ETRRLIEKE----GR 63

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               +  DL   E+ ++VV E +  +GKIDILVNNA    +A  + E  +E    V   N
Sbjct: 64  KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRA-PLLEYKDEDWNAVMDIN 122

Query: 159 IFSHFFMTRHSLRHM-NEGSA-IINTTS---------VEPLWHSPEA-----RGLALQLV 202
           + S + +++   + M  +GS  IIN  S         V     S        +  A +L 
Sbjct: 123 LNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELA 182

Query: 203 ERGIRVNGVAPGPIWTP-LIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              I+VN +APG I T    P    +  + +    +P  R G+P ++    VFLA +  S
Sbjct: 183 AYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLA-SRAS 241

Query: 262 SYITGQVL 269
            Y+ G +L
Sbjct: 242 DYVNGHIL 249

Length = 258

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  106 bits (267), Expect = 5e-26
 Identities = 80/270 (29%), Positives = 112/270 (41%), Gaps = 51/270 (18%)

Query: 36  PSNK-LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD-AQETLEILREAK 93
           P  K L GKVALVTG   GIG+A A   A EGA V           D  +E  E      
Sbjct: 415 PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVV--------LADLDEEAAEAAAAE- 465

Query: 94  TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER 153
                  + ++ D+  +   +   +E   A+G +DI+V+NA +   +G +EE  +E   R
Sbjct: 466 LGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI-AISGPIEETSDEDWRR 524

Query: 154 VFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------------ARG 196
            F  N   HF + R ++R M     G +I+   S   +   P                R 
Sbjct: 525 SFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQ 584

Query: 197 LALQLVERGIRVNGVAP------GPIWTPLIPSSFSEEESAQFGSEVP-----------M 239
           LAL+L   GIRVNGV P        IWT      + E  +A +G               +
Sbjct: 585 LALELGPDGIRVNGVNPDAVVRGSGIWTG----EWIEARAAAYGLSEEELEEFYRARNLL 640

Query: 240 KRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
           KR   P +VA   VFLA +   S  TG ++
Sbjct: 641 KREVTPEDVAEAVVFLA-SGLLSKTTGAII 669

Length = 681

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 9e-26
 Identities = 79/252 (31%), Positives = 113/252 (44%), Gaps = 34/252 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+ ALVTG   GIG A+A   A  GA V          +D  +       A     K 
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILN------GRDPAKL-----AAAAESLKG 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAY----GKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
               +  L FD      V   ++A+    G IDILVNNA +Q++   +E+   +  ER+ 
Sbjct: 57  QGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRT-PLEDFPADAFERLL 115

Query: 156 RTNIFSHFFMTRHSLRHMNEGSA--IINTTSVEPLWHSPE--------------ARGLAL 199
           RTNI S F++ +   RHM    A  IIN  SV+     P                +G+A 
Sbjct: 116 RTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMAT 175

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
              + G++ N +APG   TPL  +  ++ E SA      P  R G+  E+    VFLA +
Sbjct: 176 DWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASD 235

Query: 259 HCSSYITGQVLH 270
             SS++ G VL+
Sbjct: 236 -ASSFVNGHVLY 246

Length = 255

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  101 bits (253), Expect = 1e-25
 Identities = 73/263 (27%), Positives = 109/263 (41%), Gaps = 50/263 (19%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
              +L GK ALVTGG  GIG A        GA V  T         A+   + L E    
Sbjct: 3   FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTT---------ARSRPDDLPEGVE- 52

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNA-AVQYKAGSVEEIDEERLERV 154
                  ++ADL   E C  V   V+   G +DILV+        AG    + +E  +  
Sbjct: 53  ------FVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDE 106

Query: 155 FRTNIFSHFFMTRHSLRHMNE-GS-AIINTTSVEPLWHSPEA---------------RGL 197
              N+ +   + R  L  M   GS  II+ TS++     PE+               + L
Sbjct: 107 LNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSL 166

Query: 198 ALQLVERGIRVNGVAPGPIWTP--------LIPSSFSEEESAQ------FGSEVPMKRAG 243
           + ++  +G+RVN V+PG I T         L  ++ ++ E A+       G  +P+ R  
Sbjct: 167 SKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGG-IPLGRPA 225

Query: 244 QPIEVAPCYVFLACNHCSSYITG 266
           +P EVA    FLA +  ++ ITG
Sbjct: 226 EPEEVAELIAFLASDR-AASITG 247

Length = 260

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  100 bits (252), Expect = 1e-25
 Identities = 74/257 (28%), Positives = 106/257 (41%), Gaps = 40/257 (15%)

Query: 41  RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK-- 98
           +GKVALVTG  SGIG  +A   A  GA +              +  EI        AK  
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLN--------GFGDAAEIEAVRAGLAAKHG 52

Query: 99  -DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              +   ADL      + +V      +G +DILVNNA +Q+ A  +E+   E+ + +   
Sbjct: 53  VKVLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVA-PIEDFPTEKWDAIIAL 111

Query: 158 NIFSHFFMTRHSLRHMNEGS--AIINTTSVEPLWHSPEAR----------GL----ALQL 201
           N+ + F  TR +L HM +     IIN  SV  L  S              GL    AL+ 
Sbjct: 112 NLSAVFHTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALET 171

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQ---FGSEVPMKRAGQPIEVAP 250
              G+  N + PG + TPL+    S         +E A       + P K+   P ++  
Sbjct: 172 AGTGVTCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGD 231

Query: 251 CYVFLACNHCSSYITGQ 267
             VFL  +  +S ITG 
Sbjct: 232 TAVFL-ASDAASQITGT 247

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  100 bits (250), Expect = 3e-25
 Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 42/257 (16%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP- 100
            K+ L+TG    IG+A        GA +    +           LE L+E  T+  K+  
Sbjct: 2   DKIILITGAAGLIGKAFCKALLSAGARLILADIN-------APALEQLKEELTNLYKNRV 54

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK--AGSVEEIDEERLERVFRTN 158
           +A+  D+   E+ K +++  +  +G+IDIL+NNA    K      EE   E+   V   N
Sbjct: 55  IALELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVN 114

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSV------------EPLWHSPE----------- 193
           +   F  ++  ++        +IIN  S+                +SP            
Sbjct: 115 LGGAFLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIH 174

Query: 194 -ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
             + LA    + GIRVN ++PG I     PS F E    ++  + P+KR   P ++    
Sbjct: 175 LTKYLAKYYADTGIRVNAISPGGILNNQ-PSEFLE----KYTKKCPLKRMLNPEDLRGAI 229

Query: 253 VFLACNHCSSYITGQVL 269
           +FL  +  SSY+TGQ L
Sbjct: 230 IFL-LSDASSYVTGQNL 245

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 3e-25
 Identities = 82/257 (31%), Positives = 115/257 (44%), Gaps = 38/257 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L+ KV +VTGG SGIG A++   A EGA      +  +   D  E  E LR A    A+
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPV---IFGRSAPDD-EFAEELR-ALQPRAE 58

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG---SVEEIDEERLERVF 155
               +  DL  D  C+  V++ V  +G+ID LVNNA V    G     E      LER  
Sbjct: 59  ---FVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAF-VASLER-- 112

Query: 156 RTNIFSHFFMTRHSLRHMNEG-SAIINTTSVEPLW----HSPEA----------RGLALQ 200
             N+  ++ M  + L H+     AI+N +S   L      S  A          R  A+ 
Sbjct: 113 --NLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVA 170

Query: 201 LVERGIRVNGVAPGPIWTPLIP---SSFS--EEESAQFGSEVPM-KRAGQPIEVAPCYVF 254
           L + G+RVN V P  + TPL     ++F   E + A   +++P+  R     E+A   VF
Sbjct: 171 LAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVF 230

Query: 255 LACNHCSSYITGQVLHP 271
           L     SS+ TGQ L  
Sbjct: 231 LLSER-SSHTTGQWLFV 246

Length = 258

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 99.4 bits (248), Expect = 5e-25
 Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 27/248 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL--EILREAKTSD 96
           +   KVA+VTG   GIG+A A   A EGA+V    V +    +  E +  +I+ +  T+ 
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASV----VVADINAEGAERVAKQIVADGGTA- 57

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV--QYKAGSVEEIDEERLERV 154
               +A+  D+   ++ K + D  V+A+G ID LVNNAA+    K   +  +  +  ++ 
Sbjct: 58  ----IAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKF 113

Query: 155 FRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP-------EARGLALQLVE-- 203
              N+      TR   +HM +  G AI+N +S     +S           GL  QL    
Sbjct: 114 MSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLAKVGLNGLTQQLAREL 173

Query: 204 --RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
               IRVN +APGPI T    +   +E  A     +P+ R G P ++    +FL  +  +
Sbjct: 174 GGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFL-LSDEA 232

Query: 262 SYITGQVL 269
           S+ITGQ+ 
Sbjct: 233 SWITGQIF 240

Length = 250

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 99.7 bits (249), Expect = 6e-25
 Identities = 73/250 (29%), Positives = 109/250 (43%), Gaps = 41/250 (16%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTGG + IG AVA      GA VA        + DA      +  +    A  
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIV------DIDADNG-AAVAASLGERA-- 54

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE--RVFRT 157
              I+ D+  D   +R V  VV  +G++DILVN A      G    +   R +       
Sbjct: 55  -RFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDG----LASSRADWLAALDV 109

Query: 158 NIFSHFFMTRHSLRHM-NEGSAIINTTSVEP------LWHSPEA--------RGLALQLV 202
           N+ S   + + +  H+   G AI+N TS+         W  P +        R +A+ L 
Sbjct: 110 NLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLA 169

Query: 203 ERGIRVNGVAPGPIWTPLIPS------SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
             GIRVN V+PG  W+ ++        + ++  +A F     + R G P EVA    FL 
Sbjct: 170 PDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFH---LLGRVGDPEEVAQVVAFLC 226

Query: 257 CNHCSSYITG 266
            +  +S++TG
Sbjct: 227 SDA-ASFVTG 235

Length = 261

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  103 bits (257), Expect = 7e-25
 Identities = 74/252 (29%), Positives = 112/252 (44%), Gaps = 37/252 (14%)

Query: 41  RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP 100
           + +V LVTG   GIGRA    +A  G  V            A   +E  RE   S   D 
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVV----------ADRNVERARERADSLGPDH 53

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNI 159
            A++ D+  +   +   +++   +G+ID+LVNNA V      +  +   E   R+   N+
Sbjct: 54  HALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINL 113

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
              + + R +LR M E   G+AI+N  S   L   P+               R LA +  
Sbjct: 114 TGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWA 173

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG-----SEVPMKRAGQPIEVAPCYVFLAC 257
            +GIRVN V PG + T ++      E + +       S +P+ R G+P E+A    FLA 
Sbjct: 174 AKGIRVNAVLPGYVRTQMVA---ELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLAS 230

Query: 258 NHCSSYITGQVL 269
           +  +SYITG  L
Sbjct: 231 DQ-ASYITGSTL 241

Length = 520

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 99.2 bits (248), Expect = 7e-25
 Identities = 64/194 (32%), Positives = 91/194 (46%), Gaps = 29/194 (14%)

Query: 43  KVALVTGGDSGIGRAVA-HCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           KV L+TG  SGIG A+A    A +G  V  T           + LE L E    + +   
Sbjct: 1   KVVLITGCSSGIGLALALALAA-QGYRVIATARNP-------DKLESLGELLNDNLE--- 49

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+  +E+ K  V EV+  +G+ID+LVNNA      G +EE   E +  +F  N+F 
Sbjct: 50  VLELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGL-FGPLEETSIEEVRELFEVNVFG 108

Query: 162 HFFMTRHSLRHM-NEGSA-IINTTSV---EPL-WHSP--------EA--RGLALQLVERG 205
              +TR  L  M  +GS  I+N +SV    P  +  P        EA    L L+L   G
Sbjct: 109 PLRVTRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFG 168

Query: 206 IRVNGVAPGPIWTP 219
           I+V  + PGP+ T 
Sbjct: 169 IKVTIIEPGPVRTG 182

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 99.1 bits (247), Expect = 8e-25
 Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 38/253 (15%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            KV +VTGG  GIGR +   +   GA V F        + A + LE   E   +      
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFC----ARGEAAGQALE--SELNRAGPGSCK 62

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+  +E+ K ++   V  +G+ID LVNNA       + +E   +    +   N+ S
Sbjct: 63  FVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLIS 122

Query: 162 HFFMTRHSLRHMNEGSA-IINTTSVEPLWHSPEA--------------RGLALQLVERGI 206
           +F  ++++L H+ +    IIN +S+       +A              + LA+     G+
Sbjct: 123 YFLASKYALPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGV 182

Query: 207 RVNGVAPGPIWTPL----------IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           RVN ++PG IWTPL            ++  E E AQ      + R G   E     +FLA
Sbjct: 183 RVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQ-----LLGRMGTEAESGLAALFLA 237

Query: 257 CNHCSSYITGQVL 269
               +++ TG  L
Sbjct: 238 AE--ATFCTGIDL 248

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 98.6 bits (246), Expect = 1e-24
 Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 29/213 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQE------TLEILREAK 93
           L GKVA VTG   GIGRA+A   A  GATV     K+  E D         T+E   E  
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVA-AKTASEGDNGSAKSLPGTIEETAEEI 59

Query: 94  TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER 153
            +     + I  D+  ++  + +V+  V+ +G++DILVNNA   + +  VE+   +R + 
Sbjct: 60  EAAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLS-LVEDTPAKRFDL 118

Query: 154 VFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPL----WHSPEA----------RGL 197
           + R N+   + +++ +L HM       I+N +    L         A           GL
Sbjct: 119 MQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGL 178

Query: 198 ALQLVERGIRVNGVAPG-----PIWTPLIPSSF 225
           A +L   GI VN + P      P  T L   S 
Sbjct: 179 AAELRRHGIAVNSLWPSTAIETPAATELSGGSD 211

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 98.9 bits (247), Expect = 1e-24
 Identities = 61/231 (26%), Positives = 92/231 (39%), Gaps = 34/231 (14%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE--EKDAQE-TLEILREAKT 94
             ++GK AL+TG  SGIG  +A   A  G  +     + ++  E  A+E   +   E + 
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLILV-ARREDKLEALAKELEDKTGVEVEV 60

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
                   I ADL   E  +R+ DE+    G ID+LVNNA      G   E+  +  E +
Sbjct: 61  --------IPADLSDPEALERLEDELKERGGPIDVLVNNAGFGT-FGPFLELSLDEEEEM 111

Query: 155 FRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLA 198
            + NI +   +T+  L  M       IIN  S   L  +P                  L 
Sbjct: 112 IQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALR 171

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
            +L   G++V  V PGP  T      F + + +      P +    P +VA
Sbjct: 172 EELKGTGVKVTAVCPGPTRTE-----FFDAKGSDVYLLSPGELVLSPEDVA 217

Length = 265

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 97.8 bits (244), Expect = 3e-24
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 37/260 (14%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTS 95
             +L GKVALVTGG  G+G A+A  +A  GA  +     ++ E+ +AQ       E +  
Sbjct: 1   MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICG-RNAEKGEAQA-----AELEAL 54

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
            A   + + ADL   E+C+RVV     A+G++D LVN A +  + G++ +   E  +R F
Sbjct: 55  GA-KAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDR-GTILDTSPELFDRHF 112

Query: 156 RTNIFSHFFMTRHSLRHM----NEGSAIINTTSVEPLWHSPE------ARGLALQLVERG 205
             N+ + FF+ + +++ M     EG+ I+N  S+      P       ++G AL  + R 
Sbjct: 113 AVNVRAPFFLMQEAIKLMRRRKAEGT-IVNIGSMSAHGGQPFLAAYCASKG-ALATLTRN 170

Query: 206 ---------IRVNGVAPGPIWTP---LIPSSF---SEEESAQFGSEVPMKRAGQPIEVAP 250
                    IRVNG+  G + T     I   F    ++   +  +  P  R   P EVA 
Sbjct: 171 AAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVAR 230

Query: 251 CYVFLACNHCSSYITGQVLH 270
              FL  +  S  +TG V+ 
Sbjct: 231 AVAFLLSDE-SGLMTGSVID 249

Length = 260

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 96.7 bits (241), Expect = 8e-24
 Identities = 66/258 (25%), Positives = 103/258 (39%), Gaps = 41/258 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L GK  L+TG   GIG A A  +A EG  +          +DA     +  + + +   
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLV------ARDADALEALAADLRAAHGV 57

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           D    + DL   E      +++    G IDILVNNA      G ++++D+      +   
Sbjct: 58  DVAVHALDLSSPEA----REQLAAEAGDIDILVNNAG-AIPGGGLDDVDDAAWRAGWELK 112

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA----------------RGLALQ 200
           +F +  +TR +   M       I+N         +P+A                R L  +
Sbjct: 113 VFGYIDLTRLAYPRMKARGSGVIVNVIGAAG--ENPDADYICGSAGNAALMAFTRALGGK 170

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE---------VPMKRAGQPIEVAPC 251
            ++ G+RV GV PGP+ T  + +       A+ G E         +P+ R   P EVA  
Sbjct: 171 SLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADL 230

Query: 252 YVFLACNHCSSYITGQVL 269
             FLA    S Y +G V+
Sbjct: 231 VAFLASPR-SGYTSGTVV 247

Length = 259

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 94.2 bits (235), Expect = 8e-24
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 7/150 (4%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
              L+TGG  G+G A+A   A EGA       +      A E +  L             
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAE----VTV 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
            + D+   +    ++  +  A G +D +V+NA V    G +EE+  ER ERV    +   
Sbjct: 57  AACDVADRDALAALLAALPAALGPLDGVVHNAGVL-DDGPLEELTPERFERVLAPKVTGA 115

Query: 163 FFMTRHSLRHMNEGSAIINTTSVEPLWHSP 192
           + +   +     +  A +  +SV  +  SP
Sbjct: 116 WNLHELTRDL--DLGAFVLFSSVAGVLGSP 143

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 95.2 bits (237), Expect = 2e-23
 Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 34/258 (13%)

Query: 38  NKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEK-----DAQETLEILR 90
           N+L+ KVA+VTG     GIG A+    A  GA + FTY  + +++     D  E +++  
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 91  EAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
           E   +  K   ++  DL  ++  K ++++V    G   ILVNNAA          +  E 
Sbjct: 62  ELLKNGVK-VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNND-FSNLTAEE 119

Query: 151 LERVFRTNIFSHFFMTRHSLRHMN--EGSAIINTTSVEPLWHSPEA-------------- 194
           L++ +  N+ +   ++    R  +   G  IIN TS +     P                
Sbjct: 120 LDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ--GPMVGELAYAATKGAIDA 177

Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
               LA ++   GI VN + PGP  T  +     +     F    P  R G+P + A   
Sbjct: 178 LTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMF----PFGRIGEPKDAARLI 233

Query: 253 VFLACNHCSSYITGQVLH 270
            FLA    + +ITGQ++H
Sbjct: 234 KFLASEE-AEWITGQIIH 250

Length = 256

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 95.1 bits (236), Expect = 2e-23
 Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 29/251 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVALVTG   GIGRA+A   A +GA VA  Y   +E  +A+ET+  ++    S+   
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE--EAEETVYEIQ----SNGGS 55

Query: 100 PMAISADL----GFDENCKRVVDEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLER 153
             +I A+L    G +     + +E+ N  G  K DIL+NNA +   A  +EE  E+  +R
Sbjct: 56  AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA-FIEETTEQFFDR 114

Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------ARG--------LAL 199
           +   N  + FF+ + +L  + + S IIN +S       P+       +G        LA 
Sbjct: 115 MVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAK 174

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVFLACN 258
           QL  RGI VN + PG I T +     S+    Q+ + +    R G+  ++A    FLA  
Sbjct: 175 QLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASP 234

Query: 259 HCSSYITGQVL 269
             S ++TGQ++
Sbjct: 235 D-SRWVTGQLI 244

Length = 252

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 94.8 bits (236), Expect = 3e-23
 Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 30/250 (12%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           VA+VTG   GIGRA+A   A  G  +A       +++  +   E+L   + +        
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIA-INDLPDDDQATEVVAEVLAAGRRAIYFQ---- 57

Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA-GSVEEIDEERLERVFRTNIFSH 162
            AD+G   + + ++D+    +G++D LVNNA +  +  G + ++ E+  +R+   N+   
Sbjct: 58  -ADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGP 116

Query: 163 FFMTRHSLRHMNEG--------SAIINTTSVEPLWHSPE--------------ARGLALQ 200
           FF+T+   R M E          +II  TS+     SP                R LA +
Sbjct: 117 FFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYR 176

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L + GI V+ + PG I T +      + +       VP++R GQP ++A     LA    
Sbjct: 177 LADEGIAVHEIRPGLIHTDMTAPVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLASGLL 236

Query: 261 SSYITGQVLH 270
             Y TGQ ++
Sbjct: 237 -PYSTGQPIN 245

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 94.7 bits (236), Expect = 4e-23
 Identities = 69/254 (27%), Positives = 105/254 (41%), Gaps = 35/254 (13%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            +VA+V GG   +G  + H  A EG  VA        EK A    EI  E     A    
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAV--ADINSEKAANVAQEINAEYGEGMA---Y 56

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
              AD   +++   +   V   +G++D+LV NA +  KA  + +      +R  + N+  
Sbjct: 57  GFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIA-KAAFITDFQLGDFDRSLQVNLVG 115

Query: 162 HFFMTRHSLRHM----NEGSAI-INTTS--VEPLWHSPEA----------RGLALQLVER 204
           +F   R   R M     +G  I IN+ S  V    +S  +          + LAL L E 
Sbjct: 116 YFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEY 175

Query: 205 GIRVNGVAPG-----PIWTPLIPS-----SFSEEESAQ-FGSEVPMKRAGQPIEVAPCYV 253
           GI V+ +  G     P++  L+P          +E  Q +  +VP+KR     +V    +
Sbjct: 176 GITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLL 235

Query: 254 FLACNHCSSYITGQ 267
           F A    +SY TGQ
Sbjct: 236 FYASPK-ASYCTGQ 248

Length = 259

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 93.9 bits (234), Expect = 5e-23
 Identities = 62/194 (31%), Positives = 80/194 (41%), Gaps = 20/194 (10%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GK  L+TGG SGIG+A+A     EGA V    V   E K  +   EI  EA  S  K   
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANV--IIVARSESKLEEAVEEIEAEANASGQK-VS 57

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            ISADL   E  ++   + V   G  D++VN A +    G  E++  E  ER    N F 
Sbjct: 58  YISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISI-PGLFEDLTAEEFERGMDVNYFG 116

Query: 162 HFFMTRHSLRHM--NEGSAIINTTSVEPLW----HSPEA------RGLA----LQLVERG 205
              +    L  M       I+  +S   L     +S         RGLA     +L    
Sbjct: 117 SLNVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYN 176

Query: 206 IRVNGVAPGPIWTP 219
           IRV+ V P    TP
Sbjct: 177 IRVSVVYPPDTDTP 190

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 94.1 bits (234), Expect = 6e-23
 Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 26/246 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L G+VA VTG  SGIG+ +A   A  GA VA      + +    ET E +  A     +
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVAL--FDLRTDDGLAETAEHIEAA----GR 58

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + I+AD+    + +  V       G + + VN A +   A   EE++EE+ + V   N
Sbjct: 59  RAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIA-NANPAEEMEEEQWQTVMDIN 117

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPL----------WHSPEA------RGLALQ 200
           +   F   +   R M  N G +I+N  S+  +          +++ +A      + LA++
Sbjct: 118 LTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAME 177

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
            V RGIRVN ++PG   TP+        ++  F  + PM+R  +  E+    VFL  +  
Sbjct: 178 WVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSD-A 236

Query: 261 SSYITG 266
           +S+ TG
Sbjct: 237 ASFCTG 242

Length = 254

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 93.6 bits (233), Expect = 7e-23
 Identities = 67/246 (27%), Positives = 103/246 (41%), Gaps = 36/246 (14%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GK  LVTG  SGIGRA A   A  GA V          ++A   L+ L      +     
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAA------ARNAAA-LDRLAGETGCE----- 56

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+G D      +   + A G  D LVN A +     +++   E   +RV   N   
Sbjct: 57  PLRLDVGDDA----AIRAALAAAGAFDGLVNCAGIASLESALDMTAEG-FDRVMAVNARG 111

Query: 162 HFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVER 204
              + RH  R M     G +I+N +S   L   P+               R L ++L   
Sbjct: 112 AALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPH 171

Query: 205 GIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           GIRVN V P    TP+   ++S+ ++S    + +P+ R  +  +VA   +FL  +  +S 
Sbjct: 172 GIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA-ASM 230

Query: 264 ITGQVL 269
           ++G  L
Sbjct: 231 VSGVSL 236

Length = 245

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 92.6 bits (230), Expect = 3e-22
 Identities = 83/262 (31%), Positives = 118/262 (45%), Gaps = 49/262 (18%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA------KTSD 96
           +VALVTG  SGIG A+A     EG  V   +V ++ E+    T++ LREA      +T D
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRV---FVCARGEEGLATTVKELREAGVEADGRTCD 60

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +    I A          +V   V  YG ID+LVNNA  +   G+  E+ +E    V  
Sbjct: 61  VRSVPEIEA----------LVAAAVARYGPIDVLVNNAG-RSGGGATAELADELWLDVVE 109

Query: 157 TNIFSHFFMTRHSLRH--MNE-GSA-IINTTS-------VEPLWHSPEARG-------LA 198
           TN+   F +T+  L+   M E G+  IIN  S       V    +S    G       L 
Sbjct: 110 TNLTGVFRVTKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALG 169

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPS---------SFSEEES-AQFGSEVPMKRAGQPIEV 248
           L+L   GI VN V PG + TP+  S           S EE+  +  + VP+ R   P EV
Sbjct: 170 LELARTGITVNAVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEV 229

Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    +L  +  ++ +T Q L+
Sbjct: 230 AGMVAYLIGDGAAA-VTAQALN 250

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 91.9 bits (229), Expect = 4e-22
 Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 25/227 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKV ++TG  SGIG  +A+  A  GA +  +       +  +   E+  E     A  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLS------ARREERLEEVKSECLELGAPS 54

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
           P  +  D+   E+ ++VV+E +  +G +DIL+NNA +  +     +   +   ++   N 
Sbjct: 55  PHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGISMR-SLFHDTSIDVDRKIMEVNY 113

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVE-----PLWHSPEARGLALQ---------LV 202
           F    +T+ +L H+   ++GS I+  +S+      P   +  A   ALQ         L 
Sbjct: 114 FGPVALTKAALPHLIERSQGS-IVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELS 172

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
           E  I V  V PG I T +  ++ S + S     +        P E A
Sbjct: 173 EPNISVTVVCPGLIDTNIAMNALSGDGSMSAKMDDTTANGMSPEECA 219

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 91.5 bits (228), Expect = 4e-22
 Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 30/200 (15%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKT 94
              L+GKVAL+TG  SGIG A A   A  GA V            A  +E LE L +   
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLA---------ARREERLEALADEIG 51

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
           + A   +A+  D+      +  ++ +   +G+IDILVNNA +      ++E D +  +R+
Sbjct: 52  AGAALALAL--DVTDRAAVEAAIEALPEEFGRIDILVNNAGL-ALGDPLDEADLDDWDRM 108

Query: 155 FRTNIFSHFFMTRHSLRHMNE--GSAIINTTSV--------EPLWHSPEA------RGLA 198
             TN+      TR  L  M E     IIN  S+          ++ + +A       GL 
Sbjct: 109 IDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLR 168

Query: 199 LQLVERGIRVNGVAPGPIWT 218
            +L   GIRV  ++PG + T
Sbjct: 169 QELAGTGIRVTVISPGLVET 188

Length = 246

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 91.6 bits (227), Expect = 5e-22
 Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 30/246 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK AL+TG  +GIG+ VA  Y   GA VA             + LE L +   +    
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL-------DALEKLADEIGTSGGK 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + +  D+   +    ++D+V    G IDI V NA +      + ++  E  +R+  TN+
Sbjct: 60  VVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGI-ITVTPMLDMPLEEFQRLQNTNV 118

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEP-LWHSPE---------------ARGLALQ 200
              F   + + + M    +G  IINT S+   + + P+                + +A++
Sbjct: 119 TGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVE 178

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L    IRVN V+PG I T L+      E    +  ++P+ R G+P E+A  Y++LA +  
Sbjct: 179 LAPHKIRVNSVSPGYILTELVEP--YTEYQPLWEPKIPLGRLGRPEELAGLYLYLA-SEA 235

Query: 261 SSYITG 266
           SSY+TG
Sbjct: 236 SSYMTG 241

Length = 253

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 91.0 bits (226), Expect = 5e-22
 Identities = 67/249 (26%), Positives = 105/249 (42%), Gaps = 38/249 (15%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           + L+GKV  +TGG  G+GRA A   A  GA VA      +      +TL           
Sbjct: 3   HSLQGKVVAITGGFGGLGRATAAWLAARGARVALI---GRGAAPLSQTL-------PGVP 52

Query: 98  KDPMAISA-DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            D + I   DL   +  +R VDEV   +G++D LVN A   +  G++ + D +  +R++ 
Sbjct: 53  ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGA-FVWGTIADGDADTWDRMYG 111

Query: 157 TNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQ 200
            N+ +    ++ +L  +    G  I+N  +   L   P                  LA +
Sbjct: 112 VNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAE 171

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L++RGI VN V P  I TP      ++   A F   V       P ++A    FL  +  
Sbjct: 172 LLDRGITVNAVLPSIIDTPPNR---ADMPDADFSRWV------TPEQIAAVIAFLLSDE- 221

Query: 261 SSYITGQVL 269
           +  ITG  +
Sbjct: 222 AQAITGASI 230

Length = 239

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 91.2 bits (227), Expect = 9e-22
 Identities = 67/267 (25%), Positives = 101/267 (37%), Gaps = 55/267 (20%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GK+ +VTGG SGIG A+       GA V    +   + +                   
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQF------------- 53

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ--------YKAGSVEEIDEERL 151
              +  D+   E     V E++  +G+ID LVNNA +                E++E   
Sbjct: 54  ---VPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAF 110

Query: 152 ERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------R 195
           +++F  N    F M++   R M       I+N +S   L  S                 R
Sbjct: 111 DKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTR 170

Query: 196 GLALQLVERGIRVNGVAPGPI-WTPLIPSSFSEE-------------ESAQFGSEVPMKR 241
             A +L +  IRV GVAPG +  T L    + E                    S +P+ R
Sbjct: 171 SWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGR 230

Query: 242 AGQPIEVAPCYVFLACNHCSSYITGQV 268
           +G+  EVA    +L  +  +SYITG  
Sbjct: 231 SGKLSEVADLVCYLLSDR-ASYITGVT 256

Length = 266

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 90.6 bits (225), Expect = 1e-21
 Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 31/248 (12%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           +V LVTG   G+G A+A  +A EGA V   Y +S E  +A               +  +A
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEA---------VAAEAGERAIA 51

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK-----AGSVEEIDEERLERVFRT 157
           I AD+   +  + +++E  N +G +D +VNNA + +        + + ID E  ++    
Sbjct: 52  IQADVRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEG 111

Query: 158 NIFSHFFMTRHSLRHMNEGSA--IINTTS--VE---PLWHSPEA---------RGLALQL 201
            +     + +  L    E  +  +IN  +   +     +H             R +A +L
Sbjct: 112 AVKGALNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKEL 171

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              GI VN V+ G +      ++  +E         P+ +   P ++A   +F A    +
Sbjct: 172 GPYGITVNMVSGGLLKVTDASAATPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASPW-A 230

Query: 262 SYITGQVL 269
             +TGQ L
Sbjct: 231 RAVTGQNL 238

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 90.1 bits (224), Expect = 2e-21
 Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 26/189 (13%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKVALVTGG SGIG A+A   A EGA V    +  +  +   E  +    A        +
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRA--------L 52

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+  +   +   ++ V  +G +DI+V+NA +   +  + E   E   R    N+  
Sbjct: 53  GVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGI-ATSSPIAETSLEDWNRSMDINLTG 111

Query: 162 HFFMTRHS---LRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVER 204
           HF ++R +   ++    G  I+   S   +   P               AR LAL+  E 
Sbjct: 112 HFLVSREAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGED 171

Query: 205 GIRVNGVAP 213
           GIRVN V P
Sbjct: 172 GIRVNTVNP 180

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 89.6 bits (223), Expect = 2e-21
 Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 29/241 (12%)

Query: 49  GGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLG 108
             D+ I  A+A   A EGA V  T         A + L     AK   A     I  D+ 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDEL-----AKELPAD---VIPLDVT 54

Query: 109 FDENCKRVVDEVVNAYGKIDILVN---NAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
            DE+   + ++V    GKID LV+    +    K     +   E   +    + +S   +
Sbjct: 55  SDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISL 114

Query: 166 TRHSLRHMNEGSAIINTTSV--EPLWHSPE------------ARGLALQLVERGIRVNGV 211
            + +   MNEG +I+  + +  E ++                AR LA +L  +GIRVN +
Sbjct: 115 AKAAKPLMNEGGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTI 174

Query: 212 APGPIWTPLIPSSFSEEESAQFGSE--VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
           + GP  T    S     +     +E   P+ R     EVA    FL  +  +  ITGQ+L
Sbjct: 175 SAGPTKT-TAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFL-LSDLARGITGQIL 232

Query: 270 H 270
           +
Sbjct: 233 Y 233

Length = 239

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 89.6 bits (223), Expect = 3e-21
 Identities = 65/249 (26%), Positives = 97/249 (38%), Gaps = 40/249 (16%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQ-ETLEILREAKTSDAKDPMAI 103
            LVTG   GIG AVA   A  GA VA          D   E L  L              
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAV--------DRNFEQLLELVADLRRYGYPFATY 52

Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
             D+        VV  +   YG ID+LVN A +  + G+++ + +E  +  F  N F  F
Sbjct: 53  KLDVADSAAVDEVVQRLEREYGPIDVLVNVAGI-LRLGAIDSLSDEDWQATFAVNTFGVF 111

Query: 164 FMTRHSLRHM--NEGSAIINTTSVEPLWHSPE----------------ARGLALQLVERG 205
            +++     M      AI+   S     + P                  + L L+L   G
Sbjct: 112 NVSQAVSPRMKRRRSGAIVTVGSNAA--NVPRMGMAAYAASKAALTMLTKCLGLELAPYG 169

Query: 206 IRVNGVAPGPIWTP----LIPSSFSEEE-----SAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           IR N V+PG   T     L    + E++       QF   +P+ +  +P ++A   +FLA
Sbjct: 170 IRCNVVSPGSTDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLA 229

Query: 257 CNHCSSYIT 265
            +  +S+IT
Sbjct: 230 SDL-ASHIT 237

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 88.4 bits (220), Expect = 4e-21
 Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 22/221 (9%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           KVALVTG + GIG  +    A  G  TV    + +++ +  Q  +E LR           
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTV---ILTARDVERGQAAVEKLRAEG----LSVR 53

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
               D+  D + +   D V   YG +DILVNNA + +K         E+     +TN F 
Sbjct: 54  FHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFG 113

Query: 162 HFFMTRHSLRHMNEGSA--IINTTSVE----PLWHSPEA------RGLALQLVERGIRVN 209
              +T+  L  + +  A  I+N +S        +   +A      R LA +L E GI+VN
Sbjct: 114 TVDVTQALLPLLKKSPAGRIVNVSSGLGSLTSAYGVSKAALNALTRILAKELKETGIKVN 173

Query: 210 GVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAP 250
              PG + T +        ++ + G+E P+  A  P +  P
Sbjct: 174 ACCPGWVKTDM--GGGKAPKTPEEGAETPVYLALLPPDGEP 212

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 89.6 bits (223), Expect = 4e-21
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 43/266 (16%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVA++TGG   +G A+A   A  GA VA   +  + ++ A+  +  ++ A      +
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVA---ILDRNQEKAEAVVAEIKAA----GGE 60

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNA------AVQYKAGSVE--------E 145
            +A+ AD+   E+ ++   +++  +G  DIL+N A      A                 +
Sbjct: 61  ALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFD 120

Query: 146 IDEERLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVE---PLWHSPEARG---- 196
           +DEE  E VF  N+      T+   + M   +G  IIN +S+    PL   P        
Sbjct: 121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAA 180

Query: 197 -------LALQLVERGIRVNGVAPGPIWTP-----LIPSSFS-EEESAQFGSEVPMKRAG 243
                  LA+   + GIRVN +APG   T      L     S  E + +  +  PM R G
Sbjct: 181 ISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFG 240

Query: 244 QPIEVAPCYVFLACNHCSSYITGQVL 269
           +P E+    ++LA    SS++TG VL
Sbjct: 241 KPEELLGTLLWLADEKASSFVTGVVL 266

Length = 278

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 88.8 bits (221), Expect = 6e-21
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 47/255 (18%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
             GK   VTG   GIG AVA  +   GA V         ++D      +L      D  D
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVL------DVSD 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A++           V   ++   G +D+LVN A +  + G+ + + +E  ++ F  N 
Sbjct: 60  AAAVAQ----------VCQRLLAETGPLDVLVNAAGI-LRMGATDSLSDEDWQQTFAVNA 108

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----------------ARGLALQL 201
              F + R  +         AI+   S     H P                 A+ + L+L
Sbjct: 109 GGAFNLFRAVMPQFRRQRSGAIVTVGSNAA--HVPRIGMAAYGASKAALTSLAKCVGLEL 166

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESA---------QFGSEVPMKRAGQPIEVAPCY 252
              G+R N V+PG   T +  + + +E+           QF   +P+ +  +P E+A   
Sbjct: 167 APYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAV 226

Query: 253 VFLACNHCSSYITGQ 267
           +FLA +  +S+IT Q
Sbjct: 227 LFLASDL-ASHITLQ 240

Length = 252

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 88.4 bits (219), Expect = 6e-21
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 36/245 (14%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKVA+VTGG  GIG+ +   +   G  V F  +   +E+   +  E           D  
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADI---DEERGADFAEAEGPNLFFVHGD-- 55

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
              AD       K VV  ++   G+ID+LVNNAA   K G +  +  E  +R+   N+  
Sbjct: 56  --VADET---LVKFVVYAMLEKLGRIDVLVNNAARGSK-GILSSLLLEEWDRILSVNLTG 109

Query: 162 HFFMTRHSLRHM-NEGSAIINTTSVEPLWHSPE------ARG--------LALQLVERGI 206
            + ++R+    +      IIN  S       P+      ++G        LA+ L    I
Sbjct: 110 PYELSRYCRDELIKNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSL-GPDI 168

Query: 207 RVNGVAPGPI----WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           RVN ++PG I          +  ++E+ AQ     P  R G P ++A   +FL C   + 
Sbjct: 169 RVNCISPGWINTTEQQEFTAAPLTQEDHAQ----HPAGRVGTPKDIANLVLFL-CQQDAG 223

Query: 263 YITGQ 267
           +ITG+
Sbjct: 224 FITGE 228

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 88.8 bits (220), Expect = 6e-21
 Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 33/247 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           L GKVA+VTG D+G+G+ +A   A  G   V    V      +  ET+E +    T+  +
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV------EPTETIEQV----TALGR 57

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             ++++ADL   +    +++  V  +G IDILVNNA +  +  ++ E  E+  + V   N
Sbjct: 58  RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAI-EFSEKDWDDVMNLN 116

Query: 159 IFSHFFMTRHSLRHM---NEGSAIINTTSV--------EPLWHSPEA------RGLALQL 201
           I S FFM++ + +H      G  IIN  S+         P + + ++      R +A + 
Sbjct: 117 IKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEW 176

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVA-PCYVFLACNH 259
            +  I VN +APG + T       ++E+ SA+    +P  R G P ++  P  VFLA + 
Sbjct: 177 AKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPV-VFLA-SS 234

Query: 260 CSSYITG 266
            S YI G
Sbjct: 235 ASDYING 241

Length = 253

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 88.6 bits (220), Expect = 7e-21
 Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 31/256 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            L+GKV L+ GG   +G  +A   A +GA  VA  Y  +  + DA+ET+  ++ A     
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA--- 61

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              +A  ADL      +++ D+   A+G+ DI +N      K   + EI E   + +F  
Sbjct: 62  -KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKK-PIVEISEAEYDEMFAV 119

Query: 158 NIFSHFFMTRHSLRHMNEGSAIIN-TTSV---------------EPLWHSPEARGLALQL 201
           N  S FF  + + RH+N+   I+   TS+                P+ H    R  + + 
Sbjct: 120 NSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAPVEHF--TRAASKEF 177

Query: 202 VERGIRVNGVAPGPIWTPLI-----PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
             RGI V  V PGP+ TP         + +  ++A   S           ++ P   FL 
Sbjct: 178 GARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLV 237

Query: 257 CNHCSSYITGQVLHPN 272
            +    +ITGQ +  N
Sbjct: 238 TD--GWWITGQTILIN 251

Length = 257

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 88.4 bits (219), Expect = 8e-21
 Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 42/265 (15%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVA-----------FTYVKSQEEKDAQETLEI 88
           L GKVA +TG   G GRA A   A EGA +             TY  +  E D  ET  +
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATRE-DLDETARL 59

Query: 89  LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
           +        +  +A  AD+      + VV++ V  +G++D++V NA V    G   E+ E
Sbjct: 60  VEAL----GRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGV-LSYGRSWELSE 114

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE------------ 193
           E+ + V   N+   +   +  + HM E   G +II T+SV  L   P             
Sbjct: 115 EQWDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLV 174

Query: 194 --ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-------SEEESAQFGSEVPMKRAGQ 244
              + LA +L E GIRVN + P  + TP+I             E +  F   +P+     
Sbjct: 175 GLTKTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVP 234

Query: 245 PIEVAPCYVFLACNHCSSYITGQVL 269
           P +VA   ++LA +  S YITG  L
Sbjct: 235 PEDVADAVLWLASDE-SRYITGHQL 258

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 90.7 bits (225), Expect = 1e-20
 Identities = 66/264 (25%), Positives = 103/264 (39%), Gaps = 37/264 (14%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
               L  +VA VTGG  GIGR  A   A EGA V    +     + A+     +     +
Sbjct: 408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVV---LADLNLEAAEAVAAEINGQFGA 464

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
                +A+  D+  ++  K    +V  AYG +DI+VNNA +   +   E   +E  +   
Sbjct: 465 GRA--VALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQE-WQLNL 521

Query: 156 RTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA--------------RGLA 198
                 +F + R + R M E   G  I+   S   ++    A              R LA
Sbjct: 522 DILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLA 581

Query: 199 LQLVERGIRVNGVAPGPIW--TPLIPSSFSEEESAQFGSEVP-----------MKRAGQP 245
            +    GIRVN V P  +   + +    + EE +A +G               +KR   P
Sbjct: 582 AEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFP 641

Query: 246 IEVAPCYVFLACNHCSSYITGQVL 269
            ++A    FLA +  S   TG ++
Sbjct: 642 ADIAEAVFFLASSK-SEKTTGCII 664

Length = 676

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 87.7 bits (217), Expect = 1e-20
 Identities = 74/251 (29%), Positives = 116/251 (46%), Gaps = 33/251 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+ ALVTG   GIG  +A     +GA V      ++ EK          EA  ++  +
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLH--GTRVEK---------LEALAAELGE 52

Query: 100 PMAI-SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
            + I  A+L   +  K +  +       +DILVNNA +  K G    + +E  + V   N
Sbjct: 53  RVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGIT-KDGLFVRMSDEDWDSVLEVN 111

Query: 159 IFSHFFMTR---HSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQL 201
           + + F +TR   H +     G  IIN TSV  +  +P               ++ LA ++
Sbjct: 112 LTATFRLTRELTHPMMRRRYGR-IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEI 170

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             R + VN VAPG I + +      +++ A  G+ +PMKR G   EVA    +LA +  +
Sbjct: 171 ATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGA-IPMKRMGTGAEVASAVAYLASSE-A 228

Query: 262 SYITGQVLHPN 272
           +Y+TGQ +H N
Sbjct: 229 AYVTGQTIHVN 239

Length = 245

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 43/258 (16%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  L+ G   +  I   +A   A +GA +AFTY   + EK  +E  E L        
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEEL-------- 55

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVN---NAAVQYKAGSVEEIDEERLERV 154
              + +  D+  DE+   +   +   +GK+D LV+    A  +   G   +   E     
Sbjct: 56  GSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIA 115

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--RGLALQ 200
              + +S   + + +   MN G +I+  T   S   + +         + EA  R LA  
Sbjct: 116 MDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAAD 175

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQFGSEVPMKRAGQPIEVAPCY 252
           L + GIRVN ++ GPI T L  S   +        E +A      P++R     EV    
Sbjct: 176 LGKEGIRVNAISAGPIRT-LAASGIGDFRKMLKENEANA------PLRRNVTIEEVGNTA 228

Query: 253 VFLACNHCSSYITGQVLH 270
            FL  +  SS ITG++++
Sbjct: 229 AFL-LSDLSSGITGEIIY 245

Length = 259

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 87.6 bits (217), Expect = 2e-20
 Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 38/259 (14%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
           PS +L GKVALVTGG +GIG ++   +   GA V    ++    ++  ++L         
Sbjct: 12  PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-------- 63

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERV 154
              +      D+  +++  R VD  V+ +G +DI+VNNA +       +  ++    E+V
Sbjct: 64  GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKV 123

Query: 155 FRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLW-----HSPEA---------RGL 197
           F  N+   F   +H+ R M    +GS I++  SV         H+            R +
Sbjct: 124 FDVNVKGVFLGMKHAARIMIPLKKGS-IVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSV 182

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ---------FGSEVPMKRAG-QPIE 247
           A +L + GIRVN V+P  + T L  +   E+E  +          G    +K       +
Sbjct: 183 AAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDD 242

Query: 248 VAPCYVFLACNHCSSYITG 266
           VA   +FLA +  + YI+G
Sbjct: 243 VANAVLFLASDE-ARYISG 260

Length = 280

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 85.4 bits (212), Expect = 6e-20
 Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 28/208 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVAL+TGG  GIG A+A     EG  VA T   ++++K+ +E    L          
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAIT---ARDQKELEEAAAELNNKGNV---- 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + ++AD+  + + +R VD +V A+G +D+L+ NA V      VEE+  E    V  TN+
Sbjct: 57  -LGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVG-HFAPVEELTPEEWRLVIDTNL 114

Query: 160 FSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPEARGLA----------------LQLV 202
              F+  + ++  +   G  IIN +S+     +  A G A                L L 
Sbjct: 115 TGAFYTIKAAVPALKRGGGYIINISSLAG--TNFFAGGAAYNASKFGLVGFSEAAMLDLR 172

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEES 230
           + GI+V+ + PG + T     + SE+++
Sbjct: 173 QYGIKVSTIMPGSVATHFNGHTPSEKDA 200

Length = 237

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 85.7 bits (213), Expect = 6e-20
 Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 32/251 (12%)

Query: 42  GKVALVTG--GDSGIGRAVA-HCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           GK  L+TG   D  I   +A   +   GA +AFTY      K  ++  E L E+      
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHE-AGAELAFTYQPEALRKRVEKLAERLGESA----- 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVN---NAAVQYKAGSVEEIDEERLERVF 155
             + +  D+  DE  K +  EV   +GK+D LV+    A      G   +   +   +  
Sbjct: 55  --LVLPCDVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKAL 112

Query: 156 RTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--RGLALQL 201
             + +S   + + +L  MN G +I+  +   S   +           + E+  R LA +L
Sbjct: 113 DISAYSLVSLAKAALPIMNPGGSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYEL 172

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE--VPMKRAGQPIEVAPCYVFLACNH 259
             +GIRVN ++ GPI T L  S  +  +     SE   P+ R     EV     FL  + 
Sbjct: 173 GRKGIRVNAISAGPIKT-LAASGITGFDKMLEYSEQRAPLGRNVTAEEVGNTAAFL-LSD 230

Query: 260 CSSYITGQVLH 270
            SS ITG++++
Sbjct: 231 LSSGITGEIIY 241

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 85.8 bits (213), Expect = 7e-20
 Identities = 67/265 (25%), Positives = 96/265 (36%), Gaps = 63/265 (23%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           G VA+VTGG SG+G A       +GA V    + +   +   +  +  R           
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDNCRFVPVDVT---- 57

Query: 102 AISADLGFDENC-KRVVDEVVNAYGKIDILVNNAAVQYKAGSV-----EEIDEERLERVF 155
                    E   K  +      +G++DI+VN A +   A +      +    E  +RV 
Sbjct: 58  --------SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVI 109

Query: 156 RTNIFSHFFMTRHSLRHM--NEGSA------IINTTSVE--------------------- 186
             N+   F + R +   M  NE         IINT SV                      
Sbjct: 110 NVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGM 169

Query: 187 --PLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAG 243
             P+     AR LA Q    GIRV  +APG   TPL+ +   E+       +VP   R G
Sbjct: 170 TLPI-----ARDLAPQ----GIRVVTIAPGLFDTPLL-AGLPEKVRDFLAKQVPFPSRLG 219

Query: 244 QPIEVAPCYVFLACNHCSSYITGQV 268
            P E A     +  N    Y+ G+V
Sbjct: 220 DPAEYAHLVQHIIEN---PYLNGEV 241

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 85.7 bits (212), Expect = 8e-20
 Identities = 75/251 (29%), Positives = 111/251 (44%), Gaps = 30/251 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ K A+VTGG  GIG A    +A EGA VA   +     ++A E +     AK  +A+ 
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN----REAAEKVAADIRAKGGNAQ- 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A + D+   ++    V     A G +D+LVNNA    K G   + +    ER+   N+
Sbjct: 56  --AFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINL 112

Query: 160 FSHFFMTRHSLRHMNEGSA--IINTTS-VEPLWHSPEA-------------RGLALQLVE 203
                M    L  M E  A  I+N  S    +  S EA             + +A +   
Sbjct: 113 TGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHAR 172

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQ-----FGSEVPMKRAGQPIEVAPCYVFLACN 258
            GI VN V PGP  T L+       E+ +     F   +P+ R GQP ++    +F + +
Sbjct: 173 HGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSD 232

Query: 259 HCSSYITGQVL 269
             +S+ITGQVL
Sbjct: 233 D-ASFITGQVL 242

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 85.7 bits (212), Expect = 8e-20
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 26/214 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           + L GK A+VTG  SGIG+ +A   A  GA VA   +    +  A    + + +A     
Sbjct: 3   SNLNGKTAVVTGAASGIGKEIALELARAGAAVA---IADLNQDGANAVADEINKAGGKAI 59

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              M    D+  ++     +D+V   +G +DILV+NA +Q     +E       +++   
Sbjct: 60  GVAM----DVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAI 114

Query: 158 NIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQ 200
           ++   F  T+ +L+HM   + G  +I   SV     SP               AR LA +
Sbjct: 115 HVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKE 174

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG 234
             +  +R + V PG + TPL+      E++ + G
Sbjct: 175 GAKHNVRSHVVCPGFVRTPLVDKQI-PEQAKELG 207

Length = 262

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 84.8 bits (210), Expect = 1e-19
 Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 35/250 (14%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKVALVTG   GIG+A+A   A EG  +A  Y +S++   A+ET E + EA    A   +
Sbjct: 4   GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKA--AEETAEEI-EALGRKA---L 57

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE---EIDEERLERVFRTN 158
           A+ A++G  E  K +  ++   +G++D+ VNNAA    +G +    E++E   +     N
Sbjct: 58  AVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAA----SGVLRPAMELEESHWDWTMNIN 113

Query: 159 IFSHFFMTRHSLRHM--NEGSAII------------NTTSVEPLWHSPEA--RGLALQLV 202
             +  F  + + + M    G  II            N T+V     + EA  R LA++L 
Sbjct: 114 AKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELA 173

Query: 203 ERGIRVNGVAPGPIWTPLI---PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
            +GI VN V+ G + T  +   P+   EE      ++ P  R  +P +VA   +FL C+ 
Sbjct: 174 PKGIAVNAVSGGAVDTDALKHFPN--REELLEDARAKTPAGRMVEPEDVANAVLFL-CSP 230

Query: 260 CSSYITGQVL 269
            +  I GQ +
Sbjct: 231 EADMIRGQTI 240

Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 84.5 bits (209), Expect = 2e-19
 Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 24/197 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVALVTG  SGIG A A   A EGA VA      + ++     LE L +   ++   
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAI--AARRVDR-----LEALADELEAEGGK 53

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + +  D+  ++     V+  V A G++DILVNNA +    G VE+ D     R+  TN+
Sbjct: 54  ALVLELDVTDEQQVDAAVERTVEALGRLDILVNNAGIML-LGPVEDADTTDWTRMIDTNL 112

Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLALQLVE 203
               + T  +L H        I+N +SV        +               GL  ++ E
Sbjct: 113 LGLMYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTE 172

Query: 204 RGIRVNGVAPGPIWTPL 220
           RG+RV  + PG + T L
Sbjct: 173 RGVRVVVIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.0 bits (208), Expect = 2e-19
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 10/147 (6%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GK AL+TG   GIGRAVA   A EG  V      ++ E++ +   E +          
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLL---ARTEENLKAVAEEVEAYGVKVV-- 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
               +AD+   E     ++++ N  G IDIL+NNA +  K G   E+D    E++ + N+
Sbjct: 60  --IATADVSDYEEVTAAIEQLKNELGSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNL 116

Query: 160 FSHFFMTRHSLRHMNEGSA--IINTTS 184
              ++ TR  L  M E  +  IIN +S
Sbjct: 117 MGVYYATRAVLPSMIERQSGDIINISS 143

Length = 239

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 83.8 bits (207), Expect = 3e-19
 Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA++TG ++G+G+ +A   A  GA +    V   E  + Q  +E L        + 
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADI--VGVGVAEAPETQAQVEAL-------GRK 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              I+ADL   ++   +V + V   G IDIL+NNA +  +   + E   +  + V   N 
Sbjct: 57  FHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLL-EFGNKDWDDVININQ 115

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTS---------VEPLWHSPEA-----RGLALQLV 202
            + FF+++   +       G  IIN  S         V     S  A     R LA +L 
Sbjct: 116 KTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELS 175

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
           +  I VN +APG + T    +  ++   +      +P  R G P ++A   +FL+ +  S
Sbjct: 176 QYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLS-SSAS 234

Query: 262 SYITGQVL 269
            Y+TG  L
Sbjct: 235 DYVTGYTL 242

Length = 251

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 83.2 bits (206), Expect = 3e-19
 Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 36/231 (15%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTG   GIG  +A   A +G  V+    ++ E+  A        EA   DA+DP  
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGL-RNPEDLAALSASGGDVEAVPYDARDPED 59

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
             A          +VD + + +G+ID+LV+NA +     ++ E  +  LE  F  N+ + 
Sbjct: 60  ARA----------LVDALRDRFGRIDVLVHNAGIGRP-TTLREGSDAELEAHFSINVIAP 108

Query: 163 FFMTRHSLRHMNE-GSA-IINTTSVE---PLWHSPE-----------ARGLALQLVERGI 206
             +TR  L  + E GS  ++   S+     L  +             A  L  +  + G+
Sbjct: 109 AELTRALLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGV 168

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           RV+ V PG + TP+       +     G+  P     QP ++A   V +  
Sbjct: 169 RVSAVCPGFVDTPMA------QGLTLVGAFPPE-EMIQPKDIA-NLVRMVI 211

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 83.6 bits (207), Expect = 5e-19
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 32/254 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GK+AL+TG   GIG A+A  YA  GAT+ F  +        QE ++    A      +
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDIN-------QELVDKGLAAYRELGIE 60

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                 D+  ++  + +V ++    G IDILVNNA +  K   + E+  E   +V   ++
Sbjct: 61  AHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGI-IKRIPMLEMSAEDFRQVIDIDL 119

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSV------EPLWHSPEARG--------LALQLVE 203
            + F +++  +  M +     IIN  S+      E +     A+G        +A +  E
Sbjct: 120 NAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGE 179

Query: 204 RGIRVNGVAPGPIWTP------LIPSSFSEEESAQF-GSEVPMKRAGQPIEVAPCYVFLA 256
             I+ NG+ PG I TP       + +  S     QF  ++ P  R G P ++A   VFLA
Sbjct: 180 ANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLA 239

Query: 257 CNHCSSYITGQVLH 270
            +  S+++ G +L+
Sbjct: 240 SD-ASNFVNGHILY 252

Length = 265

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.5 bits (207), Expect = 5e-19
 Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 51/263 (19%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L+ KV ++TGG  G+GRA+A   A +GA +A   +    ++  +E +       T    
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL---NQEKLEEAVAECGALGT---- 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAA-------VQYKAGSVEE-IDEER 150
           +    +A++  +E+ +    ++   +G+++ L+NNA        V+ K G V   +  E+
Sbjct: 55  EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQ 114

Query: 151 LERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEAR------------ 195
            + V   N+   F   R +   M E      IIN +S+        AR            
Sbjct: 115 FQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI--------ARAGNMGQTNYSAS 166

Query: 196 ---------GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPI 246
                      A +L   GIRV  +APG I T +  ++   E   +    +P+ R G+P 
Sbjct: 167 KAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMT-AAMKPEALERLEKMIPVGRLGEPE 225

Query: 247 EVAPCYVFLACNHCSSYITGQVL 269
           E+A    F+  N    Y+TG+VL
Sbjct: 226 EIAHTVRFIIEN---DYVTGRVL 245

Length = 253

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.3 bits (206), Expect = 5e-19
 Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 26/193 (13%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+GK   + G   G+G AVA+    EGA V    + S+ E   +   + L     S   
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQV---CINSRNENKLKRMKKTL-----SKYG 53

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           +   +  D+   E+ + V+++       ID LV      Y   +VEE     LE +   +
Sbjct: 54  NIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVG-GYVEDTVEEFSG--LEEMLTNH 110

Query: 159 IFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-SP--------------EARGLALQLVE 203
           I    +    SLR + EGS+I+  +S+  ++  SP                  LA +L+ 
Sbjct: 111 IKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLG 170

Query: 204 RGIRVNGVAPGPI 216
           RGIRVNG+AP  I
Sbjct: 171 RGIRVNGIAPTTI 183

Length = 238

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 83.1 bits (206), Expect = 6e-19
 Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 30/203 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKTSDAKDPM 101
           KVA++TGG SGIG A A     +GA VA   +   E   A   L  I  + K        
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVA--ILDRNENPGAAAELQAINPKVKA------T 52

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER-LERVFRTNI- 159
            +  D+   E       + +  +G++DIL+NNA +  +   +         E+    N+ 
Sbjct: 53  FVQCDVTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLT 112

Query: 160 ----FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA--------------RGLALQL 201
                ++  +         +G  I+N  SV  L+ +P+               R LA  L
Sbjct: 113 GVINTTYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLL 172

Query: 202 VER-GIRVNGVAPGPIWTPLIPS 223
             + G+RVN + PG   TPL+P 
Sbjct: 173 EYKTGVRVNAICPGFTNTPLLPD 195

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 83.2 bits (206), Expect = 6e-19
 Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 53/257 (20%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP- 100
            KV ++TGG SG+G+A+A  +A EGA V  T            T E L EAK    + P 
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVIT----------GRTKEKLEEAKLEIEQFPG 50

Query: 101 --MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + +  D+   E+ +++V+++   +G+ID L+NNAA  +   + E++       V    
Sbjct: 51  QVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPA-EDLSVNGWNSVIDIV 109

Query: 159 IFSHFFMTRHSLRHMNE----GSAIINTTSVEPLW-------HSPEARGLALQL-----V 202
           +   F+ ++   ++  E    G+ IIN  +    W       HS  A+   L +     V
Sbjct: 110 LNGTFYCSQAVGKYWIEKGIKGN-IINMVATYA-WDAGPGVIHSAAAKAGVLAMTRTLAV 167

Query: 203 E----RGIRVNGVAPGPI---------WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
           E     GIRVN +APGPI         W        SEE + +    VP+ R G P E+A
Sbjct: 168 EWGRKYGIRVNAIAPGPIERTGGADKLWE-------SEEAAKRTIQSVPLGRLGTPEEIA 220

Query: 250 PCYVFLACNHCSSYITG 266
               FL  +  ++YI G
Sbjct: 221 GLAYFLLSDE-AAYING 236

Length = 252

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 83.3 bits (206), Expect = 7e-19
 Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 39/260 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+G+V LVTGG SG+GRA+   +  EGA VA   V  +     QE LE           
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVA---VLDKSAAGLQE-LEAAHGDAV---- 53

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL----ERV 154
             + +  D+   ++ K  V   V A+GKID L+ NA +   + ++ +I ++R+    + V
Sbjct: 54  --VGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEV 111

Query: 155 FRTNIFSHFFMTRHSLRHM--NEGSAIINTTSV-------EPLWHSPE------ARGLAL 199
           F  N+  +    + +L  +  + GS I   ++         PL+ + +       + LA 
Sbjct: 112 FHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAF 171

Query: 200 QLVERGIRVNGVAPGPIWTPLI-PSSFSEEESA--------QFGSEVPMKRAGQPIEVAP 250
           +L    +RVNGVAPG + + L  P S    + +           S +P+ R     E   
Sbjct: 172 ELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTG 230

Query: 251 CYVFLACNHCSSYITGQVLH 270
            YVF A    +   TG VL+
Sbjct: 231 AYVFFATRGDTVPATGAVLN 250

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 83.2 bits (206), Expect = 7e-19
 Identities = 69/263 (26%), Positives = 102/263 (38%), Gaps = 52/263 (19%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-------EILREA 92
           L G+VA+VTGG SGIG A        GA+VA      +    A+  L        +L  A
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLL--A 63

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
              D  D   ++A              V   +G +D+LVNNA  Q +  +  +  ++   
Sbjct: 64  ARCDVLDEADVAA----------FAAAVEARFGGVDMLVNNAG-QGRVSTFADTTDDAWR 112

Query: 153 RVFRTNIFSHFFMTRHSLRHMN--EGSAIINTTSVEPLWHSPEA---------------- 194
                  FS    TR  L  +     ++I+   S+  L   PE                 
Sbjct: 113 DELELKYFSVINPTRAFLPLLRASAAASIVCVNSL--LALQPEPHMVATSAARAGLLNLV 170

Query: 195 RGLALQLVERGIRVNGVAPGPI----W-----TPLIPSSFSEEESAQFGSE--VPMKRAG 243
           + LA +L  +G+RVN +  G +    W         P    E  +A    +  +P+ R G
Sbjct: 171 KSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLG 230

Query: 244 QPIEVAPCYVFLACNHCSSYITG 266
           +P E A    FLA +  SSY TG
Sbjct: 231 RPDEAARALFFLA-SPLSSYTTG 252

Length = 265

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 8e-19
 Identities = 73/254 (28%), Positives = 106/254 (41%), Gaps = 33/254 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG  SG+G   A   A  GA V     +        E L+ LR    ++   
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV-------ERLKELRAEIEAEGGA 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +S D+   ++ K  V       G IDILVNN+ V      + ++     + VF TN 
Sbjct: 60  AHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNT 118

Query: 160 FSHFFMT-----RHSLRHMNEGSA-----IINTTSVEPLWHSPE--------------AR 195
              FF+      R   R    G+      IIN  SV  L   P+               R
Sbjct: 119 RGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTR 178

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
            +AL+    GI VN + PG I T +    +  E+  +  S +P KR G+P ++    + L
Sbjct: 179 AMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLL 238

Query: 256 ACNHCSSYITGQVL 269
           A +  S +I G ++
Sbjct: 239 AADE-SQFINGAII 251

Length = 258

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 9e-19
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 30/256 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           SN+++GK  +++GG  GIG+A+ + +A  G  +AFTY  + EE  A +  E L +     
Sbjct: 3   SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEE--ANKIAEDLEQKYGIK 60

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA-----GSVEEIDEERL 151
           AK   A   ++   E  K +  ++   + ++D  ++NA +  +A          +  + L
Sbjct: 61  AK---AYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGL 117

Query: 152 ERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------AR 195
             ++   + +     + + + M +  G +II+ +S   L +                  +
Sbjct: 118 NNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVK 177

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEESAQFGSEVPMKRAGQPIEVAPCYV 253
             A +L E+ IRVN V+ GPI T  +  +F+  EE  A+     P+ R GQP ++A   +
Sbjct: 178 YAATELGEKNIRVNAVSGGPIDTDAL-KAFTNYEEVKAKTEELSPLNRMGQPEDLAGACL 236

Query: 254 FLACNHCSSYITGQVL 269
           FL C+  +S++TGQ +
Sbjct: 237 FL-CSEKASWLTGQTI 251

Length = 260

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 83.0 bits (206), Expect = 1e-18
 Identities = 57/145 (39%), Positives = 73/145 (50%), Gaps = 18/145 (12%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTG  SGIGRA A   A  G  V F   ++         +E+L      D  D   
Sbjct: 5   KVALVTGASSGIGRATAEKLARAGYRV-FGTSRNPARAAPIPGVELL----ELDVTD--- 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
                  D + +  VDEV+   G+ID+LVNNA V   AG+ EE    + + +F TN+F  
Sbjct: 57  -------DASVQAAVDEVIARAGRIDVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGI 108

Query: 163 FFMTRHSLRHMN-EGSA-IINTTSV 185
             MTR  L HM  +GS  IIN +SV
Sbjct: 109 LRMTRAVLPHMRAQGSGRIINISSV 133

Length = 270

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 70/248 (28%), Positives = 107/248 (43%), Gaps = 40/248 (16%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           + ALVTG    IGRA+A   A  G  VA  Y +S++E  A+     +R A    A   +A
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE--AEALAAEIR-ALGRRA---VA 63

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + ADL  +   + +V     A G I +LVNNA++ ++  S         +R   TN+ + 
Sbjct: 64  LQADLADEAEVRALVARASAALGPITLLVNNASL-FEYDSAASFTRASWDRHMATNLRAP 122

Query: 163 FFMTRHSLRHMNEGSA--IIN----------------TTSVEPLWHSPEARGLALQLVER 204
           F + +   R +   +   ++N                T S   LW +   R LA  L  R
Sbjct: 123 FVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTA--TRTLAQALAPR 180

Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV---PMKRAGQPIEVAPCYVFLACNHCS 261
            IRVN + PGP     +PS     E   F  +    P+ R   P E+A    +L     +
Sbjct: 181 -IRVNAIGPGPT----LPSGRQSPE--DFARQHAATPLGRGSTPEEIAAAVRYLL---DA 230

Query: 262 SYITGQVL 269
             +TGQ++
Sbjct: 231 PSVTGQMI 238

Length = 258

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKV ++TG   GIGRA+A   A  GA +             +  L  L +       + +
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARN-------ETRLASLAQELADHGGEAL 53

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+   E C+R+++  V  +G IDILVNNA +   +   E  D    ERV R N   
Sbjct: 54  VVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLG 113

Query: 162 HFFMTRHSLRHM 173
             + T  +L H+
Sbjct: 114 AVYCTHAALPHL 125

Length = 263

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 49/260 (18%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKTSDAKDP 100
           GKV ++TG +SGIG+  A   A  GA V    +  + E+  +E   EI +E   +  +  
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHV---IIACRNEEKGEEAAAEIKKETGNAKVE-- 55

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
             I  DL    + ++  +E +  + ++DIL+NNA +         + ++  E  F  N  
Sbjct: 56  -VIQLDLSSLASVRQFAEEFLARFPRLDILINNAGIMA---PPRRLTKDGFELQFAVNYL 111

Query: 161 SHFFMTRH---SLRHMNEGSAIINTTSV---------EPLWHSPE--------------- 193
            HF +T      L+  +  S I+N +S+           L                    
Sbjct: 112 GHFLLTNLLLPVLKA-SAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLA 170

Query: 194 ----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV--PMKRAGQPIE 247
                R LA +L   G+ VN + PG + T L         S     ++  P  +   P +
Sbjct: 171 NILFTRELARRLEGTGVTVNALHPGVVRTEL----LRRNGSFFLLYKLLRPFLKKS-PEQ 225

Query: 248 VAPCYVFLACNHCSSYITGQ 267
            A   ++ A +     ++G+
Sbjct: 226 GAQTALYAATSPELEGVSGK 245

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 81.9 bits (203), Expect = 3e-18
 Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 32/194 (16%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTG  SGIG+A A   A +G TV   Y        A   ++ + +  +        
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTV---YG-------AARRVDKMEDLASLGVH---P 50

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY-KAGSVEEIDEERLERVFRTNIFS 161
           +S D+  + + K  VD ++   G+ID+LVNNA   Y   G++E++  +   R F  N+F 
Sbjct: 51  LSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAG--YGSYGAIEDVPIDEARRQFEVNLFG 108

Query: 162 HFFMTRHSLRHMNEGSA--IINTTSV-----EPL--W-----HSPEA--RGLALQLVERG 205
              +T+  L HM    +  IIN +S+      PL  W      + E     L L++   G
Sbjct: 109 AARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFG 168

Query: 206 IRVNGVAPGPIWTP 219
           I V  + PG I T 
Sbjct: 169 IDVVVIEPGGIKTE 182

Length = 273

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 4e-18
 Identities = 65/255 (25%), Positives = 99/255 (38%), Gaps = 60/255 (23%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE----------KDAQETLEILREA 92
           +  LVTG   GIG A++   A  G  V      + ++           D ++T   L + 
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQ- 62

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
                                       +N    +D +VNN  +      + +ID   L+
Sbjct: 63  ----------------------------INEIHPVDAIVNNVGIA-LPQPLGKIDLAALQ 93

Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGSA--IINTTSVEPLWHSPE--------------ARG 196
            V+  N+ +   +T+  L  M       I+N  S   ++ + +               R 
Sbjct: 94  DVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICS-RAIFGALDRTSYSAAKSALVGCTRT 152

Query: 197 LALQLVERGIRVNGVAPGPIWTPLI--PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF 254
            AL+L E GI VN VAPGPI T L         EE  +  + +PM+R G P EVA    F
Sbjct: 153 WALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAF 212

Query: 255 LACNHCSSYITGQVL 269
           L  +  + +ITGQVL
Sbjct: 213 LLSDD-AGFITGQVL 226

Length = 234

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 80.4 bits (198), Expect = 9e-18
 Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 48/264 (18%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
            A+VTG    IG ++A     EG  V   Y +S     A      L   + + A   +  
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAA--AASTLAAELNARRPNSA---VTC 57

Query: 104 SADLG----FDENCKRVVDEVVNAYGKIDILVNNAAVQY-----------KAGSVEEIDE 148
            ADL         C+ ++D    A+G+ D+LVNNA+  Y             G  + ++ 
Sbjct: 58  QADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEV 117

Query: 149 ERLERVFRTNIFSHFFMTR-HSLRHMNEGSA-------IINTTSV---EPLW-------- 189
           +  E +F +N  + +F+ +  + R     +        I+N       +PL         
Sbjct: 118 QVAE-LFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMA 176

Query: 190 -HSPEA--RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQP 245
            H+ E   R  AL+L    IRVNGVAPG     L+P +   E    +  +VP+ +R    
Sbjct: 177 KHALEGLTRSAALELAPLQIRVNGVAPG---LSLLPDAMPFEVQEDYRRKVPLGQREASA 233

Query: 246 IEVAPCYVFLACNHCSSYITGQVL 269
            ++A   +FL  +  + YITG  +
Sbjct: 234 EQIADVVIFL-VSPKAKYITGTCI 256

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 80.1 bits (198), Expect = 1e-17
 Identities = 66/248 (26%), Positives = 93/248 (37%), Gaps = 57/248 (22%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            K+A+VTG  SG G        LE A   +  + +    + QE L  L +A   + +  +
Sbjct: 3   KKIAIVTGASSGFGLLTT----LELAKKGYLVIATMRNPEKQENL--LSQATQLNLQQNI 56

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +      D+N       V+   G+ID+LVNNA      G VEEI  E   + F TN+F 
Sbjct: 57  KVQQLDVTDQNSIHNFQLVLKEIGRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFG 115

Query: 162 HFFMTRHSLRHMNE--GSAIINTTSVE---------PLWHSPEA-----RGLALQLVERG 205
              +T+  L +M +     IIN +S+          P   S  A       L L+L   G
Sbjct: 116 AISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFG 175

Query: 206 IRVNGVAPG----PIWTPLIPSSFSEEESAQFGSEVP---------MKR----------- 241
           I V  + PG     IW          E   Q               MK+           
Sbjct: 176 IDVALIEPGSYNTNIW----------EVGKQLAENQSETTSPYKEYMKKIQKHINSGSDT 225

Query: 242 AGQPIEVA 249
            G PI+VA
Sbjct: 226 FGNPIDVA 233

Length = 280

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 79.4 bits (196), Expect = 1e-17
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 36/254 (14%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            +VA+V GG   +G  + H  A  G  VA   + S+  +       +  E      +   
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEK------VADEINAEYGEKAY 55

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
              AD   +++   +   V   + ++D+LV +A +  K+  + + +    +R  + N+  
Sbjct: 56  GFGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIA-KSAKITDFELGDFDRSLQVNLVG 114

Query: 162 HFFMTRHSLRHM----NEGSAI-INTTS--VEPLWHSPEARG----------LALQLVER 204
           +F   R   + M     +G  I IN+ S  V    +S  +            LAL L E 
Sbjct: 115 YFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEH 174

Query: 205 GIRVNGVAPG-----PIWTPLIPS-----SFSEEESAQ-FGSEVPMKRAGQPIEVAPCYV 253
           GI VN +  G     P++  L+P         E E  Q +  +VP+KR     +V    +
Sbjct: 175 GITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNMLL 234

Query: 254 FLACNHCSSYITGQ 267
           F A    +SY TGQ
Sbjct: 235 FYASPK-ASYCTGQ 247

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 80.4 bits (199), Expect = 2e-17
 Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 16/164 (9%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            +  +V ++TG  +G+GRA A  +A  GA V    + ++ E+  +     +R A      
Sbjct: 5   PIGRQVVVITGASAGVGRATARAFARRGAKVV---LLARGEEGLEALAAEIRAAGG---- 57

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           + +A+ AD+   E  +   D      G ID  VNNA V    G  E++  E   RV    
Sbjct: 58  EALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVT 116

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEARGLALQ 200
                  T  +LRHM      AII   S          R + LQ
Sbjct: 117 YLGVVHGTLAALRHMRPRDRGAIIQVGSAL------AYRSIPLQ 154

Length = 334

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 79.1 bits (195), Expect = 2e-17
 Identities = 64/239 (26%), Positives = 95/239 (39%), Gaps = 44/239 (18%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
            +VTG   GIGRAVA      GATV    +      +  + L +       D  D  A+ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTP----LDVADAAAV- 55

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
                 E C R++ E     G ID LVN A V  + G+ + +  E  E+ F  N+   F 
Sbjct: 56  -----REVCSRLLAEH----GPIDALVNCAGV-LRPGATDPLSTEDWEQTFAVNVTGVFN 105

Query: 165 MTRHSLRHM--NEGSAIINTTSVEPLWHSPEAR----------------GLALQLVERGI 206
           + +    HM      AI+   S     H P                    L L+L   G+
Sbjct: 106 LLQAVAPHMKDRRTGAIVTVASNAA--HVPRISMAAYGASKAALASLSKCLGLELAPYGV 163

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESA---------QFGSEVPMKRAGQPIEVAPCYVFLA 256
           R N V+PG   T +  + + +E+ A         QF   +P+ +  QP ++A   +FLA
Sbjct: 164 RCNVVSPGSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLA 222

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 78.1 bits (193), Expect = 4e-17
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 12/145 (8%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           + L+TGG SGIGR +A  +A  GA V    +    EK A+ET   +R+A           
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDIN---EKGAEETANNVRKAGGK-VH---YY 53

Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
             D+   E       ++    G + IL+NNA V      + E+ +E +E+ F  N  +HF
Sbjct: 54  KCDVSKREEVYEAAKKIKKEVGDVTILINNAGVVS-GKKLLELPDEEIEKTFEVNTLAHF 112

Query: 164 FMTRHSLRHM---NEGSAIINTTSV 185
           + T+  L  M   N G  I+   SV
Sbjct: 113 WTTKAFLPDMLERNHGH-IVTIASV 136

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 78.0 bits (192), Expect = 4e-17
 Identities = 64/248 (25%), Positives = 104/248 (41%), Gaps = 34/248 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  ++ LVTG   GIGR  A  YA  GATV    +   EEK  Q    I  E        
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVIL--LGRNEEKLRQVADHINEEGGRQ---- 55

Query: 100 PMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
           P     DL     ENC+++   +   Y ++D +++NA +      + E + +  + V + 
Sbjct: 56  PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQV 115

Query: 158 NIFSHFFMTRHSLRHMN---EGSAIINTTSV----EPLWHSPEA---------RGLALQL 201
           N+ + F +T+  L  +     GS +  ++SV       W +            + LA + 
Sbjct: 116 NVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEY 175

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            +R +RVN + PG   T +  S+F  E+        P K    P ++ P Y++L  +  S
Sbjct: 176 QQRNLRVNCINPGGTRTAMRASAFPTED--------PQKLK-TPADIMPLYLWLMGDD-S 225

Query: 262 SYITGQVL 269
              TG   
Sbjct: 226 RRKTGMTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 77.1 bits (190), Expect = 8e-17
 Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 37/249 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATV-AFTYVKSQEEKDAQETLEILREAKTSDAK 98
             GK ALVTG   GIGRA     A  GA V A +  ++  +   +E   I          
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGI---------- 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               +  DL   +      +E + + G +D+LVNNAAV        E+ +E  +R F  N
Sbjct: 55  --EPVCVDLSDWD----ATEEALGSVGPVDLLVNNAAVA-ILQPFLEVTKEAFDRSFDVN 107

Query: 159 IFSHFFMTRHSLRHMNE---GSAIINTTSV--------EPLWHSPEA------RGLALQL 201
           + +   +++   R M       +I+N +S           ++ S +A      + +AL+L
Sbjct: 108 VRAVIHVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALEL 167

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
               IRVN V P  + T +   ++S+ E++ +  + +P+ +  +  +V    +FL  +  
Sbjct: 168 GPHKIRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDK- 226

Query: 261 SSYITGQVL 269
           SS  TG  L
Sbjct: 227 SSMTTGSTL 235

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 77.6 bits (192), Expect = 9e-17
 Identities = 61/196 (31%), Positives = 82/196 (41%), Gaps = 33/196 (16%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE-AKTSDAKDP 100
            K  L+TG  SG GRA+A      G  V  T V+S+  +   E L   R  A+  D  D 
Sbjct: 4   MKTWLITGVSSGFGRALAQAALAAGHRVVGT-VRSEAARADFEALHPDRALARLLDVTDF 62

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
            AI A          VV +    +G ID+LVNNA   ++ G++EE     + R F  N+F
Sbjct: 63  DAIDA----------VVADAEATFGPIDVLVNNAGYGHE-GAIEESPLAEMRRQFEVNVF 111

Query: 161 SHFFMTRHSLRHMNEGSA--IINTTSVEPLWHSP----------------EARGLALQLV 202
               MT+  L  M       I+N TS+  L   P                E+  LA ++ 
Sbjct: 112 GAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISES--LAKEVA 169

Query: 203 ERGIRVNGVAPGPIWT 218
             GI V  V PG   T
Sbjct: 170 PFGIHVTAVEPGSFRT 185

Length = 277

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 76.7 bits (189), Expect = 1e-16
 Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 10/145 (6%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           V ++TG  SGIGRA A  +A  GA V    + ++  +   E    +RE       + +A+
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVV---LAARSAEALHELAREVRELGG----EAIAV 54

Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
            AD+      +R  D  V  +G+ID  VNNA V    G  E++  E   RVF  N   H 
Sbjct: 55  VADVADAAQVERAADTAVERFGRIDTWVNNAGVAV-FGRFEDVTPEEFRRVFDVNYLGHV 113

Query: 164 FMTRHSLRHMNE--GSAIINTTSVE 186
           + T  +L H+    G A+IN  S+ 
Sbjct: 114 YGTLAALPHLRRRGGGALINVGSLL 138

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 75.7 bits (186), Expect = 2e-16
 Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 33/247 (13%)

Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LVTG   GIGRA+A+  A +G  +   Y   +   DA+  +  ++ A+  +A+    +  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGR--SDAESVVSAIQ-AQGGNAR---LLQF 55

Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
           D+     C+ +++  +  +G    +V NA +   A +   + EE  + V  TN+   F+ 
Sbjct: 56  DVADRVACRTLLEADIAEHGAYYGVVLNAGITRDA-AFPALSEEDWDIVIHTNLDG-FYN 113

Query: 166 TRHSLR----HMNEGSAIINTTSVEPL--------WHSPEA------RGLALQLVERGIR 207
             H          +G  II   SV  +        + + +A      + LA++L +R I 
Sbjct: 114 VIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKIT 173

Query: 208 VNGVAPGPIWTPLIPSSFSEEESA--QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           VN +APG I T ++    +E E    +    VPM R GQP EVA    FL  +  +SY+T
Sbjct: 174 VNCIAPGLIDTEML----AEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDG-ASYVT 228

Query: 266 GQVLHPN 272
            QV+  N
Sbjct: 229 RQVISVN 235

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 23/192 (11%)

Query: 44  VALVTGGDSGIGRAVAH-CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           V ++TG   GIGRA+A         +V     +S+E    QE  E LR            
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEE--PLQELKEELRPGLRVTT----- 53

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + ADL      +++++ +    G+ D+L+NNA        +E ID + L++ F  N+ S 
Sbjct: 54  VKADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSP 113

Query: 163 FFMTRHSLRHMNEGSA---IINTTS---VEPLWH------SPEARGLALQLV---ERGIR 207
             +T   LR   +      ++N +S   V P         S  AR +  +++   E  +R
Sbjct: 114 VCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEEPDVR 173

Query: 208 VNGVAPGPIWTP 219
           V   APG + T 
Sbjct: 174 VLSYAPGVVDTD 185

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 76.0 bits (187), Expect = 3e-16
 Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 23/247 (9%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
            + +  LVTGG SGIG+ VA      GA V    V    +K A    EI        A  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAV--MIVGRNPDKLAAAAEEI---EALKGAGA 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                AD+  ++   R VD     +G++  +V+ A      G + +ID +   R    N+
Sbjct: 60  VRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNV 119

Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEP----LW---HSPEARGL-------ALQLVE 203
               ++ +H+ R +    G + +  +S+       W   +      +       A +L  
Sbjct: 120 NGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGP 179

Query: 204 RGIRVNGVAPGPIWTPLI-PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             +RVN + PG I T L+ P + S E SA + +  P+ R G+  +VA   +FL  +  +S
Sbjct: 180 SWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDA-AS 238

Query: 263 YITGQVL 269
           +ITGQV+
Sbjct: 239 WITGQVI 245

Length = 276

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 75.2 bits (185), Expect = 6e-16
 Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 29/253 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK+ALVTG   GIGR +A      GATV  T       +     L    E   +    
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYIT------GRTILPQLPGTAEEIEARGGK 54

Query: 100 PMAISADLGFDENCKRVVDEVVN-AYGKIDILVNNA--AVQYKAGSVE----EIDEERLE 152
            + +  D   D+  + + + V     G++DILVNNA  AVQ     V     E      +
Sbjct: 55  CIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWD 114

Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGS----AIINTT-SVEPLWHSPE----------ARGL 197
            +    + +H+  + ++   M +       II++T  +E L++             A  +
Sbjct: 115 DINNVGLRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVAYGVGKAAIDRMAADM 174

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIE-VAPCYVFLA 256
           A +L   G+ V  + PG + T L+     ++E +    E      G+  E    C V LA
Sbjct: 175 AHELKPHGVAVVSLWPGFVRTELVLEMPEDDEGSWHAKERDAFLNGETTEYSGRCVVALA 234

Query: 257 CNHCSSYITGQVL 269
            +     ++G+VL
Sbjct: 235 ADPDLMELSGRVL 247

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 26/190 (13%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR-EAKTSDAKDPM 101
           K  L+TG  SGIG A A  +A  GA +  T  +        E L+ L  E         +
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRR-------AERLQELADELGAKFPVKVL 53

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+   E+ +  ++ +   +  IDILVNNA +       +E D E  E +  TN+  
Sbjct: 54  PLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKG 113

Query: 162 HFFMTRHSLRHM---NEGSAIINTTSVEPLW------------HSPEARGLAL--QLVER 204
              +TR  L  M   N+G  IIN  S+   +             +     L L   L+  
Sbjct: 114 LLNVTRLILPIMIARNQGH-IINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGT 172

Query: 205 GIRVNGVAPG 214
           GIRV  + PG
Sbjct: 173 GIRVTNIEPG 182

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 79/269 (29%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
             G+V LVTG   G+GRA A  +A  GA V                +  L   +    K 
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKV---------------VVNDLGGDRKGSGKS 47

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGK------------------------IDILVNNAA 135
             A  AD         VVDE+  A GK                        +DILVNNA 
Sbjct: 48  SSA--ADK--------VVDEIKAAGGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAG 97

Query: 136 VQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHS-- 191
           +  +  S  ++ EE  + V R ++   F +TR +  +M   +   IINT+S   L+ +  
Sbjct: 98  I-LRDRSFAKMSEEDWDLVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFG 156

Query: 192 ----PEARG--------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM 239
                 A+         LA++  +  I  N +AP    + +  +   E+           
Sbjct: 157 QANYSAAKLGLLGLSNTLAIEGAKYNITCNTIAPAAG-SRMTETVMPEDLFDALK----- 210

Query: 240 KRAGQPIEVAPCYVFLACNHCSSYITGQV 268
                P  VAP  ++L   H S  +TG +
Sbjct: 211 -----PEYVAPLVLYLC--HESCEVTGGL 232

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 62/244 (25%), Positives = 94/244 (38%), Gaps = 41/244 (16%)

Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LV GG SGIG A+A  +A EGA V  T      ++ A     +   A           + 
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARV--TIASRSRDRLAAAARALGGGAPVR------TAAL 52

Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
           D+  +      VD      G  D +V  AA     G V  +     +    +  +  + +
Sbjct: 53  DITDEAA----VDAFFAEAGPFDHVVITAA-DTPGGPVRALPLAAAQAAMDSKFWGAYRV 107

Query: 166 TRHSLRHMNEGSAIINTTSVEPLWHSPEA----------------RGLALQLVERGIRVN 209
            R +   +  G ++   +        P A                RGLAL+L    +RVN
Sbjct: 108 ARAA--RIAPGGSLTFVSGF--AAVRPSASGVLQGAINAALEALARGLALELAP--VRVN 161

Query: 210 GVAPGPIWTPLIPSSFSEEESAQFGS---EVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            V+PG + TPL      +   A F +    +P +R GQP +VA   +FLA N    + TG
Sbjct: 162 TVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN---GFTTG 218

Query: 267 QVLH 270
             + 
Sbjct: 219 STVL 222

Length = 230

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 72.6 bits (179), Expect = 4e-15
 Identities = 56/214 (26%), Positives = 82/214 (38%), Gaps = 39/214 (18%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
              ++GKV LVTG + GIGRA               +V+    + A +     R+ ++  
Sbjct: 1   MMDIKGKVVLVTGANRGIGRA---------------FVEQLLARGAAKVYAAARDPESVT 45

Query: 97  AKDP--MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
              P  + +  D+    +    V     A   + ILVNNA +      + E DE+ L   
Sbjct: 46  DLGPRVVPLQLDVTDPAS----VAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAE 101

Query: 155 FRTNIFSHFFMTRH---SLRHMNEGSAIINTTSVEPLWHSPEA--------------RGL 197
             TN F    M R     L   N G AI+N  SV    + P                + L
Sbjct: 102 METNYFGPLAMARAFAPVLAA-NGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQAL 160

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA 231
             +L  +G RV GV PGPI T +     + + S 
Sbjct: 161 RAELAPQGTRVLGVHPGPIDTDMAAGLDAPKASP 194

Length = 238

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 72.2 bits (178), Expect = 5e-15
 Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 47/262 (17%)

Query: 33  DYKPS-NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAF---TYVKSQEEKDAQETLEI 88
            Y+P  + L+ ++ LVTG   GIGR  A  YA  GATV     T  K +   D     EI
Sbjct: 2   HYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYD-----EI 56

Query: 89  LREAKTSDAKDPMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEI 146
                      P  I  DL     +N +++ D +   +G++D +++NA +  + G +E+ 
Sbjct: 57  EAAG----GPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQ 112

Query: 147 DEERLERVFRTNIFSHFFMTRH---SLRHMNEGSAIINTTSVEPLWHSPEA--------- 194
           D E  + V + N+ + F +T+     L      S +  ++SV        A         
Sbjct: 113 DPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG---RQGRANWGAYAVSK 169

Query: 195 -------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIE 247
                  + LA +     +RVN + PG   T +  S+F  E+        P K    P +
Sbjct: 170 FATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGED--------PQKLKT-PED 220

Query: 248 VAPCYVFLACNHCSSYITGQVL 269
           + P Y++L  +  S    GQ  
Sbjct: 221 IMPLYLYLMGDD-SRRKNGQSF 241

Length = 247

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 72.8 bits (179), Expect = 5e-15
 Identities = 69/255 (27%), Positives = 105/255 (41%), Gaps = 32/255 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK---SQEEKDAQETLEILREAKTSD 96
           L G+V +VTG   GIGRA A  +A EGA V    +                ++ E   + 
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +  +A   D+   +    +VD  V  +G +D+LVNNA +  +   +  + EE  + V  
Sbjct: 64  GE-AVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGI-LRDRMIANMSEEEWDAVIA 121

Query: 157 TNIFSHFFMTRHSLRHMNEGS--------AIINTTSVEPLWHSP--------EARGLALQ 200
            ++  HF   RH+  +    S         IINT+S   L  S         +A   AL 
Sbjct: 122 VHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALT 181

Query: 201 LV-----ER-GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF 254
           LV      R G+ VN +AP    T +  + F+E  +     E     A  P  V+P  V+
Sbjct: 182 LVAAAELGRYGVTVNAIAPAA-RTRMTETVFAEMMAKPEEGEFD---AMAPENVSPLVVW 237

Query: 255 LACNHCSSYITGQVL 269
           L        +TG+V 
Sbjct: 238 LGSAESRD-VTGKVF 251

Length = 286

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 71.9 bits (177), Expect = 5e-15
 Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 37/214 (17%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE--EKDAQETLEILREAKT 94
            +      AL+TG  SGIG+A A  +A  G  +A    +SQ+  E  A E      +A  
Sbjct: 1   MSLNSMPRALITGASSGIGKATALAFAKAGWDLALV-ARSQDALEALAAELRSTGVKAAA 59

Query: 95  S--DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
              D  +P AI+            + E++  +G  D+L+NNA + Y  G + E+     +
Sbjct: 60  YSIDLSNPEAIAP----------GIAELLEQFGCPDVLINNAGMAYT-GPLLEMPLSDWQ 108

Query: 153 RVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVE-----PLW--HSPEARGLA----- 198
            V + N+ S F      L  M    G  IIN +S+      P W  +      LA     
Sbjct: 109 WVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKC 168

Query: 199 LQLVER--GIRVNGVAPG----PIW-TPLIPSSF 225
           L   ER  GIRV  +  G    P+W T  + + F
Sbjct: 169 LAEEERSHGIRVCTITLGAVNTPLWDTETVQADF 202

Length = 241

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 28/248 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK  L+TG   GIG  +A   A  GA +    + ++  + A   L         +   
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKL-------RQEGIK 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A   ++   +  +  ++ +    G ID+L+NNA +Q +     E  E+    V   N 
Sbjct: 60  AHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRH-PFTEFPEQEWNDVIAVNQ 118

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVE---------PLWHSPEA-----RGLALQLV 202
            + F +++   R+M     G  IIN  S++         P   S  A     RG+ ++L 
Sbjct: 119 TAVFLVSQAVARYMVKRQAGK-IINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELA 177

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              I+VNG+APG   T +  +   +E  +A      P  R G P E+    VFL+    S
Sbjct: 178 RHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSK-AS 236

Query: 262 SYITGQVL 269
            ++ G +L
Sbjct: 237 DFVNGHLL 244

Length = 254

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 70.2 bits (172), Expect = 2e-14
 Identities = 53/194 (27%), Positives = 75/194 (38%), Gaps = 31/194 (15%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K ALVTG   GIG A A     EG  V      +++E           E         + 
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGIC---ARDEARLAAAAAQELE-------GVLG 50

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           ++ D+  + + +R VD +  A+G +D LVNNA V      VEE+  E    V  TN+   
Sbjct: 51  LAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGV-MKPVEELTPEEWRLVLDTNLTGA 109

Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEARGLA----------------LQLVER 204
           F+    +   +    G  I+N  S+     +    G A                L L E 
Sbjct: 110 FYCIHKAAPALLRRGGGTIVNVGSLAG--KNAFKGGAAYNASKFGLLGLSEAAMLDLREA 167

Query: 205 GIRVNGVAPGPIWT 218
            IRV  V PG + T
Sbjct: 168 NIRVVNVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 70.9 bits (174), Expect = 3e-14
 Identities = 70/265 (26%), Positives = 105/265 (39%), Gaps = 43/265 (16%)

Query: 23  MEPTPQFTSHDYKPSNK---LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE 79
           M P         +P  +   L GK  L+TG  SGIG A A  +A  GATV    V     
Sbjct: 18  MRPPISPQLLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATV----VAVARR 73

Query: 80  KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK 139
           +D    L+ + +  T    D MA+  DL   +    +V +V    G +DIL+NNA    +
Sbjct: 74  EDL---LDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIR 130

Query: 140 AGSVEEIDE-ERLERVFRTNIFSHFFMTRHSLRHMNE-GSA-IIN------TTSVEPLWH 190
               E +D    +ER    N ++   + R     M E G   IIN       +   PL+ 
Sbjct: 131 RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFS 190

Query: 191 SPEARGLALQLVERGI----RVNGVAPGPIWTPLIPS-------------SFSEEESAQF 233
              A   AL  V R I       GV    ++ PL+ +             + + +E+A++
Sbjct: 191 VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYDGLPALTADEAAEW 250

Query: 234 GSEVPMKRAGQ--PIEVAPCYVFLA 256
                M  A +  P+ +AP     A
Sbjct: 251 -----MVTAARTRPVRIAPRVAVAA 270

Length = 293

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 68/278 (24%), Positives = 96/278 (34%), Gaps = 93/278 (33%)

Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI-LREAKTSDAKDPMAIS 104
           ++TG  SGIG A A      G TV                + I LREA          + 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTV----------------IGIDLREAD---------VI 37

Query: 105 ADLGFDENCKRVVDEVV-NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
           ADL   E     + +V+    G +D LVN A V     +           V + N    +
Sbjct: 38  ADLSTPEGRAAAIADVLARCSGVLDGLVNCAGVGGTTVA---------GLVLKVN----Y 84

Query: 164 FMTRHSLRHM------NEGSAIINTTS-------------VEPLWHSPEARGLALQ---- 200
           F  R  +  +        G A +  +S              + L    EAR +AL     
Sbjct: 85  FGLRALMEALLPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAG 144

Query: 201 -------------------------LVERGIRVNGVAPGPIWTPLIPSSFSEE---ESAQ 232
                                    L   G+RVN VAPGP+ TP++ +   +    ES  
Sbjct: 145 QPGYLAYAGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVD 204

Query: 233 FGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
                PM R  +P E+AP   FL  +  +S+I G  L 
Sbjct: 205 -AFVTPMGRRAEPDEIAPVIAFL-ASDAASWINGANLF 240

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.6 bits (174), Expect = 6e-14
 Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 45/254 (17%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG   GIG A+A   A +GA V    V +     A E L     A  ++   
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA-----AGEAL-----AAVANRVG 257

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A++ D+   +   R+ + +   +G +DI+V+NA +  +  ++  +DE R + V   N+
Sbjct: 258 GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGIT-RDKTLANMDEARWDSVLAVNL 316

Query: 160 FSHFFMTRHSLR--HMNEGSAIINTTSVEPLWHSPEA--RG-----------------LA 198
            +   +T   L    + +G  I+  +S+     S  A  RG                 LA
Sbjct: 317 LAPLRITEALLAAGALGDGGRIVGVSSI-----SGIAGNRGQTNYAASKAGVIGLVQALA 371

Query: 199 LQLVERGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
             L ERGI +N VAPG I T +   IP  F+  E+ +  +   +++ G P++VA    +L
Sbjct: 372 PLLAERGITINAVAPGFIETQMTAAIP--FATREAGRRMNS--LQQGGLPVDVAETIAWL 427

Query: 256 ACNHCSSYITGQVL 269
           A +  S  +TG V+
Sbjct: 428 A-SPASGGVTGNVV 440

Length = 450

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 7e-14
 Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 9/124 (7%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
           P   L GKV +VTG   GIG  +A      GA +A   +    E+     L     A+  
Sbjct: 3   PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDL----EEAELAAL----AAELG 54

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
                + + AD+      +   +E V  +G ID++V NA +    GSV ++D +   RV 
Sbjct: 55  GDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIA-SGGSVAQVDPDAFRRVI 113

Query: 156 RTNI 159
             N+
Sbjct: 114 DVNL 117

Length = 296

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 68.8 bits (168), Expect = 1e-13
 Identities = 62/246 (25%), Positives = 93/246 (37%), Gaps = 34/246 (13%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           +ALVT      G A A     +G TV           DA E     R+A  S+     A+
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTV---VCHDASFADAAE-----RQAFESENPGTKAL 54

Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
           S      +  + +VD V+ A G ID+LV+N  +      ++   E  + + F       F
Sbjct: 55  SE-----QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPF 109

Query: 164 FMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------ARG--------LALQLVERGIR 207
            + + ++  M +  G +II  TS  P            AR         LA +L    I 
Sbjct: 110 ALLQAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNIL 169

Query: 208 VNGVAP----GPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           V  + P     P + P      + E   +   +VP+ R G+P E+     FLA       
Sbjct: 170 VYAIGPNFFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRA-DP 228

Query: 264 ITGQVL 269
           ITGQ  
Sbjct: 229 ITGQFF 234

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 51/162 (31%), Positives = 68/162 (41%), Gaps = 14/162 (8%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
               L GKV L+TG  SGIGRA A   A  GATV F   ++ E  D     EI   AK  
Sbjct: 365 LRGPLVGKVVLITGASSGIGRATAIKVAEAGATV-FLVARNGEALDELVA-EI--RAKGG 420

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL---E 152
            A    A + DL         V +++  +G +D LVNNA    +       D  R    E
Sbjct: 421 TA---HAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTD--RFHDYE 475

Query: 153 RVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP 192
           R    N F    +    L HM E     ++N +S+    ++P
Sbjct: 476 RTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP 517

Length = 657

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT---SDAKDPM 101
            L+TG   GIG  +       G        +          L            D  D +
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 102 AISADLGFDENCKRVVDEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
           A SA+             V    G   +D+L+NNA + +  G   E+D E L  VF+ N+
Sbjct: 61  AESAE------------AVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNV 108

Query: 160 FSHFFMTRHSLRHMNEG--SAIINTTS 184
                +T+  L  + +G  + IIN +S
Sbjct: 109 LGPLLLTQAFLPLLLKGARAKIINISS 135

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 67.0 bits (164), Expect = 3e-13
 Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 31/209 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR-EAKTSDAK 98
           ++ K  LVTG + GIG+A        GA   +  V+              +      D  
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           DP +I A        K V           D+++NNA V   A  +EE   E L++    N
Sbjct: 61  DPESIKA---AAAQAKDV-----------DVVINNAGVLKPATLLEEGALEALKQEMDVN 106

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +F    + +     +  N G AI+N  SV  L + P                +GL  +L 
Sbjct: 107 VFGLLRLAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELA 166

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESA 231
            +G  V  V PGPI T +   +   +ES 
Sbjct: 167 AQGTLVLSVHPGPIDTRMAAGAGGPKESP 195

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 67.5 bits (165), Expect = 3e-13
 Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 36/220 (16%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            V L+TG  SGIGRA+A  +   G  V   +  +++ +D +        A   D  D  A
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEV---WATARKAEDVEALAAAGFTAVQLDVNDGAA 58

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA-GSVEEIDEERLERVFRTNIFS 161
           +           R+ +E+   +G +D+L+NNA   Y A G + +   E + R F TN+F+
Sbjct: 59  L----------ARLAEELEAEHGGLDVLINNAG--YGAMGPLLDGGVEAMRRQFETNVFA 106

Query: 162 HFFMTRHSLRHMNEGSA-IINTTSVEPLWHSPEA--------------RGLALQLVERGI 206
              +TR     +      ++N  SV  +  +P A                L L+L   G+
Sbjct: 107 VVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGV 166

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPI 246
           +V  V PG      I S F+   S +    +  +    P+
Sbjct: 167 QVMEVQPGA-----IASQFASNASREAEQLLAEQSPWWPL 201

Length = 274

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 66.8 bits (163), Expect = 5e-13
 Identities = 74/256 (28%), Positives = 108/256 (42%), Gaps = 35/256 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK+A  T    GIG  VA   A  GA V       +  K A+E  +I  E+      D
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKARE--KIKSESNV----D 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              I ADL   E+ +R V E+ N  G+ DI   +     K G   E+  E  E   +  +
Sbjct: 60  VSYIVADLTKREDLERTVKELKNI-GEPDIFFFSTGGP-KPGYFMEMSMEDWEGAVKLLL 117

Query: 160 FSHFFMTRHSLRHMNEG--SAIINTTSV---EPLWH-----------SPEARGLALQLVE 203
           +   ++TR  +  M       II +TSV   EP+ +           +   R LA +L  
Sbjct: 118 YPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGP 177

Query: 204 RGIRVNGVAPGPIWTPLI----------PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
           +GI VNG+ PG I T  +               EE   ++   +P+ R G+P E+     
Sbjct: 178 KGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVA 237

Query: 254 FLACNHCSSYITGQVL 269
           FLA +   SYI G ++
Sbjct: 238 FLASDL-GSYINGAMI 252

Length = 263

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 6e-13
 Identities = 57/213 (26%), Positives = 75/213 (35%), Gaps = 62/213 (29%)

Query: 103 ISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           I ADLG   +    +D  V A  G+ID L N A V   A          +E V R N   
Sbjct: 28  IQADLGDPAS----IDAAVAALPGRIDALFNIAGVPGTAP---------VELVARVNFLG 74

Query: 162 HFFMTRHSLRHMNEGSAIINTTSV---EPLWHSPEARGLA-------------------- 198
              +T   L  M  G AI+N  S+   E        + LA                    
Sbjct: 75  LRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALA 134

Query: 199 --------------LQ-----LVERGIRVNGVAPGPIWTPLIP---SSFSEEESAQFGSE 236
                         ++        RGIRVN VAPGP++TP++    S   +E        
Sbjct: 135 TGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAK- 193

Query: 237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
             M R     E A   VFL C+  + +I G  L
Sbjct: 194 -RMGRPATADEQAAVLVFL-CSDAARWINGVNL 224

Length = 241

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 67.7 bits (166), Expect = 8e-13
 Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 23/159 (14%)

Query: 35  KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE--- 91
           +P     GK+ +VTG  SGIGR  A  +A EGA V  + +   +E  A+ T E++R    
Sbjct: 308 RPRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDI---DEAAAERTAELIRAAGA 364

Query: 92  ---AKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
              A   D  D  A+          +   + V   +G  DI+VNNA +   AG   +   
Sbjct: 365 VAHAYRVDVSDADAM----------EAFAEWVRAEHGVPDIVVNNAGIGM-AGGFLDTSA 413

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTS 184
           E  +RV   N++      R   R M     G  I+N  S
Sbjct: 414 EDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS 452

Length = 582

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 64.3 bits (157), Expect = 3e-12
 Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 36/221 (16%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL G   L+TGG SGIG A+A  +   G TV  T              E L EAK  +  
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIIT----------GRREERLAEAK-KELP 50

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG-SVEEIDEERLERVFRT 157
           +   I  D+G  E+ + + + +++ Y  +DIL+NNA +Q          D ++ +    T
Sbjct: 51  NIHTIVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDT 110

Query: 158 NIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPEARG--------------LAL-- 199
           N+     + +  L H+ +   + I+N +S   L   P A                LAL  
Sbjct: 111 NLIGPIRLIKAFLPHLKKQPEATIVNVSSG--LAFVPMAANPVYCATKAALHSYTLALRH 168

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMK 240
           QL + G+ V  + P  + T L      E  +   G+   M 
Sbjct: 169 QLKDTGVEVVEIVPPAVDTEL----HEERRNPDGGTPRKMP 205

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.0 bits (156), Expect = 4e-12
 Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 38/256 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL--EILREAKTSD 96
           ++  +  LVTGG  G+G A+A  +A EGA V   Y +S   +DA E L  E+   A    
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQS---EDAAEALADELGDRA---- 54

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGK-IDILVNNAAVQYK-----AGSVEEIDEER 150
               +A+ AD+   E  + +       +GK I  +VNNA   +          ++I  E 
Sbjct: 55  ----IALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWED 110

Query: 151 LERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTS------VEPLWHSPEA-------- 194
            ++    ++       + +L  M E     IIN  +      V P +H            
Sbjct: 111 FQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP-YHDYTTAKAALLGL 169

Query: 195 -RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            R LA +L   GI VN V+ G + T    ++  +E      +  P+++   P E A   +
Sbjct: 170 TRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVL 229

Query: 254 FLACNHCSSYITGQVL 269
           F A    +  +TGQ L
Sbjct: 230 FFASPW-ARAVTGQNL 244

Length = 253

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 63.2 bits (154), Expect = 9e-12
 Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 48/262 (18%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK ALVTG   +  I   +A      GA +  TY+  ++ +          E K  + 
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGR---------FEKKVREL 54

Query: 98  KDPMAIS----ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEER 150
            +P+  S     D+  D   +   + +   +GK+DILV+  A   K    G       E 
Sbjct: 55  TEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREG 114

Query: 151 LERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP------------EA--RG 196
             R    + +S   + + +   M+EG +I+  T +  +   P            EA  R 
Sbjct: 115 FARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRY 174

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQFGSEVPMKRAGQPIEV 248
           LA +L  + IRVN ++ GPI T L  S+           EE A      P++R     EV
Sbjct: 175 LAAELGPKNIRVNAISAGPIRT-LASSAVGGILDMIHHVEEKA------PLRRTVTQTEV 227

Query: 249 APCYVFLACNHCSSYITGQVLH 270
                FL  +  +S ITGQ ++
Sbjct: 228 GNTAAFL-LSDLASGITGQTIY 248

Length = 258

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 62.7 bits (152), Expect = 1e-11
 Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 25/240 (10%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           ++A VTGG  GIG ++      +G  V      +   +          E + +   D +A
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVK------WLEDQKALGFDFIA 57

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              ++G  ++ K   D+V    G+ID+LVNNA +        ++  E    V  TN+ S 
Sbjct: 58  SEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDV-VFRKMTREDWTAVIDTNLTSL 116

Query: 163 FFMTRHSLRHMNEG--SAIINTTSV--------EPLWHSPEA------RGLALQLVERGI 206
           F +T+  +  M E     IIN +SV        +  + + +A        LA ++  +G+
Sbjct: 117 FNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV 176

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN V+PG I T ++  +   +   +  + +P++R G P E+     +LA    S + TG
Sbjct: 177 TVNTVSPGYIGTDMV-KAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEE-SGFSTG 234

Length = 246

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 40/198 (20%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATV-AFTYVKSQ----EEKDAQETLEILREAKTSD 96
            K  L+TG  SG GR VA   A +G  V A   +  Q      + A+  L +    +  D
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLAL--RVEKLD 59

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
             D +  +    +D                +D+L+NNA +  +AG+V +I  E +  +F 
Sbjct: 60  LTDAIDRAQAAEWD----------------VDVLLNNAGIG-EAGAVVDIPVELVRELFE 102

Query: 157 TNIFSHFFMTRHSLRHM-NEGSAIINTTS------VEPLW-------HSPEARGLALQ-- 200
           TN+F    +T+  +R M   G   +  TS        P         H+ EA   A+   
Sbjct: 103 TNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAE 162

Query: 201 LVERGIRVNGVAPGPIWT 218
           L   GI+V  V PGP  T
Sbjct: 163 LKPFGIQVATVNPGPYLT 180

Length = 257

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 55/209 (26%), Positives = 82/209 (39%), Gaps = 42/209 (20%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK A+VTGG SG+G       A  GA V    V ++    A+E L  +   +      
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVI---VPARRPDVAREALAGIDGVEVVM--- 77

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                 DL   E+ +   +  +++  +IDIL+NNA V       E    +  E  F TN 
Sbjct: 78  -----LDLADLESVRAFAERFLDSGRRIDILINNAGVM---ACPETRVGDGWEAQFATNH 129

Query: 160 FSHFFMTRHSLRHMNEG--SAIINTTSV----EPL-WHSP---------EARG------- 196
             HF +       +  G  + ++  +S      P+ W  P          A G       
Sbjct: 130 LGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANA 189

Query: 197 -LALQL----VERGIRVNGVAPGPIWTPL 220
             A+ L     ++G+R   V PG I TPL
Sbjct: 190 LFAVHLDKLGKDQGVRAFSVHPGGILTPL 218

Length = 315

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 52/237 (21%), Positives = 87/237 (36%), Gaps = 29/237 (12%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           VA V G   G+G A+A  +A EG +VA    + + + +A     I        AK   A+
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVAL-AARREAKLEALLVDII--RDAGGSAK---AV 54

Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
             D   ++    + D +    G +++LV NA        + E      E+V+    F  F
Sbjct: 55  PTDARDEDEVIALFDLIEEEIGPLEVLVYNAGAN-VWFPILETTPRVFEKVWEMAAFGGF 113

Query: 164 FMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIR 207
              R + + M       II T +   L                   A+ +A +L  +GI 
Sbjct: 114 LAAREAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIH 173

Query: 208 V-NGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           V + +  G I T  I   F + +  +    +       P  +A  Y  L     S++
Sbjct: 174 VAHVIIDGGIDTDFIRERFPKRDERKEEDGIL-----DPDAIAEAYWQLHTQPRSAW 225

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 60/202 (29%), Positives = 84/202 (41%), Gaps = 33/202 (16%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP 100
            KV  +TG   G GRA     ALE G  V  T       +D   TL  L E K  D   P
Sbjct: 3   EKVWFITGASRGFGRAWT-EAALERGDRVVAT------ARDT-ATLADLAE-KYGDRLLP 53

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
           +A+  D+         V+  V  +G++DI+VNNA      G +EE+ E        TN F
Sbjct: 54  LAL--DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYG-LFGMIEEVTESEARAQIDTNFF 110

Query: 161 SHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP----------------EARGLALQLV 202
              ++T+  L ++ E     II  +S+  +   P                EA  LA ++ 
Sbjct: 111 GALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEA--LAQEVA 168

Query: 203 ERGIRVNGVAPGPIWTPLIPSS 224
           E GI+V  V PG   T    +S
Sbjct: 169 EFGIKVTLVEPGGYSTDWAGTS 190

Length = 275

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 60.4 bits (146), Expect = 3e-11
 Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 8/105 (7%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL GKVA+VTGG  GIGR  A   A +GA V  T +        QE+ +   E  T+   
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDID-------QESGQATVEEITNLGG 65

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSV 143
           + + +S D+    + +RV+   +NA+ +ID+L  NA + YK  S+
Sbjct: 66  EALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGL-YKIDSI 109

Length = 169

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 9e-11
 Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 14/149 (9%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            LRGKV  +TGG  GIG A A   A  GA VA   +     K+    L  L      D  
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-LVVGGPLDVT 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           DP + +A L          D V    G ID+LVNNA V    G   +  +    R+   N
Sbjct: 61  DPASFAAFL----------DAVEADLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVN 109

Query: 159 IFSHFFMTRHSLRHMNE-GSA-IINTTSV 185
           ++     ++ +   M   G   ++N  S+
Sbjct: 110 VYGVILGSKLAAPRMVPRGRGHVVNVASL 138

Length = 273

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK ALVTG   GIG   A   A  GA V   Y   Q+   A + +  +  A    +  
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNY--RQKAPRANKVVAEIEAAGGRAS-- 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A+ ADL  +E+   ++D     +G +D LV NA     +G +E   +E      R N 
Sbjct: 60  --AVGADLTDEESVAALMDTAREEFGGLDALVLNA-----SGGMESGMDEDY--AMRLNR 110

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTS 184
            +   + R +L  M  GS ++  TS
Sbjct: 111 DAQRNLARAALPLMPAGSRVVFVTS 135

Length = 248

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 24/196 (12%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K   VTG  SGIGRA A   A +GA +  T      ++DA    + + +A+      P  
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLT------DRDADGLAQTVADARALGGTVPEH 54

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
            + D+   +       ++  A+G +D+++N A +    G+V+ +  E+  R+   N+   
Sbjct: 55  RALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGP 113

Query: 163 FFMTRHSLRHMNE---GSAIINTTSVEPL----WHSPEA------RG----LALQLVERG 205
             +    +  M     G  ++N +S   L    WH+  +      RG    L   L   G
Sbjct: 114 IHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHG 173

Query: 206 IRVNGVAPGPIWTPLI 221
           I V+ V PG + TPL+
Sbjct: 174 IGVSVVVPGAVKTPLV 189

Length = 272

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 52/243 (21%), Positives = 88/243 (36%), Gaps = 64/243 (26%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
            +V G    IG AVA   +  G                    E++   ++S         
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGH-------------------EVITAGRSSGD-----YQ 36

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
            D+  + + K + ++V    G  D +V+ A    +   + E+ +   +R   + +     
Sbjct: 37  VDITDEASIKALFEKV----GHFDAIVSTAGDA-EFAPLAELTDADFQRGLNSKLLGQIN 91

Query: 165 MTRHSLRHMNEGSAIINTT---SVEPLWHSPE--------------ARGLALQLVERGIR 207
           + RH L ++N+G +I  T+   +  P+   P                R  A++L  RGIR
Sbjct: 92  LVRHGLPYLNDGGSITLTSGILAQRPI---PGGAAAATVNGALEGFVRAAAIEL-PRGIR 147

Query: 208 VNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQ 267
           +N V+PG +   L            +G   P        +VA  YV           TGQ
Sbjct: 148 INAVSPGVVEESLE----------AYGDFFPGFEPVPAEDVAKAYVRSV----EGAFTGQ 193

Query: 268 VLH 270
           VLH
Sbjct: 194 VLH 196

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 29/197 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-----EILREAKT 94
           L GK   +TG   GIG A+A   A +GA +      ++       T+     EI  EA  
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEI--EAAG 61

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
             A   + +  D+  ++     V + V  +G IDI VNNA+     G  E+   +R + +
Sbjct: 62  GQA---LPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTG-TEDTPMKRFDLM 117

Query: 155 FRTNIFSHFFMTRHSLRHMNE-GSAIINTTS----VEPLWHSPE-------------ARG 196
            + N+   F +++  L H+ +  +  I T S    ++P W +P                G
Sbjct: 118 QQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLG 177

Query: 197 LALQLVERGIRVNGVAP 213
           LA +  + GI VN + P
Sbjct: 178 LAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 27/198 (13%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR-EAKTSDAKDPM 101
           K   +TG  SGIGR  A  +A  G  V    +           L      A   D  D  
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRA 60

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           A +A L          D      G++D L NNA V  + G  E++     +R+   N+  
Sbjct: 61  AWAAALA---------DFAAATGGRLDALFNNAGVG-RGGPFEDVPLAAHDRMVDINVKG 110

Query: 162 HFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----------ARGL--ALQLVER--G 205
                  +L ++    G+ +INT S   ++  P+           RGL  AL +     G
Sbjct: 111 VLNGAYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHG 170

Query: 206 IRVNGVAPGPIWTPLIPS 223
           IRV  V P  + TP++  
Sbjct: 171 IRVADVWPWFVDTPILTK 188

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.6 bits (142), Expect = 4e-10
 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 17/158 (10%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
            +  L GKVA+VTG  +G+GRA A   A  GATV    V S    DA + L+ +R A   
Sbjct: 6   NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASAL--DASDVLDEIRAA--- 60

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
                +A++ D+        +V       G +DI+VNNA +  +   +  + +E  + V 
Sbjct: 61  -GAKAVAVAGDISQRATADELV-ATAVGLGGLDIVVNNAGIT-RDRMLFNMSDEEWDAVI 117

Query: 156 RTNIFSHFFMTRHSLRHMNEGSA---------IINTTS 184
             ++  HF +TR++  +    +          I+NT+S
Sbjct: 118 AVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSS 155

Length = 306

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 5e-10
 Identities = 61/228 (26%), Positives = 90/228 (39%), Gaps = 44/228 (19%)

Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS-----DAKDP 100
            +TG  SGIGRA A  +A EG  V    +     +     L     A  +     D  D 
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDI----NEAGLAALAAELGAGNAWTGALDVTDR 60

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
            A  A L   +             G++D+L NNA +    G  E+I  E  +RV   N+ 
Sbjct: 61  AAWDAAL--ADFAA-------ATGGRLDVLFNNAGILR-GGPFEDIPLEAHDRVIDINVK 110

Query: 161 SHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA----------RGL--ALQLVER-- 204
                   +L ++    G+ +INT+S   ++  P            RGL  AL L  R  
Sbjct: 111 GVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRH 170

Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAG---QPIEVA 249
           GIRV  V P  + T ++  + +E ++         KR G    P +VA
Sbjct: 171 GIRVADVMPLFVDTAMLDGTSNEVDAGS------TKRLGVRLTPEDVA 212

Length = 260

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 5e-10
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 10/146 (6%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           G+VA+VTG ++G+G   A   A +GA V    V++  +K       I      +D     
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLA-VRNL-DKGKAAAARITAATPGADVT--- 70

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
               DL    + +   D +  AY +ID+L+NNA V Y          +  E  F TN   
Sbjct: 71  LQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTT---ADGFELQFGTNHLG 127

Query: 162 HFFMTRHSLRHM--NEGSAIINTTSV 185
           HF +T   L  +    GS ++  +S 
Sbjct: 128 HFALTGLLLDRLLPVPGSRVVTVSSG 153

Length = 306

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 5e-10
 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 12/149 (8%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L+ K  L+TG   GIG+A+A   A  GA +    V    EK     LE L  A+     
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLL--VGRNAEK-----LEALA-ARLPYPG 53

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               + ADL  +   +  V       G I++L+NNA V      +E+ D E +ER+   N
Sbjct: 54  RHRWVVADLTSEAG-REAVLARAREMGGINVLINNAGVN-HFALLEDQDPEAIERLLALN 111

Query: 159 IFSHFFMTRHSLRHMN--EGSAIINTTSV 185
           + +   +TR  L  +     + ++N  S 
Sbjct: 112 LTAPMQLTRALLPLLRAQPSAMVVNVGST 140

Length = 263

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 57.6 bits (140), Expect = 6e-10
 Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 18/158 (11%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE--EKDAQETLE-ILREAKTSDAK 98
           G  A+VTG   GIG+A A   A  G  V     ++QE  +  A+E  E    E KT    
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNV-ILISRTQEKLDAVAKEIEEKYGVETKT---- 55

Query: 99  DPMAISADLGF-DENCKRVVDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFR 156
               I+AD    D+  +R+  E+      I ILVNN  + +       E  E+ L+ +  
Sbjct: 56  ----IAADFSAGDDIYERIEKELEGL--DIGILVNNVGISHSIPEYFLETPEDELQDIIN 109

Query: 157 TNIFSHFFMTRHSLRHMNEGS--AIINTTSVEPLWHSP 192
            N+ +   MTR  L  M +    AI+N +S   L  +P
Sbjct: 110 VNVMATLKMTRLILPGMVKRKKGAIVNISSFAGLIPTP 147

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 24/198 (12%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
            L+TG  SGIGRA+A  +A  G  VA    ++       + L+ L+    +         
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRT-------DRLDELKAELLNPNPSVEVEI 53

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
            D+  +E  + V+ E+    G +D+++ NA V  K  S+ ++  +       TN+     
Sbjct: 54  LDVTDEERNQLVIAELEAELGGLDLVIINAGV-GKGTSLGDLSFKAFRETIDTNLLGAAA 112

Query: 165 MTRHSLRHMNEGSA--IINTTSVEPLWHSPEA--------------RGLALQLVERGIRV 208
           +   +L          ++  +SV  L   P A                L   + +RGIRV
Sbjct: 113 ILEAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRV 172

Query: 209 NGVAPGPIWTPLIPSSFS 226
             + PG I TPL  + F+
Sbjct: 173 TVINPGFIDTPLTANMFT 190

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 51/262 (19%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTY----VKSQEEKDAQETLEILREAK 93
           + GK  L+ G   +  I   +A      GA +AFTY    +K + E  A E    +  A 
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFV--AG 65

Query: 94  TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEER 150
             D  D  +I A          V + +   +GK+D +V+      K    G   +   + 
Sbjct: 66  HCDVTDEASIDA----------VFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDN 115

Query: 151 LERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT-----SVEPLWH-------SPEA--RG 196
                  +++S   + + + + M +G +I+  T      V P ++       + EA  + 
Sbjct: 116 FTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKY 175

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQFGSEVPMKRAGQPIEV 248
           LA+ L  + IRVN ++ GPI T L  S   +        E +A      P++R     EV
Sbjct: 176 LAVDLGPKNIRVNAISAGPIKT-LAASGIGDFRYILKWNEYNA------PLRRTVTIEEV 228

Query: 249 APCYVFLACNHCSSYITGQVLH 270
               ++L  +  S  +TG+V H
Sbjct: 229 GDSALYL-LSDLSRGVTGEVHH 249

Length = 272

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 66/261 (25%), Positives = 105/261 (40%), Gaps = 47/261 (18%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  +V G      I   +A      GA + FTY   + EK+ +E  + L      + 
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL------EG 58

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER---- 153
           ++ + +  D+  DE      + +    G I  + +  A   K    E++  E LE     
Sbjct: 59  QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANK----EDLRGEFLETSRDG 114

Query: 154 -VFRTNI--FSHFFMTRHSLRHMNEGSAIINTT-----SVEPLWH-------SPEA--RG 196
            +   NI  +S   + R + + M EG +I+  T      V   ++       S EA  + 
Sbjct: 115 FLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKY 174

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIP--SSFSE-----EESAQFGSEVPMKRAGQPIEVA 249
           LA  L + GIRVN ++ GPI T        F+      EE A      P++R     EV 
Sbjct: 175 LANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERA------PLRRTTTQEEVG 228

Query: 250 PCYVFLACNHCSSYITGQVLH 270
               FL  +  S  +TG+ +H
Sbjct: 229 DTAAFLFSD-LSRGVTGENIH 248

Length = 257

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 8/127 (6%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
              L G V ++TG  SGIG+A A  +A  GA +          +D +    +  E +   
Sbjct: 2   MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLA------ARDEEALQAVAEECRALG 55

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
           A + + +  D+   +  K +  +  +  G+ID+ VNN  V    G  EE   E  E+V +
Sbjct: 56  A-EVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVG-AVGRFEETPIEAHEQVIQ 113

Query: 157 TNIFSHF 163
           TN+  + 
Sbjct: 114 TNLIGYM 120

Length = 330

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 21/156 (13%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR-EAKTSDA 97
           + RG+VALVTG   GIG AVA      G  V              + +E L  E +++  
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGC-------ARRVDKIEALAAECQSAGY 55

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK----AGSVEEIDEERLER 153
                   DL  +E    +   +   +  +D+ +NNA +       +G  E   E     
Sbjct: 56  PTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKE----- 110

Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSA----IINTTSV 185
           +F  N+ +    TR + + M E +     IIN  S+
Sbjct: 111 MFDVNVLALSICTREAYQSMKERNVDDGHIININSM 146

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 24/194 (12%)

Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           ++TG  SG+GRA+A  +A EG  +A   V    E+  +ETL++LREA      D      
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADV---NEEGGEETLKLLREA----GGDGFYQRC 56

Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
           D+        +       +G ID++VNNA V    G  EE+  E  +     N+      
Sbjct: 57  DVRDYSQLTALAQACEEKWGGIDVIVNNAGVA-SGGFFEELSLEDWDWQIAINLMGVVKG 115

Query: 166 TRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVN 209
            +  L          I+N  S+  L   P               +  L ++L +  I V+
Sbjct: 116 CKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVH 175

Query: 210 GVAPGPIWTPLIPS 223
            V P    T L+ S
Sbjct: 176 VVCPSFFQTNLLDS 189

Length = 270

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 55.7 bits (134), Expect = 4e-09
 Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKV ++TG +SGIG   A  +AL GA V            A     IL E   +  +   
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVS--RILEEWHKARVE--- 55

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           A++ DL    + +R  +        + +LV NAAV         + E+ LE  F+ N   
Sbjct: 56  AMTLDLASLRSVQRFAEAFKAKNSPLHVLVCNAAV---FALPWTLTEDGLETTFQVNHLG 112

Query: 162 HFFMT 166
           HF++ 
Sbjct: 113 HFYLV 117

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 55.3 bits (133), Expect = 5e-09
 Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 32/251 (12%)

Query: 35  KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT 94
           +P+    G+VALVTG   GIG  +A     EG  V                L+  R +K 
Sbjct: 3   EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLA------------DLDRERGSKV 50

Query: 95  SDAKDPMA--ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGS-VEEIDEERL 151
           + A    A  I+ D+  +      V EV+  +G++D LV NAA+     + +E +     
Sbjct: 51  AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHW 110

Query: 152 ERVFRTNIFSHFFMTRHSLRHMN-EGSAIINTTSVEPLWHSPEAR--------------G 196
            RV   N+     + +H   ++     AI+N  S       P+                 
Sbjct: 111 NRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHA 170

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           LA+ L    IRVN V+PG I         +E  S    ++ P  R G   +VA    +L 
Sbjct: 171 LAISLGPE-IRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLL 229

Query: 257 CNHCSSYITGQ 267
               + ++TGQ
Sbjct: 230 SRQ-AGFVTGQ 239

Length = 255

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 54.8 bits (132), Expect = 6e-09
 Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 38/249 (15%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           + ALVTG   GIG+A+A  +   G  V    +    +  A         A        + 
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRV----LALDIDAAALAAF-----ADALGDARFVP 53

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           ++ DL    +    +       G +D+LV NA    +A S+ +            N+ + 
Sbjct: 54  VACDLTDAASLAAALANAAAERGPVDVLVANAGAA-RAASLHDTTPASWRADNALNLEAA 112

Query: 163 FFMTRHSLRHMNEGS--AIINTTSV-------EPLWHSPEA------RGLALQLVERGIR 207
           +      L  M + S  A++N  SV        P + + +A      + LA++    GIR
Sbjct: 113 YLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIR 172

Query: 208 VNGVAPGPIWTPLI-------PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
            N VAPG + T          P  F  EE  ++    P++    P +VA   +FLA    
Sbjct: 173 ANAVAPGTVKTQAWEARVAANPQVF--EELKKW---YPLQDFATPDDVANAVLFLASPAA 227

Query: 261 SSYITGQVL 269
            + ITG  L
Sbjct: 228 RA-ITGVCL 235

Length = 257

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 55.1 bits (133), Expect = 7e-09
 Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 27/198 (13%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           ++GK  L+ G   +  I   +A     +GA +AFTY+    +K     +E + +   SD 
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKK----RVEPIAQELGSDY 58

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERV 154
              + +S      E+ K + + +    GKID +V++ A   K    GS  E  +E     
Sbjct: 59  VYELDVSKP----EHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIA 114

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQ 200
              +++S   +TR  L  +N+G++++  + +  + + P                R LA+ 
Sbjct: 115 MEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVD 174

Query: 201 LVERGIRVNGVAPGPIWT 218
           L ++GIRVN ++ GPI T
Sbjct: 175 LGKKGIRVNAISAGPIKT 192

Length = 274

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 54.4 bits (131), Expect = 8e-09
 Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 24/154 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           K  G   L+TGG SGIG A+A  +   G TV       + E+   E      E  T    
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIIC---GRNEERLAEAKAENPEIHT---- 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY------KAGSVEEIDEERLE 152
                  D+   ++ + +V+ +   Y  +++L+NNA +Q           +++ ++E   
Sbjct: 55  ----EVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE--- 107

Query: 153 RVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTS 184
               TN+ +   +T   L H+     + IIN +S
Sbjct: 108 --IATNLLAPIRLTALLLPHLLRQPEATIINVSS 139

Length = 245

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 50/234 (21%), Positives = 84/234 (35%), Gaps = 44/234 (18%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            +V LV GG   +G AV   +   G  VA   +   EE DA                  +
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAENEEADAS-----------------I 43

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE-ERLERVFRTNIF 160
            +     F E  K+VV  V    GK+D L+   A  +  GS +     +  + +++ N++
Sbjct: 44  IVLDSDSFTEQAKQVVASVARLSGKVDALI-CVAGGWAGGSAKSKSFVKNWDLMWKQNLW 102

Query: 161 SHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLAL------QLVE----------R 204
           + F  +  + +H+  G  ++ T +   L  +P   G         QL +           
Sbjct: 103 TSFIASHLATKHLLSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPA 162

Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           G   N + P  + TP    +  +   A F S  P         +A   +F A  
Sbjct: 163 GSTANAILPVTLDTPANRKAMPD---ADFSSWTP------LEFIAELILFWASG 207

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 5e-08
 Identities = 54/195 (27%), Positives = 76/195 (38%), Gaps = 37/195 (18%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT--SDAKDP 100
             AL+TG   GIG A+A   A    T+      ++   +    L     A     D  DP
Sbjct: 4   PTALITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAAELP---GATPFPVDLTDP 59

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
            AI+A               V   G++D+LV+NA V    G V E   +        N+ 
Sbjct: 60  EAIAA--------------AVEQLGRLDVLVHNAGVADL-GPVAESTVDEWRATLEVNVV 104

Query: 161 SHFFMTRH---SLRHMNEGSAI-INTTS---VEPLWHSPEA-----RGL--ALQLVERG- 205
           +   +TR    +LR    G  + IN+ +     P W S  A     R L  AL+  E G 
Sbjct: 105 APAELTRLLLPALR-AAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN 163

Query: 206 IRVNGVAPGPIWTPL 220
           +RV  V PG   T +
Sbjct: 164 VRVTSVHPGRTDTDM 178

Length = 227

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
               GKVA++TG  SG G A A   A  G  +    V+       Q+ L+       +  
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ-------QDALDRAVAELRAQG 54

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV 136
            + + +  D+      + + D  +  +G + +L NNA V
Sbjct: 55  AEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGV 93

Length = 287

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 59/256 (23%), Positives = 96/256 (37%), Gaps = 39/256 (15%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GK  L+TG    IG A+       G  V    +  +   +  E+L      K   +K 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLG-----KEFKSKK 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA-GSV-EEIDEERLERVFRT 157
              +  D+   E+ +  + +    YGKID  VN A  + K  G    ++  +        
Sbjct: 57  LSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSL 116

Query: 158 NIFSHFFMTRHSLRHM--NEGSAIINTTSVE----PLWH--------SP-E--------- 193
           ++ S F  ++   ++     G  ++N +S+     P +         SP E         
Sbjct: 117 HLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGII 176

Query: 194 --ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
              + LA    +  IRVN V+PG I     P +F       +      K    P ++   
Sbjct: 177 HLTKYLAKYFKDSNIRVNCVSPGGILDNQ-PEAF----LNAYKKCCNGKGMLDPDDICGT 231

Query: 252 YVFLACNHCSSYITGQ 267
            VFL  +  S YITGQ
Sbjct: 232 LVFLLSDQ-SKYITGQ 246

Length = 256

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 45/200 (22%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE----EKDAQETLEILREAKTSDAK 98
           +  L+TG  SGIG   A     +G  V  T  K ++    E +  E  ++       D  
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQL-------DYA 57

Query: 99  DPMAISADLGFDENCKRVVDEVVN-AYGKIDILVNNAAVQY-KAGSVEEIDEERLERVFR 156
           +P +I+A          +V +V+  + G++D L NN A  Y + G+VE++  E L   F 
Sbjct: 58  EPESIAA----------LVAQVLELSGGRLDALFNNGA--YGQPGAVEDLPTEALRAQFE 105

Query: 157 TNIFSHFFMTRHSLRHMNE-GSA-IINTTSVEPLWHSP-EARG---------------LA 198
            N F    +TR  +  M + G   I+  +S+  L   P + RG               L 
Sbjct: 106 ANFFGWHDLTRRVIPVMRKQGQGRIVQCSSI--LGLVPMKYRGAYNASKFAIEGLSLTLR 163

Query: 199 LQLVERGIRVNGVAPGPIWT 218
           ++L   GI V+ + PGPI T
Sbjct: 164 MELQGSGIHVSLIEPGPIET 183

Length = 277

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 22/199 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK   +TG   GIG+A+A   A +GA V      ++       T+    E   +    
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNA-AVQYKAGSVEEIDEERLERVFRTN 158
            +    D+  ++  +  V++ V  +G IDILVNNA A+        +   +R + +   N
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISL--TGTLDTPMKRYDLMMGVN 118

Query: 159 IFSHFFMTRHSLRHMNEGSA--IINTT---SVEPLWHSPE-------------ARGLALQ 200
               +  ++  L ++ +     I+N +   ++ P W                   G+A +
Sbjct: 119 TRGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLGMAEE 178

Query: 201 LVERGIRVNGVAP-GPIWT 218
               GI VN + P   I T
Sbjct: 179 FKPGGIAVNALWPRTAIAT 197

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 9/100 (9%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV------KSQEEKDAQETLEILREAK 93
           LRGKVALV G   G GR +A      GATV   YV        + E D  ET+E   E  
Sbjct: 6   LRGKVALVAGATRGAGRGIAVELGAAGATV---YVTGRSTRARRSEYDRPETIEETAELV 62

Query: 94  TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNN 133
           T+     +A+  D    E  + +V+ +    G++DILVN+
Sbjct: 63  TAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 49.0 bits (118), Expect = 3e-07
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 6/116 (5%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
              L+TGG  G+GRA+A   A  GA  +      S+   DA     +L E + + A    
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLL---SRSGPDAPGAAALLAELEAAGA-RVT 56

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
            ++ D+   +    V+  +    G +  +++ A V    G +  +  ER   V   
Sbjct: 57  VVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGV-LDDGVLASLTPERFAAVLAP 111

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 32/253 (12%)

Query: 40  LRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LVTG  S   I   +A     EGA +AFTY   Q +K      E   +  +   
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDKLKGRVEEFAAQLGSD-- 58

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
              + +  D+  D +   +  E+   + K D  V++       Q     V  +  E  + 
Sbjct: 59  ---IVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKI 115

Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE-----PLWH-------SPEA--RGLAL 199
               + +S   M +     +N GSA++  + +      P ++       S EA  R +A 
Sbjct: 116 AHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 175

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEES--AQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +   G+RVN ++ GPI T L  S   +     A   +  P++R     +V     FL C
Sbjct: 176 AMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL-C 233

Query: 258 NHCSSYITGQVLH 270
           +  S+ I+G+V+H
Sbjct: 234 SDLSAGISGEVVH 246

Length = 262

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 55/196 (28%), Positives = 79/196 (40%), Gaps = 37/196 (18%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K  L+TG  SGIG   A      G  V     K  +       +  +     +       
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDD-------VARMNSLGFT------G 49

Query: 103 ISADLGFDENCKRVVDEVVN-AYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFRTNIF 160
           I  DL   E+ +R  DEV+     ++  L NNA    Y  G +  I  +++E+ F TN F
Sbjct: 50  ILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVY--GPLSTISRQQMEQQFSTNFF 107

Query: 161 SHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEARG---------------LALQLV 202
               +T   L  M    EG  I+ T+SV  L  +P  RG               L ++L 
Sbjct: 108 GTHQLTMLLLPAMLPHGEGR-IVMTSSVMGLISTP-GRGAYAASKYALEAWSDALRMELR 165

Query: 203 ERGIRVNGVAPGPIWT 218
             GI+V+ + PGPI T
Sbjct: 166 HSGIKVSLIEPGPIRT 181

Length = 256

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 48.4 bits (115), Expect = 8e-07
 Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 32/203 (15%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  K  LVTG   G+G  VA  YA  GATV      ++ +K  ++  + + EA      +
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILV---ARHQKKLEKVYDAIVEA---GHPE 57

Query: 100 PMAISADL--GFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLER--- 153
           P AI  DL    ++  ++    +  A  GK+D +V+ A   Y   ++  +D + +     
Sbjct: 58  PFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFY---ALSPLDFQTVAEWVN 114

Query: 154 VFRTNIFSHFFMTRHS---LRHMNEGSAII----NTTSVEPLWHSPEARGLALQLVER-- 204
            +R N  +   +TR     L+   + S I     +  + +  W    A   AL  + +  
Sbjct: 115 QYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVA 174

Query: 205 --------GIRVNGVAPGPIWTP 219
                    +R N + PGPI +P
Sbjct: 175 ADEWERFGNLRANVLVPGPINSP 197

Length = 239

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 48.7 bits (116), Expect = 9e-07
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           G+  L+TG +SGIG+A A   A  G TV          ++A++ +E       S  ++  
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIE-----TESGNQNIF 55

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
               D+   +     V+E      K+ +L+NNA          E+ E+ LE+ F TN   
Sbjct: 56  LHIVDMSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNK---RELTEDGLEKNFATNTLG 112

Query: 162 HFFMTRH 168
            + +T H
Sbjct: 113 TYILTTH 119

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKTSDAKDP 100
           GK  ++TG ++GIG+  A   A  GA V    +  ++    +E   EI R+    +    
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARV---IMACRDMAKCEEAAAEIRRDTLNHEV--- 54

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
           +    DL   ++ +    E +    ++D+L+NNA V     S     E+  E  F  N  
Sbjct: 55  IVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKT---EDGFEMQFGVNHL 111

Query: 161 SHFFMTRHSLRHM--NEGSAIINTTSV 185
            HF +T   L  +  +  S I+N +S+
Sbjct: 112 GHFLLTNLLLDLLKKSAPSRIVNVSSL 138

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 49/165 (29%), Positives = 67/165 (40%), Gaps = 31/165 (18%)

Query: 23  MEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA 82
           M      T  D      L GK A+VTG   G+G  +A   A  GA V    V+++ + +A
Sbjct: 1   MRKPLDITVPD------LSGKRAVVTGASDGLGLGLARRLAAAGAEVILP-VRNRAKGEA 53

Query: 83  QETLEILREAKTSDAK---DPMAIS-----ADLGFDENCKRVVDEVVNAYGK-IDILVNN 133
              +  +R A   DAK     + +S     A LG          E + A G+ I +L+NN
Sbjct: 54  --AVAAIRTA-VPDAKLSLRALDLSSLASVAALG----------EQLRAEGRPIHLLINN 100

Query: 134 AAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSA 178
           A V          D    E  F TN   HF +T H L  +  G A
Sbjct: 101 AGVMTPPERQTTADG--FELQFGTNHLGHFALTAHLLPLLRAGRA 143

Length = 313

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 35  KPSNKLR--GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           +P+  L+  G  ALVTG   GIG+  A   A +G  +        + KD  ++++  + +
Sbjct: 44  RPAKNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS-KYS 102

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERL 151
           KT      +  S D+  DE  KR+ + +      + +L+NN  V Y  A    E+DEE L
Sbjct: 103 KTQIKTVVVDFSGDI--DEGVKRIKETIEGL--DVGVLINNVGVSYPYARFFHEVDEELL 158

Query: 152 ERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTS 184
           + + + N+     +T+  L  M   +  AIIN  S
Sbjct: 159 KNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS 193

Length = 320

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 29/203 (14%)

Query: 36  PSNKLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAK 93
           P   L GK  LV G   +  I    A  +   GA +A TY     +K A+  +E L  A+
Sbjct: 4   PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTY---LNDK-ARPYVEPL--AE 57

Query: 94  TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEER 150
             DA  P+ +  D+      + V   +   +G++D L+++ A   K    G V +   E 
Sbjct: 58  ELDA--PIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREG 115

Query: 151 LERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS-------VE------PLWHSPEA--R 195
                  +  S   M R +   M  G +++ T S       VE      P+  + E+  R
Sbjct: 116 FALAMDVSCHSFIRMARLAEPLMTNGGSLL-TMSYYGAEKVVENYNLMGPVKAALESSVR 174

Query: 196 GLALQLVERGIRVNGVAPGPIWT 218
            LA +L  +GIRV+ ++PGP+ T
Sbjct: 175 YLAAELGPKGIRVHAISPGPLKT 197

Length = 258

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 49/214 (22%), Positives = 77/214 (35%), Gaps = 36/214 (16%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA-------KTS 95
            V L+TG  SGIG  +A   A + +     Y   ++ K      E               
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
           D  D  +++A           V E       +D+LV NA V    G +E + E+ +  VF
Sbjct: 61  DVCDSKSVAA-------AVERVTE-----RHVDVLVCNAGVGL-LGPLEALSEDAMASVF 107

Query: 156 RTNIFSHFFMTRHSLRHMNEGSA--IINTTSVEPLWHSP------------EA--RGLAL 199
             N+F    M +  L  M    +  I+ T+SV  L   P            E     LA+
Sbjct: 108 DVNVFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAV 167

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF 233
           QL+   + ++ +  GP+ T  +       E    
Sbjct: 168 QLLPFNVHLSLIECGPVHTAFMEKVLGSPEEVLD 201

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 6e-06
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 15/134 (11%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKTSDAKDP 100
            K   +TG  SG GR +       G  VA T  +     D +    + L      D  D 
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVL-QLDVTDS 60

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA-GSVEEIDEERLERVFRTNI 159
            A+          + VVD    A G+ID++V+NA   Y   G+ EE+ + ++ R   TN+
Sbjct: 61  AAV----------RAVVDRAFAALGRIDVVVSNAG--YGLFGAAEELSDAQIRRQIDTNL 108

Query: 160 FSHFFMTRHSLRHM 173
                + R +L H+
Sbjct: 109 IGSIQVIRAALPHL 122

Length = 276

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 22/149 (14%)

Query: 126 KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSA--IINTT 183
           + D++V+NAA+    G + ++   R+ER  R N+     +   +   M        I  +
Sbjct: 31  RRDVVVHNAAIL-DDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILIS 89

Query: 184 SVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE 229
           SV  L+ +P               A+  A +    G+    VA G      +        
Sbjct: 90  SVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGM---AKGPV 146

Query: 230 SAQF--GSEVPMKRAGQPIEVAPCYVFLA 256
           + +   G+     R   P EVA   +   
Sbjct: 147 APEEILGNRRHGVRTMPPEEVARALLNAL 175

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 59/245 (24%), Positives = 90/245 (36%), Gaps = 55/245 (22%)

Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LVTGGD+ +GR +A  +  +G  V     +  + + A + L++  +A   D  DP +   
Sbjct: 4   LVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDV--DAIVCDNTDPAS--- 58

Query: 106 DLGFDENCKRVVDEVVNAYGK-IDILVNNAAVQYKAG-----SVEEIDEERLERVFRTNI 159
                      ++E    +   +D +VN  A  + AG     S+ +             +
Sbjct: 59  -----------LEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNA-LDATV 106

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA----------RGLALQLVERGIRVN 209
            S     +    H+  G +II+     P   S EA           G A     RGI +N
Sbjct: 107 LSAVLTVQSVGDHLRSGGSIISVVPENPPAGSAEAAIKAALSNWTAGQAAVFGTRGITIN 166

Query: 210 GVAPGPIWTPLIPSSFSEEESAQFG----SEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
            VA G               S Q G    S  P   A    E+A   +FL     + +IT
Sbjct: 167 AVACG--------------RSVQPGYDGLSRTPPPVAA---EIARLALFLT-TPAARHIT 208

Query: 266 GQVLH 270
           GQ LH
Sbjct: 209 GQTLH 213

Length = 223

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 67/268 (25%), Positives = 108/268 (40%), Gaps = 61/268 (22%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L+GK  L+TG   +  I   +A     +GA +AFTYV  + E+  ++          ++ 
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKM--------AAEL 55

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              +    D+  D+   +V  ++   +  +D LV++     K         E L   F  
Sbjct: 56  DSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPK---------EALSGDFLD 106

Query: 158 NIFSHFFMTRHSL------------RHMNEG--SAIINTT---SVEPLWH---------S 191
           +I    F T H +            R M  G  SAI+  +   +V  + +         S
Sbjct: 107 SISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKAS 166

Query: 192 PEA--RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG-------SEVPMKRA 242
            EA  R  A  L + GIR NG++ GPI T L  S  ++     FG       +  P++R 
Sbjct: 167 LEAGIRFTAACLGKEGIRCNGISAGPIKT-LAASGIAD-----FGKLLGHVAAHNPLRRN 220

Query: 243 GQPIEVAPCYVFLACNHCSSYITGQVLH 270
               EV     FL  +  SS ITG++ +
Sbjct: 221 VTIEEVGNTAAFLLSD-LSSGITGEITY 247

Length = 261

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 43.7 bits (103), Expect = 5e-05
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
              ++TG  SG+G A A   A  G   V        + + A + + + +++ +       
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYS------- 54

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  DL   ++ ++ VD        +D LV NAAV            +  E     N   
Sbjct: 55  VLHCDLASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLG 114

Query: 162 HFFMTR 167
           HF +T 
Sbjct: 115 HFLLTN 120

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 4/116 (3%)

Query: 41  RGKVALVTGGDSGIGRAVA-HCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
            G V LVTGG  GIGRA+A       GA +     +S    + +   + L   + +    
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLL-GRSPLPPEEEWKAQTLAALE-ALGAR 261

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
            + ISAD+      +R++++V   YG ID +++ A V  +   + +   E  E V 
Sbjct: 262 VLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL-RDALLAQKTAEDFEAVL 316

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.1 bits (101), Expect = 7e-05
 Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 37/253 (14%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS-- 95
           L+GK  L+TG   +  I  A+A      GA + FTY     EK  +   E +     S  
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSEL 65

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLE 152
           D  +P +IS           + D++   +G  D L++  A   K    G   +   E   
Sbjct: 66  DVTNPKSIS----------NLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFH 115

Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGSAIINTT-----SVEPLWH---------SPEARGLA 198
                + +S   ++R +   M++G +I+  T      V P ++             + LA
Sbjct: 116 NSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLA 175

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE---VPMKRAGQPIEVAPCYVFL 255
             + E  IRVN ++ GPI T  + SS   + S    S     P+KR     +V    V+L
Sbjct: 176 NDMGENNIRVNAISAGPIKT--LASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYL 233

Query: 256 ACNHCSSYITGQV 268
                S  +TG++
Sbjct: 234 FSE-LSKGVTGEI 245

Length = 260

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 58/266 (21%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  L+TG   +  I   +A     EGA +AFTYV            +  ++  T  A
Sbjct: 4   LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG-----------DRFKDRITEFA 52

Query: 98  KD---PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
            +    +    D+  DE    +   +   +  +D LV++     +    E I  + L+ +
Sbjct: 53  AEFGSDLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPR----EAIAGDFLDGL 108

Query: 155 FRTN------IFSHFF--MTRHSLRHMNEGSAIINTT-----SVEPLWH-------SPEA 194
            R N      I ++ F  + + +L  +++ ++++  +      V P ++       S EA
Sbjct: 109 SRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKASLEA 168

Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPLIPS---SFSE-----EESAQFGSEVPMKRAGQ 244
             R LA+ L  +GIR NG++ GPI T L  S    F +     E +A      P++R   
Sbjct: 169 SVRYLAVSLGPKGIRANGISAGPIKT-LAASGIKDFGKILDFVESNA------PLRRNVT 221

Query: 245 PIEVAPCYVFLACNHCSSYITGQVLH 270
             EV     FL  +  +S +TG++ H
Sbjct: 222 IEEVGNVAAFLLSD-LASGVTGEITH 246

Length = 260

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 29/198 (14%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  +V G      I    A     +GATV +TY   + +K  Q         K  D 
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ---------KLVDE 55

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERV 154
           +D + +  D+  DE+ +R    +    GKID +V+  A   K    G+V +   +     
Sbjct: 56  EDLL-VECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALA 114

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLALQ 200
              + +S   + +++   +N G++I+              N   +         R LA  
Sbjct: 115 QDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARD 174

Query: 201 LVERGIRVNGVAPGPIWT 218
           L ++GIRVN ++ G + T
Sbjct: 175 LGKKGIRVNAISAGAVKT 192

Length = 252

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 27/198 (13%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           ++GK  L+ G   D  I   +A   A +GA +AFTY   Q E   +  ++ L E+  SD 
Sbjct: 5   MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTY---QGEALGKR-VKPLAESLGSD- 59

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERV 154
                +  D+    +   V + +   +GK+D +V+      K    G   +   E   R 
Sbjct: 60  ---FVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRT 116

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIIN-----TTSVEPLWH-------SPEA--RGLALQ 200
              + FS   + + + + M +G +++      +T V P ++       + EA  R LA  
Sbjct: 117 MVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAAD 176

Query: 201 LVERGIRVNGVAPGPIWT 218
              +GIRVN ++ GP+ T
Sbjct: 177 YGPQGIRVNAISAGPVRT 194

Length = 271

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 39.9 bits (93), Expect = 6e-04
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           G+ A++TGG SGIG A    +A  GA V    V   ++   ++ +  LR A+  D    M
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDV---DKPGLRQAVNHLR-AEGFDVHGVM 61

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV 136
               D+   E    + DE     G +D++ +NA +
Sbjct: 62  ---CDVRHREEVTHLADEAFRLLGHVDVVFSNAGI 93

Length = 275

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 17/128 (13%)

Query: 27  PQFTSH-DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQET 85
           P+F  H D +P        ALV G  SGIG A A   A  G  VA    + ++       
Sbjct: 2   PRFEPHPDRRP--------ALVAGASSGIGAATAIELAAAGFPVALGARRVEK------- 46

Query: 86  LEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE 145
            E L +   +D  + +A   D+   ++ K  V +   A G+I++LV+ A   Y  G + E
Sbjct: 47  CEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTY-FGKLHE 105

Query: 146 IDEERLER 153
           I  E+ E 
Sbjct: 106 ISTEQFES 113

Length = 274

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 7e-04
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LVT    GIG  VA     +GA V  +   S+ E++ ++ L+ L+E     A     + A
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVIS---SRNEENLEKALKELKEYGEVYA-----VKA 55

Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNA 134
           DL   ++ K +V E     G ID LV NA
Sbjct: 56  DLSDKDDLKNLVKEAWELLGGIDALVWNA 84

Length = 259

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 13/121 (10%)

Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
            +TG   G+G A A     +G  V    + ++ +K A +       A          +  
Sbjct: 11  FITGSSDGLGLAAARTLLHQGHEV---VLHARSQKRAADAKAACPGAAG-------VLIG 60

Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
           DL      +++ D+V NA G+ D +++NA +     + +  D   +  +   N+ + + +
Sbjct: 61  DLSSLAETRKLADQV-NAIGRFDAVIHNAGI-LSGPNRKTPDTG-IPAMVAVNVLAPYVL 117

Query: 166 T 166
           T
Sbjct: 118 T 118

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 49/192 (25%), Positives = 71/192 (36%), Gaps = 36/192 (18%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTSDAKDPM 101
           + LVTG  +G G  +   +  +G  V  T  + QE       E  + L  A+  D ++  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATG-RRQERLQELKDELGDNLYIAQL-DVRNRA 59

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           AI          + ++  +   +  ID+LVNNA +        +   E  E +  TN   
Sbjct: 60  AI----------EEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKG 109

Query: 162 HFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEARG----------------LALQLV 202
             +MTR  L  M   N G  IIN  S    W  P A G                L   L 
Sbjct: 110 LVYMTRAVLPGMVERNHGH-IINIGSTAGSW--PYAGGNVYGATKAFVRQFSLNLRTDLH 166

Query: 203 ERGIRVNGVAPG 214
              +RV  + PG
Sbjct: 167 GTAVRVTDIEPG 178

Length = 248

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 46/197 (23%), Positives = 70/197 (35%), Gaps = 69/197 (35%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT-SDAKDPM 101
           KV LVTG +SG+G A+                +   E D    L ++   +    A+   
Sbjct: 2   KVVLVTGANSGLGLAIC--------------ERLLAEDDENPELTLILACRNLQRAEA-- 45

Query: 102 AISADLGFDENCKRVVD----------EVVNA-------YGKIDILVNNAAV-------- 136
           A  A L    + + V D           V  A       Y ++D L  NA +        
Sbjct: 46  ACRALLASHPDARVVFDYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDW 105

Query: 137 ------------------QYK---AGSVEEID---EERLERVFRTNIFSHFFMTR---HS 169
                              YK    G + + D   E+ L  VF+TN+F H+++ R     
Sbjct: 106 IGAIKEVLTNPLFAVTNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPL 165

Query: 170 LRHMNEGSAIINTTSVE 186
           L   + GS II T+S+ 
Sbjct: 166 LCRSDGGSQIIWTSSLN 182

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 195 RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV---PMKRAGQPIEVAPC 251
              A++  ERG R+N ++PG I TPL     +      + +     P  R G P E+A  
Sbjct: 181 MAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAAL 240

Query: 252 YVFLACNHCSSYITG 266
             FL      S+ITG
Sbjct: 241 AEFLMGPR-GSFITG 254

Length = 275

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 37.1 bits (87), Expect = 0.004
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%)

Query: 46  LVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           LVTGG  G+G  +A   A  GA  +         + +A+  L  L             ++
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAE----VTVVA 59

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            D+   +  + ++ E+      +  +++ A V  +   +  +  E   RV  
Sbjct: 60  CDVSDRDAVRALLAEIRADGPPLRGVIHAAGV-LRDALLANMTAEDFARVLA 110

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK12827	249	short chain dehydrogenase; Provisional	99.98
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.98
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07109	334	short chain dehydrogenase; Provisional	99.98
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PLN00015	308	protochlorophyllide reductase	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK06182	273	short chain dehydrogenase; Validated	99.97
PRK05599	246	hypothetical protein; Provisional	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK09134	258	short chain dehydrogenase; Provisional	99.97
PRK07060	245	short chain dehydrogenase; Provisional	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK07832	272	short chain dehydrogenase; Provisional	99.97
PRK08263	275	short chain dehydrogenase; Provisional	99.97
PRK07825	273	short chain dehydrogenase; Provisional	99.97
PRK10538	248	malonic semialdehyde reductase; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK07454	241	short chain dehydrogenase; Provisional	99.97
PRK05855	582	short chain dehydrogenase; Validated	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06180	277	short chain dehydrogenase; Provisional	99.97
PRK05854	313	short chain dehydrogenase; Provisional	99.97
PRK06196	315	oxidoreductase; Provisional	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK05866	293	short chain dehydrogenase; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
KOG1208	314	consensus Dehydrogenases with different specificit	99.97
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.97
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
PRK09135	249	pteridine reductase; Provisional	99.97
PRK09072	263	short chain dehydrogenase; Provisional	99.97
PRK07024	257	short chain dehydrogenase; Provisional	99.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK05650	270	short chain dehydrogenase; Provisional	99.97
PRK05993	277	short chain dehydrogenase; Provisional	99.96
PRK06914	280	short chain dehydrogenase; Provisional	99.96
COG1028	251	FabG Dehydrogenases with different specificities (	99.96
PLN02780	320	ketoreductase/ oxidoreductase	99.96
PRK06194	287	hypothetical protein; Provisional	99.96
PRK07775	274	short chain dehydrogenase; Provisional	99.96
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.96
PRK07578	199	short chain dehydrogenase; Provisional	99.96
PRK06179	270	short chain dehydrogenase; Provisional	99.96
PRK08267	260	short chain dehydrogenase; Provisional	99.96
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.96
PRK06181	263	short chain dehydrogenase; Provisional	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
PRK05693	274	short chain dehydrogenase; Provisional	99.96
PRK06197	306	short chain dehydrogenase; Provisional	99.96
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.96
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08251	248	short chain dehydrogenase; Provisional	99.96
PRK07904	253	short chain dehydrogenase; Provisional	99.96
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.95
PRK07326	237	short chain dehydrogenase; Provisional	99.95
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PRK06101	240	short chain dehydrogenase; Provisional	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.95
PRK07102	243	short chain dehydrogenase; Provisional	99.95
PRK07023	243	short chain dehydrogenase; Provisional	99.95
PRK08177	225	short chain dehydrogenase; Provisional	99.94
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.94
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.93
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.93
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.93
PRK08264	238	short chain dehydrogenase; Validated	99.93
PRK12367	245	short chain dehydrogenase; Provisional	99.93
PRK08017	256	oxidoreductase; Provisional	99.93
PRK09291	257	short chain dehydrogenase; Provisional	99.93
PRK06953	222	short chain dehydrogenase; Provisional	99.92
PRK08219	227	short chain dehydrogenase; Provisional	99.92
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.92
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.88
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.88
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.87
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.86
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.84
PRK06720	169	hypothetical protein; Provisional	99.83
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.82
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.82
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.82
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.81
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.79
PLN02583	297	cinnamoyl-CoA reductase	99.77
PLN02572	442	UDP-sulfoquinovose synthase	99.77
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.77
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.76
PLN02650	351	dihydroflavonol-4-reductase	99.75
PLN02653	340	GDP-mannose 4,6-dehydratase	99.74
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.72
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.7
PLN00198	338	anthocyanidin reductase; Provisional	99.7
PLN02214	342	cinnamoyl-CoA reductase	99.7
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.7
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.68
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.66
PLN02240	352	UDP-glucose 4-epimerase	99.65
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.65
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.65
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.62
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.61
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.6
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.6
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.59
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.59
PLN02686	367	cinnamoyl-CoA reductase	99.59
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.59
PLN02427	386	UDP-apiose/xylose synthase	99.58
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.57
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.52
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.51
CHL00194	317	ycf39 Ycf39; Provisional	99.51
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.51
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.49
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.49
PLN02260	668	probable rhamnose biosynthetic enzyme	99.47
PRK05865	854	hypothetical protein; Provisional	99.46
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.44
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.41
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.4
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.38
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.38
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.37
PRK07201	657	short chain dehydrogenase; Provisional	99.36
PLN02206	442	UDP-glucuronate decarboxylase	99.35
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.35
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.35
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.33
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.33
PLN02996	491	fatty acyl-CoA reductase	99.31
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.27
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.27
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.27
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.26
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.25
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.23
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.23
PRK08309	177	short chain dehydrogenase; Provisional	99.17
PRK12320	699	hypothetical protein; Provisional	99.17
PLN00016	378	RNA-binding protein; Provisional	99.15
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.14
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.14
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.13
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.09
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.08
PLN02503	605	fatty acyl-CoA reductase 2	99.05
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.03
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.02
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.94
PLN02778	298	3,5-epimerase/4-reductase	98.93
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.86
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.85
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
PLN02260	668	probable rhamnose biosynthetic enzyme	98.69
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.68
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.68
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.65
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.65
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.57
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.55
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.54
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.46
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.43
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.27
PRK09620	229	hypothetical protein; Provisional	98.25
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.19
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.14
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.13
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.08
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.08
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.07
COG2910	211	Putative NADH-flavin reductase [General function p	98.02
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.0
PLN00106	323	malate dehydrogenase	97.83
PRK14982	340	acyl-ACP reductase; Provisional	97.82
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.82
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.79
PTZ00325	321	malate dehydrogenase; Provisional	97.69
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.65
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.63
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.57
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.52
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.48
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.45
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.43
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.41
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.39
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.39
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.39
PRK06849	389	hypothetical protein; Provisional	97.39
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.38
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.33
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.33
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.32
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.28
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.27
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.27
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.23
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.21
PRK05086	312	malate dehydrogenase; Provisional	97.19
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.19
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.15
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	97.13
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.06
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.05
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.03
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.03
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.0
KOG2774	366	consensus NAD dependent epimerase [General functio	97.0
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.98
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.96
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.94
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.93
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.92
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.91
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.85
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.84
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.81
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.81
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.78
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.75
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.73
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.71
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.7
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.69
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.68
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.67
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.67
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.65
PRK14968	188	putative methyltransferase; Provisional	96.65
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.64
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.63
COG3268	382	Uncharacterized conserved protein [Function unknow	96.62
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.62
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.61
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.61
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.58
PLN02928	347	oxidoreductase family protein	96.56
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.51
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.51
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.5
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.49
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.48
PLN02740	381	Alcohol dehydrogenase-like	96.48
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.46
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.45
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.45
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.44
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.43
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.42
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	96.36
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.31
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.3
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.29
PLN02494	477	adenosylhomocysteinase	96.27
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.27
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	96.24
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.24
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.24
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.24
PLN02827	378	Alcohol dehydrogenase-like	96.23
PLN00203	519	glutamyl-tRNA reductase	96.22
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.22
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.2
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.2
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.16
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.16
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.13
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.08
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.08
PRK08223	287	hypothetical protein; Validated	96.06
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.04
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.04
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.04
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.03
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.03
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.02
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.0
PRK12480	330	D-lactate dehydrogenase; Provisional	95.97
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.95
PRK09496	453	trkA potassium transporter peripheral membrane com	95.94
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.93
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.92
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.92
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.92
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.9
PRK07574	385	formate dehydrogenase; Provisional	95.88
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.87
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.86
PRK09496	453	trkA potassium transporter peripheral membrane com	95.85
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.83
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.83
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.81
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.81
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.81
PRK05442	326	malate dehydrogenase; Provisional	95.8
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.79
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.79
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.77
PRK07877	722	hypothetical protein; Provisional	95.71
PRK04148	134	hypothetical protein; Provisional	95.7
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	95.69
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.69
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.67
PRK08328	231	hypothetical protein; Provisional	95.65
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.64
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.64
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.63
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.63
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.61
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.59
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.58
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.57
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.55
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.54
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.54
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.54
PRK14851	679	hypothetical protein; Provisional	95.53
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.53
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.53
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.49
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.49
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.48
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.47
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.47
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	95.43
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	95.4
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.39
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	95.39
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.38
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.38
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.37
PTZ00354	334	alcohol dehydrogenase; Provisional	95.35
PRK13243	333	glyoxylate reductase; Reviewed	95.35
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.34
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.29
PRK08655	437	prephenate dehydrogenase; Provisional	95.28
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.27
PLN03139	386	formate dehydrogenase; Provisional	95.27
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.26
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	95.21
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.18
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.16
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.16
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.15
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	95.15
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.13
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.12
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.12
PLN02306	386	hydroxypyruvate reductase	95.1
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.07
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.06
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.06
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	95.05
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.04
PRK06487	317	glycerate dehydrogenase; Provisional	95.04
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.03
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.03
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.02
COG4123	248	Predicted O-methyltransferase [General function pr	95.02
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.02

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=7.2e-42  Score=265.42  Aligned_cols=224  Identities=34%  Similarity=0.465  Sum_probs=195.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+++.|+++||||++|||++++..|++.|++|++.+++....   ++....+.     ...+-..+.||+++..+++.++
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A---~ata~~L~-----g~~~h~aF~~DVS~a~~v~~~l   81 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA---EATAGDLG-----GYGDHSAFSCDVSKAHDVQNTL   81 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH---HHHHhhcC-----CCCccceeeeccCcHHHHHHHH
Confidence            457889999999999999999999999999999999985433   33333221     1246778999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc--cc--CCeEEEecCCCCccCChh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM--NE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~--~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      ++..+.+|.+++||||||+.. ...+-....++|++.+.+|+.|.|.++|++...|  ++  +.+|||+||+.+..+..+
T Consensus        82 ~e~~k~~g~psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G  160 (256)
T KOG1200|consen   82 EEMEKSLGTPSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG  160 (256)
T ss_pred             HHHHHhcCCCcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc
Confidence            999999999999999999954 4667788999999999999999999999998874  22  349999999988777544


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    ++++|+|+++++||||.|.||++.|||. +.++++..++...-+|++|...+||||+.++||+|+.
T Consensus       161 QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT-~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~  239 (256)
T KOG1200|consen  161 QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMT-EAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDA  239 (256)
T ss_pred             chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhh-hhcCHHHHHHHHccCCccccCCHHHHHHHHHHHhccc
Confidence                          7999999999999999999999999998 4567888888899999999999999999999999998


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.|+||+.+.++
T Consensus       240 -ssYiTG~t~evt  251 (256)
T KOG1200|consen  240 -SSYITGTTLEVT  251 (256)
T ss_pred             -cccccceeEEEe
Confidence             999999999775

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.5e-41  Score=287.54  Aligned_cols=227  Identities=23%  Similarity=0.311  Sum_probs=186.9

Q ss_pred             CCCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +..|++|++|||||++  |||+++|++|+++|++|++++|+.+..+.+    +++.+.   .+ ...++++|++|.++++
T Consensus         2 ~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~----~~~~~~---~g-~~~~~~~Dv~d~~~v~   73 (271)
T PRK06505          2 EGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV----KPLAES---LG-SDFVLPCDVEDIASVD   73 (271)
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHH----HHHHHh---cC-CceEEeCCCCCHHHHH
Confidence            4568999999999997  999999999999999999998863322222    222211   12 2357899999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS  191 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~  191 (272)
                      ++++++.+++|++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|+++|+||+++|.++..+.
T Consensus        74 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~  153 (271)
T PRK06505         74 AVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM  153 (271)
T ss_pred             HHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC
Confidence            9999999999999999999998532   1467789999999999999999999999999999878999999998775544


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      +.              +++|+.|++++|||||+|+||+++|++....... ..........|++++.+|+|+|++++||+
T Consensus       154 ~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~  233 (271)
T PRK06505        154 PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLL  233 (271)
T ss_pred             CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHh
Confidence            33              7899999999999999999999999985332121 12223345678899999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|.+|
T Consensus       234 s~~-~~~itG~~i~vd  248 (271)
T PRK06505        234 SDL-SSGVTGEIHFVD  248 (271)
T ss_pred             Ccc-ccccCceEEeec
Confidence            988 889999999987

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.5e-41  Score=283.35  Aligned_cols=226  Identities=24%  Similarity=0.299  Sum_probs=191.3

Q ss_pred             CCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           36 PSNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      |.+.|+||++|||||+  +|||+++|++|+++|++|++++|+.    +..+.++++      ...++.++++|+++++++
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~----~~~~~~~~~------~~~~~~~~~~Dl~~~~~v   70 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND----RMKKSLQKL------VDEEDLLVECDVASDESI   70 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch----HHHHHHHhh------ccCceeEEeCCCCCHHHH
Confidence            3456899999999999  7999999999999999999998862    222223322      123577899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH  190 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~  190 (272)
                      +++++.+.+++|++|+||||||+...   ..++.+.+.++|+..+++|+.++++++++++|+|+++|+||+++|.++..+
T Consensus        71 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~  150 (252)
T PRK06079         71 ERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA  150 (252)
T ss_pred             HHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc
Confidence            99999999999999999999998542   257888999999999999999999999999999988899999999887655


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .+.              +++++.|++++||+||+|+||+|+|++...... ++..+.+....|.++..+|+|||+++.||
T Consensus       151 ~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l  230 (252)
T PRK06079        151 IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFL  230 (252)
T ss_pred             CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHH
Confidence            433              789999999999999999999999998644322 23334455677889999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||+++.+|
T Consensus       231 ~s~~-~~~itG~~i~vd  246 (252)
T PRK06079        231 LSDL-STGVTGDIIYVD  246 (252)
T ss_pred             hCcc-cccccccEEEeC
Confidence            9988 899999999887

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=7.2e-40  Score=284.13  Aligned_cols=253  Identities=42%  Similarity=0.772  Sum_probs=213.7

Q ss_pred             ccCCCCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhh
Q 039897           14 EAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAK   93 (272)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~   93 (272)
                      ...|+....+.|.|......+..+..|++|++|||||++|||++++++|+++|++|++++++... ....+..+.+..  
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~-~~~~~~~~~~~~--  103 (300)
T PRK06128         27 QEAPGTIHEMQPKPDHGEQSYKGFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEE-QDAAEVVQLIQA--  103 (300)
T ss_pred             CCCCCccccCCCCCCCCCcccccccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcch-HHHHHHHHHHHH--
Confidence            46677778888888777777777778999999999999999999999999999999998875432 223333333433  


Q ss_pred             hcCCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc
Q 039897           94 TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM  173 (272)
Q Consensus        94 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  173 (272)
                        .+.++.++.+|+++.++++++++++.+.++++|+||||||......++.+.+.++|++.+++|+.++++++++++|+|
T Consensus       104 --~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  181 (300)
T PRK06128        104 --EGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHL  181 (300)
T ss_pred             --cCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence              455678899999999999999999999999999999999986545678889999999999999999999999999999


Q ss_pred             ccCCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-CCHHHHHhhccCCC
Q 039897          174 NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSEVP  238 (272)
Q Consensus       174 ~~~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~  238 (272)
                      +++++||++||..++.+.+.              +++++.++.++||+||+|+||+++|++.... ...+..+.+....|
T Consensus       182 ~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p  261 (300)
T PRK06128        182 PPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP  261 (300)
T ss_pred             CcCCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC
Confidence            88899999999987765433              6788999999999999999999999986432 23444555666789


Q ss_pred             CCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          239 MKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       239 ~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .++..+|+|+|..++||+++. +.+++|++|++|
T Consensus       262 ~~r~~~p~dva~~~~~l~s~~-~~~~~G~~~~v~  294 (300)
T PRK06128        262 MKRPGQPVEMAPLYVLLASQE-SSYVTGEVFGVT  294 (300)
T ss_pred             CCCCcCHHHHHHHHHHHhCcc-ccCccCcEEeeC
Confidence            999999999999999999987 889999999987

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-40  Score=280.69  Aligned_cols=229  Identities=23%  Similarity=0.327  Sum_probs=189.6

Q ss_pred             CCCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH
Q 039897           35 KPSNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        35 ~~~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      .+..+++||++|||||+  +|||+++|++|+++|++|++++|+.+..+.+.+..+++        ....++++|++++++
T Consensus         3 ~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~   74 (258)
T PRK07533          3 QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--------DAPIFLPLDVREPGQ   74 (258)
T ss_pred             CcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--------ccceEEecCcCCHHH
Confidence            34566899999999998  59999999999999999999999743322233222221        235678999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW  189 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~  189 (272)
                      ++++++++.+++|++|++|||||+...   ..++.+.+.++|++++++|+.+++++++.++|+|+++|+||++||..+..
T Consensus        75 v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~  154 (258)
T PRK07533         75 LEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK  154 (258)
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc
Confidence            999999999999999999999998532   25678899999999999999999999999999998889999999987655


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      +.+.              +++++.|++++||+||+|+||+++|++...... ++..+.+....|.++..+|+|+|+.++|
T Consensus       155 ~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~  234 (258)
T PRK07533        155 VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAF  234 (258)
T ss_pred             CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence            4332              789999999999999999999999998643221 2223344567788999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||+++.+|
T Consensus       235 L~s~~-~~~itG~~i~vd  251 (258)
T PRK07533        235 LASDA-ARRLTGNTLYID  251 (258)
T ss_pred             HhChh-hccccCcEEeeC
Confidence            99987 889999999887

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-40  Score=283.86  Aligned_cols=225  Identities=25%  Similarity=0.352  Sum_probs=184.9

Q ss_pred             CCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .|+||++|||||+  +|||+++|++|+++|++|++++|+.+.    .+.++++.+.   .+.. .++++|++|.++++++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~----~~~~~~~~~~---~~~~-~~~~~Dv~d~~~v~~~   73 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL----KKRVEPIAQE---LGSD-YVYELDVSKPEHFKSL   73 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH----HHHHHHHHHh---cCCc-eEEEecCCCHHHHHHH
Confidence            4689999999997  799999999999999999999987422    2222222221   1223 5789999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+++|++|+||||||+...   ..++.+.+.++|++++++|+.+++++++.++|.|+++|+||++||.++..+.+.
T Consensus        74 ~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~  153 (274)
T PRK08415         74 AESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH  153 (274)
T ss_pred             HHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc
Confidence            99999999999999999998532   257788999999999999999999999999999988899999999877654433


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHH-HHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|++++||+||+|+||+|+|++......... ........|+++..+|+|||+.++||+++
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~  233 (274)
T PRK08415        154 YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSD  233 (274)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhh
Confidence                          789999999999999999999999987532211111 11223456889999999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.++||+++.+|
T Consensus       234 ~-~~~itG~~i~vd  246 (274)
T PRK08415        234 L-SSGVTGEIHYVD  246 (274)
T ss_pred             h-hhcccccEEEEc
Confidence            7 889999999887

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-40  Score=280.08  Aligned_cols=230  Identities=23%  Similarity=0.310  Sum_probs=191.5

Q ss_pred             CCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           36 PSNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      |+.+++||++|||||+  +|||+++|++|+++|++|++++|+.+..+.+++..+++      .+.++.++.+|++|++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~d~~~v   74 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL------EGQESLLLPCDVTSDEEI   74 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc------CCCceEEEecCCCCHHHH
Confidence            3567899999999997  89999999999999999999988644434444333322      245678899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH  190 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~  190 (272)
                      +++++++.+++|++|++|||||+...   ..++.+.+.++|...+++|+.++++++++++|.|+++|+||++||..+..+
T Consensus        75 ~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  154 (257)
T PRK08594         75 TACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV  154 (257)
T ss_pred             HHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC
Confidence            99999999999999999999997532   256778899999999999999999999999999988899999999887655


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .+.              +++++.|++++||+||+|+||+++|++...... ++..+......|.++..+|+|+|+.++||
T Consensus       155 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l  234 (257)
T PRK08594        155 VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFL  234 (257)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHH
Confidence            433              789999999999999999999999997532111 12223344567888999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||+++.+|
T Consensus       235 ~s~~-~~~~tG~~~~~d  250 (257)
T PRK08594        235 FSDL-SRGVTGENIHVD  250 (257)
T ss_pred             cCcc-cccccceEEEEC
Confidence            9998 899999999887

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=283.05  Aligned_cols=226  Identities=30%  Similarity=0.398  Sum_probs=190.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+..+   +.+..+++...   .+.++.++.+|+++++++++++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~i~~~~   77 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEEN---LKKAREKIKSE---SNVDVSYIVADLTKREDLERTV   77 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhh---cCCceEEEEecCCCHHHHHHHH
Confidence            45899999999999999999999999999999999998443   33333333321   2457889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++. .+|++|++|||||... ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||.++..+.+.  
T Consensus        78 ~~~~-~~g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~  155 (263)
T PRK08339         78 KELK-NIGEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIA  155 (263)
T ss_pred             HHHH-hhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcch
Confidence            9985 5899999999999854 467888999999999999999999999999999965  389999999987655443  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----------CHHHHHhhccCCCCCCCCCccchhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                  +++++.|++++|||||+|+||+|+|++.....          .++..+.+....|+++..+|+|+|++
T Consensus       156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~  235 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYL  235 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHH
Confidence                        78999999999999999999999999753210          12333445667899999999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.||+++. +.++||+++.+|
T Consensus       236 v~fL~s~~-~~~itG~~~~vd  255 (263)
T PRK08339        236 VAFLASDL-GSYINGAMIPVD  255 (263)
T ss_pred             HHHHhcch-hcCccCceEEEC
Confidence            99999988 889999999887

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=4.6e-40  Score=266.62  Aligned_cols=212  Identities=29%  Similarity=0.399  Sum_probs=181.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+++|+++|||||+|||.++|+.|++.|++|++++|+   .+++++...++.      ...+..+.+|++|.+++++++
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR---~drL~~la~~~~------~~~~~~~~~DVtD~~~~~~~i   72 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARR---EERLEALADEIG------AGAALALALDVTDRAAVEAAI   72 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecc---HHHHHHHHHhhc------cCceEEEeeccCCHHHHHHHH
Confidence            35778999999999999999999999999999999998   455555555542      267889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +.+.++|+++|+||||||.... .++.+.+.++|+.++++|+.|.++.+++++|.|.+  .|.||++||+++.+++++  
T Consensus        73 ~~~~~~~g~iDiLvNNAGl~~g-~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~  151 (246)
T COG4221          73 EALPEEFGRIDILVNNAGLALG-DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGA  151 (246)
T ss_pred             HHHHHhhCcccEEEecCCCCcC-ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCc
Confidence            9999999999999999999765 89999999999999999999999999999999955  589999999999988877  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                  +..|+.|+..++|||..|+||.+.|+.+.....+...++..+........+|+|||+.+.|.++.+
T Consensus       152 vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         152 VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence                        678889999999999999999997775544333323333333334556679999999999999887

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.8e-40  Score=278.33  Aligned_cols=226  Identities=23%  Similarity=0.301  Sum_probs=186.4

Q ss_pred             CCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..|+||++|||||++  |||+++|+.|+++|++|++++|+..    ..+.++++.+.   .+ ...++++|+++++++++
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~----~~~~~~~l~~~---~g-~~~~~~~Dv~~~~~v~~   75 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV----LEKRVKPLAEE---IG-CNFVSELDVTNPKSISN   75 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH----HHHHHHHHHHh---cC-CceEEEccCCCHHHHHH
Confidence            457899999999997  9999999999999999999987622    22223333221   12 23467899999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      +++.+.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.+++++.|+|+++|+||+++|..+..+.+
T Consensus        76 ~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~  155 (260)
T PRK06603         76 LFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP  155 (260)
T ss_pred             HHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC
Confidence            999999999999999999997532   24677889999999999999999999999999998889999999987665443


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++++.|++++||+||+|+||+++|++...... ++..+.+....|++++.+|+|+|++++||++
T Consensus       156 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s  235 (260)
T PRK06603        156 NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFS  235 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhC
Confidence            3              789999999999999999999999997532211 2233345556789999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|.+|
T Consensus       236 ~~-~~~itG~~i~vd  249 (260)
T PRK06603        236 EL-SKGVTGEIHYVD  249 (260)
T ss_pred             cc-cccCcceEEEeC
Confidence            88 889999999987

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=6.9e-40  Score=278.38  Aligned_cols=229  Identities=26%  Similarity=0.350  Sum_probs=190.3

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+++||++|||||+  +|||+++|++|+++|++|++++++.+. .+..+.++++.+    ...++.++++|+++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~v~~   76 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEK-GRFEKKVRELTE----PLNPSLFLPCDVQDDAQIEE   76 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCccc-chHHHHHHHHHh----ccCcceEeecCcCCHHHHHH
Confidence            35789999999986  899999999999999999998875432 223344444433    23346788999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      +++.+.+++|++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|.|+++|+||++||..+..+.+
T Consensus        77 ~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~  156 (258)
T PRK07370         77 TFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIP  156 (258)
T ss_pred             HHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCc
Confidence            999999999999999999998532   25788889999999999999999999999999998889999999988765544


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++|+.|++++||+||+|+||+++|++...... ++..+......|+++..+|+|+++.+.||++
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s  236 (258)
T PRK07370        157 NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLS  236 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhC
Confidence            3              789999999999999999999999997633211 2223344456788999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||+++.+|
T Consensus       237 ~~-~~~~tG~~i~vd  250 (258)
T PRK07370        237 DL-ASGITGQTIYVD  250 (258)
T ss_pred             hh-hccccCcEEEEC
Confidence            88 899999999887

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-39  Score=276.15  Aligned_cols=226  Identities=23%  Similarity=0.341  Sum_probs=183.7

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGG--DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGa--s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..|++|++|||||  ++|||+++|++|+++|++|+++++..+..+.+.+    +.+.   .+ ...++++|+++++++++
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~---~~-~~~~~~~Dv~d~~~v~~   73 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITE----FAAE---FG-SDLVFPCDVASDEQIDA   73 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHH----HHHh---cC-CcceeeccCCCHHHHHH
Confidence            3478999999996  6799999999999999999998775333333322    2211   12 23568999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCC---CC-cccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKA---GS-VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS  191 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~---~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~  191 (272)
                      +++.+.+.+|++|++|||||+....   .+ +.+.+.++|++.+++|+.++++++++++|+|+++|+||++||.++..+.
T Consensus        74 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~  153 (260)
T PRK06997         74 LFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV  153 (260)
T ss_pred             HHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC
Confidence            9999999999999999999985321   12 4567899999999999999999999999999878999999998776554


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      +.              +++++.|++++||+||+|+||+++|++...... .+..+.+....|+++..+|+||++.++||+
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~  233 (260)
T PRK06997        154 PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLL  233 (260)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHh
Confidence            33              789999999999999999999999987543211 222233445678899999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|.+|
T Consensus       234 s~~-~~~itG~~i~vd  248 (260)
T PRK06997        234 SDL-ASGVTGEITHVD  248 (260)
T ss_pred             Ccc-ccCcceeEEEEc
Confidence            988 889999999987

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-39  Score=276.24  Aligned_cols=226  Identities=24%  Similarity=0.341  Sum_probs=184.8

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGG--DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGa--s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..|+||++|||||  ++|||+++|+.|+++|++|++++|+.+.    .+.++++..    .......+++|+++++++++
T Consensus         2 ~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~----~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~   73 (261)
T PRK08690          2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL----EERVRKMAA----ELDSELVFRCDVASDDEINQ   73 (261)
T ss_pred             CccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH----HHHHHHHHh----ccCCceEEECCCCCHHHHHH
Confidence            3488999999997  6799999999999999999999875322    222333322    22335678999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCC---CC-cccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKA---GS-VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWH  190 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~---~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~  190 (272)
                      +++++.++++++|+||||||+....   .+ +++.+.++|+.++++|+.+++++++++.|.|++ +|+||++||..+..+
T Consensus        74 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~  153 (261)
T PRK08690         74 VFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA  153 (261)
T ss_pred             HHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC
Confidence            9999999999999999999985421   12 456788999999999999999999999999865 489999999877655


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .+.              ++.++.|++++|||||+|+||+++|++...... .+..+.+.+..|++++.+|+|||+++.||
T Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l  233 (261)
T PRK08690        154 IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFL  233 (261)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Confidence            443              689999999999999999999999998644322 23333445667899999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|.+|
T Consensus       234 ~s~~-~~~~tG~~i~vd  249 (261)
T PRK08690        234 LSDL-SSGITGEITYVD  249 (261)
T ss_pred             hCcc-cCCcceeEEEEc
Confidence            9988 889999999887

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=9e-39  Score=276.42  Aligned_cols=252  Identities=41%  Similarity=0.686  Sum_probs=201.9

Q ss_pred             cCCCCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhh
Q 039897           15 AQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT   94 (272)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~   94 (272)
                      ..|+...++.|.+......+....++++|++|||||++|||++++++|+++|++|++++++... +...+..+.+.+   
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~-~~~~~~~~~~~~---   97 (294)
T PRK07985         22 PTPGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE-EDAQDVKKIIEE---   97 (294)
T ss_pred             cccCcccccCCcccccccccccCCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcch-hhHHHHHHHHHH---
Confidence            3344444454444333233333456899999999999999999999999999999998775322 222222222322   


Q ss_pred             cCCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc
Q 039897           95 SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN  174 (272)
Q Consensus        95 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  174 (272)
                       .+.++.++.+|+++++++.++++++.+.++++|++|||||......++.+.+.++|++++++|+.+++++++++.|+|+
T Consensus        98 -~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  176 (294)
T PRK07985         98 -CGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLP  176 (294)
T ss_pred             -cCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh
Confidence             3556788999999999999999999999999999999999754446788899999999999999999999999999998


Q ss_pred             cCCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-CCHHHHHhhccCCCC
Q 039897          175 EGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSEVPM  239 (272)
Q Consensus       175 ~~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~  239 (272)
                      ++++||++||.++..+.+.              +++++.|++++||+||+|+||+|+|++.... ..++..+.+....|+
T Consensus       177 ~~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  256 (294)
T PRK07985        177 KGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM  256 (294)
T ss_pred             cCCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC
Confidence            8899999999887665443              6889999999999999999999999985322 223334456667888


Q ss_pred             CCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          240 KRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++..+|+|||++++||+++. +.++||++|.+|
T Consensus       257 ~r~~~pedva~~~~fL~s~~-~~~itG~~i~vd  288 (294)
T PRK07985        257 KRAGQPAELAPVYVYLASQE-SSYVTAEVHGVC  288 (294)
T ss_pred             CCCCCHHHHHHHHHhhhChh-cCCccccEEeeC
Confidence            99999999999999999988 899999999987

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-39  Score=272.40  Aligned_cols=224  Identities=28%  Similarity=0.393  Sum_probs=188.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+..  +...   +.+.+    .+.++.++.+|+++++++++++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~---~~~~~----~~~~~~~~~~Dl~~~~~~~~~~   74 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQ---AQVEA----LGRKFHFITADLIQQKDIDSIV   74 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHH---HHHHH----cCCeEEEEEeCCCCHHHHHHHH
Confidence            4588999999999999999999999999999999987531  2222   22222    3567888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++++.|.|++   +|+||++||..+..+.+. 
T Consensus        75 ~~~~~~~g~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~  153 (251)
T PRK12481         75 SQAVEVMGHIDILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV  153 (251)
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC
Confidence            999999999999999999854 467888999999999999999999999999999854   479999999876654332 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   +++++.|++++||+||+|+||+++|++...... ++..+......|.++..+|+|+|+++.||+++.
T Consensus       154 ~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~  233 (251)
T PRK12481        154 PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence                         789999999999999999999999998754322 222334456788999999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|.+|
T Consensus       234 -~~~~~G~~i~vd  245 (251)
T PRK12481        234 -SDYVTGYTLAVD  245 (251)
T ss_pred             -ccCcCCceEEEC
Confidence             889999999887

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-39  Score=274.90  Aligned_cols=226  Identities=23%  Similarity=0.295  Sum_probs=184.9

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..|++|++|||||+  +|||+++|+.|+++|++|++++|+.+..+.    ++++.+.   . .....+++|+++++++++
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~----~~~l~~~---~-~~~~~~~~Dl~~~~~v~~   77 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKR----VEPLAAE---L-GAFVAGHCDVTDEASIDA   77 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHH----HHHHHHh---c-CCceEEecCCCCHHHHHH
Confidence            45789999999997  899999999999999999999875322222    2333221   1 235578999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.+++++++++.|+|+++|+||+++|.++..+.+
T Consensus        78 ~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p  157 (272)
T PRK08159         78 VFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMP  157 (272)
T ss_pred             HHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCC
Confidence            999999999999999999998542   25678889999999999999999999999999998889999999987655443


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++++.|++++||+||+|+||+++|++...... ...........|+++..+|+|+|+.++||++
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s  237 (272)
T PRK08159        158 HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLS  237 (272)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhC
Confidence            3              789999999999999999999999987532211 1111222235788899999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|.+|
T Consensus       238 ~~-~~~itG~~i~vd  251 (272)
T PRK08159        238 DL-SRGVTGEVHHVD  251 (272)
T ss_pred             cc-ccCccceEEEEC
Confidence            88 889999999987

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-39  Score=271.99  Aligned_cols=229  Identities=31%  Similarity=0.451  Sum_probs=190.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++.+.  ..+.++.++.+|+++++++.++
T Consensus         2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~---~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~   76 (260)
T PRK07063          2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL---AERAAAAIARD--VAGARVLAVPADVTDAASVAAA   76 (260)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhc--cCCceEEEEEccCCCHHHHHHH
Confidence            456899999999999999999999999999999999997443   33333343321  0245678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        77 ~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (260)
T PRK07063         77 VAAAEEAFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGC  155 (260)
T ss_pred             HHHHHHHhCCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCc
Confidence            9999999999999999999854 355667889999999999999999999999999965  479999999877655443 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----CHH-HHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----SEE-ESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                   +++++.|++++||+||+|+||+++|++.....    ..+ .........|++++.+|+|+|+.++||
T Consensus       156 ~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl  235 (260)
T PRK07063        156 FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFL  235 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence                         78999999999999999999999999864321    111 223445667899999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|.+|
T Consensus       236 ~s~~-~~~itG~~i~vd  251 (260)
T PRK07063        236 ASDE-APFINATCITID  251 (260)
T ss_pred             cCcc-ccccCCcEEEEC
Confidence            9988 889999999987

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=269.46  Aligned_cols=224  Identities=29%  Similarity=0.455  Sum_probs=188.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+...   +++..+++..    .+.++.++.+|+++++++++++
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~   77 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA---LEKLADEIGT----SGGKVVPVCCDVSQHQQVTSML   77 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHH
Confidence            45889999999999999999999999999999999997443   3444444433    3456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCC---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHS---  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~---  191 (272)
                      +++.+.++++|+||||||... ..++.+.+.++|++++++|+.+++++++++.|.|.+   +++|+++||.++....   
T Consensus        78 ~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  156 (253)
T PRK05867         78 DQVTAELGGIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQ  156 (253)
T ss_pred             HHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCC
Confidence            999999999999999999854 467788899999999999999999999999999854   3689999997653211   


Q ss_pred             ----hh---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          192 ----PE---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       192 ----~~---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                          +.         +++++.|++++||+||+|+||+++|++....  .+..+.+....|.+++.+|+|||++++||+++
T Consensus       157 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~  234 (253)
T PRK05867        157 QVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY--TEYQPLWEPKIPLGRLGRPEELAGLYLYLASE  234 (253)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence                11         7899999999999999999999999987432  22233445567889999999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.++||++|.+|
T Consensus       235 ~-~~~~tG~~i~vd  247 (253)
T PRK05867        235 A-SSYMTGSDIVID  247 (253)
T ss_pred             c-cCCcCCCeEEEC
Confidence            8 899999999987

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-38  Score=269.92  Aligned_cols=225  Identities=24%  Similarity=0.331  Sum_probs=184.3

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+.    ++.+..+++..    ....+.++.+|++++++++++
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~----~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~   74 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND----KLKGRVEEFAA----QLGSDIVLPCDVAEDASIDAM   74 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch----hHHHHHHHHHh----ccCCceEeecCCCCHHHHHHH
Confidence            37899999999986  999999999999999999998862    23333444432    223467889999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKA----GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      ++++.+.+|++|+||||||+....    .++.+.+.++|+.++++|+.+++.+++.+.|+|+++|+||++||.++..+.+
T Consensus        75 ~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~  154 (262)
T PRK07984         75 FAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP  154 (262)
T ss_pred             HHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCC
Confidence            999999999999999999985321    1256678999999999999999999999999887789999999987655443


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++++.|++++|||||+|+||+++|++...... .+..+......|.++...|+||++.++||++
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s  234 (262)
T PRK07984        155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS  234 (262)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcC
Confidence            3              789999999999999999999999987432111 1222334456788999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|.+|
T Consensus       235 ~~-~~~itG~~i~vd  248 (262)
T PRK07984        235 DL-SAGISGEVVHVD  248 (262)
T ss_pred             cc-cccccCcEEEEC
Confidence            87 889999999887

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.4e-38  Score=270.01  Aligned_cols=232  Identities=35%  Similarity=0.518  Sum_probs=189.2

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +.+.|.||+++|||+++|||+++|++|++.|++|++++|+.+..+..   ..++..... .+.++..+.||+++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~   77 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEET---AQELGGLGY-TGGKVLAIVCDVSKEVDVEK   77 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCC-CCCeeEEEECcCCCHHHHHH
Confidence            35679999999999999999999999999999999999985544333   333332211 25668899999999999999


Q ss_pred             HHHHHHHh-cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHH-HHHHHHHHHhcccc--CCeEEEecCCCCccCC
Q 039897          116 VVDEVVNA-YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS-HFFMTRHSLRHMNE--GSAIINTTSVEPLWHS  191 (272)
Q Consensus       116 ~~~~~~~~-~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~-~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~  191 (272)
                      ++++..++ +|++|+||||||......++.+.+.++|++++++|+.| .+.+.+.+.+++++  +|.|+++||..+..+.
T Consensus        78 l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~  157 (270)
T KOG0725|consen   78 LVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG  157 (270)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC
Confidence            99999999 79999999999997655589999999999999999995 56666666677655  5789999998766441


Q ss_pred             -----hh----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----HHHHHh--hccCCCCCCCCCccchhh
Q 039897          192 -----PE----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----EEESAQ--FGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       192 -----~~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~dva~  250 (272)
                           .+          +|++|.||+++|||||+|+||.+.|++......    .+..+.  .....|.++...|+|+++
T Consensus       158 ~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~  237 (270)
T KOG0725|consen  158 PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAE  237 (270)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHH
Confidence                 11          799999999999999999999999998322222    122222  445678999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .+.||++++ +.|+||+.|.+|
T Consensus       238 ~~~fla~~~-asyitG~~i~vd  258 (270)
T KOG0725|consen  238 AAAFLASDD-ASYITGQTIIVD  258 (270)
T ss_pred             hHHhhcCcc-cccccCCEEEEe
Confidence            999999998 559999999887

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.3e-38  Score=274.79  Aligned_cols=234  Identities=24%  Similarity=0.240  Sum_probs=183.8

Q ss_pred             CCCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHH--HHhhhcC----CCCceEEeccC-
Q 039897           37 SNKLRGKVALVTGG--DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL--REAKTSD----AKDPMAISADL-  107 (272)
Q Consensus        37 ~~~l~~k~vlVtGa--s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~D~-  107 (272)
                      .++|+||++||||+  ++|||+++|+.|+++|++|++ +|+....+.+...+..-  .+.....    ......+.+|+ 
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            35599999999999  899999999999999999998 67644444433222210  0000001    11246788898 


Q ss_pred             -CC------------------hHHHHHHHHHHHHhcCCccEEEEcccccC-CCCCcccCCHHHHHHHHHhhhHHHHHHHH
Q 039897          108 -GF------------------DENCKRVVDEVVNAYGKIDILVNNAAVQY-KAGSVEEIDEERLERVFRTNIFSHFFMTR  167 (272)
Q Consensus       108 -~~------------------~~~~~~~~~~~~~~~g~ld~vI~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  167 (272)
                       ++                  +++++++++++.+.+|++|+||||||+.. ...++.+.+.++|+++|++|+.+++++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             33                  34899999999999999999999998643 23688999999999999999999999999


Q ss_pred             HHHhccccCCeEEEecCCCCccCChh---------------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCC-CHHHH
Q 039897          168 HSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSF-SEEES  230 (272)
Q Consensus       168 ~~~~~~~~~g~iv~vsS~~~~~~~~~---------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~-~~~~~  230 (272)
                      +++|.|+++|+||++||.++..+.+.               +++|+.|+++ +|||||+|+||+++|++..... .++..
T Consensus       163 ~~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~  242 (303)
T PLN02730        163 HFGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMI  242 (303)
T ss_pred             HHHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHH
Confidence            99999988899999999876543321               7899999986 7999999999999999875421 12333


Q ss_pred             HhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          231 AQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       231 ~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +......|+.++.+|+|+++.++||+++. +.++||+++.+|
T Consensus       243 ~~~~~~~pl~r~~~peevA~~~~fLaS~~-a~~itG~~l~vd  283 (303)
T PLN02730        243 EYSYANAPLQKELTADEVGNAAAFLASPL-ASAITGATIYVD  283 (303)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCcc-ccCccCCEEEEC
Confidence            33344567788999999999999999988 889999999886

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-38  Score=267.11  Aligned_cols=227  Identities=30%  Similarity=0.444  Sum_probs=191.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||+++|++|+++|++|++++|+...  .+.+..+++..    .+.++.++.+|+++++++.+++
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~--~~~~~~~~l~~----~~~~~~~~~~D~~~~~~i~~~~   77 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDD--GLAETAEHIEA----AGRRAIQIAADVTSKADLRAAV   77 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999999999999999987432  23333344433    3557888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++++++.|++  .++||++||.++..+.+.  
T Consensus        78 ~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  156 (254)
T PRK06114         78 ARTEAELGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLL  156 (254)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCC
Confidence            999999999999999999854 367888999999999999999999999999999855  479999999876543221  


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|+.++||+||+|+||+++|++.......+..+.+....|+++..+|+|+++.++||+++.
T Consensus       157 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        157 QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence                          688999999999999999999999998643222233344556788999999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|.+|
T Consensus       237 -~~~~tG~~i~~d  248 (254)
T PRK06114        237 -ASFCTGVDLLVD  248 (254)
T ss_pred             -ccCcCCceEEEC
Confidence             899999999987

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-38  Score=267.68  Aligned_cols=228  Identities=25%  Similarity=0.254  Sum_probs=184.5

Q ss_pred             CCCCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           36 PSNKLRGKVALVTGG--DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        36 ~~~~l~~k~vlVtGa--s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      |+.++++|+++|||+  ++|||++++++|+++|++|++++|+.. .+.+.+..++       ...++.++.+|+++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~i   72 (256)
T PRK07889          1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA-LRLTERIAKR-------LPEPAPVLELDVTNEEHL   72 (256)
T ss_pred             CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc-hhHHHHHHHh-------cCCCCcEEeCCCCCHHHH
Confidence            356789999999999  899999999999999999999988632 1222222221       123577899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCC---CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc-
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW-  189 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~-  189 (272)
                      +++++++.+.++++|+||||||+....   .++.+.+.++|++++++|+.+++++++.++|+|+++|+||++++..... 
T Consensus        73 ~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~  152 (256)
T PRK07889         73 ASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAW  152 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccC
Confidence            999999999999999999999985321   3577889999999999999999999999999998889999998653221 


Q ss_pred             -CCh--h---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCC-CCCCccchhhhhhhh
Q 039897          190 -HSP--E---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMK-RAGQPIEVAPCYVFL  255 (272)
Q Consensus       190 -~~~--~---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~dva~~~~~L  255 (272)
                       .+.  .         +++++.|++++||+||+|+||+++|++...... .+..+.+....|++ ++.+|+|+|+.++||
T Consensus       153 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l  232 (256)
T PRK07889        153 PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVAL  232 (256)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHH
Confidence             110  1         789999999999999999999999998643322 22233445567777 588999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||+++.+|
T Consensus       233 ~s~~-~~~~tG~~i~vd  248 (256)
T PRK07889        233 LSDW-FPATTGEIVHVD  248 (256)
T ss_pred             hCcc-cccccceEEEEc
Confidence            9988 889999999887

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-38  Score=265.26  Aligned_cols=227  Identities=32%  Similarity=0.438  Sum_probs=190.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++++|++|||||++|||.+++++|+++|++|++++|+..+.   .+..+++.+    .+.++.++.+|+++++++++++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   74 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAEL---DQLVAEIRA----EGGEAVALAGDVRDEAYAKALV   74 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHH
Confidence            467899999999999999999999999999999999985443   333334433    3557888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCc-cCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL-WHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~-~~~~~-  193 (272)
                      +++.++++++|+||||||+.....++.+.+.++|++++++|+.+++++++.++|.|++  .++||++||..+. .+.+. 
T Consensus        75 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~  154 (254)
T PRK07478         75 ALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGM  154 (254)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCc
Confidence            9999999999999999998654567888999999999999999999999999999865  4789999998665 22222 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   +++++.|+.++||+||+|+||+++|++...... ++.........|.+++.+|+|+|+.++||+++.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence                         788999999999999999999999998654322 222333445567888999999999999999987


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|.+|
T Consensus       235 -~~~~~G~~~~~d  246 (254)
T PRK07478        235 -ASFVTGTALLVD  246 (254)
T ss_pred             -hcCCCCCeEEeC
Confidence             889999999887

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=6e-38  Score=268.46  Aligned_cols=226  Identities=33%  Similarity=0.507  Sum_probs=188.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+ ..   +.+..+++.+    .+.++.++.+|+++++++++++
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~---~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~   73 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA---VSETVDKIKS----NGGKAKAYHVDISDEQQVKDFA   73 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH---HHHHHHHHHh----cCCeEEEEEeecCCHHHHHHHH
Confidence            35789999999999999999999999999999999987 33   3333444433    3557889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~---  193 (272)
                      +++.+.++++|+||||||+.....++.+.+.+.|++++++|+.+++++++.++|+|++ +|+||++||.++..+.+.   
T Consensus        74 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  153 (272)
T PRK08589         74 SEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSG  153 (272)
T ss_pred             HHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCch
Confidence            9999999999999999998644457788899999999999999999999999999965 589999999887655433   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--H-H----HHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--E-E----ESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~-~----~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                 +++++.|+.++||+||+|+||+|+|++......  + .    .........|.+++.+|+|+++.++||
T Consensus       154 Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  233 (272)
T PRK08589        154 YNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFL  233 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHH
Confidence                       789999999999999999999999998643221  1 1    111222356888899999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. ..+++|++|.+|
T Consensus       234 ~s~~-~~~~~G~~i~vd  249 (272)
T PRK08589        234 ASDD-SSFITGETIRID  249 (272)
T ss_pred             cCch-hcCcCCCEEEEC
Confidence            9987 889999999886

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=266.02  Aligned_cols=254  Identities=54%  Similarity=0.871  Sum_probs=215.3

Q ss_pred             ccccCCCCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHH
Q 039897           12 KQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE   91 (272)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~   91 (272)
                      -+--+|+-...|.|.|+..........++++|++|||||++|||.+++++|+++|++|++++|+...  ........+..
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~--~~~~~~~~~~~   93 (290)
T PRK06701         16 HQNKQPGIESLMNPLPQFEAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHE--DANETKQRVEK   93 (290)
T ss_pred             hhccCcChhhhCCcccCCCccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHHh
Confidence            4556788889999999988877777789999999999999999999999999999999999987532  12222233322


Q ss_pred             hhhcCCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHh
Q 039897           92 AKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLR  171 (272)
Q Consensus        92 ~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  171 (272)
                          .+.++.++.+|+++.++++++++++.+.++++|+||||||......++.+.+.++|.+.+++|+.+++++++++++
T Consensus        94 ----~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~  169 (290)
T PRK06701         94 ----EGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALP  169 (290)
T ss_pred             ----cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                3567888999999999999999999999999999999999865456788899999999999999999999999999


Q ss_pred             ccccCCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCC
Q 039897          172 HMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV  237 (272)
Q Consensus       172 ~~~~~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~  237 (272)
                      +|++.++||++||..+..+.+.              +++++.++.++||+|++|+||+++|++......++....+....
T Consensus       170 ~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~  249 (290)
T PRK06701        170 HLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNT  249 (290)
T ss_pred             HHhhCCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcC
Confidence            9987889999999877655433              67888999889999999999999999876544444445555667


Q ss_pred             CCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          238 PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       238 ~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.+++.+++|+|++++||+++. +.+++|++|.+|
T Consensus       250 ~~~~~~~~~dva~~~~~ll~~~-~~~~~G~~i~id  283 (290)
T PRK06701        250 PMQRPGQPEELAPAYVFLASPD-SSYITGQMLHVN  283 (290)
T ss_pred             CcCCCcCHHHHHHHHHHHcCcc-cCCccCcEEEeC
Confidence            8888999999999999999988 889999999887

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-37  Score=265.20  Aligned_cols=229  Identities=28%  Similarity=0.366  Sum_probs=189.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+++||++|||||++|||++++++|+++|++|++++|+..+   +.+..+++.+..  .+.++.++.+|++++++++++
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~   77 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEER---LASAEARLREKF--PGARLLAARCDVLDEADVAAF   77 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHHHHhhC--CCceEEEEEecCCCHHHHHHH
Confidence            346889999999999999999999999999999999998544   333333333211  234678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||... ..++.+.+.++|.+.+++|+.+++++++.++|.|++  .|+||++||..+..+.+. 
T Consensus        78 ~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  156 (265)
T PRK07062         78 AAAVEARFGGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHM  156 (265)
T ss_pred             HHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCc
Confidence            9999999999999999999854 467888999999999999999999999999999976  489999999887665443 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC---------HHHHHh--hccCCCCCCCCCccchh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS---------EEESAQ--FGSEVPMKRAGQPIEVA  249 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~---------~~~~~~--~~~~~~~~~~~~~~dva  249 (272)
                                   +++++.|+.++||+||+|+||+++|++....+.         .+..+.  ....+|++++.+|+|+|
T Consensus       157 ~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va  236 (265)
T PRK07062        157 VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAA  236 (265)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHH
Confidence                         688999999999999999999999998643211         111111  13467889999999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.++||+++. +.++||++|.+|
T Consensus       237 ~~~~~L~s~~-~~~~tG~~i~vd  258 (265)
T PRK07062        237 RALFFLASPL-SSYTTGSHIDVS  258 (265)
T ss_pred             HHHHHHhCch-hcccccceEEEc
Confidence            9999999987 889999999987

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-37  Score=262.47  Aligned_cols=230  Identities=26%  Similarity=0.421  Sum_probs=189.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.+|++|++|||||++|||+++++.|+++|++|++++++.  .+.+.....++..   ..+.++.++.+|++++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~   77 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSN--VEEANKIAEDLEQ---KYGIKAKAYPLNILEPETYKEL   77 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHH---hcCCceEEEEcCCCCHHHHHHH
Confidence            4678999999999999999999999999999999987643  2333333333332   1345788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccC-----CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQY-----KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW  189 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~-----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~  189 (272)
                      ++++.+.++++|+||||||+..     ...++.+.+.++|.+.+++|+.+++.+++.++|.|++  .++||++||..+..
T Consensus        78 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  157 (260)
T PRK08416         78 FKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV  157 (260)
T ss_pred             HHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc
Confidence            9999999999999999998742     1346778889999999999999999999999999975  47999999987654


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      +.+.              +++++.|+.++||+||+|+||+++|++...... ++..+......|.+++.+|+|+++.++|
T Consensus       158 ~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~  237 (260)
T PRK08416        158 YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLF  237 (260)
T ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            4432              789999999999999999999999998643322 2333344556788899999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.+++|+.+.+|
T Consensus       238 l~~~~-~~~~~G~~i~vd  254 (260)
T PRK08416        238 LCSEK-ASWLTGQTIVVD  254 (260)
T ss_pred             HcChh-hhcccCcEEEEc
Confidence            99987 889999999887

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-37  Score=258.60  Aligned_cols=226  Identities=27%  Similarity=0.413  Sum_probs=191.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+..   .+.+..+++..    .+.++..+.+|+++++++++++
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~---~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~   77 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAE---RAELAVAKLRQ----EGIKAHAAPFNVTHKQEVEAAI   77 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHH---HHHHHHHHHHh----cCCeEEEEecCCCCHHHHHHHH
Confidence            4588999999999999999999999999999999999743   34444444443    3456778899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +.+.+.++++|+||||+|... ..++.+.+.++|++.+++|+.+++++++++.+.|++  .++||++||..+..+.+.  
T Consensus        78 ~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  156 (254)
T PRK08085         78 EHIEKDIGPIDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTIT  156 (254)
T ss_pred             HHHHHhcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCc
Confidence            999999999999999999853 467888999999999999999999999999999854  479999999876544332  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  +++++.|++++||+||+|+||+++|++...... ++..+......|++++.+|+|+++.+.||+++. 
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~-  235 (254)
T PRK08085        157 PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKA-  235 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-
Confidence                        789999999999999999999999998754322 233345556788999999999999999999988 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++||+++.+|
T Consensus       236 ~~~i~G~~i~~d  247 (254)
T PRK08085        236 SDFVNGHLLFVD  247 (254)
T ss_pred             ccCCcCCEEEEC
Confidence            899999999887

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-37  Score=264.37  Aligned_cols=222  Identities=29%  Similarity=0.399  Sum_probs=183.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc------chhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS------QEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      .+++|++|||||++|||++++++|+++|++|++++++.      +..+.+.+..+++..    .+.++.++.+|++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~Dv~~~~~   78 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA----AGGEAVANGDDIADWDG   78 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHh----cCCceEEEeCCCCCHHH
Confidence            57899999999999999999999999999999998864      112444555555543    35567889999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeEEEecC
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAIINTTS  184 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~iv~vsS  184 (272)
                      +.++++.+.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++        .|+||++||
T Consensus        79 v~~~~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS  157 (286)
T PRK07791         79 AANLVDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS  157 (286)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCc
Confidence            99999999999999999999999854 367888999999999999999999999999999854        269999999


Q ss_pred             CCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCC--CCCCccch
Q 039897          185 VEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMK--RAGQPIEV  248 (272)
Q Consensus       185 ~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dv  248 (272)
                      .++..+.++              +++++.|++++||+||+|+|| +.|++.....     .......+.+  +..+|+|+
T Consensus       158 ~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~-----~~~~~~~~~~~~~~~~pedv  231 (286)
T PRK07791        158 GAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF-----AEMMAKPEEGEFDAMAPENV  231 (286)
T ss_pred             hhhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH-----HHHHhcCcccccCCCCHHHH
Confidence            887665543              789999999999999999999 7888753211     1111222332  35689999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |++++||+++. +.++||++|.+|
T Consensus       232 a~~~~~L~s~~-~~~itG~~i~vd  254 (286)
T PRK07791        232 SPLVVWLGSAE-SRDVTGKVFEVE  254 (286)
T ss_pred             HHHHHHHhCch-hcCCCCcEEEEc
Confidence            99999999987 889999999887

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.2e-38  Score=268.04  Aligned_cols=215  Identities=39%  Similarity=0.606  Sum_probs=186.0

Q ss_pred             cCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc-C
Q 039897           49 GGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY-G  125 (272)
Q Consensus        49 Gas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g  125 (272)
                      |++  +|||+++|++|+++|++|++++|+.+   .+.+.++++.+.   .+  ..++.+|++++++++++++++.+.+ |
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~---~~~~~~~~l~~~---~~--~~~~~~D~~~~~~v~~~~~~~~~~~~g   72 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEE---KLADALEELAKE---YG--AEVIQCDLSDEESVEALFDEAVERFGG   72 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHH---HHHHHHHHHHHH---TT--SEEEESCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHHHHH---cC--CceEeecCcchHHHHHHHHHHHhhcCC
Confidence            566  99999999999999999999999854   334444444432   23  2359999999999999999999999 9


Q ss_pred             CccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          126 KIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       126 ~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                      ++|+||||+|....   ..++.+.+.++|++.+++|+.+++.+++++.|+|+++|+||+++|..+..+.+.         
T Consensus        73 ~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKa  152 (241)
T PF13561_consen   73 RIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKA  152 (241)
T ss_dssp             SESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHH
T ss_pred             CeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHH
Confidence            99999999998654   478889999999999999999999999999999999999999999877666554         


Q ss_pred             -----HHHHHHHHhh-CCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccc
Q 039897          194 -----ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG  266 (272)
Q Consensus       194 -----~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG  266 (272)
                           ++++|.||++ +|||||+|+||++.|++..... .++..+.+.+..|++++.+|+|||++++||+|+. +.++||
T Consensus       153 al~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~-a~~itG  231 (241)
T PF13561_consen  153 ALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDA-ASYITG  231 (241)
T ss_dssp             HHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGG-GTTGTS
T ss_pred             HHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCcc-ccCccC
Confidence                 7999999999 9999999999999999753321 2455667788999999999999999999999998 999999


Q ss_pred             eeeccC
Q 039897          267 QVLHPN  272 (272)
Q Consensus       267 ~~i~id  272 (272)
                      |+|.+|
T Consensus       232 ~~i~vD  237 (241)
T PF13561_consen  232 QVIPVD  237 (241)
T ss_dssp             EEEEES
T ss_pred             CeEEEC
Confidence            999998

...

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-37  Score=258.12  Aligned_cols=225  Identities=33%  Similarity=0.489  Sum_probs=183.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +++|++|||||++|||++++++|+++|++|++++++.  .+.+.+...++..    .+.++..+.+|+++.+++..++++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   75 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR--KEEAEETVYEIQS----NGGSAFSIGANLESLHGVEALYSS   75 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCC--HHHHHHHHHHHHh----cCCceEEEecccCCHHHHHHHHHH
Confidence            5789999999999999999999999999999876432  2233333344432    355677889999999999999998


Q ss_pred             HHHh----cC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh
Q 039897          120 VVNA----YG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       120 ~~~~----~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~  193 (272)
                      +.+.    ++  ++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|.|++.|+||++||.++..+.+.
T Consensus        76 ~~~~~~~~~g~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (252)
T PRK12747         76 LDNELQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD  154 (252)
T ss_pred             HHHHhhhhcCCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC
Confidence            8763    34  799999999985 3457788899999999999999999999999999988899999999988765443


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhh-ccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF-GSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|+.++||+||+|+||+|+|++......++....+ ....+.+++.+|+|+|+++.||+++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  234 (252)
T PRK12747        155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASP  234 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCc
Confidence                          6899999999999999999999999986543322222222 2234678899999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.++||++|.+|
T Consensus       235 ~-~~~~~G~~i~vd  247 (252)
T PRK12747        235 D-SRWVTGQLIDVS  247 (252)
T ss_pred             c-ccCcCCcEEEec
Confidence            7 889999999887

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.6e-36  Score=256.98  Aligned_cols=225  Identities=30%  Similarity=0.420  Sum_probs=187.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|+||++||||+++|||.+++++|+++|++|+++++...  +.   ..+.+.+    .+.++.++++|+++.++++++
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~---~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~   75 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TE---TIEQVTA----LGRRFLSLTADLRKIDGIPAL   75 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HH---HHHHHHh----cCCeEEEEECCCCCHHHHHHH
Confidence            34689999999999999999999999999999998876521  12   2222322    345678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+.++++|++|||||+.. ..++.+.+.++|++.+++|+.+++++++++.|.|++   +|+||++||..+..+.+.
T Consensus        76 ~~~~~~~~~~~D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (253)
T PRK08993         76 LERAVAEFGHIDILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR  154 (253)
T ss_pred             HHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC
Confidence            9999999999999999999854 456788899999999999999999999999999854   378999999876655432


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|+.++||+||+|+||+++|++......+ .....+.+..|.+++.+|+|+|+.++||+++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~  234 (253)
T PRK08993        155 VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASS  234 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence                          7889999999999999999999999987543222 2223345677889999999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.+++|+++.+|
T Consensus       235 ~-~~~~~G~~~~~d  247 (253)
T PRK08993        235 A-SDYINGYTIAVD  247 (253)
T ss_pred             c-ccCccCcEEEEC
Confidence            8 899999999887

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-37  Score=265.73  Aligned_cols=230  Identities=26%  Similarity=0.337  Sum_probs=180.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch-------hhhHHHHHHHHHHhhhcCCCCceEEeccCCC
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE-------EKDAQETLEILREAKTSDAKDPMAISADLGF  109 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (272)
                      +.+|+||++|||||++|||+++|+.|+++|++|++++|+...       .+.+....+++..    .+.++.++++|+++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~Dv~~   78 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA----AGGRGIAVQVDHLV   78 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh----cCCceEEEEcCCCC
Confidence            466899999999999999999999999999999999997432       2233334444432    35567889999999


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEEcc-cccC---CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEec
Q 039897          110 DENCKRVVDEVVNAYGKIDILVNNA-AVQY---KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTT  183 (272)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ld~vI~~a-g~~~---~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vs  183 (272)
                      +++++++++++.+.+|++|+||||| |...   ...++.+.+.++|.+++++|+.++++++++++|+|++  +|+||++|
T Consensus        79 ~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~is  158 (305)
T PRK08303         79 PEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEIT  158 (305)
T ss_pred             HHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEEC
Confidence            9999999999999999999999999 7521   1256778889999999999999999999999999964  48999999


Q ss_pred             CCCCcc---C---C--hh---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--CHHHHHhhccCCC-CCCCC
Q 039897          184 SVEPLW---H---S--PE---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--SEEESAQFGSEVP-MKRAG  243 (272)
Q Consensus       184 S~~~~~---~---~--~~---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~-~~~~~  243 (272)
                      |..+..   +   .  +.         +++|+.|++++|||||+|+||+++|++.....  .++.........| .++..
T Consensus       159 S~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (305)
T PRK08303        159 DGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISE  238 (305)
T ss_pred             CccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCC
Confidence            965422   1   1  11         78999999999999999999999999753211  1111111122345 46677


Q ss_pred             CccchhhhhhhhhccCCCCcccceeec
Q 039897          244 QPIEVAPCYVFLACNHCSSYITGQVLH  270 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~~~~~~tG~~i~  270 (272)
                      +|+|+|.+++||+++....++||++|.
T Consensus       239 ~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        239 TPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             CHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            999999999999998623589999985

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=255.89  Aligned_cols=228  Identities=31%  Similarity=0.515  Sum_probs=192.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ++.+++|++|||||++|||.+++++|+++|++|++++|+.+..+   +..+++.+    .+.++.++.+|+++.+++.++
T Consensus         2 ~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~   74 (253)
T PRK06172          2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGE---ETVALIRE----AGGEALFVACDVTRDAEVKAL   74 (253)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHHHHHh----cCCceEEEEcCCCCHHHHHHH
Confidence            45688999999999999999999999999999999999854433   33333333    356788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|++|||+|......++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        75 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~  154 (253)
T PRK06172         75 VEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKM  154 (253)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC
Confidence            99999999999999999998654456788899999999999999999999999999854  479999999876655443 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--CHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                   +++++.++.++||+||+|+||+++|++.....  .++..+.+....|..+..+|+|+++.++||+++
T Consensus       155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~  234 (253)
T PRK06172        155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSD  234 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCc
Confidence                         68889999999999999999999999875432  233334455677888999999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..+++|++|.+|
T Consensus       235 ~-~~~~~G~~i~~d  247 (253)
T PRK06172        235 G-ASFTTGHALMVD  247 (253)
T ss_pred             c-ccCcCCcEEEEC
Confidence            8 889999999987

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-37  Score=259.71  Aligned_cols=224  Identities=31%  Similarity=0.439  Sum_probs=183.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +.+++|++|||||++|||++++++|+++|++|++++|+...   +.+..++       ...++.++++|+++++++++++
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~   71 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEK---LASLRQR-------FGDHVLVVEGDVTSYADNQRAV   71 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------hCCcceEEEccCCCHHHHHHHH
Confidence            44789999999999999999999999999999999997433   2222221       2346788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHH----HHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCCh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER----LERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~----~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~  192 (272)
                      +++.+.++++|+||||||+.....++.+.+.++    |++++++|+.+++.++++++|.|++ +|+||+++|.++..+.+
T Consensus        72 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  151 (263)
T PRK06200         72 DQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG  151 (263)
T ss_pred             HHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC
Confidence            999999999999999999854344566666665    8999999999999999999999854 68999999987765543


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----------CHHHHHhhccCCCCCCCCCccch
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dv  248 (272)
                      +              +++++.|+++. |+||+|+||+++|++.....          .++..+.+....|+++..+|+|+
T Consensus       152 ~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ev  230 (263)
T PRK06200        152 GGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDH  230 (263)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHH
Confidence            2              68899999885 99999999999999853210          11223445667899999999999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++++||+++.++.++||++|.+|
T Consensus       231 a~~~~fl~s~~~~~~itG~~i~vd  254 (263)
T PRK06200        231 TGPYVLLASRRNSRALTGVVINAD  254 (263)
T ss_pred             hhhhhheecccccCcccceEEEEc
Confidence            999999998754779999999987

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=257.92  Aligned_cols=222  Identities=29%  Similarity=0.433  Sum_probs=183.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+....   .+...+       .+.++.++.+|+++++++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~   71 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNG---AAVAAS-------LGERARFIATDITDDAAIERAV   71 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHH-------hCCeeEEEEecCCCHHHHHHHH
Confidence            457899999999999999999999999999999999974332   222222       2346788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc-cCCeEEEecCCCCccCChh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN-EGSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~g~iv~vsS~~~~~~~~~---  193 (272)
                      +.+.+.++++|+||||||.... ..+ +.+.++|++.+++|+.++++++++++|.|+ +.++||++||.++..+.+.   
T Consensus        72 ~~~~~~~g~id~lv~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~  149 (261)
T PRK08265         72 ATVVARFGRVDILVNLACTYLD-DGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWL  149 (261)
T ss_pred             HHHHHHhCCCCEEEECCCCCCC-CcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCch
Confidence            9999999999999999998542 233 568899999999999999999999999984 4689999999877665443   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHHHHhh-ccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEESAQF-GSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                 +++++.|+.++||+||+|+||+++|++......  .+..+.. ....|++++.+|+|+|++++||+++.
T Consensus       150 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        150 YPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCcc
Confidence                       688999999999999999999999998643221  1111222 23468889999999999999999987


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|.+|
T Consensus       230 -~~~~tG~~i~vd  241 (261)
T PRK08265        230 -ASFVTGADYAVD  241 (261)
T ss_pred             -ccCccCcEEEEC
Confidence             889999999987

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=256.71  Aligned_cols=225  Identities=28%  Similarity=0.432  Sum_probs=189.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||.+++++|+++|++|++++|+ ++.+.+.+.+   .+    .+.++.++.+|+++.+++++++
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~---~~----~~~~~~~~~~D~~~~~~i~~~~   82 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLI---EK----EGRKVTFVQVDLTKPESAEKVV   82 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH---Hh----cCCceEEEEcCCCCHHHHHHHH
Confidence            45889999999999999999999999999999999987 3333333322   22    3456889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|++|||+|... ..++.+.+.++|++.+++|+.++++++++++|+|++  .++||++||..+..+.+.  
T Consensus        83 ~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  161 (258)
T PRK06935         83 KEALEEFGKIDILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVP  161 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCch
Confidence            999999999999999999854 367788899999999999999999999999999965  479999999876644332  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  +++++.|+.++||+||+|+||+++|++...... +...+......|.++..+|+|+++.+.||+++. 
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-  240 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRA-  240 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh-
Confidence                        689999999999999999999999998643222 222334455678899999999999999999988 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++||++|.+|
T Consensus       241 ~~~~~G~~i~~d  252 (258)
T PRK06935        241 SDYVNGHILAVD  252 (258)
T ss_pred             hcCCCCCEEEEC
Confidence            889999999987

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-36  Score=257.51  Aligned_cols=220  Identities=25%  Similarity=0.282  Sum_probs=183.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      ++|||||++|||++++++|+++|++|++++|+..   .+.+..+++.+     ..++.++++|++++++++++++++.+.
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~-----~~~~~~~~~Dv~d~~~~~~~~~~~~~~   73 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEE---NLEKALKELKE-----YGEVYAVKADLSDKDDLKNLVKEAWEL   73 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHHHh-----cCCceEEEcCCCCHHHHHHHHHHHHHh
Confidence            7999999999999999999999999999999743   34444444432     236788999999999999999999999


Q ss_pred             cCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc-c--CCeEEEecCCCCccCChh------
Q 039897          124 YGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN-E--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~--~g~iv~vsS~~~~~~~~~------  193 (272)
                      ++++|+||||||.... ..++.+.+.++|.+.+++|+.+++++++.++|.|. +  .|+||++||.++..+.+.      
T Consensus        74 ~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  153 (259)
T PRK08340         74 LGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADV  153 (259)
T ss_pred             cCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHH
Confidence            9999999999997531 24577888999999999999999999999999874 2  589999999987665443      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---------C-HH-HHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---------S-EE-ESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---------~-~~-~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                              +++++.|++++||+||+|+||+++|++.....         . ++ ..+.+....|+++..+|+|||++++|
T Consensus       154 sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~f  233 (259)
T PRK08340        154 TRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAF  233 (259)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHH
Confidence                    78999999999999999999999999864211         1 11 12334567789999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|.+|
T Consensus       234 L~s~~-~~~itG~~i~vd  250 (259)
T PRK08340        234 LLSEN-AEYMLGSTIVFD  250 (259)
T ss_pred             HcCcc-cccccCceEeec
Confidence            99998 899999999887

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=3.6e-36  Score=258.08  Aligned_cols=227  Identities=30%  Similarity=0.429  Sum_probs=189.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|+++||||++|||++++++|+++|++|++++|+...   ..+..+++.+    .+.++.++++|+++++++.+++
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~   78 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK---AEAVVAEIKA----AGGEALAVKADVLDKESLEQAR   78 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999997433   3333344432    3456888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCC--------------CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEE
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKA--------------GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIIN  181 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~--------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~  181 (272)
                      +++.+.++++|+||||||.....              .++.+.+.++|++.+++|+.+++++++++++.|++  .++||+
T Consensus        79 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~  158 (278)
T PRK08277         79 QQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIIN  158 (278)
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            99999999999999999964321              34677889999999999999999999999999864  489999


Q ss_pred             ecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC------HHHHHhhccCCCCCC
Q 039897          182 TTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS------EEESAQFGSEVPMKR  241 (272)
Q Consensus       182 vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~  241 (272)
                      +||..+..+.+.              +++++.|+.++||+||+|+||+++|++......      .+..+.+....|+++
T Consensus       159 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  238 (278)
T PRK08277        159 ISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGR  238 (278)
T ss_pred             EccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccC
Confidence            999987765433              789999999999999999999999997533211      122334556788999


Q ss_pred             CCCccchhhhhhhhhcc-CCCCcccceeeccC
Q 039897          242 AGQPIEVAPCYVFLACN-HCSSYITGQVLHPN  272 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~-~~~~~~tG~~i~id  272 (272)
                      +.+|+|+|++++||+++ . +.++||++|.+|
T Consensus       239 ~~~~~dva~~~~~l~s~~~-~~~~tG~~i~vd  269 (278)
T PRK08277        239 FGKPEELLGTLLWLADEKA-SSFVTGVVLPVD  269 (278)
T ss_pred             CCCHHHHHHHHHHHcCccc-cCCcCCCEEEEC
Confidence            99999999999999998 6 889999999987

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.9e-37  Score=263.22  Aligned_cols=235  Identities=23%  Similarity=0.285  Sum_probs=176.3

Q ss_pred             CCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHH--HHHhhh-cCCC-----CceEEec
Q 039897           36 PSNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI--LREAKT-SDAK-----DPMAISA  105 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~--~~~~~~-~~~~-----~~~~~~~  105 (272)
                      ++.+++||++||||++  +|||+++|+.|+++|++|++.++.+ ......+..+.  ...... ..+.     ++..+.+
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            3567899999999996  9999999999999999999987541 01111000000  000000 0000     1111222


Q ss_pred             cCCC------------------hHHHHHHHHHHHHhcCCccEEEEcccccC-CCCCcccCCHHHHHHHHHhhhHHHHHHH
Q 039897          106 DLGF------------------DENCKRVVDEVVNAYGKIDILVNNAAVQY-KAGSVEEIDEERLERVFRTNIFSHFFMT  166 (272)
Q Consensus       106 D~~~------------------~~~~~~~~~~~~~~~g~ld~vI~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~  166 (272)
                      |+++                  +++++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.++++++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            3322                  24689999999999999999999999743 2468889999999999999999999999


Q ss_pred             HHHHhccccCCeEEEecCCCCccCChh---------------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCC-CHHH
Q 039897          167 RHSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSF-SEEE  229 (272)
Q Consensus       167 ~~~~~~~~~~g~iv~vsS~~~~~~~~~---------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~-~~~~  229 (272)
                      ++++|+|+++|+||+++|..+..+.+.               +++++.|+++ +|||||+|+||++.|++..... .++.
T Consensus       161 ~a~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~  240 (299)
T PRK06300        161 SHFGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERM  240 (299)
T ss_pred             HHHHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHH
Confidence            999999988899999998776543321               6899999987 5999999999999999864321 1233


Q ss_pred             HHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          230 SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .+.+....|+++..+|+|+++.++||+++. +.++||+++.+|
T Consensus       241 ~~~~~~~~p~~r~~~peevA~~v~~L~s~~-~~~itG~~i~vd  282 (299)
T PRK06300        241 VDYYQDWAPLPEPMEAEQVGAAAAFLVSPL-ASAITGETLYVD  282 (299)
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-ccCCCCCEEEEC
Confidence            334445678889999999999999999988 889999999887

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=254.26  Aligned_cols=228  Identities=32%  Similarity=0.439  Sum_probs=190.4

Q ss_pred             CCCCCcEEEEEcCCC-chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDS-GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~-gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+++|++|||||+| |||+++++.|+++|++|++++|+...   +.+..+++.+..  ...++.++++|++++++++++
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~   87 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERR---LGETADELAAEL--GLGRVEAVVCDVTSEAQVDAL   87 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHHhc--CCceEEEEEccCCCHHHHHHH
Confidence            447789999999985 99999999999999999999987443   333333333210  124678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+.++++|+||||+|... ..++.+.+.++|++.+++|+.+++++++.++|.|++   .++|++++|..+..+.+.
T Consensus        88 ~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~  166 (262)
T PRK07831         88 IDAAVERLGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG  166 (262)
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC
Confidence            9999999999999999999854 467888999999999999999999999999999864   478999999876544332


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|++++||+||+|+||++.|++......++..+.+....++++..+|+|+|+.++||+++.
T Consensus       167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence                          789999999999999999999999998755444555555566778899999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|.+|
T Consensus       247 -~~~itG~~i~v~  258 (262)
T PRK07831        247 -SSYLTGEVVSVS  258 (262)
T ss_pred             -hcCcCCceEEeC
Confidence             889999999987

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.7e-36  Score=252.55  Aligned_cols=210  Identities=28%  Similarity=0.345  Sum_probs=179.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..++++++||||||+|||.++|++|+++|++|+++.|+.+..+.+++   ++.+.   .+.++.++.+|+++++++.++.
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~---~l~~~---~~v~v~vi~~DLs~~~~~~~l~   75 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAK---ELEDK---TGVEVEVIPADLSDPEALERLE   75 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH---HHHHh---hCceEEEEECcCCChhHHHHHH
Confidence            34788999999999999999999999999999999999555555544   44332   4677899999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+..+.+|+||||||+.. .+++.+.++++.+++|++|+.++..|+++++|.|.+  .|.||+++|.+++.+.|.  
T Consensus        76 ~~l~~~~~~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~a  154 (265)
T COG0300          76 DELKERGGPIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMA  154 (265)
T ss_pred             HHHHhcCCcccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchH
Confidence            999999889999999999954 589999999999999999999999999999999966  589999999999988776  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                  +.+|+.|+.++||+|.+++||+|.|++....     ........+.....+|+++|+..++.+...
T Consensus       155 vY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-----~~~~~~~~~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         155 VYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-----GSDVYLLSPGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-----ccccccccchhhccCHHHHHHHHHHHHhcC
Confidence                        6899999999999999999999999998511     111222234556779999999999988765

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.6e-36  Score=279.48  Aligned_cols=223  Identities=30%  Similarity=0.469  Sum_probs=190.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+.||++|||||++|||+++|++|+++|++|++++|+...   +.+..++       .+.+...+.+|++|+++++++++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~  335 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEG---AKKLAEA-------LGDEHLSVQADITDEAAVESAFA  335 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------hCCceeEEEccCCCHHHHHHHHH
Confidence            4689999999999999999999999999999999997433   3222222       23456788999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                      ++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|+++|+||++||.++..+.+.     
T Consensus       336 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  415 (520)
T PRK06484        336 QIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYC  415 (520)
T ss_pred             HHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhH
Confidence            999999999999999998644467888999999999999999999999999999977799999999987766543     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                               +++++.|+.++||+||+|+||+|+|++......  ....+.+.+..|++++.+|+|+|+.++||+++. +.
T Consensus       416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~-~~  494 (520)
T PRK06484        416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPA-AS  494 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-cc
Confidence                     789999999999999999999999998643221  223344556778889999999999999999987 88


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      ++||++|.+|
T Consensus       495 ~~~G~~i~vd  504 (520)
T PRK06484        495 YVNGATLTVD  504 (520)
T ss_pred             CccCcEEEEC
Confidence            9999999887

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-36  Score=252.31  Aligned_cols=227  Identities=30%  Similarity=0.435  Sum_probs=191.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++++|++|||||++|||.+++++|+++|++|++++|+...   +....+++.+    .+.+..++++|+++.+++++++
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   76 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG---CQAVADAIVA----AGGKAEALACHIGEMEQIDALF   76 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHH
Confidence            56899999999999999999999999999999999997443   3333344432    3456778999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||......++.+.+.++|++.+++|+.++++++++++|+|++  .++|+++||..+..+.+.  
T Consensus        77 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  156 (252)
T PRK07035         77 AHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQG  156 (252)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCc
Confidence            9999999999999999997544467788899999999999999999999999999865  489999999876554332  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  +++++.|+.++||+||+|+||+++|++...... .+..+......|.++..+|+|+|+.++||+++. 
T Consensus       157 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-  235 (252)
T PRK07035        157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDA-  235 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCcc-
Confidence                        688899999999999999999999998754332 233444556678889999999999999999998 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|+++.+|
T Consensus       236 ~~~~~g~~~~~d  247 (252)
T PRK07035        236 SSYTTGECLNVD  247 (252)
T ss_pred             ccCccCCEEEeC
Confidence            889999999987

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=5.7e-36  Score=254.31  Aligned_cols=214  Identities=34%  Similarity=0.539  Sum_probs=182.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+...                  ..++.++.+|+++++++++++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~------------------~~~~~~~~~D~~~~~~i~~~~   63 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------------------YNDVDYFKVDVSNKEQVIKGI   63 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc------------------cCceEEEEccCCCHHHHHHHH
Confidence            36889999999999999999999999999999999987432                  124678999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.+.  
T Consensus        64 ~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  142 (258)
T PRK06398         64 DYVISKYGRIDILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAA  142 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCc
Confidence            999999999999999999853 468889999999999999999999999999999954  589999999877655433  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC------CHH----HHHhhccCCCCCCCCCccchhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF------SEE----ESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                  +++++.|+.+. |+||+|+||+++|++.....      .++    ....+....|+++..+|+|+|++
T Consensus       143 ~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~  221 (258)
T PRK06398        143 AYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYV  221 (258)
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHH
Confidence                        68889998876 99999999999999864321      111    11233455788899999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++||+++. ..+++|+++.+|
T Consensus       222 ~~~l~s~~-~~~~~G~~i~~d  241 (258)
T PRK06398        222 VAFLASDL-ASFITGECVTVD  241 (258)
T ss_pred             HHHHcCcc-cCCCCCcEEEEC
Confidence            99999987 889999999887

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=251.80  Aligned_cols=226  Identities=33%  Similarity=0.481  Sum_probs=191.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+++||++|||||+++||++++++|+++|++|++++|+...   +.+..+.+.+    .+.++.++.+|+++++++++++
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~i~~----~~~~~~~~~~D~~~~~~~~~~~   78 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAK---LAAAAESLKG----QGLSAHALAFDVTDHDAVRAAI   78 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHh----cCceEEEEEccCCCHHHHHHHH
Confidence            45889999999999999999999999999999999997433   3333444433    3456888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +.+.+.++++|+||||+|... ..++.+.+.++|++++++|+.+++++++++.+.|++  .++||++||..+..+.+.  
T Consensus        79 ~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  157 (255)
T PRK07523         79 DAFEAEIGPIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIA  157 (255)
T ss_pred             HHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCc
Confidence            999999999999999999854 467888999999999999999999999999999865  489999999876554433  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  +++++.+++++||+||+|+||++.|++...... ++....+....|.+++.+|+|+|++++||+++. 
T Consensus       158 ~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  236 (255)
T PRK07523        158 PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDA-  236 (255)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch-
Confidence                        688899999999999999999999998654332 233345566778899999999999999999987 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++||++|++|
T Consensus       237 ~~~~~G~~i~~~  248 (255)
T PRK07523        237 SSFVNGHVLYVD  248 (255)
T ss_pred             hcCccCcEEEEC
Confidence            889999999886

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=251.48  Aligned_cols=224  Identities=32%  Similarity=0.457  Sum_probs=188.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+++++|++|||||+++||.+++++|+++|++|++++|+...    .+...++      ...++.++.+|++++++++++
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~----~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~   79 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV----AEVAAQL------LGGNAKGLVCDVSDSQSVEAA   79 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHh------hCCceEEEEecCCCHHHHHHH
Confidence            356899999999999999999999999999999999997432    1112222      234567899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||+|... ..++.+.+.++|++.+++|+.+++++++.+.++|++  .++||++||..+..+.+. 
T Consensus        80 ~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  158 (255)
T PRK06841         80 VAAVISAFGRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERH  158 (255)
T ss_pred             HHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCC
Confidence            9999999999999999999854 467788899999999999999999999999999865  479999999876555443 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.+++++||+||+|+||+++|++.......+..+.+....|.+++.+|+|+++++++|+++. 
T Consensus       159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-  237 (255)
T PRK06841        159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDA-  237 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc-
Confidence                         688999999999999999999999998654333333344556778899999999999999999988 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.+++|++|.+|
T Consensus       238 ~~~~~G~~i~~d  249 (255)
T PRK06841        238 AAMITGENLVID  249 (255)
T ss_pred             ccCccCCEEEEC
Confidence            899999999987

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-35  Score=249.88  Aligned_cols=225  Identities=30%  Similarity=0.435  Sum_probs=187.6

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccc--------hhhhHHHHHHHHHHhhhcCCCCceEEeccC
Q 039897           38 NKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQ--------EEKDAQETLEILREAKTSDAKDPMAISADL  107 (272)
Q Consensus        38 ~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (272)
                      .+|+||++|||||+  +|||+++|++|+++|++|+++++...        ......+..+++.+    .+.++.++++|+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~D~   77 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK----NGVKVSSMELDL   77 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh----cCCeEEEEEcCC
Confidence            46899999999999  49999999999999999999864311        11222222333332    466788999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCC
Q 039897          108 GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSV  185 (272)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~  185 (272)
                      ++++++.++++++.+.+|.+|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||.
T Consensus        78 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~  156 (256)
T PRK12859         78 TQNDAPKELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSG  156 (256)
T ss_pred             CCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence            9999999999999999999999999999854 367889999999999999999999999999999964  5799999999


Q ss_pred             CCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhh
Q 039897          186 EPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       186 ~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                      .+..+.+.              +++++.++.++||+||+|+||+++|++..    ....+.+....|+++..+|+|+|+.
T Consensus       157 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~  232 (256)
T PRK12859        157 QFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT----EEIKQGLLPMFPFGRIGEPKDAARL  232 (256)
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC----HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            87765543              68889999999999999999999998743    2333345556788888999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.||+++. +.+++|++|.+|
T Consensus       233 ~~~l~s~~-~~~~~G~~i~~d  252 (256)
T PRK12859        233 IKFLASEE-AEWITGQIIHSE  252 (256)
T ss_pred             HHHHhCcc-ccCccCcEEEeC
Confidence            99999987 889999999987

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.5e-36  Score=255.40  Aligned_cols=223  Identities=29%  Similarity=0.428  Sum_probs=179.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|+++||||++|||++++++|+++|++|++++|+.+..+.+       .+.   .+.++.++.+|+++++++.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l-------~~~---~~~~~~~~~~D~~~~~~~~~~~~   71 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQEL-------EAA---HGDAVVGVEGDVRSLDDHKEAVA   71 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-------Hhh---cCCceEEEEeccCCHHHHHHHHH
Confidence            47899999999999999999999999999999999874332221       110   24567889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCH----HHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDE----ERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~----~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~  193 (272)
                      ++.+.++++|+||||||+.....++.+.+.    ++|++.+++|+.++++++++++|.|++ +++||+++|..+..+.+.
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  151 (262)
T TIGR03325        72 RCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG  151 (262)
T ss_pred             HHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC
Confidence            999999999999999997533234444443    579999999999999999999999854 588999999877655432


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---CH------HHHHhhccCCCCCCCCCccchhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---SE------EESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                                    +++++.|++++ |+||+|+||+++|++.....   ..      ...+......|++++.+|+|+|+
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~  230 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTG  230 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhh
Confidence                          68899999887 99999999999999864210   11      11223345678999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+++....++||++|.+|
T Consensus       231 ~~~~l~s~~~~~~~tG~~i~vd  252 (262)
T TIGR03325       231 AYVFFATRGDTVPATGAVLNYD  252 (262)
T ss_pred             heeeeecCCCcccccceEEEec
Confidence            9999998742568999999987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=250.84  Aligned_cols=226  Identities=35%  Similarity=0.475  Sum_probs=185.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..|++|++|||||++|||++++++|+++|++|++++|+..    ..+..+++..    .+.++.++.+|+++.+++.+++
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   75 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL----VHEVAAELRA----AGGEALALTADLETYAGAQAAM   75 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH----HHHHHHHHHh----cCCeEEEEEEeCCCHHHHHHHH
Confidence            4588999999999999999999999999999999998632    2223333332    3556788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC--hh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS--PE  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~--~~  193 (272)
                      +++.+.++++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+....  +.
T Consensus        76 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y  155 (260)
T PRK12823         76 AAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPY  155 (260)
T ss_pred             HHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCcc
Confidence            9999999999999999997544567888999999999999999999999999999965  3799999998654221  11


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-----C-------CHHHHHhhccCCCCCCCCCccchhhh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-----F-------SEEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-----~-------~~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                +++++.|++++||+||+|+||+++|++....     .       ..+.........|+++..+|+|+|++
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  235 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAA  235 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHH
Confidence                      6788999999999999999999999863110     0       01222334456788899999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++||+++. +.+++|+++++|
T Consensus       236 ~~~l~s~~-~~~~~g~~~~v~  255 (260)
T PRK12823        236 ILFLASDE-ASYITGTVLPVG  255 (260)
T ss_pred             HHHHcCcc-cccccCcEEeec
Confidence            99999987 889999999987

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.2e-36  Score=251.41  Aligned_cols=213  Identities=27%  Similarity=0.400  Sum_probs=172.2

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           34 YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        34 ~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ...+.++.||+|||||||+|||.++|.+|+++|++++++.|..+..+.+.   +++++.... . ++..+++|++|++++
T Consensus         4 ~~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~---~~l~~~~~~-~-~v~~~~~Dvs~~~~~   78 (282)
T KOG1205|consen    4 NLFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVA---EELRKLGSL-E-KVLVLQLDVSDEESV   78 (282)
T ss_pred             cccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHH---HHHHHhCCc-C-ccEEEeCccCCHHHH
Confidence            34567899999999999999999999999999999999999855555553   444433322 2 699999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccCC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHS  191 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~~  191 (272)
                      .++++.+...+|++|+||||||+.. ...+.+.+.+++..+|++|++|+.+++++++|+|++.  |+||++||++|..+.
T Consensus        79 ~~~~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~  157 (282)
T KOG1205|consen   79 KKFVEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL  157 (282)
T ss_pred             HHHHHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC
Confidence            9999999999999999999999976 6788899999999999999999999999999999773  999999999998887


Q ss_pred             hh--------------HHHHHHHHhhCC--eEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhh--hhh
Q 039897          192 PE--------------ARGLALQLVERG--IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAP--CYV  253 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~g--i~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~--~~~  253 (272)
                      |.              ..+|+.|+.+.+  |++ .|+||+|+|++...........     ........++|++.  .+.
T Consensus       158 P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  231 (282)
T KOG1205|consen  158 PFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLGEEGK-----SQQGPFLRTEDVADPEAVA  231 (282)
T ss_pred             CcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhcccccc-----ccccchhhhhhhhhHHHHH
Confidence            76              679999999987  666 9999999999875543322211     12233345556644  555


Q ss_pred             hhhcc
Q 039897          254 FLACN  258 (272)
Q Consensus       254 ~L~s~  258 (272)
                      +....
T Consensus       232 ~~i~~  236 (282)
T KOG1205|consen  232 YAIST  236 (282)
T ss_pred             HHHhc
Confidence            55443

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=4e-35  Score=248.54  Aligned_cols=226  Identities=29%  Similarity=0.503  Sum_probs=189.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+++.+|++|||||++|||++++++|+++|++|++++|+...   ......++..    .+.++.++.+|+++.+++.++
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~D~~~~~~i~~~   78 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA---ANHVVDEIQQ----LGGQAFACRCDITSEQELSAL   78 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            345889999999999999999999999999999999987443   3333333332    355688899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++.+.+.++++|++|||||.... .++ +.+.++|+..+++|+.+++++++++.|+|++  .++||++||.++..+.+. 
T Consensus        79 ~~~~~~~~~~~d~li~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  156 (255)
T PRK06113         79 ADFALSKLGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM  156 (255)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCc
Confidence            99999999999999999998543 344 6789999999999999999999999999864  479999999887655433 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.++.++||+||+|+||+++|++......++......+..+..++.+|+|++++++||+++. 
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~-  235 (255)
T PRK06113        157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA-  235 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc-
Confidence                         678899999999999999999999998765444444444556678888999999999999999887 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|++|++|
T Consensus       236 ~~~~~G~~i~~~  247 (255)
T PRK06113        236 ASWVSGQILTVS  247 (255)
T ss_pred             ccCccCCEEEEC
Confidence            889999999987

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=2.1e-35  Score=249.00  Aligned_cols=223  Identities=32%  Similarity=0.465  Sum_probs=185.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||.+++++|+++|++|++++|+.  .....   +.+.+    .+.++.++.+|+++++++.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~---~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   72 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQ---QQVEA----LGRRFLSLTADLSDIEAIKALVD   72 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHH---HHHHh----cCCceEEEECCCCCHHHHHHHHH
Confidence            58899999999999999999999999999999999863  12222   22222    35568899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh--
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~--  193 (272)
                      ++.+.++++|++|||||.... .++.+.+.++|++++++|+.+++++++++++.|++   .++||++||..+..+.+.  
T Consensus        73 ~~~~~~~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  151 (248)
T TIGR01832        73 SAVEEFGHIDILVNNAGIIRR-ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVP  151 (248)
T ss_pred             HHHHHcCCCCEEEECCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCc
Confidence            999999999999999998543 56778899999999999999999999999999854   379999999876554332  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  +++++.++.++||+||+|+||++.|++...... ......+....|.+++.+|+|+|++++||+++. 
T Consensus       152 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-  230 (248)
T TIGR01832       152 SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSA-  230 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc-
Confidence                        788999999999999999999999998643322 222233455678889999999999999999987 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|+++.+|
T Consensus       231 ~~~~~G~~i~~d  242 (248)
T TIGR01832       231 SDYVNGYTLAVD  242 (248)
T ss_pred             ccCcCCcEEEeC
Confidence            889999999887

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=250.51  Aligned_cols=222  Identities=36%  Similarity=0.559  Sum_probs=184.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+++++|+++||||++|||++++++|+++|++|++++++...   .   .+++..    .  ++.++.+|++++++++++
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~---~---~~~l~~----~--~~~~~~~Dl~~~~~~~~~   69 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN---E---AKELRE----K--GVFTIKCDVGNRDQVKKS   69 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH---H---HHHHHh----C--CCeEEEecCCCHHHHHHH
Confidence            356889999999999999999999999999999988775321   1   122221    1  477899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC-hh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS-PE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~-~~  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|++  .++||++||..+.... +.
T Consensus        70 ~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~  148 (255)
T PRK06463         70 KEVVEKEFGRVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEG  148 (255)
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCC
Confidence            9999999999999999999854 467788899999999999999999999999999963  5899999998765321 11


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH----HHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE----EESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                    +++++.|+.++||+||+|+||+++|++.......    .....+....+++++.+|+|+|+.++||
T Consensus       149 ~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  228 (255)
T PRK06463        149 TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFL  228 (255)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHH
Confidence                          6889999999999999999999999986432221    2233445667888999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||+++.+|
T Consensus       229 ~s~~-~~~~~G~~~~~d  244 (255)
T PRK06463        229 ASDD-ARYITGQVIVAD  244 (255)
T ss_pred             cChh-hcCCCCCEEEEC
Confidence            9988 889999999887

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-35  Score=247.84  Aligned_cols=227  Identities=30%  Similarity=0.554  Sum_probs=190.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+..  +......+++..    .+.++.++.+|+++.+++.+++
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~--~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~i~~~~   76 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDE--EEANDVAEEIKK----AGGEAIAVKGDVTVESDVVNLI   76 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHH
Confidence            4589999999999999999999999999999999888532  233333444432    3556788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      +.+.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++++|++   .++||++||..+..+.+. 
T Consensus        77 ~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~  155 (261)
T PRK08936         77 QTAVKEFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLF  155 (261)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCC
Confidence            999999999999999999854 357788899999999999999999999999999864   479999999876554333 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   +++++.++.++||+||+|+||+++|++....+ .++.........|.+++.+++|+++.++||+++.
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  235 (261)
T PRK08936        156 VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE  235 (261)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence                         67889999999999999999999999865433 2333334456778889999999999999999987


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.+++|++|.+|
T Consensus       236 -~~~~~G~~i~~d  247 (261)
T PRK08936        236 -ASYVTGITLFAD  247 (261)
T ss_pred             -cCCccCcEEEEC
Confidence             889999999887

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=5.2e-35  Score=247.87  Aligned_cols=222  Identities=32%  Similarity=0.503  Sum_probs=185.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||++|||.++++.|+++|++|++++|+....+.+   ..++..    .+.++.++.+|++++++++++++++.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~---~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   74 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAA---ADKLSK----DGGKAIAVKADVSDRDQVFAAVRQVV   74 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHh----cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            78999999999999999999999999999999975443333   333332    34567889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-----
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +.++++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++.+.+.|++   +++||++||..+..+.+.     
T Consensus        75 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  153 (256)
T PRK08643         75 DTFGDLNVVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYS  153 (256)
T ss_pred             HHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhH
Confidence            99999999999999854 467888899999999999999999999999999855   378999999877655443     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---------CHH-HHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---------SEE-ESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                               ++.++.|+.++||+||+|+||+++|++.....         +.+ ....+....+.+++.+|+|+++.++|
T Consensus       154 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (256)
T PRK08643        154 STKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSF  233 (256)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence                     67889999999999999999999999864311         111 12234556788899999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|.+|
T Consensus       234 L~~~~-~~~~~G~~i~vd  250 (256)
T PRK08643        234 LAGPD-SDYITGQTIIVD  250 (256)
T ss_pred             HhCcc-ccCccCcEEEeC
Confidence            99988 889999999987

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=4.4e-35  Score=248.51  Aligned_cols=228  Identities=34%  Similarity=0.480  Sum_probs=191.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++++||++|||||++|||+++++.|+++|++|++++|+.++   +.+..+++...  ..+.++.++.+|+++++++.+++
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~---~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~~~~~~   79 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADA---LAQARDELAEE--FPEREVHGLAADVSDDEDRRAIL   79 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHhh--CCCCeEEEEECCCCCHHHHHHHH
Confidence            56889999999999999999999999999999999997544   33333333321  02457888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +.+.+.++++|+||||+|... ..++.+.+.++|++.+++|+.++++++++++|+|++  .++||++||..+..+.+.  
T Consensus        80 ~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~  158 (257)
T PRK09242         80 DWVEDHWDGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGA  158 (257)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCc
Confidence            999999999999999999843 467788899999999999999999999999999965  479999999877655433  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  +++++.|+.++||+||+|+||++.|++...... ++..+.+..+.|..+..+|+|+++++.||+++. 
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-  237 (257)
T PRK09242        159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPA-  237 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-
Confidence                        688899999999999999999999998754433 233444556778889999999999999999887 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|+++.+|
T Consensus       238 ~~~~~g~~i~~~  249 (257)
T PRK09242        238 ASYITGQCIAVD  249 (257)
T ss_pred             cccccCCEEEEC
Confidence            788999999886

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-35  Score=250.36  Aligned_cols=223  Identities=29%  Similarity=0.428  Sum_probs=182.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++++|++||||+++|||+++++.|+++|++|++++|+....   .+..+++...   .+.++.++.+|+++++++++++
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~   76 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADAL---EALAADLRAA---HGVDVAVHALDLSSPEAREQLA   76 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHHHhh---cCCceEEEEecCCCHHHHHHHH
Confidence            468899999999999999999999999999999999985433   3333333321   2456788999999999998887


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +.    ++++|++|||+|... ..++.+.+.++|+.++++|+.++++++++++|.|++  .++||+++|..+..+.+.  
T Consensus        77 ~~----~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  151 (259)
T PRK06125         77 AE----AGDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYI  151 (259)
T ss_pred             HH----hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCch
Confidence            64    478999999999854 468889999999999999999999999999999965  378999999876544322  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---------CHHHHHhhccCCCCCCCCCccchhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---------SEEESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                                  +++++.|+.++||+||+|+||+++|++.....         .++....+....|.+++.+|+|+|+.+
T Consensus       152 ~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (259)
T PRK06125        152 CGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV  231 (259)
T ss_pred             HhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence                        67888999999999999999999999643211         122333445567888999999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+++. +.++||++|.+|
T Consensus       232 ~~l~~~~-~~~~~G~~i~vd  250 (259)
T PRK06125        232 AFLASPR-SGYTSGTVVTVD  250 (259)
T ss_pred             HHHcCch-hccccCceEEec
Confidence            9999887 889999999987

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-35  Score=251.33  Aligned_cols=218  Identities=31%  Similarity=0.466  Sum_probs=181.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++++....                ...++.++.+|+++++++++++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~----------------~~~~~~~~~~D~~~~~~~~~~~   68 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG----------------QHENYQFVPTDVSSAEEVNHTV   68 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc----------------ccCceEEEEccCCCHHHHHHHH
Confidence            458899999999999999999999999999999999875432                1235778999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCC--------CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKA--------GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEP  187 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~--------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~  187 (272)
                      +.+.+.++++|+||||||.....        .++.+.+.++|++++++|+.+++++++++.++|++  .++||++||..+
T Consensus        69 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  148 (266)
T PRK06171         69 AEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG  148 (266)
T ss_pred             HHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc
Confidence            99999999999999999975321        12456789999999999999999999999999965  478999999887


Q ss_pred             ccCChh--------------HHHHHHHHhhCCeEEEEEeccccc-CCCCCCCC----------C-HHHHHhhcc--CCCC
Q 039897          188 LWHSPE--------------ARGLALQLVERGIRVNGVAPGPIW-TPLIPSSF----------S-EEESAQFGS--EVPM  239 (272)
Q Consensus       188 ~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~-t~~~~~~~----------~-~~~~~~~~~--~~~~  239 (272)
                      ..+.+.              +++++.|++++||+||+|+||+++ |++.....          . .+..+.+..  ..|+
T Consensus       149 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  228 (266)
T PRK06171        149 LEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL  228 (266)
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC
Confidence            655433              688999999999999999999997 55532111          1 122233444  6789


Q ss_pred             CCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          240 KRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++..+|+|||+++.||+++. +.++||++|.+|
T Consensus       229 ~r~~~~~eva~~~~fl~s~~-~~~itG~~i~vd  260 (266)
T PRK06171        229 GRSGKLSEVADLVCYLLSDR-ASYITGVTTNIA  260 (266)
T ss_pred             CCCCCHHHhhhheeeeeccc-cccceeeEEEec
Confidence            99999999999999999988 889999999987

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=6.3e-35  Score=250.62  Aligned_cols=227  Identities=29%  Similarity=0.429  Sum_probs=182.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..   .+..+++.     ...++.++++|+++.++++++
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~   84 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLG---QNVCDSLG-----GEPNVCFFHCDVTVEDDVSRA   84 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhc-----CCCceEEEEeecCCHHHHHHH
Confidence            3568899999999999999999999999999999999874332   22233221     245688999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      ++.+.+.++++|+||||||.... ..++.+.+.++|++++++|+.+++++++++.+.|.+  .|+|++++|..+..+.+.
T Consensus        85 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~  164 (280)
T PLN02253         85 VDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG  164 (280)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC
Confidence            99999999999999999998532 245778899999999999999999999999999854  589999999876554322


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHH-----HHH----hhccCCCC-CCCCCccchh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE-----ESA----QFGSEVPM-KRAGQPIEVA  249 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~-----~~~----~~~~~~~~-~~~~~~~dva  249 (272)
                                    +++++.|++++||+||+|+||++.|++.....+++     ...    ......++ ++..+|+|+|
T Consensus       165 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva  244 (280)
T PLN02253        165 PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVA  244 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHH
Confidence                          68899999999999999999999998754322211     110    11112222 4567899999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++||+++. +.+++|++|.+|
T Consensus       245 ~~~~~l~s~~-~~~i~G~~i~vd  266 (280)
T PLN02253        245 NAVLFLASDE-ARYISGLNLMID  266 (280)
T ss_pred             HHHHhhcCcc-cccccCcEEEEC
Confidence            9999999987 889999999887

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-35  Score=247.55  Aligned_cols=217  Identities=29%  Similarity=0.445  Sum_probs=185.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++++|++|||||++|||++++++|+++|++|++++|+...        .   .    ...++.++++|+++++++++++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~---~----~~~~~~~~~~D~~~~~~~~~~~   66 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------T---V----DGRPAEFHAADVRDPDQVAALV   66 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------h---h----cCCceEEEEccCCCHHHHHHHH
Confidence            35889999999999999999999999999999999997432        0   0    3456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      +.+.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.+.|.+   .++||++||..+..+.+. 
T Consensus        67 ~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~  145 (252)
T PRK07856         67 DAIVERHGRLDVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGT  145 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCC
Confidence            999999999999999999853 456778899999999999999999999999998864   379999999987765443 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   ++.++.|+.++ |+||+|+||+++|++..... .++....+....|.++..+|+|+|+.++||+++.
T Consensus       146 ~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        146 AAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDL  224 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence                         68889999888 99999999999999864332 2333445566788899999999999999999887


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|.+|
T Consensus       225 -~~~i~G~~i~vd  236 (252)
T PRK07856        225 -ASYVSGANLEVH  236 (252)
T ss_pred             -cCCccCCEEEEC
Confidence             889999999987

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-35  Score=247.90  Aligned_cols=223  Identities=34%  Similarity=0.508  Sum_probs=186.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +.+.+|++|||||++|||+++++.|+++|++|++++|+....+   +..++       ...++.++.+|+++++++.+++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~-------~~~~~~~~~~D~~~~~~~~~~~   71 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARAR---LAALE-------IGPAAIAVSLDVTRQDSIDRIV   71 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH---HHHHH-------hCCceEEEEccCCCHHHHHHHH
Confidence            3588999999999999999999999999999999999754332   22222       2345788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      +.+.+.++++|+||||||... ..++.+.+.++|+..+++|+.+++++++++.+.|.+   +++||++||..+..+.+. 
T Consensus        72 ~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  150 (257)
T PRK07067         72 AAAVERFGGIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALV  150 (257)
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCC
Confidence            999999999999999999854 467888899999999999999999999999998854   478999999765544332 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----------CHHHHHhhccCCCCCCCCCccchhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                                   +++++.|+.++||+||+|.||+++|++.....          ..+....+....|++++.+|+|+|+
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (257)
T PRK07067        151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG  230 (257)
T ss_pred             chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence                         67888999999999999999999998753210          1233344566788999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+++. ..+++|++|++|
T Consensus       231 ~~~~l~s~~-~~~~~g~~~~v~  251 (257)
T PRK07067        231 MALFLASAD-ADYIVAQTYNVD  251 (257)
T ss_pred             HHHHHhCcc-cccccCcEEeec
Confidence            999999987 889999999987

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=244.63  Aligned_cols=222  Identities=29%  Similarity=0.422  Sum_probs=183.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ||++|||||++|||++++++|+++|++|++++|+....   .+..+++.+    .+.++.++++|++++++++++++++.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~---~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL---EEAKLEIEQ----FPGQVLTVQMDVRNPEDVQKMVEQID   73 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999984433   333333332    34578899999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-----
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +.++++|+||||+|... ..++.+.+.++|++++++|+.++++++++++++|.+   .++||++||..+..+.+.     
T Consensus        74 ~~~~~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~  152 (252)
T PRK07677         74 EKFGRIDALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSA  152 (252)
T ss_pred             HHhCCccEEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchH
Confidence            99999999999999743 367788999999999999999999999999998743   489999999877654322     


Q ss_pred             ---------HHHHHHHHhh-CCeEEEEEecccccCCCC-CCC-CCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ---------ARGLALQLVE-RGIRVNGVAPGPIWTPLI-PSS-FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ---------~~~la~e~~~-~gi~vn~i~PG~v~t~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                               +++++.|+.+ +||+||+|+||+++|+.. ... ..++..+......+.+++.+|+|+++.+.||+++. +
T Consensus       153 ~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~  231 (252)
T PRK07677        153 AAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDE-A  231 (252)
T ss_pred             HHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcc-c
Confidence                     7889999975 699999999999996432 211 13344445556678889999999999999999987 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||+++.+|
T Consensus       232 ~~~~g~~~~~~  242 (252)
T PRK07677        232 AYINGTCITMD  242 (252)
T ss_pred             cccCCCEEEEC
Confidence            89999999886

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-35  Score=247.38  Aligned_cols=220  Identities=29%  Similarity=0.365  Sum_probs=182.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..+++||++|||||++|||++++++|+++|++|++++|+....                ...++.++.+|+++++++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~~~D~~~~~~~~~   66 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------------LPEGVEFVAADLTTAEGCAA   66 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------------cCCceeEEecCCCCHHHHHH
Confidence            34568999999999999999999999999999999999974321                23457789999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQY-KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+.++++|+||||||... ...++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+
T Consensus        67 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~  146 (260)
T PRK06523         67 VARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP  146 (260)
T ss_pred             HHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC
Confidence            99999999999999999999743 2356777899999999999999999999999999965  37899999988765533


Q ss_pred             -h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---------CHHH-HHh---hccCCCCCCCCC
Q 039897          193 -E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---------SEEE-SAQ---FGSEVPMKRAGQ  244 (272)
Q Consensus       193 -~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---------~~~~-~~~---~~~~~~~~~~~~  244 (272)
                       .              +++++.++.++||+||+|+||+++|++.....         ..+. ...   .....|.++..+
T Consensus       147 ~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  226 (260)
T PRK06523        147 ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAE  226 (260)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCC
Confidence             1              67889999999999999999999999753211         1111 111   123468889999


Q ss_pred             ccchhhhhhhhhccCCCCcccceeeccC
Q 039897          245 PIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       245 ~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+++.+.||+++. ..++||++|.+|
T Consensus       227 ~~~va~~~~~l~s~~-~~~~~G~~~~vd  253 (260)
T PRK06523        227 PEEVAELIAFLASDR-AASITGTEYVID  253 (260)
T ss_pred             HHHHHHHHHHHhCcc-cccccCceEEec
Confidence            999999999999987 889999999887

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=248.54  Aligned_cols=212  Identities=24%  Similarity=0.335  Sum_probs=173.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|+++|||+ +|||++++++|+ +|++|++++|+..   .+.+..+++..    .+.++.++.+|+++++++.++++.+ 
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~---~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~i~~~~~~~-   71 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEE---NLEAAAKTLRE----AGFDVSTQEVDVSSRESVKALAATA-   71 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHH---HHHHHHHHHHh----cCCeEEEEEeecCCHHHHHHHHHHH-
Confidence            689999998 699999999996 8999999999743   33333344432    3457888999999999999999988 


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC----------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS----------  191 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~----------  191 (272)
                      ++++++|+||||||+..        ..++|++++++|+.+++++++.+.|.|++++++|+++|.++....          
T Consensus        72 ~~~g~id~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~  143 (275)
T PRK06940         72 QTLGPVTGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERAL  143 (275)
T ss_pred             HhcCCCCEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccc
Confidence            56899999999999842        236789999999999999999999999888899999998765321          


Q ss_pred             -----------------------h-h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC---HHHHHhhc
Q 039897          192 -----------------------P-E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS---EEESAQFG  234 (272)
Q Consensus       192 -----------------------~-~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~---~~~~~~~~  234 (272)
                                             . .          +++++.|++++|||||+|+||+++|++......   ++..+...
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~  223 (275)
T PRK06940        144 ATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMF  223 (275)
T ss_pred             cccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHh
Confidence                                   1 1          789999999999999999999999998643221   22233444


Q ss_pred             cCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       235 ~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ...|++++.+|+|+|+.++||+++. +.++||++|.+|
T Consensus       224 ~~~p~~r~~~peeia~~~~fL~s~~-~~~itG~~i~vd  260 (275)
T PRK06940        224 AKSPAGRPGTPDEIAALAEFLMGPR-GSFITGSDFLVD  260 (275)
T ss_pred             hhCCcccCCCHHHHHHHHHHHcCcc-cCcccCceEEEc
Confidence            5678899999999999999999988 899999999987

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=243.15  Aligned_cols=227  Identities=27%  Similarity=0.389  Sum_probs=192.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.++++|+++||||+++||++++++|+++|++|++++|+...   +....+++..    .+.++.++.+|+++++++.++
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~   78 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT---LEAAVAALRA----AGGAAEALAFDIADEEAVAAA   78 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH---HHHHHHHHHh----cCCceEEEEccCCCHHHHHHH
Confidence            566899999999999999999999999999999999998433   3333344432    455688999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+++.|++  .++||++||..+..+.++ 
T Consensus        79 ~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~  157 (256)
T PRK06124         79 FARIDAEHGRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGD  157 (256)
T ss_pred             HHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCc
Confidence            9999999999999999999854 467888999999999999999999999999999954  589999999877655443 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   ++.++.|+.+.||+||+|+||+++|++..... .++..+.+....+.+++.+|+|++.++++|+++.
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  237 (256)
T PRK06124        158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPA  237 (256)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence                         57888999889999999999999999854332 2333445556678889999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||+.|.+|
T Consensus       238 -~~~~~G~~i~~d  249 (256)
T PRK06124        238 -ASYVNGHVLAVD  249 (256)
T ss_pred             -cCCcCCCEEEEC
Confidence             889999999887

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-34  Score=243.74  Aligned_cols=224  Identities=26%  Similarity=0.350  Sum_probs=183.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+++|++|||||++|||+++++.|+++|++|+++.++..  ........+       ...++.++.+|+++++++.++++
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~--~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   72 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADE-------LGDRAIALQADVTDREQVQAMFA   72 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH--HHHHHHHHH-------hCCceEEEEcCCCCHHHHHHHHH
Confidence            467899999999999999999999999999998766432  222222211       23567889999999999999999


Q ss_pred             HHHHhcCC-ccEEEEcccccC-----CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccC
Q 039897          119 EVVNAYGK-IDILVNNAAVQY-----KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWH  190 (272)
Q Consensus       119 ~~~~~~g~-ld~vI~~ag~~~-----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~  190 (272)
                      ++.+.++. +|++|||||...     ...++.+.+.++|++.+++|+.+++++++++++.|.+  .++|++++|.....+
T Consensus        73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  152 (253)
T PRK08642         73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNP  152 (253)
T ss_pred             HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC
Confidence            99998887 999999998642     1245778899999999999999999999999999854  489999999755433


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      ...              +++++.++.++||+||+|+||+++|+.......++....+....|++++.+|+|+++++.||+
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  232 (253)
T PRK08642        153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFA  232 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc
Confidence            211              788999999999999999999999986544434444455566788899999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.+++|++|.+|
T Consensus       233 ~~~-~~~~~G~~~~vd  247 (253)
T PRK08642        233 SPW-ARAVTGQNLVVD  247 (253)
T ss_pred             Cch-hcCccCCEEEeC
Confidence            987 889999999987

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2.9e-34  Score=243.43  Aligned_cols=223  Identities=33%  Similarity=0.482  Sum_probs=185.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+|++|||||++|||++++++|+++|++|++++++..  +......+++..    .+.++.++.+|++++++++++++++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE--EGAKETAEEVRS----HGVRAEIRQLDLSDLPEGAQALDKL   74 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCCh--HHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHHH
Confidence            3689999999999999999999999999999876532  223333333332    4567889999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~----  193 (272)
                      .+.++++|+||||+|.... .++.+.+.++|++++++|+.+++++++++.++|.+   +++||++||..+..+.+.    
T Consensus        75 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y  153 (256)
T PRK12743         75 IQRLGRIDVLVNNAGAMTK-APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAY  153 (256)
T ss_pred             HHHcCCCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchh
Confidence            9999999999999998543 56778899999999999999999999999999854   479999999876554432    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.++.++||+||+|+||+++|++.... ..+.........+..+..+|+|+++.+.||+++. ..+
T Consensus       154 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~  231 (256)
T PRK12743        154 TAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEG-ASY  231 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc-ccC
Confidence                      6788999999999999999999999986442 2333333445678888999999999999999887 889


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      ++|+++.+|
T Consensus       232 ~~G~~~~~d  240 (256)
T PRK12743        232 TTGQSLIVD  240 (256)
T ss_pred             cCCcEEEEC
Confidence            999999887

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-34  Score=244.82  Aligned_cols=226  Identities=28%  Similarity=0.415  Sum_probs=188.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++.+|++||||+++|||.+++++|+++|++|++++|+.+.   +.+..+.+..    .+.++.++++|+++++++++++
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~   78 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQEL---VDKGLAAYRE----LGIEAHGYVCDVTDEDGVQAMV   78 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHH
Confidence            56899999999999999999999999999999999887443   3333333332    3557889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++.++|+|++  .++||++||..+..+.+.  
T Consensus        79 ~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  157 (265)
T PRK07097         79 SQIEKEVGVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVS  157 (265)
T ss_pred             HHHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCc
Confidence            999999999999999999865 367888999999999999999999999999999965  489999999876554432  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-------HHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-------EEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                                  +++++.++.++||+||+|+||++.|++......       ...........|.+++.+|+|+|+.+++
T Consensus       158 ~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (265)
T PRK07097        158 AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVF  237 (265)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHH
Confidence                        788999999999999999999999997643211       1122233445677889999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.+++|+++.+|
T Consensus       238 l~~~~-~~~~~g~~~~~~  254 (265)
T PRK07097        238 LASDA-SNFVNGHILYVD  254 (265)
T ss_pred             HhCcc-cCCCCCCEEEEC
Confidence            99987 889999999876

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=240.72  Aligned_cols=227  Identities=36%  Similarity=0.537  Sum_probs=191.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +.+++|++|||||++|||++++++|+++|++|+++.++...  ......+++..    .+.++.++.+|+++.+++++++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~   74 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAA--AADELVAEIEA----AGGRAIAVQADVADAAAVTRLF   74 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHH--HHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHH
Confidence            35789999999999999999999999999999988775432  22333333332    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +++.+.++++|+||||||... ..++.+.+.++|++++++|+.+++.+++++++.|++.++||++||.....+.+.    
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y  153 (245)
T PRK12937         75 DAAETAFGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPY  153 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchh
Confidence            999999999999999999854 367788899999999999999999999999999988889999999876554433    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.++.+.||++++|+||++.|++.......+....+....|+.+..+++|+++.+.||+++. +.+
T Consensus       154 ~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~-~~~  232 (245)
T PRK12937        154 AASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPD-GAW  232 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc-ccC
Confidence                      577888888899999999999999998644334455556667788889999999999999999887 889


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      ++|++|++|
T Consensus       233 ~~g~~~~~~  241 (245)
T PRK12937        233 VNGQVLRVN  241 (245)
T ss_pred             ccccEEEeC
Confidence            999999987

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=246.04  Aligned_cols=225  Identities=30%  Similarity=0.434  Sum_probs=185.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+..    ..+...++..    .+.++.++.+|+++++++++++
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~----~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~   73 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE----IEKLADELCG----RGHRCTAVVADVRDPASVAAAI   73 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH----HHHHHHHHHH----hCCceEEEECCCCCHHHHHHHH
Confidence            4588999999999999999999999999999999998742    2222333322    3456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCc-cCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL-WHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~-~~~~~-  193 (272)
                      +++.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++++++.++++|++  .++||++||..+. .+.+. 
T Consensus        74 ~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  152 (263)
T PRK08226         74 KRAKEKEGRIDILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGE  152 (263)
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCc
Confidence            999999999999999999854 467788899999999999999999999999998854  4789999997652 22221 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-------CHHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-------SEEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                                   +++++.++.++||+||+|+||+++|++.....       ..+....+....|++++.+|+|+|+.++
T Consensus       153 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~  232 (263)
T PRK08226        153 TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAA  232 (263)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHH
Confidence                         67889999889999999999999999764311       1223344556678889999999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      ||+++. +.++||++|.+|
T Consensus       233 ~l~~~~-~~~~~g~~i~~d  250 (263)
T PRK08226        233 FLASDE-SSYLTGTQNVID  250 (263)
T ss_pred             HHcCch-hcCCcCceEeEC
Confidence            999987 889999999987

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-34  Score=244.46  Aligned_cols=226  Identities=29%  Similarity=0.435  Sum_probs=187.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .|.+|+++||||++|||++++++|+++|++|++++|+...   +++...++..    .+.++.++.+|++++++++++++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER---LDEVAAEIDD----LGRRALAVPTDITDEDQCANLVA   74 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHH----hCCceEEEecCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997543   3333333332    35568899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~----  193 (272)
                      ++.+.++++|+||||||......++.+.+.++|++.+++|+.+++.+++++.+.|++ +++||++||.....+.+.    
T Consensus        75 ~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y  154 (258)
T PRK07890         75 LALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAY  154 (258)
T ss_pred             HHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchh
Confidence            999999999999999998654467788899999999999999999999999999865 579999999877655433    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---------C-HHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---------S-EEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                                +++++.++.++||++|+|+||++.|++.....         . ++....+....+.++..+++|++++++
T Consensus       155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~  234 (258)
T PRK07890        155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVL  234 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHH
Confidence                      67888888889999999999999998753211         1 222334445678888899999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      +|+++. ..+++|+++.+|
T Consensus       235 ~l~~~~-~~~~~G~~i~~~  252 (258)
T PRK07890        235 FLASDL-ARAITGQTLDVN  252 (258)
T ss_pred             HHcCHh-hhCccCcEEEeC
Confidence            999876 779999999776

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-34  Score=240.47  Aligned_cols=225  Identities=31%  Similarity=0.468  Sum_probs=188.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.   +.+...++..    ...++.++.+|+++++++.++++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   78 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVER---LKELRAEIEA----EGGAAHVVSLDVTDYQSIKAAVA   78 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHH
Confidence            4889999999999999999999999999999999998443   3333333332    34568889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----------CCeEEEecCCCCc
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----------GSAIINTTSVEPL  188 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----------~g~iv~vsS~~~~  188 (272)
                      ++.+.++++|++|||+|... ..++.+.+.++|+.++++|+.+++.+++++.+.|++          .++||++||..+.
T Consensus        79 ~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  157 (258)
T PRK06949         79 HAETEAGTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL  157 (258)
T ss_pred             HHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence            99999999999999999854 356777889999999999999999999999988743          3689999998766


Q ss_pred             cCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          189 WHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       189 ~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      .+.+.              ++.++.++.++||+||+|+||+++|++.......+....+....+..+...|+|+++.+.|
T Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  237 (258)
T PRK06949        158 RVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLL  237 (258)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            54432              6788899988999999999999999986543333333455666788899999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|.+|
T Consensus       238 l~~~~-~~~~~G~~i~~d  254 (258)
T PRK06949        238 LAADE-SQFINGAIISAD  254 (258)
T ss_pred             HhChh-hcCCCCcEEEeC
Confidence            99988 889999999987

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=7.3e-34  Score=240.83  Aligned_cols=224  Identities=26%  Similarity=0.361  Sum_probs=182.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ...++||++|||||+++||+++++.|+++|++|++++++.....   +..+.       .+.++.++++|+++.++++++
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~---~~~~~-------~~~~~~~~~~Dl~~~~~~~~~   74 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGS---KVAKA-------LGENAWFIAMDVADEAQVAAG   74 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHH---HHHHH-------cCCceEEEEccCCCHHHHHHH
Confidence            45689999999999999999999999999999999988743322   21111       234678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.++++++|+||||||.... ..++.+.+.++|+..+++|+.+++++++++.|.|++ .++||++||..+..+.+. 
T Consensus        75 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~  154 (255)
T PRK05717         75 VAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDT  154 (255)
T ss_pred             HHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCC
Confidence            99999999999999999998643 256778899999999999999999999999999855 589999999887665433 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   ++.++.++.. +|+||+|+||+++|++.................+.++..+|+|++..+.+|+++. 
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-  232 (255)
T PRK05717        155 EAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ-  232 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCch-
Confidence                         5777888776 4999999999999987543222222222233567788999999999999999877 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|+.+.+|
T Consensus       233 ~~~~~g~~~~~~  244 (255)
T PRK05717        233 AGFVTGQEFVVD  244 (255)
T ss_pred             hcCccCcEEEEC
Confidence            779999999876

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=236.66  Aligned_cols=227  Identities=35%  Similarity=0.487  Sum_probs=190.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +..+++|++||||++++||++++++|+++|++|++++|+...   +....+++..    .+.++.++.+|++++++++++
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~   74 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAE---ARELAAALEA----AGGRAHAIAADLADPASVQRF   74 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            456889999999999999999999999999999999887433   3333333332    345788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||+|.... .++.+.+.++|+..+++|+.+++++++.+.++|.+  .+++|++||..+..+.+. 
T Consensus        75 ~~~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  153 (250)
T PRK12939         75 FDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKL  153 (250)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCc
Confidence            99999999999999999998654 67778899999999999999999999999999866  679999999876655432 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   ++.++.++.+.+|+|+.|+||++.|++............+....+..++.+++|+++++++++++. 
T Consensus       154 ~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  232 (250)
T PRK12939        154 GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDA-  232 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc-
Confidence                         578888888899999999999999998755333244445556678888999999999999999877 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|++|.+|
T Consensus       233 ~~~~~G~~i~~~  244 (250)
T PRK12939        233 ARFVTGQLLPVN  244 (250)
T ss_pred             ccCccCcEEEEC
Confidence            789999999987

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=234.53  Aligned_cols=209  Identities=18%  Similarity=0.227  Sum_probs=171.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +++||+++||||++|||++++++|+++|++|++++|+..   .+.+..+++.+    .+.++..+.+|++++++++++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~---~l~~~~~~i~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQS---ALKDTYEQCSA----LTDNVYSFQLKDFSQESIRHLFD   74 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH---HHHHHHHHHHh----cCCCeEEEEccCCCHHHHHHHHH
Confidence            578999999999999999999999999999999999754   34444444433    34567888999999999999999


Q ss_pred             HHHHhcC-CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          119 EVVNAYG-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       119 ~~~~~~g-~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++.++++ ++|++|||||......++.+.+.++|.+.+++|+.+++.+++.++|+|++   +|+||++||..+..+... 
T Consensus        75 ~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~Y  154 (227)
T PRK08862         75 AIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQDLTGV  154 (227)
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCcchh
Confidence            9999998 99999999986554567888999999999999999999999999999964   489999999865533222 


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.|++++||+||+|+||++.|+..   ..++..+..           -+|++.++.||++   +.+
T Consensus       155 ~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~---~~~~~~~~~-----------~~~~~~~~~~l~~---~~~  217 (227)
T PRK08862        155 ESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGE---LDAVHWAEI-----------QDELIRNTEYIVA---NEY  217 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCc---cCHHHHHHH-----------HHHHHhheeEEEe---ccc
Confidence                      7899999999999999999999999842   112211111           1799999999997   559


Q ss_pred             ccceeecc
Q 039897          264 ITGQVLHP  271 (272)
Q Consensus       264 ~tG~~i~i  271 (272)
                      +||+.|..
T Consensus       218 ~tg~~~~~  225 (227)
T PRK08862        218 FSGRVVEA  225 (227)
T ss_pred             ccceEEee
Confidence            99998864

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-33  Score=237.44  Aligned_cols=225  Identities=33%  Similarity=0.536  Sum_probs=188.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +++++++|||||+|+||.+++++|+++|++|++++|+....+.+   ...+.     .+.++.++.+|++++++++++++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   73 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERV---AAEIL-----AGGRAIAVAADVSDEADVEAAVA   73 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHh-----cCCeEEEEECCCCCHHHHHHHHH
Confidence            57899999999999999999999999999999999985443332   22222     14567889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||+|......++.+.+.++|++.+++|+.+++.+++.+.++|++  .++||++||..+..+.+.   
T Consensus        74 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  153 (251)
T PRK07231         74 AALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGW  153 (251)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchH
Confidence            999999999999999998655567788899999999999999999999999999964  478999999877665443   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC---HHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS---EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                 ++.++.++.+.||++++++||++.|++......   .+....+....+.+++.+++|+|+++++|+++.
T Consensus       154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (251)
T PRK07231        154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDE  233 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence                       578888888889999999999999998654332   133334556677888899999999999999887


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       ..+++|+++.+|
T Consensus       234 -~~~~~g~~~~~~  245 (251)
T PRK07231        234 -ASWITGVTLVVD  245 (251)
T ss_pred             -ccCCCCCeEEEC
Confidence             789999999887

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-33  Score=238.15  Aligned_cols=227  Identities=28%  Similarity=0.459  Sum_probs=185.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ++++++|++|||||++|||.+++++|+++|++|++++|+.+.   +.+..+++..    ...++.++.+|++++++++++
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dv~~~~~i~~~   76 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEK---VDAAVAQLQQ----AGPEGLGVSADVRDYAAVEAA   76 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHH----hCCceEEEECCCCCHHHHHHH
Confidence            467899999999999999999999999999999999997443   3333333332    344668899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh--
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~--  193 (272)
                      ++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|++ +|+|+++||..+..+.+.  
T Consensus        77 ~~~~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~  155 (264)
T PRK07576         77 FAQIADEFGPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQA  155 (264)
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCcc
Confidence            9999999999999999999754 357788899999999999999999999999999864 579999999876554432  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEeccccc-CCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIW-TPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~-t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                  +++++.++.++||+|++|+||+++ |+......+. .....+....|+++..+|+|+|+.+++|+++.
T Consensus       156 ~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  235 (264)
T PRK07576        156 HVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDM  235 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence                        678889999999999999999997 5533322222 22223334567788889999999999999887


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       ..+++|+.+.+|
T Consensus       236 -~~~~~G~~~~~~  247 (264)
T PRK07576        236 -ASYITGVVLPVD  247 (264)
T ss_pred             -hcCccCCEEEEC
Confidence             889999999876

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=236.15  Aligned_cols=222  Identities=32%  Similarity=0.498  Sum_probs=183.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|++|||||+++||++++++|+++|++|++++|+..   .+.+..++       .+.++.++++|+++.+++.++++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~---~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   72 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPA---SLEAARAE-------LGESALVIRADAGDVAAQKALAQ   72 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHH---HHHHHHHH-------hCCceEEEEecCCCHHHHHHHHH
Confidence            578999999999999999999999999999999988732   23222222       24567789999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.|+|++++++++++|..+..+.+.     
T Consensus        73 ~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~  151 (249)
T PRK06500         73 ALAEAFGRLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYA  151 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHH
Confidence            99999999999999999854 356778899999999999999999999999999987789999999766554333     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-----CCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-----FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                               +++++.|+.++||++++|+||+++|++....     .............|..+..+|+|++++++||+++.
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        152 ASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence                     6788888888999999999999999975321     11122233445567788889999999999999887


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       ..+++|+.|.+|
T Consensus       232 -~~~~~g~~i~~~  243 (249)
T PRK06500        232 -SAFIVGSEIIVD  243 (249)
T ss_pred             -ccCccCCeEEEC
Confidence             789999999887

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.4e-33  Score=234.64  Aligned_cols=224  Identities=27%  Similarity=0.360  Sum_probs=184.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|++||||+++|||++++++|+++|++|++..++.  .....+..+++..    .+.++..+.+|+++.+++.+++++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~   74 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPN--SPRRVKWLEDQKA----LGFDFIASEGNVGDWDSTKAAFDK   74 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCC--hHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            5689999999999999999999999999988854421  2233333444432    355678889999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.+.|++.  ++||++||..+..+.+.    
T Consensus        75 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y  153 (246)
T PRK12938         75 VKAEVGEIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNY  153 (246)
T ss_pred             HHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhH
Confidence            9999999999999999854 3577888999999999999999999999999998653  68999999876655432    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.++...||++|+|+||++.|++.... .++..+......+..+..+++|+++.+.||+++. ..+
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~-~~~  231 (246)
T PRK12938        154 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI-RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEE-SGF  231 (246)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc-ChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcc-cCC
Confidence                      5678888888999999999999999987542 3333344445567788899999999999999987 889


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      ++|+++.+|
T Consensus       232 ~~g~~~~~~  240 (246)
T PRK12938        232 STGADFSLN  240 (246)
T ss_pred             ccCcEEEEC
Confidence            999999886

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-33  Score=243.55  Aligned_cols=223  Identities=28%  Similarity=0.383  Sum_probs=178.6

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..+++||++|||||++|||++++++|+++|++|++++++..  ....+..+++..    .+.++.++.+|+++.+++.+
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~--~~~~~~~~~i~~----~g~~~~~~~~Dv~d~~~~~~   79 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASA--LDASDVLDEIRA----AGAKAVAVAGDISQRATADE   79 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCch--hHHHHHHHHHHh----cCCeEEEEeCCCCCHHHHHH
Confidence            346799999999999999999999999999999999987532  233444444543    45678899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---------CCeEEEecCCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---------GSAIINTTSVE  186 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---------~g~iv~vsS~~  186 (272)
                      +++.+.+ +|++|+||||||+... ..+.+.+.++|+..+++|+.+++++++++.++|++         .|+||++||.+
T Consensus        80 ~~~~~~~-~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  157 (306)
T PRK07792         80 LVATAVG-LGGLDIVVNNAGITRD-RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEA  157 (306)
T ss_pred             HHHHHHH-hCCCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcc
Confidence            9999998 9999999999998653 56788899999999999999999999999998853         26999999987


Q ss_pred             CccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhh
Q 039897          187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       187 ~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                      +..+.+.              ++.++.|+.++||+||+|+|| +.|+|.............    ......+|+|+++.+
T Consensus       158 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~~~----~~~~~~~pe~va~~v  232 (306)
T PRK07792        158 GLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVEA----GGIDPLSPEHVVPLV  232 (306)
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchhhh----hccCCCCHHHHHHHH
Confidence            7655432              678899999999999999999 478875332211000000    112234799999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      .||+++. ..++||+++.+|
T Consensus       233 ~~L~s~~-~~~~tG~~~~v~  251 (306)
T PRK07792        233 QFLASPA-AAEVNGQVFIVY  251 (306)
T ss_pred             HHHcCcc-ccCCCCCEEEEc
Confidence            9999987 779999999876

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=3.5e-33  Score=233.84  Aligned_cols=216  Identities=34%  Similarity=0.484  Sum_probs=174.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..|++|++|||||++|||++++++|+++|++|++++++..  +...+...+         ..+.++.+|+++.+++.+++
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~--~~~~~l~~~---------~~~~~~~~D~~~~~~~~~~~   70 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK--DAAERLAQE---------TGATAVQTDSADRDAVIDVV   70 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCH--HHHHHHHHH---------hCCeEEecCCCCHHHHHHHH
Confidence            3578999999999999999999999999999998876422  222221111         12467889999998887776


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc-cCChh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL-WHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~-~~~~~---  193 (272)
                      +    .++++|++|||||... ..+..+.+.++|++.+++|+.+++++++.+.+.|++.++||++||..+. .+.+.   
T Consensus        71 ~----~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  145 (237)
T PRK12742         71 R----KSGALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAA  145 (237)
T ss_pred             H----HhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcc
Confidence            5    3578999999999854 3566778899999999999999999999999999888999999998763 23222   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 ++.++.++.++||+||+|+||+++|++.....  +..+......++++..+|+|+++.+.||+++. +.
T Consensus       146 Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~-~~  222 (237)
T PRK12742        146 YAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPE-AS  222 (237)
T ss_pred             hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc-cC
Confidence                       67889999999999999999999999864321  22233445567888999999999999999988 88


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      ++||++|.+|
T Consensus       223 ~~~G~~~~~d  232 (237)
T PRK12742        223 FVTGAMHTID  232 (237)
T ss_pred             cccCCEEEeC
Confidence            9999999987

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=243.25  Aligned_cols=221  Identities=23%  Similarity=0.342  Sum_probs=181.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+++||++|||||++|||++++++|+++|++|++++|+...   +.+..+++.     ...++..+.+|+++.++++++
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---l~~~~~~l~-----~~~~~~~~~~Dv~d~~~v~~~   75 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE---LAALAAELG-----GDDRVLTVVADVTDLAAMQAA   75 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhc-----CCCcEEEEEecCCCHHHHHHH
Confidence            356899999999999999999999999999999999997433   333333331     234566778999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh--
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~--  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|.+ .|+||++||..+..+.+.  
T Consensus        76 ~~~~~~~~g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  154 (296)
T PRK05872         76 AEEAVERFGGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMA  154 (296)
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCch
Confidence            9999999999999999999854 578889999999999999999999999999999854 689999999887766543  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccC--CCCCCCCCccchhhhhhhhhcc
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSE--VPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                  +++++.|+.++||+||+++||+++|++....... +....+...  .|.++..+++|+++.++++++.
T Consensus       155 ~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~  234 (296)
T PRK05872        155 AYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIER  234 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhc
Confidence                        6788999999999999999999999987543322 222222222  3567888999999999999988


Q ss_pred             CCCCcccce
Q 039897          259 HCSSYITGQ  267 (272)
Q Consensus       259 ~~~~~~tG~  267 (272)
                      . ..+++|.
T Consensus       235 ~-~~~i~~~  242 (296)
T PRK05872        235 R-ARRVYAP  242 (296)
T ss_pred             C-CCEEEch
Confidence            7 7777765

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=237.29  Aligned_cols=225  Identities=32%  Similarity=0.433  Sum_probs=182.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|+||++|||||++|||++++++|+++|++|++++|+....    +..+++..    .+.++.++.+|++++++++++
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~   73 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD----EFAEELRA----LQPRAEFVQVDLTDDAQCRDA   73 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH----HHHHHHHh----cCCceEEEEccCCCHHHHHHH
Confidence            3579999999999999999999999999999999999875433    33334433    355688999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh--
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~--  193 (272)
                      ++++.+.++++|+||||||.... ..+.... ++|++.+++|+.+++++++.+.|.|++ .++|+++||..+..+.+.  
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~-~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~  151 (258)
T PRK08628         74 VEQTVAKFGRIDGLVNNAGVNDG-VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTS  151 (258)
T ss_pred             HHHHHHhcCCCCEEEECCcccCC-CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCc
Confidence            99999999999999999997442 3455444 999999999999999999999999865 579999999876655432  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---C--HHHHHhhccCCCCC-CCCCccchhhhhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---S--EEESAQFGSEVPMK-RAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---~--~~~~~~~~~~~~~~-~~~~~~dva~~~~~L  255 (272)
                                  +++++.|+.++||+||.|+||.++|++.....   .  .+.........+.+ ++.+|+|+|+.++||
T Consensus       152 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  231 (258)
T PRK08628        152 GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFL  231 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHH
Confidence                        67888888889999999999999999753311   1  11222233344553 788999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. ..+++|+.+.+|
T Consensus       232 ~~~~-~~~~~g~~~~~~  247 (258)
T PRK08628        232 LSER-SSHTTGQWLFVD  247 (258)
T ss_pred             hChh-hccccCceEEec
Confidence            9987 889999999886

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=236.62  Aligned_cols=224  Identities=25%  Similarity=0.370  Sum_probs=182.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||+++||.+++++|+++|++|++++|+....   ++..+.+....  ...++.++.+|+++++++.++++++.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~---~~~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~   76 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKA---ANVAQEINAEY--GEGMAYGFGADATSEQSVLALSRGVD   76 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHHHHHhc--CCceeEEEEccCCCHHHHHHHHHHHH
Confidence            78999999999999999999999999999999874433   33333333210  12468899999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-----
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +.++++|++|||||... ..++.+.+.++|++.+++|+.+++++++++.+.|++   .++||++||..+..+.+.     
T Consensus        77 ~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  155 (259)
T PRK12384         77 EIFGRVDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYS  155 (259)
T ss_pred             HHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhH
Confidence            99999999999999854 367888999999999999999999999999999854   369999999765544322     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccc-cCCCCCCCC----------CHHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPI-WTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v-~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                               +++++.|++++||+||+|+||.+ .|++.....          .++..+.+.+..+++++.+++|++++++
T Consensus       156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~  235 (259)
T PRK12384        156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence                     67889999999999999999975 666543211          1223334556788999999999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      ||+++. +.+++|++|++|
T Consensus       236 ~l~~~~-~~~~~G~~~~v~  253 (259)
T PRK12384        236 FYASPK-ASYCTGQSINVT  253 (259)
T ss_pred             HHcCcc-cccccCceEEEc
Confidence            999887 789999999987

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-33  Score=232.94  Aligned_cols=224  Identities=32%  Similarity=0.539  Sum_probs=183.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||+++||.+++++|+++|++|++++++..  +......+.+..    .+.++.++.+|+++.++++++++++.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNR--DAAEAVVQAIRR----QGGEALAVAADVADEADVLRLFEAVD   75 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCH--HHHHHHHHHHHh----CCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            579999999999999999999999999988875432  233333333432    34567889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCccCChh---
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~~~~~---  193 (272)
                      +.++++|+||||||......++.+.+.++|++.+++|+.+++++++++++.|++     .|+||++||.++..+.+.   
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  155 (248)
T PRK06123         76 RELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYI  155 (248)
T ss_pred             HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCcc
Confidence            999999999999998654456778899999999999999999999999999853     368999999866544321   


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.++.++||+|++|+||.+.|++......+..........|+.+..+++|+++++++|+++. .
T Consensus       156 ~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~-~  234 (248)
T PRK06123        156 DYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDE-A  234 (248)
T ss_pred             chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-c
Confidence                        567888988899999999999999997543333333444555678888889999999999999887 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|+++++|
T Consensus       235 ~~~~g~~~~~~  245 (248)
T PRK06123        235 SYTTGTFIDVS  245 (248)
T ss_pred             cCccCCEEeec
Confidence            79999999886

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-33  Score=234.83  Aligned_cols=228  Identities=28%  Similarity=0.430  Sum_probs=177.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc-hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ-EEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++++|++|||||++|||.+++++|+++|++|+++.++.. ..+.+.+..+++..    .+.++.++++|++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~   79 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA----AGAKAVAFQADLTTAAAVEKL   79 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHH----hCCcEEEEecCcCCHHHHHHH
Confidence            3578999999999999999999999999999777765433 33444444444433    345688899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe-cCCCCcc-CChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT-TSVEPLW-HSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v-sS~~~~~-~~~~-  193 (272)
                      ++.+.+.++++|++|||||... ..++.+.+.++|++++++|+.+++++++++.|.|++.++++++ +|..+.. +... 
T Consensus        80 ~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~  158 (257)
T PRK12744         80 FDDAKAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSA  158 (257)
T ss_pred             HHHHHHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCccc
Confidence            9999999999999999999854 3677888999999999999999999999999999887888876 4443221 1101 


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHH---hhccCCCCC--CCCCccchhhhhhhhhc
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA---QFGSEVPMK--RAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~dva~~~~~L~s  257 (272)
                                 +++++.|+.++||+||+|+||++.|++.......+...   ......++.  +..+|+|+++.+.||++
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  238 (257)
T PRK12744        159 YAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT  238 (257)
T ss_pred             chhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhc
Confidence                       78999999999999999999999999763322221111   111122332  67899999999999998


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +  ..+++|+++.+|
T Consensus       239 ~--~~~~~g~~~~~~  251 (257)
T PRK12744        239 D--GWWITGQTILIN  251 (257)
T ss_pred             c--cceeecceEeec
Confidence            4  569999999887

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.6e-33  Score=234.73  Aligned_cols=217  Identities=26%  Similarity=0.346  Sum_probs=183.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++||||++++||++++++|+++|++|++++|+.            +..    .+.++.++++|+++++++++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------------~~~----~~~~~~~~~~D~~~~~~~~~~~   67 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------------LTQ----EDYPFATFVLDVSDAAAVAQVC   67 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------------hhh----cCCceEEEEecCCCHHHHHHHH
Confidence            568999999999999999999999999999999999874            011    3556888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||+|... ..++.+.+.++++..+++|+.+++++++++.+.|++  .++||++||..+..+.+.  
T Consensus        68 ~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~  146 (252)
T PRK08220         68 QRLLAETGPLDVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMA  146 (252)
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCc
Confidence            999999999999999999854 467888899999999999999999999999999864  478999999876544322  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHH---------HHHhhccCCCCCCCCCccchhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE---------ESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                                  ++.++.|+.++||+||+|.||++.|++........         ..+.+....|.+++.+|+|+|+++
T Consensus       147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  226 (252)
T PRK08220        147 AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAV  226 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHH
Confidence                        67889999999999999999999999754322111         122344556788899999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+++. ..+++|++|.+|
T Consensus       227 ~~l~~~~-~~~~~g~~i~~~  245 (252)
T PRK08220        227 LFLASDL-ASHITLQDIVVD  245 (252)
T ss_pred             HHHhcch-hcCccCcEEEEC
Confidence            9999987 889999999887

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.5e-35  Score=223.31  Aligned_cols=219  Identities=26%  Similarity=0.312  Sum_probs=185.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|.|+++++||+.-|||++++..|++.|++|+.+.|++++...+   ..+       ...-+..+..|+++.+.+.+.
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sL---V~e-------~p~~I~Pi~~Dls~wea~~~~   71 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSL---VKE-------TPSLIIPIVGDLSAWEALFKL   71 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHH---Hhh-------CCcceeeeEecccHHHHHHHh
Confidence            4568999999999999999999999999999999999985543333   222       344488899999987766655


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHH----HHhccccCCeEEEecCCCCccCCh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRH----SLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~----~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      +.    ..+.+|.+|||||+.. ..+|.+++.++|++.|++|+.+.+++.|.    ++++.. .|.||++||.++.++..
T Consensus        72 l~----~v~pidgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~-~GaIVNvSSqas~R~~~  145 (245)
T KOG1207|consen   72 LV----PVFPIDGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI-KGAIVNVSSQASIRPLD  145 (245)
T ss_pred             hc----ccCchhhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC-CceEEEecchhcccccC
Confidence            54    3478999999999955 58999999999999999999999999998    444433 46799999998877654


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCC-CCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      +              ++++|.|+++++||||+++|..|-|+|-+. +.++.....+..++|++++...+++.++++||+|
T Consensus       146 nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLS  225 (245)
T KOG1207|consen  146 NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLS  225 (245)
T ss_pred             CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeee
Confidence            4              799999999999999999999999998754 3445666678899999999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.+.||+.+.+|
T Consensus       226 d~-ssmttGstlpve  239 (245)
T KOG1207|consen  226 DN-SSMTTGSTLPVE  239 (245)
T ss_pred             cC-cCcccCceeeec
Confidence            98 999999999875

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=231.64  Aligned_cols=224  Identities=34%  Similarity=0.553  Sum_probs=181.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .|++|||||++|||.+++++|+++|++|+++.+++  .+.+.+...++..    .+.++.++++|++++++++++++++.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARD--AAAAEETADAVRA----AGGRACVVAGDVANEADVIAMFDAVQ   75 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHh----cCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            47999999999999999999999999998876543  2333333444433    45578899999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCccCChh---
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~~~~~---  193 (272)
                      +.++++|+||||||......++.+.+.++|+..+++|+.+++.+++.+++.|..     .++||++||.++..+.+.   
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~  155 (248)
T PRK06947         76 SAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYV  155 (248)
T ss_pred             HhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCc
Confidence            999999999999998655456788899999999999999999999999998743     367999999765433221   


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.++.++||+|+.|+||+++|++.......+.........|..+..+++|+++.+++|+++. .
T Consensus       156 ~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~-~  234 (248)
T PRK06947        156 DYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDA-A  234 (248)
T ss_pred             ccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc-c
Confidence                        578888888899999999999999998643222222233445567778889999999999999887 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|++|.+|
T Consensus       235 ~~~~G~~~~~~  245 (248)
T PRK06947        235 SYVTGALLDVG  245 (248)
T ss_pred             cCcCCceEeeC
Confidence            89999999887

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=7.8e-33  Score=231.84  Aligned_cols=211  Identities=20%  Similarity=0.214  Sum_probs=173.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||++|||++++++|+++|++|++++|+...   .   .+.+..    .  ++.++.+|+++.++++++++++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~---~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~   69 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP---A---IDGLRQ----A--GAQCIQADFSTNAGIMAFIDELK   69 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh---H---HHHHHH----c--CCEEEEcCCCCHHHHHHHHHHHH
Confidence            6799999999999999999999999999999997532   1   122221    1  26788999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----CCeEEEecCCCCccCChh----
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.++++|++|||||.... ....+.+.++|++++++|+.+++.+++.+.+.|++    .++||++||..+..+.+.    
T Consensus        70 ~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  148 (236)
T PRK06483         70 QHTDGLRAIIHNASDWLA-EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAY  148 (236)
T ss_pred             hhCCCccEEEECCccccC-CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccH
Confidence            999999999999998543 34567789999999999999999999999999965    368999999876544432    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.|+++ +||||+|+||++.|+..   ..++..+......++++...|+|+++.+.||++   +.+
T Consensus       149 ~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~---~~~  221 (236)
T PRK06483        149 AASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEG---DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT---SCY  221 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCC---CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc---CCC
Confidence                      6888999987 59999999999977542   122333344456788889999999999999997   459


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      +||++|.+|
T Consensus       222 ~~G~~i~vd  230 (236)
T PRK06483        222 VTGRSLPVD  230 (236)
T ss_pred             cCCcEEEeC
Confidence            999999887

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.6e-33  Score=232.44  Aligned_cols=211  Identities=29%  Similarity=0.435  Sum_probs=174.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|+++|||+++|||++++++|+++|++|++++|+....                ...++.++.+|++++      ++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~~~D~~~~------~~   59 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD----------------LSGNFHFLQLDLSDD------LE   59 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCCcEEEEECChHHH------HH
Confidence            58899999999999999999999999999999999874321                133577889999886      45


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+.   
T Consensus        60 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  139 (235)
T PRK06550         60 PLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAA  139 (235)
T ss_pred             HHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcc
Confidence            555566899999999998544457788899999999999999999999999999865  479999999876654432   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                 +++++.++.++||+||+|+||+++|++....+.+ ..........|.++..+|+|+|+.++||+++. .
T Consensus       140 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~-~  218 (235)
T PRK06550        140 YTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGK-A  218 (235)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChh-h
Confidence                       6788999999999999999999999986544332 22233445678888999999999999999988 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|+++.+|
T Consensus       219 ~~~~g~~~~~~  229 (235)
T PRK06550        219 DYMQGTIVPID  229 (235)
T ss_pred             ccCCCcEEEEC
Confidence            89999999887

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=231.52  Aligned_cols=227  Identities=30%  Similarity=0.450  Sum_probs=187.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||+++||.+++++|+++|++|++++|+......+   .+++..    ...+..++.+|+++.+++++++
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~---~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~   74 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERV---AKQIVA----DGGTAIAVQVDVSDPDSAKAMA   74 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHh----cCCcEEEEEcCCCCHHHHHHHH
Confidence            457899999999999999999999999999999999974433333   233322    3446778899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCC--CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYK--AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +.+.+.++++|+||||||+...  ..++.+.+.++|++.+++|+.++++++++++++|.+  .++||++||..++.+...
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  154 (250)
T PRK07774         75 DATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNF  154 (250)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCccc
Confidence            9999999999999999998532  246677889999999999999999999999999855  579999999876644322


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 +++++.++...||+++.++||.++|++.....+...........+.....+++|+++.+++++++. ..
T Consensus       155 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~-~~  233 (250)
T PRK07774        155 YGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDE-AS  233 (250)
T ss_pred             cHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh-hh
Confidence                       678888888889999999999999998765555555445556667777889999999999999876 66


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      +.+|+++++|
T Consensus       234 ~~~g~~~~v~  243 (250)
T PRK07774        234 WITGQIFNVD  243 (250)
T ss_pred             CcCCCEEEEC
Confidence            7899999875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-32  Score=231.45  Aligned_cols=224  Identities=29%  Similarity=0.423  Sum_probs=183.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      |.++++|||||++|||++++++|+++|++|+++ .|+.   +...+..+++..    .+.++.++.+|+++++++.++++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSR---KAAEETAEEIEA----LGRKALAVKANVGDVEKIKEMFA   74 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHH
Confidence            578999999999999999999999999998774 5553   233333444433    35678889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||+|... ..++.+.+.++|+..+++|+.+++++++++.++|++  .++||++||..+..+.+.   
T Consensus        75 ~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  153 (250)
T PRK08063         75 QIDEEFGRLDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTT  153 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccH
Confidence            99999999999999999854 467888999999999999999999999999999965  479999999866544332   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                 +++++.++.+.||++|+|+||++.|++...... .+.........+.++..+++|+|+.+++++++. .
T Consensus       154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~-~  232 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPE-A  232 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCch-h
Confidence                       678888888899999999999999998643222 222333444566777889999999999999887 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|+++.+|
T Consensus       233 ~~~~g~~~~~~  243 (250)
T PRK08063        233 DMIRGQTIIVD  243 (250)
T ss_pred             cCccCCEEEEC
Confidence            78999999886

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-33  Score=236.97  Aligned_cols=218  Identities=23%  Similarity=0.340  Sum_probs=178.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhh----HHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD----AQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      +++++|++|||||++|||.+++++|+++|++|++++|+......    +.+..+++..    .+.++.++.+|+++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~D~~~~~~i   77 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA----AGGQALPLVGDVRDEDQV   77 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh----cCCceEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999997643222    2233333332    456788999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS  191 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~  191 (272)
                      .++++.+.+.++++|+||||||... ..++.+.+.++|++++++|+.+++++++++.|+|++  +++|++++|..+..+.
T Consensus        78 ~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  156 (273)
T PRK08278         78 AAAVAKAVERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK  156 (273)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc
Confidence            9999999999999999999999854 467788899999999999999999999999999965  4789999997655443


Q ss_pred             --hh--------------HHHHHHHHhhCCeEEEEEecc-cccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          192 --PE--------------ARGLALQLVERGIRVNGVAPG-PIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       192 --~~--------------~~~la~e~~~~gi~vn~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                        +.              +++++.|+.++||+||+|+|| +++|++......        ...+..+..+|+++|+.+++
T Consensus       157 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~--------~~~~~~~~~~p~~va~~~~~  228 (273)
T PRK08278        157 WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG--------GDEAMRRSRTPEIMADAAYE  228 (273)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc--------ccccccccCCHHHHHHHHHH
Confidence              21              688899999999999999999 578876432111        12234567799999999999


Q ss_pred             hhccCCCCcccceee
Q 039897          255 LACNHCSSYITGQVL  269 (272)
Q Consensus       255 L~s~~~~~~~tG~~i  269 (272)
                      |+++. ..++||+++
T Consensus       229 l~~~~-~~~~~G~~~  242 (273)
T PRK08278        229 ILSRP-AREFTGNFL  242 (273)
T ss_pred             HhcCc-cccceeEEE
Confidence            99987 789999987

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.8e-32  Score=230.50  Aligned_cols=222  Identities=29%  Similarity=0.420  Sum_probs=183.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||+++||++++++|+++|+.|++.+++...   ++.....       .+.++.++.+|+++.+++++++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~---~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~   71 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEK---LEALAAE-------LGERVKIFPANLSDRDEVKALG   71 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHH-------hCCceEEEEccCCCHHHHHHHH
Confidence            36789999999999999999999999999999888876433   2222221       2346788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||.... .++.+.+.++|++.+++|+.+++++++++.+.|++  .++||++||..+..+.+.  
T Consensus        72 ~~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  150 (245)
T PRK12936         72 QKAEADLEGVDILVNNAGITKD-GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQA  150 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCCCC-CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCc
Confidence            9999999999999999998543 56777889999999999999999999999987743  579999999876655443  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  ++.++.++.+.||++++|+||+++|++.... .+...+......+..+..+++|+++.+.||+++. .
T Consensus       151 ~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~-~  228 (245)
T PRK12936        151 NYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSE-A  228 (245)
T ss_pred             chHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc-ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc-c
Confidence                        5678888888999999999999999986443 3333333445677888899999999999999876 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|++|++|
T Consensus       229 ~~~~G~~~~~~  239 (245)
T PRK12936        229 AYVTGQTIHVN  239 (245)
T ss_pred             cCcCCCEEEEC
Confidence            79999999886

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.6e-32  Score=230.20  Aligned_cols=218  Identities=28%  Similarity=0.424  Sum_probs=180.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      +|||||++|||.++++.|+++|++|++++++..  +......+++..    .+.++.++.+|+++.+++.++++++.+.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGR--SDAESVVSAIQA----QGGNARLLQFDVADRVACRTLLEADIAEH   74 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHHHH----cCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999987532  233333444433    35678899999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH-hccc--cCCeEEEecCCCCccCChh--------
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSL-RHMN--EGSAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~--~~g~iv~vsS~~~~~~~~~--------  193 (272)
                      +++|++|||+|.... .++.+.+.++|+.++++|+.++++++++++ |.++  +.++||++||.++..+.+.        
T Consensus        75 ~~i~~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  153 (239)
T TIGR01831        75 GAYYGVVLNAGITRD-AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAK  153 (239)
T ss_pred             CCCCEEEECCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHH
Confidence            999999999998543 567788999999999999999999999875 5543  3579999999877666443        


Q ss_pred             ------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccce
Q 039897          194 ------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQ  267 (272)
Q Consensus       194 ------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~  267 (272)
                            +++++.|+.++||+||+|+||+++|++.... . +..+......|+++..+|+|+++.++||+++. +.+++|+
T Consensus       154 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~~~~~g~  230 (239)
T TIGR01831       154 AGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV-E-HDLDEALKTVPMNRMGQPAEVASLAGFLMSDG-ASYVTRQ  230 (239)
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh-h-HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch-hcCccCC
Confidence                  5788999999999999999999999987542 2 22333445678899999999999999999988 8999999


Q ss_pred             eeccC
Q 039897          268 VLHPN  272 (272)
Q Consensus       268 ~i~id  272 (272)
                      ++.+|
T Consensus       231 ~~~~~  235 (239)
T TIGR01831       231 VISVN  235 (239)
T ss_pred             EEEec
Confidence            99887

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-32  Score=230.77  Aligned_cols=224  Identities=32%  Similarity=0.468  Sum_probs=182.9

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccch--------hhhHHHHHHHHHHhhhcCCCCceEEeccCC
Q 039897           39 KLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQE--------EKDAQETLEILREAKTSDAKDPMAISADLG  108 (272)
Q Consensus        39 ~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (272)
                      .+++|++|||||++  |||.+++++|+++|++|++++|++.+        .........++..    .+.++.++.+|++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~   77 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES----YGVRCEHMEIDLS   77 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh----cCCeEEEEECCCC
Confidence            47889999999994  99999999999999999999987221        1111112222222    4557889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCC
Q 039897          109 FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVE  186 (272)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~  186 (272)
                      +++++.++++.+.+.++++|+||||||+.. ..++.+.+.+++++.+++|+.+++++++++.+.|.+  .++||++||..
T Consensus        78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~  156 (256)
T PRK12748         78 QPYAPNRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQ  156 (256)
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCcc
Confidence            999999999999999999999999999854 467888899999999999999999999999999864  47999999987


Q ss_pred             CccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhh
Q 039897          187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       187 ~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                      +..+.+.              +++++.++..+||+|++|+||+++|++...    +....+....+..+...|+|+++.+
T Consensus       157 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  232 (256)
T PRK12748        157 SLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE----ELKHHLVPKFPQGRVGEPVDAARLI  232 (256)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh----hHHHhhhccCCCCCCcCHHHHHHHH
Confidence            7655432              578888998899999999999999987532    2222333455667788999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      .||+++. ..+++|+++++|
T Consensus       233 ~~l~~~~-~~~~~g~~~~~d  251 (256)
T PRK12748        233 AFLVSEE-AKWITGQVIHSE  251 (256)
T ss_pred             HHHhCcc-cccccCCEEEec
Confidence            9999987 789999999987

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=232.61  Aligned_cols=227  Identities=27%  Similarity=0.386  Sum_probs=184.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.++++|++|||||+++||++++++|+++|++|++++|++...+..   .+++..    .+.++.++.+|+++.++++++
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~---~~~~~~----~~~~~~~~~~Dl~~~~~~~~~   74 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAV---ADEINK----AGGKAIGVAMDVTNEDAVNAG   74 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH---HHHHHh----cCceEEEEECCCCCHHHHHHH
Confidence            4568899999999999999999999999999999999985443333   333332    355678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc-cc--CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM-NE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      ++.+.+.++.+|+||||+|... ..++.+.+.++++..+++|+.+++.+++.+++.| ++  .++||++||..+..+.+.
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~  153 (262)
T PRK13394         75 IDKVAERFGSVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL  153 (262)
T ss_pred             HHHHHHHcCCCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC
Confidence            9999999999999999999854 3567778899999999999999999999999999 44  479999999866554332


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH----------HH-HHhhccCCCCCCCCCccch
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE----------EE-SAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~dv  248 (272)
                                    ++.++.++.+.+|++|+|.||++.|++....+..          +. ...+....+.+++.+++|+
T Consensus       154 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  233 (262)
T PRK13394        154 KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDV  233 (262)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHH
Confidence                          5788888888899999999999999875432211          11 1123345566788999999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++++++++.. ...++|++|++|
T Consensus       234 a~a~~~l~~~~-~~~~~g~~~~~~  256 (262)
T PRK13394        234 AQTVLFLSSFP-SAALTGQSFVVS  256 (262)
T ss_pred             HHHHHHHcCcc-ccCCcCCEEeeC
Confidence            99999999887 778999999887

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=6.2e-33  Score=235.35  Aligned_cols=221  Identities=18%  Similarity=0.227  Sum_probs=174.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----cCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYAL----EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~----~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++|||||++|||++++++|++    .|++|++++|+...   +.+..+++...  ..+.++.++.+|++++++++++++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~---~~~~~~~l~~~--~~~~~v~~~~~Dl~~~~~v~~~~~~   76 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEA---LRQLKAEIGAE--RSGLRVVRVSLDLGAEAGLEQLLKA   76 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHH---HHHHHHHHHhc--CCCceEEEEEeccCCHHHHHHHHHH
Confidence            689999999999999999997    79999999998443   44444444321  1244678899999999999999999


Q ss_pred             HHHhcCCc----cEEEEcccccCCCC-Cccc-CCHHHHHHHHHhhhHHHHHHHHHHHhcccc----CCeEEEecCCCCcc
Q 039897          120 VVNAYGKI----DILVNNAAVQYKAG-SVEE-IDEERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLW  189 (272)
Q Consensus       120 ~~~~~g~l----d~vI~~ag~~~~~~-~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~g~iv~vsS~~~~~  189 (272)
                      +.+.++.+    |+||||||...... ...+ .+.++|++.+++|+.+++.+++.++|.|++    .++||++||..+..
T Consensus        77 ~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~  156 (256)
T TIGR01500        77 LRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ  156 (256)
T ss_pred             HHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC
Confidence            98877643    69999999753322 2332 357899999999999999999999999864    36899999988766


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----CCHHHHHhhccCCCCCCCCCccchhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----FSEEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                      +.+.              +++++.|++++||+||+|+||+++|++....    ..++..+.+....|.++..+|+|+|+.
T Consensus       157 ~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~  236 (256)
T TIGR01500       157 PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQK  236 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHH
Confidence            5443              6889999999999999999999999986421    122333345556788899999999999


Q ss_pred             hhhhhccCCCCcccceeecc
Q 039897          252 YVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +++|++ . ..++||+.+++
T Consensus       237 ~~~l~~-~-~~~~~G~~~~~  254 (256)
T TIGR01500       237 LLSLLE-K-DKFKSGAHVDY  254 (256)
T ss_pred             HHHHHh-c-CCcCCcceeec
Confidence            999996 3 67999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=3.1e-32  Score=229.82  Aligned_cols=224  Identities=30%  Similarity=0.441  Sum_probs=187.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|++|||||+++||++++++|+++|++|++++|+......   ..+++.+    .+.++.++.+|++++++++++++.
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~---~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~   73 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEK---VAADIRA----KGGNAQAFACDITDRDSVDTAVAA   73 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHH---HHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987543333   3333332    356788999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|++|||+|... ..++.+.+.++|++.+++|+.+++++++.+.+.|++  .++|+++||..+..+.+.    
T Consensus        74 ~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y  152 (250)
T TIGR03206        74 AEQALGPVDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVY  152 (250)
T ss_pred             HHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchH
Confidence            9999999999999999853 467778889999999999999999999999999865  478999999877655433    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----C-HHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----S-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                +++++.++.+.||+++.++||+++|++.....    . .+....+....+.+++.+++|+|+++.+|+++
T Consensus       153 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  232 (250)
T TIGR03206       153 AACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSD  232 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCc
Confidence                      57888888888999999999999999764321    1 22334556677888899999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      + ..+++|++|.+|
T Consensus       233 ~-~~~~~g~~~~~~  245 (250)
T TIGR03206       233 D-ASFITGQVLSVS  245 (250)
T ss_pred             c-cCCCcCcEEEeC
Confidence            8 889999999886

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=231.22  Aligned_cols=226  Identities=31%  Similarity=0.451  Sum_probs=186.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      -.++++|++|||||+++||.+++++|+++|++|++++|+....+.   ...++..    .+.++.++.+|++++++++++
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~---~~~~i~~----~~~~~~~~~~Dl~d~~~i~~~   79 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEE---AAAHLEA----LGIDALWIAADVADEADIERL   79 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH---HHHHHHh----cCCeEEEEEccCCCHHHHHHH
Confidence            356889999999999999999999999999999999997543333   2333322    355678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhc-ccc--CCeEEEecCCCCccCCh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRH-MNE--GSAIINTTSVEPLWHSP-  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~--~g~iv~vsS~~~~~~~~-  192 (272)
                      ++++.+.++++|++|||||... ..++.+.+.+.|++.+++|+.+++++++++.++ |++  .++||++||..+..+.+ 
T Consensus        80 ~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~  158 (259)
T PRK08213         80 AEETLERFGHVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP  158 (259)
T ss_pred             HHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc
Confidence            9999999999999999999744 356777899999999999999999999999987 644  37899999976544321 


Q ss_pred             -------h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          193 -------E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       193 -------~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                             .          +++++.++.++||++|.++||+++|++..... +...+.+....+..++.+++|+++.+.+|
T Consensus       159 ~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l  237 (259)
T PRK08213        159 EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL-ERLGEDLLAHTPLGRLGDDEDLKGAALLL  237 (259)
T ss_pred             cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh-HHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence                   1          57888899889999999999999999865433 23333455567788889999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.+++|+++.+|
T Consensus       238 ~~~~-~~~~~G~~~~~~  253 (259)
T PRK08213        238 ASDA-SKHITGQILAVD  253 (259)
T ss_pred             hCcc-ccCccCCEEEEC
Confidence            9988 889999999886

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-32  Score=230.12  Aligned_cols=224  Identities=30%  Similarity=0.458  Sum_probs=184.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+..+   +..+.+..    .+.++.++.+|+++++++.++++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~---~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   79 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLD---EVAEQIRA----AGRRAHVVAADLAHPEATAGLAG   79 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHHHh----cCCcEEEEEccCCCHHHHHHHHH
Confidence            478999999999999999999999999999999999844333   33333322    34568889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh--
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~--  193 (272)
                      ++.+.++++|+||||||... ..++.+.+.++++.++++|+.+++++++++.+.|.+   .++||++||..+..+.+.  
T Consensus        80 ~~~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  158 (263)
T PRK07814         80 QAVEAFGRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFA  158 (263)
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCc
Confidence            99999999999999999854 356778899999999999999999999999999854   489999999877655433  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  +++++.++.+ +|+||+|+||++.|++..... ..+....+....+..+..+++|+|+.++|++++. 
T Consensus       159 ~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-  236 (263)
T PRK07814        159 AYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPA-  236 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc-
Confidence                        5778888876 699999999999999764321 2233334445567778889999999999999877 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|+++.+|
T Consensus       237 ~~~~~g~~~~~~  248 (263)
T PRK07814        237 GSYLTGKTLEVD  248 (263)
T ss_pred             ccCcCCCEEEEC
Confidence            789999999876

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=3.3e-32  Score=230.24  Aligned_cols=221  Identities=33%  Similarity=0.494  Sum_probs=183.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+++|||++++||.+++++|+++|++|++++|+...   +.+...++..    .+.++.++.+|+++++++.++++.+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~~~~~i~~~~~~~~~   73 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET---AKETAKEINQ----AGGKAVAYKLDVSDKDQVFSAIDQAAE   73 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999987433   3333333332    455688899999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~------  193 (272)
                      .++.+|+||||+|... ..++.+.+.++|++.+++|+.+++++++.+.+.|++   +++||++||..+..+.+.      
T Consensus        74 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  152 (254)
T TIGR02415        74 KFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSS  152 (254)
T ss_pred             HcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHH
Confidence            9999999999999854 467888999999999999999999999999998855   368999999876655432      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH----------HHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE----------EESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                              ++.++.++.+.||+|++|+||+++|++.......          .....+...++.+++.+|+|+++++.||
T Consensus       153 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  232 (254)
T TIGR02415       153 TKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL  232 (254)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhh
Confidence                    5788888888899999999999999985332111          1123344567888899999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. ..+++|+++.+|
T Consensus       233 ~~~~-~~~~~g~~~~~d  248 (254)
T TIGR02415       233 ASED-SDYITGQSILVD  248 (254)
T ss_pred             cccc-cCCccCcEEEec
Confidence            9988 889999999887

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-32  Score=232.33  Aligned_cols=228  Identities=26%  Similarity=0.363  Sum_probs=186.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|++||||++|+||.++++.|+++|++|++++|+.+..+   ...+++....  ...++.++.+|+++++++.++++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~l~~~~--~~~~~~~~~~Dl~~~~~~~~~~~   78 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLA---AAAEEIEALK--GAGAVRYEPADVTDEDQVARAVD   78 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH---HHHHHHHhcc--CCCceEEEEcCCCCHHHHHHHHH
Confidence            478999999999999999999999999999999998754333   3333333211  13567889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|++|||+|......++.+.+.++|..++++|+.+++++++++.+.|.+  .++|+++||..+..+.+.   
T Consensus        79 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  158 (276)
T PRK05875         79 AATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGA  158 (276)
T ss_pred             HHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcc
Confidence            999999999999999997544456778899999999999999999999999999854  479999999876554332   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                 ++.++.++...+|++++|.||+++|++....... .....+....|..++.+++|++++++||+++. .
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~  237 (276)
T PRK05875        159 YGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDA-A  237 (276)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCch-h
Confidence                       5788888888999999999999999987543322 22233445567788889999999999999887 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|+++++|
T Consensus       238 ~~~~g~~~~~~  248 (276)
T PRK05875        238 SWITGQVINVD  248 (276)
T ss_pred             cCcCCCEEEEC
Confidence            78999999886

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-32  Score=229.98  Aligned_cols=222  Identities=32%  Similarity=0.519  Sum_probs=179.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..|+||+++||||++|||.+++++|+++|++|++++|+...   +.+..+++       .  ..++++|+++++++++++
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~---~~~~~~~~-------~--~~~~~~D~~~~~~~~~~~   70 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA---GKAAADEV-------G--GLFVPTDVTDEDAVNALF   70 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHc-------C--CcEEEeeCCCHHHHHHHH
Confidence            34889999999999999999999999999999999987433   22222211       1  257899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh-h
Q 039897          118 DEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP-E  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~-~  193 (272)
                      +++.+.++++|++|||||.... ..++.+.+.+.|++.+++|+.+++++++.++|+|++  .++||++||..+..+.+ .
T Consensus        71 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~  150 (255)
T PRK06057         71 DTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS  150 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC
Confidence            9999999999999999997532 245777899999999999999999999999999864  57999999976544321 1


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                    ++.++.++.++||+|++|+||+++|++......  .+...+.....|.+++.+|+|+++++.+|++
T Consensus       151 ~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  230 (255)
T PRK06057        151 QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLAS  230 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence                          567778888899999999999999998654322  2222233345677889999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. ..+++|+++.+|
T Consensus       231 ~~-~~~~~g~~~~~~  244 (255)
T PRK06057        231 DD-ASFITASTFLVD  244 (255)
T ss_pred             cc-ccCccCcEEEEC
Confidence            87 889999999886

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.3e-32  Score=229.82  Aligned_cols=222  Identities=24%  Similarity=0.310  Sum_probs=177.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +++|++|||||++|||+++|+.|+++|++|++++|+.+..   .+..+++....  ....+.++.+|+++++++.++++.
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~---~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~   76 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL---NELLESLGKEF--KSKKLSLVELDITDQESLEEFLSK   76 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHHHhhc--CCCceeEEEecCCCHHHHHHHHHH
Confidence            6789999999999999999999999999999999875443   33333332210  123456679999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCC--CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC----
Q 039897          120 VVNAYGKIDILVNNAAVQYK--AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS----  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~----  191 (272)
                      +.+.++++|+|||||+....  ..++.+.+.++|...+++|+.+++.++++++|.|++  .++||++||..+....    
T Consensus        77 ~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  156 (256)
T PRK09186         77 SAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEI  156 (256)
T ss_pred             HHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchh
Confidence            99999999999999986421  246788899999999999999999999999999964  4799999997654211    


Q ss_pred             -----------hh---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhh
Q 039897          192 -----------PE---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       192 -----------~~---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                 +.         +++++.|+.++||+||.|+||.+.++..     ......+....+..+..+|+|+|++
T Consensus       157 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~  231 (256)
T PRK09186        157 YEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCCNGKGMLDPDDICGT  231 (256)
T ss_pred             ccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcCCccCCCCHHHhhhh
Confidence                       11         6788899989999999999999877642     2222333344566778899999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++++++. ..+++|+++.+|
T Consensus       232 ~~~l~~~~-~~~~~g~~~~~~  251 (256)
T PRK09186        232 LVFLLSDQ-SKYITGQNIIVD  251 (256)
T ss_pred             Hhheeccc-cccccCceEEec
Confidence            99999987 889999999886

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-32  Score=237.67  Aligned_cols=211  Identities=26%  Similarity=0.293  Sum_probs=172.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.++++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.+    .+.++.++.+|++|.++++++
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~---l~~~~~~~~~----~g~~~~~~~~Dv~d~~~v~~~   74 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEA---LQAVAEECRA----LGAEVLVVPTDVTDADQVKAL   74 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHH
Confidence            456889999999999999999999999999999999998443   4444444443    456788899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|++|||||+.. ..++.+.+.++|++++++|+.+++++++.++|+|++  .|+||+++|..+..+.+. 
T Consensus        75 ~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~  153 (330)
T PRK06139         75 ATQAASFGGRIDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYA  153 (330)
T ss_pred             HHHHHHhcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCc
Confidence            9999998899999999999854 467889999999999999999999999999999965  489999999887766543 


Q ss_pred             -------------HHHHHHHHhhC-CeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVER-GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~-gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   +++++.|+.+. ||+|++|+||+++|++....... .   .....+.....+|+++|+.+++++...
T Consensus       154 ~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-~---~~~~~~~~~~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        154 AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-T---GRRLTPPPPVYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-c---cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence                         68889999875 89999999999999986432110 0   001112334568999999999998765

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.2e-32  Score=253.09  Aligned_cols=223  Identities=31%  Similarity=0.480  Sum_probs=184.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+++|++||||+++|||++++++|+++|++|++++|+...   +.+...+       .+.++.++.+|++++++++++++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   71 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER---ARERADS-------LGPDHHALAMDVSDEAQIREGFE   71 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------hCCceeEEEeccCCHHHHHHHHH
Confidence            4679999999999999999999999999999999997433   3332222       24467789999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--C-CeEEEecCCCCccCChh-
Q 039897          119 EVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--G-SAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~-g~iv~vsS~~~~~~~~~-  193 (272)
                      ++.+.++++|+||||||+... ..++.+.+.++|++++++|+.++++++++++|+|++  . ++||++||..+..+.+. 
T Consensus        72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~  151 (520)
T PRK06484         72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKR  151 (520)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCC
Confidence            999999999999999998432 356778899999999999999999999999999954  2 49999999887766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH--HHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                   +++++.|+.++||+||+|+||+++|++.......  ..........+.++..+|+|+++.+.||+++
T Consensus       152 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        152 TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence                         6889999999999999999999999986432211  1122334456777888999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..+++|+++.+|
T Consensus       232 ~-~~~~~G~~~~~~  244 (520)
T PRK06484        232 Q-ASYITGSTLVVD  244 (520)
T ss_pred             c-ccCccCceEEec
Confidence            7 889999999875

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=5.5e-32  Score=215.79  Aligned_cols=226  Identities=27%  Similarity=0.355  Sum_probs=192.1

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..|+||++||+|-.  .+|+..||+.|.++|+++..++.+.    ++++...++.+    .-.....++||+++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e----~l~krv~~la~----~~~s~~v~~cDV~~d~~i~~   73 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE----RLEKRVEELAE----ELGSDLVLPCDVTNDESIDA   73 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH----HHHHHHHHHHh----hccCCeEEecCCCCHHHHHH
Confidence            57999999999966  5999999999999999999999974    55555555554    23336779999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+.+|++|.|||+.++...   .+.+.+.+.+.|...+++..+++..+.+++.|+|.++|+|+-++=..+.+..|
T Consensus        74 ~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vP  153 (259)
T COG0623          74 LFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVP  153 (259)
T ss_pred             HHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecC
Confidence            999999999999999999999653   25677799999999999999999999999999999999998777655555544


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +|.||.+++++|||||+|+.|++.|=-...... ...........|++|..+.|||++..+||+|
T Consensus       154 nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlS  233 (259)
T COG0623         154 NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLS  233 (259)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhc
Confidence            4              799999999999999999999998854322211 2334556778999999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +- +..+|||++++|
T Consensus       234 dL-ssgiTGei~yVD  247 (259)
T COG0623         234 DL-SSGITGEIIYVD  247 (259)
T ss_pred             ch-hcccccceEEEc
Confidence            98 999999999998

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.3e-31  Score=225.71  Aligned_cols=224  Identities=37%  Similarity=0.539  Sum_probs=183.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+++|+++||||++|||.+++++|+++|++|+++.++.  .+..++..+++.+    .+.++.++.+|+++++++.++++
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~--~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~   76 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSS--KEAAENLVNELGK----EGHDVYAVQADVSKVEDANRLVE   76 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCc--HHHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHH
Confidence            47799999999999999999999999999998765542  2333333344433    35578899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||||... ...+.+.+.+++++.+++|+.+++.++++++|+|.+  .++||++||..+..+.+.   
T Consensus        77 ~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  155 (247)
T PRK12935         77 EAVNHFGKVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTN  155 (247)
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcc
Confidence            99999999999999999854 356777889999999999999999999999999854  579999999876554332   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 +++++.++.+.||+++.++||+++|++... .+......+....+.+++.+++|++++++++++.  ..
T Consensus       156 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~--~~  232 (247)
T PRK12935        156 YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD--GA  232 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc--cc
Confidence                       567888888889999999999999988643 3333334444566777889999999999999864  45


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      +++|+++++|
T Consensus       233 ~~~g~~~~i~  242 (247)
T PRK12935        233 YITGQQLNIN  242 (247)
T ss_pred             CccCCEEEeC
Confidence            8999999986

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.4e-32  Score=225.27  Aligned_cols=205  Identities=27%  Similarity=0.401  Sum_probs=172.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..+.+|++||||||++|||+++|.+|+++|+++++.|.+.+.   ..+..++++..     +++..+.||+++.+++.+
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~---~~etv~~~~~~-----g~~~~y~cdis~~eei~~  103 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQG---NEETVKEIRKI-----GEAKAYTCDISDREEIYR  103 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccc---hHHHHHHHHhc-----CceeEEEecCCCHHHHHH
Confidence            4567999999999999999999999999999999999998554   44445555432     489999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++++++|.+|+||||||+.. ..++.+.+.+++++++++|+.|+++.+++|+|.|.+  +|+||.++|.+|..+.++
T Consensus       104 ~a~~Vk~e~G~V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g  182 (300)
T KOG1201|consen  104 LAKKVKKEVGDVDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG  182 (300)
T ss_pred             HHHHHHHhcCCceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc
Confidence            99999999999999999999966 478888999999999999999999999999999955  699999999999988777


Q ss_pred             --------------HHHHHHHHhh---CCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 --------------ARGLALQLVE---RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 --------------~~~la~e~~~---~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                                    .++|..|+..   +||+...|+|++++|.|....         .....+.....|+.+|+.++.-+
T Consensus       183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~---------~~~~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA---------TPFPTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC---------CCCccccCCCCHHHHHHHHHHHH
Confidence                          5788888775   579999999999999998541         01112333457888888877655


Q ss_pred             cc
Q 039897          257 CN  258 (272)
Q Consensus       257 s~  258 (272)
                      ..
T Consensus       254 ~~  255 (300)
T KOG1201|consen  254 LT  255 (300)
T ss_pred             Hc
Confidence            43

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-32  Score=225.71  Aligned_cols=218  Identities=23%  Similarity=0.305  Sum_probs=176.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC--hHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF--DENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~  115 (272)
                      ..|++|+++||||++|||++++++|+++|++|++++|+...   +....+++.+.   ....+.++.+|+++  .+++.+
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~---~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~   75 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKK---LEKVYDAIVEA---GHPEPFAIRFDLMSAEEKEFEQ   75 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHH---HHHHHHHHHHc---CCCCcceEEeeecccchHHHHH
Confidence            35889999999999999999999999999999999998543   33333333321   23456788999976  568899


Q ss_pred             HHHHHHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+.+ +.+|+||||||......++.+.+.++|++.+++|+.+++++++++++.|.+  .+++++++|..+..+.+
T Consensus        76 ~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~  155 (239)
T PRK08703         76 FAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKA  155 (239)
T ss_pred             HHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCC
Confidence            999999888 789999999998654467888999999999999999999999999999865  47999999987665543


Q ss_pred             h--------------HHHHHHHHhhC-CeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVER-GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~-gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++++.|+.++ +|+||+|+||+|+|++.....+.+.         ..+...++|++..+.|+++
T Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~  226 (239)
T PRK08703        156 YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA---------KSERKSYGDVLPAFVWWAS  226 (239)
T ss_pred             CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC---------ccccCCHHHHHHHHHHHhC
Confidence            2              67888998876 6999999999999998643322111         1123589999999999999


Q ss_pred             cCCCCcccceeecc
Q 039897          258 NHCSSYITGQVLHP  271 (272)
Q Consensus       258 ~~~~~~~tG~~i~i  271 (272)
                      +. +.++||++|.+
T Consensus       227 ~~-~~~~~g~~~~~  239 (239)
T PRK08703        227 AE-SKGRSGEIVYL  239 (239)
T ss_pred             cc-ccCcCCeEeeC
Confidence            88 99999999864

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2e-31  Score=224.13  Aligned_cols=222  Identities=32%  Similarity=0.422  Sum_probs=184.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .|++||||++++||++++++|+++|++|++++|+..  +...+.......    ...++.++.+|+++.++++++++.+.
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~--~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCAKDWFEEYGF----TEDQVRLKELDVTDTEECAEALAEIE   75 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhhc----cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999998743  222222222211    34568899999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~------  193 (272)
                      +.++++|+||||+|... ..++.+.+.++|++.+++|+.+++++++.+++.|++  .++||++||..+..+.+.      
T Consensus        76 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~  154 (245)
T PRK12824         76 EEEGPVDILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSA  154 (245)
T ss_pred             HHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHH
Confidence            99999999999999854 366778899999999999999999999999999864  579999999877655432      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccc
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT  265 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~t  265 (272)
                              ++.++.++.+.||+++.+.||++.|++.... .......+....+.+...+++|+++++.+|+++. ..+++
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~~~~~  232 (245)
T PRK12824        155 AKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM-GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEA-AGFIT  232 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc-ccCcc
Confidence                    5788888888999999999999999986543 3444445556677888889999999999999887 78999


Q ss_pred             ceeeccC
Q 039897          266 GQVLHPN  272 (272)
Q Consensus       266 G~~i~id  272 (272)
                      |+++.+|
T Consensus       233 G~~~~~~  239 (245)
T PRK12824        233 GETISIN  239 (245)
T ss_pred             CcEEEEC
Confidence            9999886

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=225.43  Aligned_cols=224  Identities=36%  Similarity=0.522  Sum_probs=182.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|++|||||+++||++++++|+++|++|++++|+...   .....+++.     .+.++.++.+|++|+++++++++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   73 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEA---AERVAAAIA-----AGGRAFARQGDVGSAEAVEALVD   73 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHH---HHHHHHHHh-----cCCeEEEEEcCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999987433   333233332     34568899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      .+.+.++++|+||||+|... ...+.+.+.+++++++++|+.+++++++.+++.|++  .++|+++||..+..+.+.   
T Consensus        74 ~i~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~  152 (252)
T PRK06138         74 FVAARWGRLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAA  152 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccH
Confidence            99999999999999999854 356778899999999999999999999999999865  478999999866544332   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----H-HHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----E-EESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                 +++++.++..+||+|++++||.+.|++......    + ..........+..++.+++|++..++++++
T Consensus       153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~  232 (252)
T PRK06138        153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLAS  232 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence                       578888888889999999999999997643221    1 112222334456667899999999999998


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. ..+++|+.+.+|
T Consensus       233 ~~-~~~~~g~~~~~~  246 (252)
T PRK06138        233 DE-SSFATGTTLVVD  246 (252)
T ss_pred             ch-hcCccCCEEEEC
Confidence            87 789999999876

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=223.46  Aligned_cols=199  Identities=26%  Similarity=0.341  Sum_probs=158.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +++||||++|||+++++.|+++|++|++++|+.++   +.+..+++         ++.++++|++++++++++++++.+ 
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~---~~~~~~~~---------~~~~~~~D~~~~~~v~~~~~~~~~-   68 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDD---LEVAAKEL---------DVDAIVCDNTDPASLEEARGLFPH-   68 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhc---------cCcEEecCCCCHHHHHHHHHHHhh-
Confidence            58999999999999999999999999999987432   22222211         356789999999999999887653 


Q ss_pred             cCCccEEEEcccccCC-----CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          124 YGKIDILVNNAAVQYK-----AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                        ++|++|||+|....     ..++.+ +.++|++++++|+.++++++++++|.|+++|+||+++|.+.......     
T Consensus        69 --~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~Y~asKa  145 (223)
T PRK05884         69 --HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENPPAGSAEAAIKA  145 (223)
T ss_pred             --cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCCccccHHHHH
Confidence              69999999985321     112333 57899999999999999999999999988899999999763222111     


Q ss_pred             -----HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccccee
Q 039897          194 -----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV  268 (272)
Q Consensus       194 -----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~  268 (272)
                           +++++.|++++||+||+|+||+++|++...         . ...|.   ..|+|+++.+.||+++. +.++||++
T Consensus       146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~---------~-~~~p~---~~~~~ia~~~~~l~s~~-~~~v~G~~  211 (223)
T PRK05884        146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG---------L-SRTPP---PVAAEIARLALFLTTPA-ARHITGQT  211 (223)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh---------c-cCCCC---CCHHHHHHHHHHHcCch-hhccCCcE
Confidence                 789999999999999999999999986421         1 11232   37999999999999988 89999999


Q ss_pred             eccC
Q 039897          269 LHPN  272 (272)
Q Consensus       269 i~id  272 (272)
                      +.+|
T Consensus       212 i~vd  215 (223)
T PRK05884        212 LHVS  215 (223)
T ss_pred             EEeC
Confidence            9887

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-31  Score=226.44  Aligned_cols=221  Identities=29%  Similarity=0.476  Sum_probs=178.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecc-cchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVK-SQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      ++||||++|||.++++.|+++|++|++++|+ .+..+.+   .+++....  ....+..+.+|++++++++++++++.+.
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAF---AAEINAAH--GEGVAFAAVQDVTDEAQWQALLAQAADA   76 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHH---HHHHHhcC--CCceEEEEEeecCCHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999987 3322222   22222210  1123456889999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--------  193 (272)
                      ++++|+||||||... ..++.+.+.+++++++++|+.+++.+++.+++.|++  .++||++||..+..+.+.        
T Consensus        77 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK  155 (251)
T PRK07069         77 MGGLSVLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASK  155 (251)
T ss_pred             cCCccEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHH
Confidence            999999999999854 367788899999999999999999999999999975  379999999887655433        


Q ss_pred             ------HHHHHHHHhhCC--eEEEEEecccccCCCCCCCC----CHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------ARGLALQLVERG--IRVNGVAPGPIWTPLIPSSF----SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------~~~la~e~~~~g--i~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                            +++++.|+.+++  |+|++|+||+++|++.....    .++....+....+.+++.+|+|+++.+++|+++. .
T Consensus       156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~  234 (251)
T PRK07069        156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDE-S  234 (251)
T ss_pred             HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCcc-c
Confidence                  678888887764  99999999999999864321    2233344555677888899999999999999887 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|+.|.+|
T Consensus       235 ~~~~g~~i~~~  245 (251)
T PRK07069        235 RFVTGAELVID  245 (251)
T ss_pred             cCccCCEEEEC
Confidence            89999999886

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-31  Score=224.16  Aligned_cols=226  Identities=33%  Similarity=0.461  Sum_probs=181.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++++++++||||+|+||++++++|+++|++|+++ .|+.   +.+.+..+.+..    .+.++.++.+|++|++++.++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~i~~~   74 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK---QAADETIREIES----NGGKAFLIEADLNSIDGVKKL   74 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHHHh----cCCcEEEEEcCcCCHHHHHHH
Confidence            45789999999999999999999999999999875 4542   333333333332    345678899999999999999


Q ss_pred             HHHHHHhc------CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC
Q 039897          117 VDEVVNAY------GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH  190 (272)
Q Consensus       117 ~~~~~~~~------g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~  190 (272)
                      ++++.+.+      +++|++|||||... ...+.+.+.+.|+..+++|+.+++++++.+.+.|++.+++|++||..+..+
T Consensus        75 ~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~  153 (254)
T PRK12746         75 VEQLKNELQIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG  153 (254)
T ss_pred             HHHHHHHhccccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC
Confidence            99999877      47999999999854 356788899999999999999999999999999987789999999876544


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .+.              +++++.++.++|++|++++||++.|++...... ++.........++++..+++|+++.+.++
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  233 (254)
T PRK12746        154 FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFL  233 (254)
T ss_pred             CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence            322              567888888899999999999999998654332 22222233445667788999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.+++|++++++
T Consensus       234 ~~~~-~~~~~g~~~~i~  249 (254)
T PRK12746        234 ASSD-SRWVTGQIIDVS  249 (254)
T ss_pred             cCcc-cCCcCCCEEEeC
Confidence            9876 778999999875

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.5e-31  Score=228.21  Aligned_cols=220  Identities=26%  Similarity=0.398  Sum_probs=167.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH----HHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC----KRVVD  118 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~----~~~~~  118 (272)
                      ++++||||++|||++++++|+++|++|++++++..  +.+....+++..   ..+.+..++.+|++|.+++    +++++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~--~~~~~~~~~l~~---~~~~~~~~~~~Dv~d~~~~~~~~~~~~~   76 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSA--AAASTLAAELNA---RRPNSAVTCQADLSNSATLFSRCEAIID   76 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcH--HHHHHHHHHHHh---ccCCceEEEEccCCCchhhHHHHHHHHH
Confidence            68999999999999999999999999999876532  233333333322   1234567789999999865    56666


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCH-----------HHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeE
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDE-----------ERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAI  179 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~i  179 (272)
                      .+.+.++++|+||||||.... .++.+.+.           ++|.+++++|+.+++++++++.++|+.        .++|
T Consensus        77 ~~~~~~g~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  155 (267)
T TIGR02685        77 ACFRAFGRCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSI  155 (267)
T ss_pred             HHHHccCCceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEE
Confidence            666778999999999998543 34433333           358999999999999999999999853        2579


Q ss_pred             EEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCC-CCCC
Q 039897          180 INTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMK-RAGQ  244 (272)
Q Consensus       180 v~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~  244 (272)
                      ++++|..+..+.+.              +++++.|+.++||+||+|+||++.|+..   ...+..+.+....++. +..+
T Consensus       156 v~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  232 (267)
T TIGR02685       156 VNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA---MPFEVQEDYRRKVPLGQREAS  232 (267)
T ss_pred             EEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc---cchhHHHHHHHhCCCCcCCCC
Confidence            99999876554332              7889999999999999999999976632   2223333344445654 6789


Q ss_pred             ccchhhhhhhhhccCCCCcccceeeccC
Q 039897          245 PIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       245 ~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+++.++||+++. +.+++|+++.+|
T Consensus       233 ~~~va~~~~~l~~~~-~~~~~G~~~~v~  259 (267)
T TIGR02685       233 AEQIADVVIFLVSPK-AKYITGTCIKVD  259 (267)
T ss_pred             HHHHHHHHHHHhCcc-cCCcccceEEEC
Confidence            999999999999987 889999999886

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-31  Score=224.58  Aligned_cols=226  Identities=30%  Similarity=0.454  Sum_probs=184.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+++|+++|||++++||..++++|+++|++ |++++|+..+.   ....+++.+    .+.++.++.+|+++++++.++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~---~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~   74 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG---EAQAAELEA----LGAKAVFVQADLSDVEDCRRV   74 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH---HHHHHHHHh----cCCeEEEEEccCCCHHHHHHH
Confidence            4588999999999999999999999999999 99999874333   333333332    455678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++.+.+.++++|++|||+|... ..++.+.+.+.|+.++++|+.+++++++++++.|++   .+++|++||..+..+.+.
T Consensus        75 ~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~  153 (260)
T PRK06198         75 VAAADEAFGRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF  153 (260)
T ss_pred             HHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC
Confidence            9999999999999999999854 356778899999999999999999999999999855   378999999887655432


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC---C---CHHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS---F---SEEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                                    +++++.|+...+|+|++|+||++.|++....   +   ............+.++..+++|+++.+.
T Consensus       154 ~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  233 (260)
T PRK06198        154 LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVA  233 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHH
Confidence                          5788888988999999999999999874210   0   1112223334566778889999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      +|+++. ..+++|++|.+|
T Consensus       234 ~l~~~~-~~~~~G~~~~~~  251 (260)
T PRK06198        234 FLLSDE-SGLMTGSVIDFD  251 (260)
T ss_pred             HHcChh-hCCccCceEeEC
Confidence            999887 889999999887

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.8e-31  Score=222.91  Aligned_cols=223  Identities=33%  Similarity=0.446  Sum_probs=179.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||+++||.++++.|+++|++|++++|+...  ...+..+.+..    ...++.++.+|+++++++.++++.+.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~--~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDE--ELAATQQELRA----LGVEVIFFPADVADLSAHEAMLDAAQ   75 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999999999986432  23333333332    34578899999999999999999999


Q ss_pred             HhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeEEEecCCCCccCCh
Q 039897          122 NAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~iv~vsS~~~~~~~~  192 (272)
                      +.++++|++|||+|.... ..++.+.+.++|++.+++|+.+++++++++.+.|++        .++||++||..+..+.+
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  155 (256)
T PRK12745         76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP  155 (256)
T ss_pred             HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC
Confidence            999999999999997532 246778889999999999999999999999999854        24699999987655433


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhh-ccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF-GSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++++.++.++||+|++|+||.+.|++..... +.....+ ....|..++.+++|+++++.++++
T Consensus       156 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~  234 (256)
T PRK12745        156 NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT-AKYDALIAKGLVPMPRWGEPEDVARAVAALAS  234 (256)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc-hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhC
Confidence            2              57888888889999999999999998764322 2211111 224677788899999999999998


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. ..+++|+++++|
T Consensus       235 ~~-~~~~~G~~~~i~  248 (256)
T PRK12745        235 GD-LPYSTGQAIHVD  248 (256)
T ss_pred             Cc-ccccCCCEEEEC
Confidence            77 778999999886

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=8.4e-31  Score=219.93  Aligned_cols=221  Identities=32%  Similarity=0.435  Sum_probs=182.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||+++||++++++|+++|++|+++.|..  .....+...++..    ...++.++.+|++++++++++++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPN--EERAEAWLQEQGA----LGFDFRVVEGDVSSFESCKAAVAKVEA   74 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999998832  2333333333322    345788999999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-------  193 (272)
                      .++++|+||||+|... ...+.+.+.++|++.+++|+.+++.+++.+++.|++  .++||++||..+..+.+.       
T Consensus        75 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  153 (242)
T TIGR01829        75 ELGPIDVLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAA  153 (242)
T ss_pred             HcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHH
Confidence            9999999999999854 356778899999999999999999999999999965  378999999876554332       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccc
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG  266 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG  266 (272)
                             +++++.++...||+++.+.||++.|++... ..+.....+....+..+..+|+|+++.+.||++++ ..+++|
T Consensus       154 k~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~-~~~~~G  231 (242)
T TIGR01829       154 KAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA-MREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEE-AGYITG  231 (242)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch-hcCccC
Confidence                   567888888899999999999999998643 23444444555678888899999999999999887 789999


Q ss_pred             eeeccC
Q 039897          267 QVLHPN  272 (272)
Q Consensus       267 ~~i~id  272 (272)
                      ++|.+|
T Consensus       232 ~~~~~~  237 (242)
T TIGR01829       232 ATLSIN  237 (242)
T ss_pred             CEEEec
Confidence            999987

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-31  Score=223.68  Aligned_cols=224  Identities=32%  Similarity=0.445  Sum_probs=183.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +++|++|||||+++||++++++|+++|++|++++|+....+.+   ..++..    .+.++..+.+|+++++++++++++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~---~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~   74 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAA---AEALQK----AGGKAIGVAMDVTDEEAINAGIDY   74 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH---HHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            6789999999999999999999999999999999985543333   333332    456788999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++.+|+||||+|... ...+.+.+.++++..+++|+.+++.+++.+++.|++  .++||++||..+..+.+.    
T Consensus        75 ~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  153 (258)
T PRK12429         75 AVETFGGVDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAY  153 (258)
T ss_pred             HHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchh
Confidence            9999999999999999854 356778899999999999999999999999999965  478999999876655433    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----------H-HHHHhhccCCCCCCCCCccchhhhh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----------E-EESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                                ++.++.++.+.||+|++++||++.|++......          . .....+....+.+++.+++|+|+.+
T Consensus       154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  233 (258)
T PRK12429        154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYA  233 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHH
Confidence                      578888888899999999999999987642211          1 1112233445667889999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++|+++. ...++|+++++|
T Consensus       234 ~~l~~~~-~~~~~g~~~~~~  252 (258)
T PRK12429        234 LFLASFA-AKGVTGQAWVVD  252 (258)
T ss_pred             HHHcCcc-ccCccCCeEEeC
Confidence            9999876 678899999886

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-31  Score=225.78  Aligned_cols=214  Identities=22%  Similarity=0.298  Sum_probs=170.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..|++|++|||||++|||++++++|+++|++|++++|+..   .+.+..+++..    .+.++.++.+|+++++++.+++
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~---~l~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~   74 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKP---GLRQAVNHLRA----EGFDVHGVMCDVRHREEVTHLA   74 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHh----cCCeEEEEeCCCCCHHHHHHHH
Confidence            4588999999999999999999999999999999998843   33444444432    3456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|.+   +|+||++||.++..+.+. 
T Consensus        75 ~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~  153 (275)
T PRK05876         75 DEAFRLLGHVDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL  153 (275)
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCC
Confidence            999999999999999999854 467889999999999999999999999999999854   478999999887765543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHH-------H-HhhccCCCCCCCCCccchhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE-------S-AQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~dva~~~  252 (272)
                                   +++++.|+.++||+|++|+||+++|++.........       . ...........+.+|+|+|+.+
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLT  233 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHH
Confidence                         678889998899999999999999998643210000       0 0001111123457899999998


Q ss_pred             hhhhccC
Q 039897          253 VFLACNH  259 (272)
Q Consensus       253 ~~L~s~~  259 (272)
                      +..+...
T Consensus       234 ~~ai~~~  240 (275)
T PRK05876        234 ADAILAN  240 (275)
T ss_pred             HHHHHcC
Confidence            8776543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-30  Score=219.78  Aligned_cols=222  Identities=34%  Similarity=0.543  Sum_probs=179.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTY-VKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      |++|||||+|+||++++++|+++|++|+++. |+   .+...+...++..    .+.++.++.+|++|+++++++++.+.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~i~~~~~~~~   74 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQN---LHAAQEVVNLITQ----AGGKAFVLQADISDENQVVAMFTAID   74 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC---hHHHHHHHHHHHh----CCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999998754 43   2333344444432    35567889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCccCChh---
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~~~~~---  193 (272)
                      +.++++|+||||+|......++.+.+.++|+..+++|+.+++++++.+++.|.+     .++||++||..+..+.+.   
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~  154 (247)
T PRK09730         75 QHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYV  154 (247)
T ss_pred             HhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCccc
Confidence            999999999999998645567788899999999999999999999999998854     367999999866544331   


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.++.++||++++++||++.|++.................|..+..+++|+++.+++++++. .
T Consensus       155 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~-~  233 (247)
T PRK09730        155 DYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDK-A  233 (247)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChh-h
Confidence                        577788888899999999999999997644333333334445567777779999999999999887 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|+.+.+|
T Consensus       234 ~~~~g~~~~~~  244 (247)
T PRK09730        234 SYVTGSFIDLA  244 (247)
T ss_pred             cCccCcEEecC
Confidence            78999999886

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.4e-30  Score=219.28  Aligned_cols=226  Identities=31%  Similarity=0.479  Sum_probs=182.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch-hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE-EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++.+++++||||+++||+++++.|+++|++|+++++.... .+...+..+++..    .+.++.++.+|++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~   77 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA----AGGKALGLAFDVRDFAATRAA   77 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            34778999999999999999999999999999998774332 3333333333332    456788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH-hcccc--CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSL-RHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      ++.+.+.++++|+||||+|... ..++.+.+.++|++.+++|+.+++.+++++. +.|++  .++||++||..+..+.+.
T Consensus        78 ~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  156 (249)
T PRK12827         78 LDAGVEEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG  156 (249)
T ss_pred             HHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC
Confidence            9999998899999999999855 3677888999999999999999999999999 66654  368999999877654333


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.++.+.||++++++||+++|++.......   .......+.....+++|+++.+++|+++.
T Consensus       157 ~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        157 QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPVQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCCcCCcCHHHHHHHHHHHcCcc
Confidence                          5778888888899999999999999986543322   23334456666779999999999999876


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       ...++|+++++|
T Consensus       234 -~~~~~g~~~~~~  245 (249)
T PRK12827        234 -ASYVTGQVIPVD  245 (249)
T ss_pred             -cCCccCcEEEeC
Confidence             789999999886

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2e-30  Score=218.13  Aligned_cols=224  Identities=40%  Similarity=0.626  Sum_probs=184.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +|++|++|||||+++||.++++.|+++|++|+++ +|+....   ....+.+..    .+.++.++.+|+++++++++++
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~---~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA---QELLEEIKE----EGGDAIAVKADVSSEEDVENLV   74 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHHHh----cCCeEEEEECCCCCHHHHHHHH
Confidence            5788999999999999999999999999999998 7764433   333333332    3556888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +.+.+.++++|+||||+|.. ...++.+.+.+++++.+++|+.+++.+++.+.+.|++  .+++|++||..+..+.+.  
T Consensus        75 ~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~  153 (247)
T PRK05565         75 EQIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEV  153 (247)
T ss_pred             HHHHHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCcc
Confidence            99999999999999999986 4467788899999999999999999999999999865  378999999876554332  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.++...||++++++||+++|++..... +.....+....+..+..+++|+++.+++|+++. .
T Consensus       154 ~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~  231 (247)
T PRK05565        154 LYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS-EEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDD-A  231 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc-c
Confidence                        57788888889999999999999998875433 222233333456677789999999999999987 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      ..++|+++.+|
T Consensus       232 ~~~~g~~~~~~  242 (247)
T PRK05565        232 SYITGQIITVD  242 (247)
T ss_pred             CCccCcEEEec
Confidence            89999999987

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.98  E-value=8.3e-31  Score=248.90  Aligned_cols=229  Identities=28%  Similarity=0.397  Sum_probs=185.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ...|++|++|||||++|||++++++|+++|++|++++|+....   ....+.+....  ...++..+.+|+++++++.++
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~---~~~~~~l~~~~--~~~~~~~v~~Dvtd~~~v~~a  483 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAA---EAVAAEINGQF--GAGRAVALKMDVTDEQAVKAA  483 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHH---HHHHHHHHhhc--CCCcEEEEECCCCCHHHHHHH
Confidence            3558899999999999999999999999999999999975433   33333332110  223577899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+.+|++|+||||||... ..++.+.+.++|+..+++|+.+++++++.+++.|++   +++||++||..+..+.+.
T Consensus       484 ~~~i~~~~g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~  562 (676)
T TIGR02632       484 FADVALAYGGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN  562 (676)
T ss_pred             HHHHHHhcCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC
Confidence            9999999999999999999854 367788899999999999999999999999999865   468999999877665443


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccC--CCCCCC----------CCH-HHHHhhccCCCCCCCCCcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWT--PLIPSS----------FSE-EESAQFGSEVPMKRAGQPI  246 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t--~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~  246 (272)
                                    +++++.++.++||+||+|+||.|.+  .++...          ... +..+.+..+.++++..+|+
T Consensus       563 ~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe  642 (676)
T TIGR02632       563 ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA  642 (676)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHH
Confidence                          6788999999999999999999864  232111          111 2223356678888999999


Q ss_pred             chhhhhhhhhccCCCCcccceeeccC
Q 039897          247 EVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       247 dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+++.||+++. ..++||++|++|
T Consensus       643 DVA~av~~L~s~~-~~~~TG~~i~vD  667 (676)
T TIGR02632       643 DIAEAVFFLASSK-SEKTTGCIITVD  667 (676)
T ss_pred             HHHHHHHHHhCCc-ccCCcCcEEEEC
Confidence            9999999999877 789999999987

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=9.4e-31  Score=239.10  Aligned_cols=222  Identities=28%  Similarity=0.402  Sum_probs=180.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..++++++||||+++|||.+++++|+++|++|+++++... .+.+.+...+         .+..++.+|+++++++++++
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~-~~~l~~~~~~---------~~~~~~~~Dv~~~~~~~~~~  275 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA-GEALAAVANR---------VGGTALALDITAPDAPARIA  275 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHH---------cCCeEEEEeCCCHHHHHHHH
Confidence            3578999999999999999999999999999999988422 2233322221         12357899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHh--ccccCCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLR--HMNEGSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~--~~~~~g~iv~vsS~~~~~~~~~--  193 (272)
                      +.+.+.++++|+||||||+.. ...+.+.+.++|+.++++|+.+++++++++.+  .++++++||++||.++..+.++  
T Consensus       276 ~~~~~~~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~  354 (450)
T PRK08261        276 EHLAERHGGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQT  354 (450)
T ss_pred             HHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCCh
Confidence            999999999999999999864 46788899999999999999999999999999  4556789999999877655433  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.++.++||++|+|+||+++|++.... +....+......++.+...|+|++++++||+++. +
T Consensus       355 ~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~-~  432 (450)
T PRK08261        355 NYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI-PFATREAGRRMNSLQQGGLPVDVAETIAWLASPA-S  432 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc-chhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChh-h
Confidence                        5788999999999999999999999886432 2111111122345667789999999999999987 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||++|.+|
T Consensus       433 ~~itG~~i~v~  443 (450)
T PRK08261        433 GGVTGNVVRVC  443 (450)
T ss_pred             cCCCCCEEEEC
Confidence            89999999886

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=3.3e-30  Score=217.60  Aligned_cols=222  Identities=27%  Similarity=0.451  Sum_probs=180.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +++++++||||+++|||+++++.|+++|++|++++|+...   +....+++..    .+.++.++.+|+++.++++++++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEK---LEEAVAECGA----LGTEVRGYAANVTDEEDVEATFA   74 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999987433   3334444433    35678889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCC-------CCc-ccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKA-------GSV-EEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEP  187 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~-------~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~  187 (272)
                      .+.+.++++|+||||+|.....       ..+ .+.+.++|..++++|+.+++.+++.+.+.|.+   .+.|+++||...
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~  154 (253)
T PRK08217         75 QIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR  154 (253)
T ss_pred             HHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence            9998889999999999975321       112 66788999999999999999999999998843   468999998754


Q ss_pred             ccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          188 LWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       188 ~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                      . +.+.              +++++.++.++||++++++||++.|++... ..++..+.+....|.+++.+++|+++.+.
T Consensus       155 ~-~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  232 (253)
T PRK08217        155 A-GNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPVGRLGEPEEIAHTVR  232 (253)
T ss_pred             c-CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence            3 2221              678888888899999999999999998744 33444455556678888899999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      +|++.   .+++|++|++|
T Consensus       233 ~l~~~---~~~~g~~~~~~  248 (253)
T PRK08217        233 FIIEN---DYVTGRVLEID  248 (253)
T ss_pred             HHHcC---CCcCCcEEEeC
Confidence            99963   48899999886

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2e-30  Score=227.94  Aligned_cols=210  Identities=26%  Similarity=0.331  Sum_probs=172.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+   .+.+..+++.+    .+.++.++.+|++|++++++++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~---~l~~~~~~l~~----~g~~~~~v~~Dv~d~~~v~~~~   76 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEE---GLEALAAEIRA----AGGEALAVVADVADAEAVQAAA   76 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHH----cCCcEEEEEecCCCHHHHHHHH
Confidence            4588999999999999999999999999999999999743   34444444443    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +.+.++++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.+++.|++  .++||++||..+..+.+.  
T Consensus        77 ~~~~~~~g~iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~  155 (334)
T PRK07109         77 DRAEEELGPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQS  155 (334)
T ss_pred             HHHHHHCCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcch
Confidence            999999999999999999854 467888999999999999999999999999999976  489999999987766543  


Q ss_pred             ------------HHHHHHHHhh--CCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ------------ARGLALQLVE--RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ------------~~~la~e~~~--~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                  +++++.|+..  .+|+|+.|+||.++|++.... . ..  ......+..+..+|+|+|+++++++++.
T Consensus       156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~-~-~~--~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA-R-SR--LPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh-h-hh--ccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence                        5778888875  479999999999999975321 0 00  0111234456779999999999999865

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-30  Score=218.31  Aligned_cols=220  Identities=24%  Similarity=0.303  Sum_probs=179.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||+++||.+++++|+++|++|++++|+....+.+   .+.+      ...++.++++|+++.+++.++++++.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~---~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAF---ADAL------GDARFVPVACDLTDAASLAAALANAA   72 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh------cCCceEEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999875443332   2222      23467889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC--hh----
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS--PE----  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~--~~----  193 (272)
                      ++++++|++|||+|.... .++.+.+.++|...+.+|+.+++.+++++.+.|++  .++|+++||..+....  +.    
T Consensus        73 ~~~~~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~y~~s  151 (257)
T PRK07074         73 AERGPVDVLVANAGAARA-ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYSAA  151 (257)
T ss_pred             HHcCCCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCCCcccHHH
Confidence            999999999999998543 56778899999999999999999999999998854  4789999997543221  11    


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--CHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcc
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI  264 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~  264 (272)
                             +++++.++.++||+||+++||++.|++.....  ..+.........+..++.+++|+++++++|+++. ..++
T Consensus       152 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~-~~~~  230 (257)
T PRK07074        152 KAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPA-ARAI  230 (257)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch-hcCc
Confidence                   68889999999999999999999998754321  1222233334567788899999999999999876 7899


Q ss_pred             cceeeccC
Q 039897          265 TGQVLHPN  272 (272)
Q Consensus       265 tG~~i~id  272 (272)
                      +|+.+++|
T Consensus       231 ~g~~~~~~  238 (257)
T PRK07074        231 TGVCLPVD  238 (257)
T ss_pred             CCcEEEeC
Confidence            99999876

>PLN00015 protochlorophyllide reductase

Probab=99.97  E-value=1.9e-30  Score=225.95  Aligned_cols=219  Identities=20%  Similarity=0.175  Sum_probs=169.1

Q ss_pred             EEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           46 LVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        46 lVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      |||||++|||++++++|+++| ++|++++|+...   +.+...++..    ...++.++.+|+++.++++++++++.+.+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   73 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLK---AERAAKSAGM----PKDSYTVMHLDLASLDSVRQFVDNFRRSG   73 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHH---HHHHHHHhcC----CCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            699999999999999999999 999999987433   3333333321    24567888999999999999999999888


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----CCeEEEecCCCCccC----------
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLWH----------  190 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~g~iv~vsS~~~~~~----------  190 (272)
                      +++|+||||||+.....++.+.+.++|+.+|++|+.|++.+++.++|.|++    +|+||++||..+..+          
T Consensus        74 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  153 (308)
T PLN00015         74 RPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKA  153 (308)
T ss_pred             CCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCcc
Confidence            999999999998543345667899999999999999999999999999964    379999999865310          


Q ss_pred             -------------------------Chh--------------HHHHHHHHhh-CCeEEEEEecccc-cCCCCCCCCCHHH
Q 039897          191 -------------------------SPE--------------ARGLALQLVE-RGIRVNGVAPGPI-WTPLIPSSFSEEE  229 (272)
Q Consensus       191 -------------------------~~~--------------~~~la~e~~~-~gi~vn~i~PG~v-~t~~~~~~~~~~~  229 (272)
                                               .+.              ++.+++++.+ .||+||+|+||+| .|++.........
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~  233 (308)
T PLN00015        154 NLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFR  233 (308)
T ss_pred             chhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHH
Confidence                                     001              4778888865 6999999999999 6888644221111


Q ss_pred             -HHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          230 -SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       230 -~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                       ........+.++..+|++.|..+++|+++. ....+|+.+..|
T Consensus       234 ~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~-~~~~~G~~~~~~  276 (308)
T PLN00015        234 LLFPPFQKYITKGYVSEEEAGKRLAQVVSDP-SLTKSGVYWSWN  276 (308)
T ss_pred             HHHHHHHHHHhcccccHHHhhhhhhhhcccc-ccCCCccccccC
Confidence             000112334556789999999999999887 667899988643

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=7.2e-30  Score=215.26  Aligned_cols=225  Identities=34%  Similarity=0.505  Sum_probs=184.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|++|||||+++||++++++|+++|++|++++|+...   .....+.+..    ...++.++.+|+++.++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~   75 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDD---AAATAELVEA----AGGKARARQVDVRDRAALKAAVA   75 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHH
Confidence            4778999999999999999999999999999999998433   3333333432    34568889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCc-cCChh--
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL-WHSPE--  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~-~~~~~--  193 (272)
                      ++.+.++.+|+||||+|.... .++.+.+.++++..+++|+.+++.+++.+.+.|++  .++||++||..+. .+.+.  
T Consensus        76 ~~~~~~~~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~  154 (251)
T PRK12826         76 AGVEDFGRLDILVANAGIFPL-TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLA  154 (251)
T ss_pred             HHHHHhCCCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCcc
Confidence            999999999999999998653 67778899999999999999999999999999854  4789999998766 33222  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  ++.++.++.+.|++++.+.||.+.|++............+....|.+++.+++|+|+.+.+|++.. .
T Consensus       155 ~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~  233 (251)
T PRK12826        155 HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDE-A  233 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-c
Confidence                        467788888889999999999999987644332222334445667778899999999999998776 6


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|++|++|
T Consensus       234 ~~~~g~~~~~~  244 (251)
T PRK12826        234 RYITGQTLPVD  244 (251)
T ss_pred             cCcCCcEEEEC
Confidence            78899999886

>PRK06182 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.9e-30  Score=222.08  Aligned_cols=213  Identities=30%  Similarity=0.374  Sum_probs=169.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +++|+++|||++||||++++++|+++|++|++++|+...   +.+    +.      ..++.++.+|+++++++++++++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~---l~~----~~------~~~~~~~~~Dv~~~~~~~~~~~~   67 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK---MED----LA------SLGVHPLSLDVTDEASIKAAVDT   67 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHH----HH------hCCCeEEEeeCCCHHHHHHHHHH
Confidence            357999999999999999999999999999999987432   221    11      12477899999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|+||||||+.. ..++.+.+.++|+..+++|+.+++.+++.++|.|++  .++||++||..+..+.+.    
T Consensus        68 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  146 (273)
T PRK06182         68 IIAEEGRIDVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWY  146 (273)
T ss_pred             HHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHh
Confidence            9999999999999999854 467888999999999999999999999999999965  378999999876544332    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--------C---HH----HHHhhccCCCCCCCCCccch
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--------S---EE----ESAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--------~---~~----~~~~~~~~~~~~~~~~~~dv  248 (272)
                                +++++.|+.++||+|++|+||+++|++.....        .   .+    ....+....+.++..+|+|+
T Consensus       147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  226 (273)
T PRK06182        147 HATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVI  226 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHH
Confidence                      56788888899999999999999999752110        0   00    01123334466788899999


Q ss_pred             hhhhhhhhccCC--CCcccc
Q 039897          249 APCYVFLACNHC--SSYITG  266 (272)
Q Consensus       249 a~~~~~L~s~~~--~~~~tG  266 (272)
                      |++++++++..+  ..++.|
T Consensus       227 A~~i~~~~~~~~~~~~~~~g  246 (273)
T PRK06182        227 ADAISKAVTARRPKTRYAVG  246 (273)
T ss_pred             HHHHHHHHhCCCCCceeecC
Confidence            999999998531  345544

>PRK05599 hypothetical protein; Provisional

Probab=99.97  E-value=3.4e-30  Score=217.40  Aligned_cols=197  Identities=19%  Similarity=0.191  Sum_probs=160.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||++|||+++|++|+ +|++|++++|+..   .+++..+++.+.   ...++.++.+|++|+++++++++++.+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~---~~~~~~~~l~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~   73 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPE---AAQGLASDLRQR---GATSVHVLSFDAQDLDTHRELVKQTQE   73 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHH---HHHHHHHHHHhc---cCCceEEEEcccCCHHHHHHHHHHHHH
Confidence            579999999999999999999 5999999999744   344444444431   123477899999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~------  193 (272)
                      .+|++|++|||||+... .++.+.+.+++.+++++|+.+++++++.++|.|.+   +|+||++||.++..+.+.      
T Consensus        74 ~~g~id~lv~nag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  152 (246)
T PRK05599         74 LAGEISLAVVAFGILGD-QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGS  152 (246)
T ss_pred             hcCCCCEEEEecCcCCC-chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhh
Confidence            99999999999998543 34556677888999999999999999999999954   489999999887765443      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                              +++++.|+.++||+||+|+||+++|++.....            +.....+|+|+|+.++++++..
T Consensus       153 sKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~------------~~~~~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        153 TKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK------------PAPMSVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             HHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC------------CCCCCCCHHHHHHHHHHHHhcC
Confidence                    68999999999999999999999999863221            1111358999999999999865

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=1.5e-29  Score=212.69  Aligned_cols=225  Identities=39%  Similarity=0.569  Sum_probs=183.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+++|++||||++|+||++++++|+++|++|+++.++...  ......+++..    .+.++.++.+|+++.+++.++++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   75 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEA--GAEALVAEIGA----LGGKALAVQGDVSDAESVERAVD   75 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchh--HHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHHH
Confidence            4688999999999999999999999999999888886432  22233333332    35678889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||+|.... .++.+.+.+.+++.+++|+.+++++++.+.+.+.+.  ++++++||..+..+.+.   
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~  154 (248)
T PRK05557         76 EAKAEFGGVDILVNNAGITRD-NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQAN  154 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCch
Confidence            999999999999999998543 566778899999999999999999999999998653  68999999866655332   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 +++++.++...+|+++.++||+++|++.... .......+....+.+++.+++|+++.+.+|+.+. ..
T Consensus       155 y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~~  232 (248)
T PRK05557        155 YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL-PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDE-AA  232 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc-ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc-cC
Confidence                       4677788888899999999999999886433 3344444555667777889999999999999875 77


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      +++|++|++|
T Consensus       233 ~~~g~~~~i~  242 (248)
T PRK05557        233 YITGQTLHVN  242 (248)
T ss_pred             CccccEEEec
Confidence            8999999986

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.4e-30  Score=216.59  Aligned_cols=217  Identities=26%  Similarity=0.404  Sum_probs=175.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCC--ChHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLG--FDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~  116 (272)
                      .+++|++||||++++||.+++++|+++|++|++++|+....+   +..+++.+.   ...++.++.+|++  +++++.++
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~---~~~~~l~~~---~~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLE---AVYDEIEAA---GGPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHH---HHHHHHHhc---CCCCceEEEecccCCCHHHHHHH
Confidence            478999999999999999999999999999999999854433   333333321   2345667777775  78999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++.+.+.++++|+||||||......++.+.+.++|++.+++|+.+++++++++.++|++  .++||++||..+..+.+. 
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~  162 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANW  162 (247)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCC
Confidence            99999999999999999998655567788899999999999999999999999999865  478999999866544332 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   ++.++.++...||++++++||++.|++....++.+.         ..++.+|+|+++.+.|++++. 
T Consensus       163 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-  232 (247)
T PRK08945        163 GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGED---------PQKLKTPEDIMPLYLYLMGDD-  232 (247)
T ss_pred             cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCccc---------ccCCCCHHHHHHHHHHHhCcc-
Confidence                         567888888899999999999999987533322211         134678999999999999887 


Q ss_pred             CCcccceeecc
Q 039897          261 SSYITGQVLHP  271 (272)
Q Consensus       261 ~~~~tG~~i~i  271 (272)
                      ..+++|+++..
T Consensus       233 ~~~~~g~~~~~  243 (247)
T PRK08945        233 SRRKNGQSFDA  243 (247)
T ss_pred             ccccCCeEEeC
Confidence            88999999753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=9.4e-30  Score=214.90  Aligned_cols=224  Identities=32%  Similarity=0.434  Sum_probs=177.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++++++++|||||+++||++++++|+++|++|++..++..  +........+.+    .+.++.++.+|+++++++++++
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   75 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRA--EEMNETLKMVKE----NGGEGIGVLADVSTREGCETLA   75 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCh--HHHHHHHHHHHH----cCCeeEEEEeccCCHHHHHHHH
Confidence            4578999999999999999999999999999988776432  233333333333    3456778899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +++.+.++++|+||||||... ..++.+.+.+.+++.+++|+.+.+.+++++.+.|++.++||++||..+..+.+.    
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  154 (252)
T PRK06077         76 KATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIY  154 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHH
Confidence            999999999999999999854 356777889999999999999999999999999988899999999887765543    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---CHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                +++++.++.+ +|+++.+.||+++|++.....   ............+.+++.+++|+|+.++++++.. 
T Consensus       155 ~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~-  232 (252)
T PRK06077        155 GAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIE-  232 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCcc-
Confidence                      5778888877 899999999999998743211   1001111112334567899999999999999643 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                        ..+|+++++|
T Consensus       233 --~~~g~~~~i~  242 (252)
T PRK06077        233 --SITGQVFVLD  242 (252)
T ss_pred             --ccCCCeEEec
Confidence              6789998876

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.4e-30  Score=213.30  Aligned_cols=211  Identities=30%  Similarity=0.404  Sum_probs=173.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |.+|+++||||+++||++++++|+++|++|++++|+....                ..  ..++.+|+++.+++++++++
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~--~~~~~~D~~~~~~~~~~~~~   62 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FP--GELFACDLADIEQTAATLAQ   62 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cC--ceEEEeeCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999975320                11  24689999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.+ ++|+||||+|.... .++.+.+.++|++.+++|+.+++.+++.++|.|++  .++||++||...+ +.+.    
T Consensus        63 ~~~~~-~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~~~~Y  139 (234)
T PRK07577         63 INEIH-PVDAIVNNVGIALP-QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF-GALDRTSY  139 (234)
T ss_pred             HHHhC-CCcEEEECCCCCCC-CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc-CCCCchHH
Confidence            98876 68999999998543 57778899999999999999999999999999965  4799999998532 2221    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                +++++.|+.++||++++|+||++.|++......  ...........+.++..+|+|+|+.+++|++++ .
T Consensus       140 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~-~  218 (234)
T PRK07577        140 SAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDD-A  218 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcc-c
Confidence                      578888999999999999999999998643221  222223344567777889999999999999887 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|+++.+|
T Consensus       219 ~~~~g~~~~~~  229 (234)
T PRK07577        219 GFITGQVLGVD  229 (234)
T ss_pred             CCccceEEEec
Confidence            79999999886

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-29  Score=213.93  Aligned_cols=219  Identities=29%  Similarity=0.400  Sum_probs=173.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..+|++|||||++|||++++++|+++|++|+++.++..  ..+.+...++..    .+.++.++.+|++|.+++.+++++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~   80 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSR--DEAEALAAEIRA----LGRRAVALQADLADEAEVRALVAR   80 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHH
Confidence            46889999999999999999999999999998876532  223333333332    355688899999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|+||||||... ..++.+.+.++|++++++|+.+++++++++.++|++  .++||+++|.....+.+.    
T Consensus        81 ~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y  159 (258)
T PRK09134         81 ASAALGPITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSY  159 (258)
T ss_pred             HHHHcCCCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHH
Confidence            9999999999999999854 357778899999999999999999999999999865  478999988655433332    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.++.+. |+||+|+||++.|....   ............+.++..+++|+|++++++++..   +
T Consensus       160 ~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~---~  232 (258)
T PRK09134        160 TLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQ---SPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAP---S  232 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCccc---ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC---C
Confidence                      56777777655 99999999999886531   1122223334456777889999999999999744   6


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      ++|+.+.+|
T Consensus       233 ~~g~~~~i~  241 (258)
T PRK09134        233 VTGQMIAVD  241 (258)
T ss_pred             cCCCEEEEC
Confidence            899998876

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6e-30  Score=215.21  Aligned_cols=218  Identities=29%  Similarity=0.389  Sum_probs=175.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++++++|||++++||+++++.|+++|++|++++|+.++.+.+   ..         ..+..++.+|+++.+++.++
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~---------~~~~~~~~~D~~~~~~v~~~   71 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRL---AG---------ETGCEPLRLDVGDDAAIRAA   71 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HH---------HhCCeEEEecCCCHHHHHHH
Confidence            3468899999999999999999999999999999999974332221   11         11356789999999988887


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC---CeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG---SAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---g~iv~vsS~~~~~~~~~  193 (272)
                      ++.    .+++|+||||+|... ..++.+.+.++|++.+++|+.+++.+++++.+.+++.   ++||++||..+..+.+.
T Consensus        72 ~~~----~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  146 (245)
T PRK07060         72 LAA----AGAFDGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD  146 (245)
T ss_pred             HHH----hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC
Confidence            765    478999999999854 4566778999999999999999999999999988542   79999999876654432


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.++.+.||++++++||.+.|++...... ......+....+.+++.+++|+++++++|+++
T Consensus       147 ~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~  226 (245)
T PRK07060        147 HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSD  226 (245)
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence                          577888888889999999999999997543222 22233344567788899999999999999988


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..+++|++|.+|
T Consensus       227 ~-~~~~~G~~~~~~  239 (245)
T PRK07060        227 A-ASMVSGVSLPVD  239 (245)
T ss_pred             c-cCCccCcEEeEC
Confidence            7 789999999987

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.9e-31  Score=201.54  Aligned_cols=219  Identities=31%  Similarity=0.445  Sum_probs=186.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .+|-+.|||||.+|+|++.+++|+++|+.|++++..++..+...+.          .+.++.|...|++++++++..+..
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vake----------lg~~~vf~padvtsekdv~aala~   76 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE----------LGGKVVFTPADVTSEKDVRAALAK   76 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH----------hCCceEEeccccCcHHHHHHHHHH
Confidence            5788999999999999999999999999999999987776655543          478899999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCC-----CcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAG-----SVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~-----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~iv~vsS~~  186 (272)
                      .+.+||++|.+|||||+....+     .-...+.++|++++++|+.|+|++++...-.|.+        .|.||++.|++
T Consensus        77 ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasva  156 (260)
T KOG1199|consen   77 AKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVA  156 (260)
T ss_pred             HHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceee
Confidence            9999999999999999864322     2334678999999999999999999999888843        36799999998


Q ss_pred             CccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCC-CCCCccchhhh
Q 039897          187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMK-RAGQPIEVAPC  251 (272)
Q Consensus       187 ~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~  251 (272)
                      .+.+--+              +.-+|++++..|||++.|.||.++||++.. ++++....+...+|.. |...|.|-+..
T Consensus       157 afdgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss-lpekv~~fla~~ipfpsrlg~p~eyahl  235 (260)
T KOG1199|consen  157 AFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS-LPEKVKSFLAQLIPFPSRLGHPHEYAHL  235 (260)
T ss_pred             eecCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh-hhHHHHHHHHHhCCCchhcCChHHHHHH
Confidence            7765433              467789999999999999999999999844 4566666666667764 57799999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +-.+.+..   +++||+|++|
T Consensus       236 vqaiienp---~lngevir~d  253 (260)
T KOG1199|consen  236 VQAIIENP---YLNGEVIRFD  253 (260)
T ss_pred             HHHHHhCc---ccCCeEEEec
Confidence            99888754   9999999987

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=216.55  Aligned_cols=218  Identities=23%  Similarity=0.296  Sum_probs=171.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+++||||++|||++++++|+++|++|++++|+.+   .+.+..+++...   ......++.+|++++++++++++++.+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~---~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDAD---GLAQTVADARAL---GGTVPEHRALDISDYDAVAAFAADIHA   74 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhc---CCCcceEEEeeCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999998743   333334444321   122345578999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~------  193 (272)
                      .++++|+||||+|... ..++.+.+.++|+..+++|+.+++.++++++|.|.+   .++||++||..+..+.+.      
T Consensus        75 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~  153 (272)
T PRK07832         75 AHGSMDVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSA  153 (272)
T ss_pred             hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHH
Confidence            9999999999999854 467788999999999999999999999999999954   479999999876544433      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC------CHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF------SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                              ++.++.|+.++||+|++|+||+++|++.....      .++....+... ..++..+|+|+|+.+++++.. 
T Consensus       154 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~~-  231 (272)
T PRK07832        154 SKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVEK-  231 (272)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHhc-
Confidence                    67888899899999999999999999864321      11111122111 234567999999999999964 


Q ss_pred             CCCcccceeec
Q 039897          260 CSSYITGQVLH  270 (272)
Q Consensus       260 ~~~~~tG~~i~  270 (272)
                       ..+++|+.+.
T Consensus       232 -~~~~~~~~~~  241 (272)
T PRK07832        232 -NRYLVYTSPD  241 (272)
T ss_pred             -CCeEEecCcc
Confidence             5677777654

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-29  Score=215.90  Aligned_cols=209  Identities=25%  Similarity=0.329  Sum_probs=168.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |.+|++|||||+|+||++++++|+++|++|++++|+....+.+   .+.       ...++.++++|++++++++++++.
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   70 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADL---AEK-------YGDRLLPLALDVTDRAAVFAAVET   70 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHh-------ccCCeeEEEccCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999974432222   111       244677889999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|++|||||... ..++.+.+.++|++++++|+.+++++++.++|.|++  .++||++||.++..+.+.    
T Consensus        71 ~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  149 (275)
T PRK08263         71 AVEHFGRLDIVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIY  149 (275)
T ss_pred             HHHHcCCCCEEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHH
Confidence            9999999999999999854 467888999999999999999999999999999965  479999999877665443    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--------HHHHHhhccCCCCCCC-CCccchhhhhhh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--------EEESAQFGSEVPMKRA-GQPIEVAPCYVF  254 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~dva~~~~~  254 (272)
                                ++.++.++.++||+|+.|+||++.|++......        ...........+..++ .+|+|+++.+++
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~  229 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLK  229 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence                      578888888899999999999999998732110        1111223333455666 899999999999


Q ss_pred             hhccC
Q 039897          255 LACNH  259 (272)
Q Consensus       255 L~s~~  259 (272)
                      +++..
T Consensus       230 l~~~~  234 (275)
T PRK08263        230 LVDAE  234 (275)
T ss_pred             HHcCC
Confidence            99864

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-29  Score=215.53  Aligned_cols=199  Identities=27%  Similarity=0.312  Sum_probs=165.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+++++|||||+||||++++++|+++|++|++++|+...   +.+....+        .++.++.+|++++++++++++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~   70 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEAL---AKETAAEL--------GLVVGGPLDVTDPASFAAFLD   70 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHh--------ccceEEEccCCCHHHHHHHHH
Confidence            5778999999999999999999999999999999987433   33222222        146788999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      .+.+.++++|++|||||+.. ..++.+.+.+++++++++|+.+++++++.++|.|++  .++||++||..+..+.+.   
T Consensus        71 ~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  149 (273)
T PRK07825         71 AVEADLGPIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMAT  149 (273)
T ss_pred             HHHHHcCCCCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcc
Confidence            99999999999999999864 467888899999999999999999999999999965  478999999987665443   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                 +++++.|+.+.||+++.|+||++.|++......          .......+++|+|+.+++++...
T Consensus       150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~----------~~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG----------AKGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc----------ccCCCCCCHHHHHHHHHHHHhCC
Confidence                       568888998999999999999999998643210          01123568999999999998765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.97  E-value=2.3e-29  Score=212.50  Aligned_cols=213  Identities=21%  Similarity=0.262  Sum_probs=166.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++++||||+||||.++++.|+++|++|++++|+....   ....+.       .+.++.++.+|+++.++++++++.+.+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~---~~~~~~-------~~~~~~~~~~Dl~~~~~i~~~~~~~~~   70 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL---QELKDE-------LGDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHH-------hccceEEEEecCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999974332   222211       234678899999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-------  193 (272)
                      .++++|+||||+|......++.+.+.++|++++++|+.+++.+++.+++.|++  .++||++||..+..+.+.       
T Consensus        71 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  150 (248)
T PRK10538         71 EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGAT  150 (248)
T ss_pred             HcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHH
Confidence            99999999999998544456778899999999999999999999999999965  378999999876654332       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccccCCCCCC-CCC--HHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-SFS--EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                             ++.++.++.++||+||+|.||++.+++... .+.  .......   .......+|+|+|+++++|++.. ..+
T Consensus       151 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dvA~~~~~l~~~~-~~~  226 (248)
T PRK10538        151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT---YQNTVALTPEDVSEAVWWVATLP-AHV  226 (248)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh---ccccCCCCHHHHHHHHHHHhcCC-Ccc
Confidence                   578888888899999999999998554322 111  1111111   11223468999999999999877 666


Q ss_pred             ccceee
Q 039897          264 ITGQVL  269 (272)
Q Consensus       264 ~tG~~i  269 (272)
                      .+|+..
T Consensus       227 ~~~~~~  232 (248)
T PRK10538        227 NINTLE  232 (248)
T ss_pred             cchhhc
Confidence            666654

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-29  Score=214.44  Aligned_cols=227  Identities=31%  Similarity=0.480  Sum_probs=180.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..++++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.   +...      ..++.++.+|++++++++.
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~---~~~~------~~~~~~~~~D~~~~~~~~~   75 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATA---ARLP------GAKVTATVADVADPAQVER   75 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHh------cCceEEEEccCCCHHHHHH
Confidence            456789999999999999999999999999999999999754333222   2221      1256889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC---CeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG---SAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+.++++|+||||+|.......+...+.++|.+.+++|+.+++++++.+.+.|++.   ++|+++||.++..+.+
T Consensus        76 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~  155 (264)
T PRK12829         76 VFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYP  155 (264)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCC
Confidence            9999999999999999999986445667788999999999999999999999999987552   5689999876554432


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----------HHHHHhhccCCCCCCCCCccch
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----------EEESAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~dv  248 (272)
                      .              ++.++.++...+++++++.||++.|++......          ......+....+..++.+++|+
T Consensus       156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  235 (264)
T PRK12829        156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDI  235 (264)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHH
Confidence            2              567777777789999999999999987532211          1111223334566778999999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++.+++++. ...++|+.|++|
T Consensus       236 a~~~~~l~~~~-~~~~~g~~~~i~  258 (264)
T PRK12829        236 AATALFLASPA-ARYITGQAISVD  258 (264)
T ss_pred             HHHHHHHcCcc-ccCccCcEEEeC
Confidence            99999998765 667899999886

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-29  Score=210.09  Aligned_cols=211  Identities=27%  Similarity=0.331  Sum_probs=169.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|+++||||+++||++++++|+++|++|++++|+.+...   ...+.+.+    ...++.++.+|+++++++.++++.+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   77 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALE---ALAAELRS----TGVKAAAYSIDLSNPEAIAPGIAEL   77 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHHHh----CCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4589999999999999999999999999999999754333   33333332    3567888999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+.++++|+||||+|... ..++.+.+.++++..+++|+.+++++++.+.++|++  .++||++||..+..+.+.     
T Consensus        78 ~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  156 (241)
T PRK07454         78 LEQFGCPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYC  156 (241)
T ss_pred             HHHcCCCCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHH
Confidence            999999999999999854 357788899999999999999999999999999865  478999999876654432     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcc
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI  264 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~  264 (272)
                               ++.++.++.+.||++++|.||++.|++.......       ......+..+++|+|+++++|++++ ...+
T Consensus       157 ~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~-------~~~~~~~~~~~~~va~~~~~l~~~~-~~~~  228 (241)
T PRK07454        157 VSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ-------ADFDRSAMLSPEQVAQTILHLAQLP-PSAV  228 (241)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc-------cccccccCCCHHHHHHHHHHHHcCC-ccce
Confidence                     5778888888999999999999999985321100       0111234568999999999999877 4444


Q ss_pred             cce
Q 039897          265 TGQ  267 (272)
Q Consensus       265 tG~  267 (272)
                      .++
T Consensus       229 ~~~  231 (241)
T PRK07454        229 IED  231 (241)
T ss_pred             eee
Confidence            443

>PRK05855 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.5e-29  Score=236.20  Aligned_cols=214  Identities=28%  Similarity=0.358  Sum_probs=173.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+.++++|||||+||||++++++|+++|++|++++|+...   +.+..+++.+    .+.++.++.+|+++++++.+++
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~  383 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAA---AERTAELIRA----AGAVAHAYRVDVSDADAMEAFA  383 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHH
Confidence            45778999999999999999999999999999999997443   3333334433    3557889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++   +|+||++||.+++.+.+. 
T Consensus       384 ~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  462 (582)
T PRK05855        384 EWVRAEHGVPDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL  462 (582)
T ss_pred             HHHHHhcCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC
Confidence            999999999999999999954 467888999999999999999999999999999965   379999999988766544 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----CHHH---HHhhccCCCCCCCCCccchhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----SEEE---SAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                                   +++++.|++++||+|++|+||+|+|++.....    ..+.   ........+..+..+|+|+|+.++
T Consensus       463 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~  542 (582)
T PRK05855        463 PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIV  542 (582)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHH
Confidence                         67889999999999999999999999865421    1111   111111222334568999999999


Q ss_pred             hhhccC
Q 039897          254 FLACNH  259 (272)
Q Consensus       254 ~L~s~~  259 (272)
                      +.++..
T Consensus       543 ~~~~~~  548 (582)
T PRK05855        543 DAVKRN  548 (582)
T ss_pred             HHHHcC
Confidence            999764

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=6.2e-29  Score=208.72  Aligned_cols=224  Identities=37%  Similarity=0.539  Sum_probs=183.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|.+|++||||++++||.+++++|+++|++|++++|+..+..   ....++..    .+.++.++.+|+++++++.++++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAE---ALAAELRA----AGGEARVLVFDVSDEAAVRALIE   74 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHH---HHHHHHHh----cCCceEEEEccCCCHHHHHHHHH
Confidence            577899999999999999999999999999999999854433   23333332    45678889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++.+|++||++|.... .++.+.+.+++.+.++.|+.+++++++++.++|++  .++||++||..+..+...   
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~  153 (246)
T PRK05653         75 AAVEAFGALDILVNNAGITRD-ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTN  153 (246)
T ss_pred             HHHHHhCCCCEEEECCCcCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcH
Confidence            999888999999999998543 56777889999999999999999999999999855  369999999765444321   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 ++.++.++.+.|++++.++||.+.+++... ......+.+....+.+.+.+++|+++.+.+++++. ..
T Consensus       154 y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~-~~  231 (246)
T PRK05653        154 YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDA-AS  231 (246)
T ss_pred             hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch-hc
Confidence                       567778888889999999999999987643 22333334445567778889999999999999876 77


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      .++|++|++|
T Consensus       232 ~~~g~~~~~~  241 (246)
T PRK05653        232 YITGQVIPVN  241 (246)
T ss_pred             CccCCEEEeC
Confidence            8899999886

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.4e-28  Score=206.83  Aligned_cols=225  Identities=35%  Similarity=0.531  Sum_probs=180.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+..|++|||||+|+||++++++|+++|++|+++.++...  ........+..    .+.++.++.+|+++++++.++++
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~   76 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEE--AAEELVEAVEA----LGRRAQAVQADVTDKAALEAAVA   76 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHHHh----cCCceEEEECCcCCHHHHHHHHH
Confidence            4667899999999999999999999999998887665432  22222333322    35678899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++.+|++||++|... ..++.+.+.+++++.+++|+.+++++++.+.+++++  .+++|++||..+..+.+.   
T Consensus        77 ~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~  155 (249)
T PRK12825         77 AAVERFGRIDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSN  155 (249)
T ss_pred             HHHHHcCCCCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchH
Confidence            99998899999999999743 466778899999999999999999999999998865  368999999877655432   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 ++.++.++.+.|++++.++||.+.|++............ ....+.++..+++|+++.+.+++++. ..
T Consensus       156 y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~-~~  233 (249)
T PRK12825        156 YAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK-DAETPLGRSGTPEDIARAVAFLCSDA-SD  233 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh-hccCCCCCCcCHHHHHHHHHHHhCcc-cc
Confidence                       466777777789999999999999998755433222221 22456777889999999999999877 77


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      ..+|+++++|
T Consensus       234 ~~~g~~~~i~  243 (249)
T PRK12825        234 YITGQVIEVT  243 (249)
T ss_pred             CcCCCEEEeC
Confidence            8999999886

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.5e-29  Score=213.56  Aligned_cols=208  Identities=28%  Similarity=0.337  Sum_probs=166.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+|++|||||+||||++++++|+++|++|++++|+....+.+   ...       .+.++.++.+|+++++++.++++.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l---~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~   72 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF---EAL-------HPDRALARLLDVTDFDAIDAVVADA   72 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHH---Hhh-------cCCCeeEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999974432222   111       2456788999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+.++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++  .++||++||.++..+.+.     
T Consensus        73 ~~~~~~~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~  151 (277)
T PRK06180         73 EATFGPIDVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYC  151 (277)
T ss_pred             HHHhCCCCEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhH
Confidence            999999999999999854 467888999999999999999999999999999865  478999999877665443     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC------HHHH------HhhccCCCCCCCCCccchhhhh
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS------EEES------AQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~------~~~~------~~~~~~~~~~~~~~~~dva~~~  252 (272)
                               +++++.++.+.|++|++|+||++.|++......      .+..      .......+..++.+|+|+|+++
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (277)
T PRK06180        152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAI  231 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHH
Confidence                     567888888889999999999999987432111      1110      1111223455677999999999


Q ss_pred             hhhhccC
Q 039897          253 VFLACNH  259 (272)
Q Consensus       253 ~~L~s~~  259 (272)
                      ++++...
T Consensus       232 ~~~l~~~  238 (277)
T PRK06180        232 LAAVESD  238 (277)
T ss_pred             HHHHcCC
Confidence            9998764

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-29  Score=219.04  Aligned_cols=215  Identities=21%  Similarity=0.229  Sum_probs=160.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.+.   ..+..+++.+..  ...++.++.+|+++.+++++++
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~---~~~~~~~l~~~~--~~~~v~~~~~Dl~d~~sv~~~~   84 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAK---GEAAVAAIRTAV--PDAKLSLRALDLSSLASVAALG   84 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHhC--CCCceEEEEecCCCHHHHHHHH
Confidence            56889999999999999999999999999999999998443   444444443321  2346888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCC-----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~-----  191 (272)
                      +++.+.++++|+||||||+...  +....+.++|+.++++|+.+++.+++.++|.|++ .++||++||.++..+.     
T Consensus        85 ~~~~~~~~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~  162 (313)
T PRK05854         85 EQLRAEGRPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDD  162 (313)
T ss_pred             HHHHHhCCCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccc
Confidence            9999999999999999998542  3445688999999999999999999999999965 4899999998764321     


Q ss_pred             -------hh--------------HHHHHHHH--hhCCeEEEEEecccccCCCCCCCCC-----HHHHHhhccCC-CCC-C
Q 039897          192 -------PE--------------ARGLALQL--VERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEV-PMK-R  241 (272)
Q Consensus       192 -------~~--------------~~~la~e~--~~~gi~vn~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~-~~~-~  241 (272)
                             +.              ++.|+.++  ...||+||+++||+|.|++......     ......+.... ... .
T Consensus       163 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (313)
T PRK05854        163 LNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFL  242 (313)
T ss_pred             ccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccc
Confidence                   11              45555543  3468999999999999998643210     00111111100 001 1


Q ss_pred             CCCccchhhhhhhhhccC
Q 039897          242 AGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~  259 (272)
                      +.++++-+...++++.++
T Consensus       243 ~~~~~~ga~~~l~~a~~~  260 (313)
T PRK05854        243 VGTVESAILPALYAATSP  260 (313)
T ss_pred             cCCHHHHHHHhhheeeCC
Confidence            347788888888877543

>PRK06196 oxidoreductase; Provisional

Probab=99.97  E-value=4.6e-29  Score=217.90  Aligned_cols=208  Identities=27%  Similarity=0.327  Sum_probs=160.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+...   ..+..+++.        ++.++.+|+++.+++++++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~---~~~~~~~l~--------~v~~~~~Dl~d~~~v~~~~   90 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDV---AREALAGID--------GVEVVMLDLADLESVRAFA   90 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhh--------hCeEEEccCCCHHHHHHHH
Confidence            45789999999999999999999999999999999997433   333333221        2678999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccC-----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWH-----  190 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~-----  190 (272)
                      +++.+.++++|+||||||+...  + ...+.++|+..+++|+.+++++++.++|.|++.  ++||++||.....+     
T Consensus        91 ~~~~~~~~~iD~li~nAg~~~~--~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~  167 (315)
T PRK06196         91 ERFLDSGRRIDILINNAGVMAC--P-ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWD  167 (315)
T ss_pred             HHHHhcCCCCCEEEECCCCCCC--C-CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcc
Confidence            9999999999999999998532  2 345678899999999999999999999998663  79999999754211     


Q ss_pred             -------Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHH-hhcc--CCCCC-CCCCc
Q 039897          191 -------SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA-QFGS--EVPMK-RAGQP  245 (272)
Q Consensus       191 -------~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~-~~~~--~~~~~-~~~~~  245 (272)
                             .+.              ++.++.++.++||+||+|+||++.|++........... .+..  ..++. ++.+|
T Consensus       168 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (315)
T PRK06196        168 DPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTP  247 (315)
T ss_pred             ccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCH
Confidence                   111              56778888889999999999999999864332211111 1110  11222 46789


Q ss_pred             cchhhhhhhhhccC
Q 039897          246 IEVAPCYVFLACNH  259 (272)
Q Consensus       246 ~dva~~~~~L~s~~  259 (272)
                      +|+|..++||++..
T Consensus       248 ~~~a~~~~~l~~~~  261 (315)
T PRK06196        248 AQGAATQVWAATSP  261 (315)
T ss_pred             hHHHHHHHHHhcCC
Confidence            99999999999765

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=213.62  Aligned_cols=217  Identities=24%  Similarity=0.261  Sum_probs=167.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||+||||.+++++|+++|++|++++|+...  .......++..    .+.++.++.+|+++++++.+++
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~--~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~   75 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAP--RANKVVAEIEA----AGGRASAVGADLTDEESVAALM   75 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchH--hHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHH
Confidence            34789999999999999999999999999999999886432  22223333332    3456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc-----CCh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW-----HSP  192 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~-----~~~  192 (272)
                      +++.+.++.+|+||||||.... .   ..   ++...+++|+.+++++++++.++|+++++||++||..+..     ..+
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~~~-~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~  148 (248)
T PRK07806         76 DTAREEFGGLDALVLNASGGME-S---GM---DEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMP  148 (248)
T ss_pred             HHHHHhCCCCcEEEECCCCCCC-C---CC---CcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCc
Confidence            9999999999999999987421 1   11   2456789999999999999999998778999999954321     111


Q ss_pred             ----h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---CHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          193 ----E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       193 ----~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                          .          +++++.++++.||+||+|.||++.|++.....   .+....  ..+.|.+++.+|+|+|++++++
T Consensus       149 ~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l  226 (248)
T PRK07806        149 EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE--ARREAAGKLYTVSEFAAEVARA  226 (248)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH--HHHhhhcccCCHHHHHHHHHHH
Confidence                1          67888899999999999999999987643211   111111  2245778899999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      ++.   .+++|++|++|
T Consensus       227 ~~~---~~~~g~~~~i~  240 (248)
T PRK07806        227 VTA---PVPSGHIEYVG  240 (248)
T ss_pred             hhc---cccCccEEEec
Confidence            984   47899999875

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=213.21  Aligned_cols=219  Identities=18%  Similarity=0.195  Sum_probs=172.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||++|||++++++|+++|++|++++|+..+  .+.+..    +   ..+.++.++.+|++++++++++++++.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~--~~~~~~----~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK--ELTKLA----E---QYNSNLTFHSLDLQDVHELETNFNEILS   72 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH--HHHHHH----h---ccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999987421  222211    1   1345688899999999999999999887


Q ss_pred             hcCCc----cEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh--
Q 039897          123 AYGKI----DILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       123 ~~g~l----d~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~--  193 (272)
                      .++..    .++|||+|......++.+.+.++|.+.+++|+.+++.+++.++++|++   .++||++||..+..+.+.  
T Consensus        73 ~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  152 (251)
T PRK06924         73 SIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWS  152 (251)
T ss_pred             hcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcH
Confidence            76532    289999998655567888999999999999999999999999999865   368999999877655543  


Q ss_pred             ------------HHHHHHHHh--hCCeEEEEEecccccCCCCCCC--C-CH--HHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 ------------ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSS--F-SE--EESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 ------------~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~--~-~~--~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                                  ++.++.|++  +.||+||+|.||++.|++....  . .+  ...+.+....+.+++.+|+|+|+.+++
T Consensus       153 ~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  232 (251)
T PRK06924        153 AYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRN  232 (251)
T ss_pred             HHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHH
Confidence                        577788875  4689999999999999875321  0 01  112233334466788999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++  ..+++|+.+.+|
T Consensus       233 l~~~--~~~~~G~~~~v~  248 (251)
T PRK06924        233 LLET--EDFPNGEVIDID  248 (251)
T ss_pred             HHhc--ccCCCCCEeehh
Confidence            9986  358999999876

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=7.3e-29  Score=236.55  Aligned_cols=225  Identities=33%  Similarity=0.506  Sum_probs=186.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+.||++|||||+||||+++++.|+++|++|++++|+...   +.....++..     ..++.++.+|+++++++.+++
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~---~~~~~~~l~~-----~~~v~~v~~Dvtd~~~v~~~~  489 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA---AEAAAAELGG-----PDRALGVACDVTDEAAVQAAF  489 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHH---HHHHHHHHhc-----cCcEEEEEecCCCHHHHHHHH
Confidence            34789999999999999999999999999999999998543   3333333321     146788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.+|++|+||||||... ..++.+.+.++|+..+++|+.+++.+++.+.+.|++   +++||++||..+..+.+. 
T Consensus       490 ~~~~~~~g~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~  568 (681)
T PRK08324        490 EEAALAFGGVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNF  568 (681)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCc
Confidence            999999999999999999854 467888899999999999999999999999999976   489999999877665433 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccc--cCCCCCCCC----------C-HHHHHhhccCCCCCCCCCccc
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPI--WTPLIPSSF----------S-EEESAQFGSEVPMKRAGQPIE  247 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v--~t~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~d  247 (272)
                                   ++.++.++.+.||+||.|+||.+  .|.+.....          . .+..+.+....++++..+++|
T Consensus       569 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~D  648 (681)
T PRK08324        569 GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPED  648 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHH
Confidence                         67888889889999999999999  787653321          1 111234556677888999999


Q ss_pred             hhhhhhhhhccCCCCcccceeeccC
Q 039897          248 VAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       248 va~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +|+++++++++. ....+|+++++|
T Consensus       649 vA~a~~~l~s~~-~~~~tG~~i~vd  672 (681)
T PRK08324        649 VAEAVVFLASGL-LSKTTGAIITVD  672 (681)
T ss_pred             HHHHHHHHhCcc-ccCCcCCEEEEC
Confidence            999999999866 778999999987

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-28  Score=212.21  Aligned_cols=205  Identities=27%  Similarity=0.303  Sum_probs=162.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ...+++|++|||||+||||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|++|++++.++
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~---l~~~~~~l~~----~~~~~~~~~~Dl~d~~~v~~~  107 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDL---LDAVADRITR----AGGDAMAVPCDLSDLDAVDAL  107 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            466889999999999999999999999999999999998433   3333333332    355678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccC--CHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccC-C
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEI--DEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWH-S  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~-~  191 (272)
                      ++.+.+.++++|++|||||+... .++.+.  +.++++..+++|+.++++++++++|+|++  .++||++||.++... .
T Consensus       108 ~~~~~~~~g~id~li~~AG~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  186 (293)
T PRK05866        108 VADVEKRIGGVDILINNAGRSIR-RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS  186 (293)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC-cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC
Confidence            99999999999999999998543 444432  46889999999999999999999999965  479999999754431 2


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      +.              +++++.|+.++||+|++|+||+++|++.....      ..    ......+|+++|+.++..+.
T Consensus       187 p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~------~~----~~~~~~~pe~vA~~~~~~~~  256 (293)
T PRK05866        187 PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK------AY----DGLPALTADEAAEWMVTAAR  256 (293)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc------cc----cCCCCCCHHHHHHHHHHHHh
Confidence            21              67889999999999999999999999874311      00    01123589999999888876


Q ss_pred             cC
Q 039897          258 NH  259 (272)
Q Consensus       258 ~~  259 (272)
                      ..
T Consensus       257 ~~  258 (293)
T PRK05866        257 TR  258 (293)
T ss_pred             cC
Confidence            54

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.7e-29  Score=207.06  Aligned_cols=217  Identities=29%  Similarity=0.405  Sum_probs=174.2

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      |+.++++|++||||++|+||++++++|+++|++|++++|+......   ..+++.      ......+.+|+++.+++++
T Consensus         1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~---~~~~~~------~~~~~~~~~D~~~~~~~~~   71 (239)
T PRK12828          1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQ---TLPGVP------ADALRIGGIDLVDPQAARR   71 (239)
T ss_pred             CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHH---HHHHHh------hcCceEEEeecCCHHHHHH
Confidence            3456889999999999999999999999999999999998543322   222222      2245678899999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.++++|+|||++|... ...+.+.+.+++++.+++|+.+++.+++++.+.|++  .++||++||..+..+.+.
T Consensus        72 ~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  150 (239)
T PRK12828         72 AVDEVNRQFGRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG  150 (239)
T ss_pred             HHHHHHHHhCCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC
Confidence            99999999999999999999854 356677789999999999999999999999998854  479999999876554322


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    ++.++.++.+.||+++.+.||++.|++........         ....+.+++|+++.+++++++.
T Consensus       151 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~~l~~~  221 (239)
T PRK12828        151 MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDA---------DFSRWVTPEQIAAVIAFLLSDE  221 (239)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCch---------hhhcCCCHHHHHHHHHHHhCcc
Confidence                          45667777778999999999999998643322111         1233568999999999999876


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       ..+++|+.+.+|
T Consensus       222 -~~~~~g~~~~~~  233 (239)
T PRK12828        222 -AQAITGASIPVD  233 (239)
T ss_pred             -cccccceEEEec
Confidence             668899999876

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.4e-29  Score=216.72  Aligned_cols=224  Identities=26%  Similarity=0.322  Sum_probs=171.7

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           34 YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        34 ~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      .....++.+++++|||+++|||+++|+.|+.+|++|++.+|+.+.   .++..+.+..  .....++.++++|+++.+++
T Consensus        27 ~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~---~~~~~~~i~~--~~~~~~i~~~~lDLssl~SV  101 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEER---GEEAKEQIQK--GKANQKIRVIQLDLSSLKSV  101 (314)
T ss_pred             eeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHH---HHHHHHHHHh--cCCCCceEEEECCCCCHHHH
Confidence            444677899999999999999999999999999999999999544   4444444443  22567788999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCc---
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPL---  188 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~---  188 (272)
                      .++++++...++++|++|||||++....   ..+.|.++..|.+|+.|+|.+++.++|.|++.  +|||++||..+.   
T Consensus       102 ~~fa~~~~~~~~~ldvLInNAGV~~~~~---~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~  178 (314)
T KOG1208|consen  102 RKFAEEFKKKEGPLDVLINNAGVMAPPF---SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKI  178 (314)
T ss_pred             HHHHHHHHhcCCCccEEEeCcccccCCc---ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCcc
Confidence            9999999999999999999999975432   67788999999999999999999999999875  799999997651   


Q ss_pred             -------------cCCh-h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCC
Q 039897          189 -------------WHSP-E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQ  244 (272)
Q Consensus       189 -------------~~~~-~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (272)
                                   .... .          ++.|++.+.+ ||.+++++||.|.|+.+.+ . .-....+.......-..+
T Consensus       179 ~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~-~~~~~~l~~~l~~~~~ks  255 (314)
T KOG1208|consen  179 DLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-V-NLLLRLLAKKLSWPLTKS  255 (314)
T ss_pred             chhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-c-hHHHHHHHHHHHHHhccC
Confidence                         1101 0          5677777766 9999999999999994434 1 111111212222222247


Q ss_pred             ccchhhhhhhhhccCCCCccccee
Q 039897          245 PIEVAPCYVFLACNHCSSYITGQV  268 (272)
Q Consensus       245 ~~dva~~~~~L~s~~~~~~~tG~~  268 (272)
                      +++-|++.++.+..++-...+|..
T Consensus       256 ~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  256 PEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             HHHHhhheehhccCccccCccccc
Confidence            888999999888765455555543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.97  E-value=1.1e-28  Score=215.44  Aligned_cols=222  Identities=19%  Similarity=0.180  Sum_probs=164.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .+|++|||||++|||+++++.|+++| ++|++++|+...   ..+..+++..    ...++.++.+|+++.+++++++++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~~~~   74 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK---AEQAAKSLGM----PKDSYTIMHLDLGSLDSVRQFVQQ   74 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH---HHHHHHHhcC----CCCeEEEEEcCCCCHHHHHHHHHH
Confidence            48899999999999999999999999 999999987443   3333333321    345677889999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC----CeEEEecCCCCccC-----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG----SAIINTTSVEPLWH-----  190 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----g~iv~vsS~~~~~~-----  190 (272)
                      +.+.++++|+||||||+.....+....+.++|+.++++|+.+++++++.++|.|++.    ++||++||..+...     
T Consensus        75 ~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~  154 (314)
T TIGR01289        75 FRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGN  154 (314)
T ss_pred             HHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCc
Confidence            988889999999999985433334567899999999999999999999999999653    79999999865311     


Q ss_pred             --------------------------C---h---h----------HHHHHHHHh-hCCeEEEEEecccc-cCCCCCCCCC
Q 039897          191 --------------------------S---P---E----------ARGLALQLV-ERGIRVNGVAPGPI-WTPLIPSSFS  226 (272)
Q Consensus       191 --------------------------~---~---~----------~~~la~e~~-~~gi~vn~i~PG~v-~t~~~~~~~~  226 (272)
                                                .   +   +          ++.+++++. +.||+|++|+||.| .|++......
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~  234 (314)
T TIGR01289       155 VPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVP  234 (314)
T ss_pred             CCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccH
Confidence                                      0   0   0          567777774 46899999999999 6988643221


Q ss_pred             HHH-HHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeec
Q 039897          227 EEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH  270 (272)
Q Consensus       227 ~~~-~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~  270 (272)
                      ... ......+.....+.++++.+..+++++.+. ....+|..+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~-~~~~~g~~~~  278 (314)
T TIGR01289       235 LFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDP-KLKKSGVYWS  278 (314)
T ss_pred             HHHHHHHHHHHHHhccccchhhhhhhhHHhhcCc-ccCCCceeee
Confidence            110 000001111233568999999999988765 3335676553

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.97  E-value=3.4e-30  Score=205.35  Aligned_cols=212  Identities=26%  Similarity=0.324  Sum_probs=169.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++++||.+++||+.||||++++++|+++|.++.+++-+.++.+..    ..+.+.  .+..++.|++||+++..++++.+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~----akL~ai--~p~~~v~F~~~DVt~~~~~~~~f   74 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI----AKLQAI--NPSVSVIFIKCDVTNRGDLEAAF   74 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH----HHHhcc--CCCceEEEEEeccccHHHHHHHH
Confidence            468899999999999999999999999999988887765543322    223322  26788999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCccCCh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~~~~  192 (272)
                      +++.+.+|.+|++||+||+..         ..+|++++.+|+.|..+-+...+|+|.+     +|-|||+||+.++.+.|
T Consensus        75 ~ki~~~fg~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p  145 (261)
T KOG4169|consen   75 DKILATFGTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP  145 (261)
T ss_pred             HHHHHHhCceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccc
Confidence            999999999999999999953         4569999999999999999999999954     47899999999999987


Q ss_pred             h--------------HHHHHH--HHhhCCeEEEEEecccccCCCCCCC--------CCHHHHHhhccCCCCCCCCCccch
Q 039897          193 E--------------ARGLAL--QLVERGIRVNGVAPGPIWTPLIPSS--------FSEEESAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       193 ~--------------~~~la~--e~~~~gi~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dv  248 (272)
                      .              +|++|.  .|.+.||+++++|||++.|++....        +.+...+.+.    ......|.++
T Consensus       146 ~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~----~~~~q~~~~~  221 (261)
T KOG4169|consen  146 VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALE----RAPKQSPACC  221 (261)
T ss_pred             cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHH----HcccCCHHHH
Confidence            6              567654  4667899999999999999865321        1223333322    1224578899


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +..++..++..    .+|+++.+|
T Consensus       222 a~~~v~aiE~~----~NGaiw~v~  241 (261)
T KOG4169|consen  222 AINIVNAIEYP----KNGAIWKVD  241 (261)
T ss_pred             HHHHHHHHhhc----cCCcEEEEe
Confidence            99999998764    677776654

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.2e-29  Score=207.74  Aligned_cols=207  Identities=29%  Similarity=0.411  Sum_probs=164.5

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhcC
Q 039897           46 LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYG  125 (272)
Q Consensus        46 lVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (272)
                      |||||++|||++++++|+++|++|++++|+..   .+.....++.     .+.++.++.+|+++++++.+++++    .+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~---~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~----~~   68 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRD---RLAAAARALG-----GGAPVRTAALDITDEAAVDAFFAE----AG   68 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHh-----cCCceEEEEccCCCHHHHHHHHHh----cC
Confidence            69999999999999999999999999999743   3333333332     245678899999999999888875    47


Q ss_pred             CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh------------
Q 039897          126 KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------------  193 (272)
Q Consensus       126 ~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~------------  193 (272)
                      ++|+||||+|.... .++.+.+.+++++++++|+.+++++++  .+.|.+.++||++||.++..+.+.            
T Consensus        69 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         69 PFDHVVITAADTPG-GPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALE  145 (230)
T ss_pred             CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHH
Confidence            89999999998653 577788999999999999999999999  556677799999999987665433            


Q ss_pred             --HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC---HHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccccee
Q 039897          194 --ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS---EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV  268 (272)
Q Consensus       194 --~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~  268 (272)
                        +++++.|+..  |+||+++||++.|++......   ...........+.++..+|+|+|+.+++|++.   .+++|++
T Consensus       146 ~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~---~~~~G~~  220 (230)
T PRK07041        146 ALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN---GFTTGST  220 (230)
T ss_pred             HHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC---CCcCCcE
Confidence              5677777754  999999999999998643211   11222334456777888999999999999974   4899999


Q ss_pred             eccC
Q 039897          269 LHPN  272 (272)
Q Consensus       269 i~id  272 (272)
                      +++|
T Consensus       221 ~~v~  224 (230)
T PRK07041        221 VLVD  224 (230)
T ss_pred             EEeC
Confidence            9886

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=2.4e-28  Score=205.74  Aligned_cols=224  Identities=33%  Similarity=0.498  Sum_probs=174.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++++++|||||+|+||++++++|+++|++|++++|+...  .+......+.+.   ....+.++.+|+++.+++..+++.
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~   78 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAA--EADALAAELNAL---RPGSAAALQADLLDPDALPELVAA   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHHHHhh---cCCceEEEEcCCCCHHHHHHHHHH
Confidence            567899999999999999999999999999999986432  122222222211   234578899999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +.+.++++|+||||||.... .++.+.+.++++..+++|+.+++++++++.++|.+ .+.++++++.....+.+.     
T Consensus        79 ~~~~~~~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  157 (249)
T PRK09135         79 CVAAFGRLDALVNNASSFYP-TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYC  157 (249)
T ss_pred             HHHHcCCCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHH
Confidence            99999999999999998543 56677788999999999999999999999999855 578888887654433222     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcc
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI  264 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~  264 (272)
                               ++.++.++.+ +++++++.||++.|++....+............+.....+++|+++++.+++.+  ....
T Consensus       158 ~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~  234 (249)
T PRK09135        158 AAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD--ASFI  234 (249)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc--cccc
Confidence                     4556666644 699999999999999865444444444444555667778899999999888864  4467


Q ss_pred             cceeeccC
Q 039897          265 TGQVLHPN  272 (272)
Q Consensus       265 tG~~i~id  272 (272)
                      +|+++++|
T Consensus       235 ~g~~~~i~  242 (249)
T PRK09135        235 TGQILAVD  242 (249)
T ss_pred             cCcEEEEC
Confidence            99999875

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-28  Score=209.83  Aligned_cols=205  Identities=23%  Similarity=0.296  Sum_probs=166.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +++++++|||||++|||.+++++|+++|++|++++|+....+   +...++ +    .+.++.++.+|+++++++.++++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~-~----~~~~~~~~~~D~~d~~~~~~~~~   73 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE---ALAARL-P----YPGRHRWVVADLTSEAGREAVLA   73 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH---HHHHHH-h----cCCceEEEEccCCCHHHHHHHHH
Confidence            578999999999999999999999999999999999744333   333333 1    35578899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~~~~---  193 (272)
                      .+.+ ++++|+||||||... ..++.+.+.+++++.+++|+.+++++++.++++|++.  ++|+++||..+..+.++   
T Consensus        74 ~~~~-~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  151 (263)
T PRK09072         74 RARE-MGGINVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYAS  151 (263)
T ss_pred             HHHh-cCCCCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccH
Confidence            9876 789999999999854 4678888999999999999999999999999999664  78999999877655443   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                 +++++.++.++||+|++|+||+++|++.....     ..... ....+..+++|+|+.++++++..
T Consensus       152 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~-~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        152 YCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-----QALNR-ALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc-----ccccc-cccCCCCCHHHHHHHHHHHHhCC
Confidence                       57888999899999999999999998753211     11111 11235678999999999999765

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-28  Score=209.03  Aligned_cols=199  Identities=24%  Similarity=0.278  Sum_probs=159.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||++|||.+++++|+++|++|++++|+.+.   +.+..+++.     ...++.++.+|+++++++.++++++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~-----~~~~~~~~~~Dl~~~~~i~~~~~~~~   73 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDA---LQAFAARLP-----KAARVSVYAADVRDADALAAAAADFI   73 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhcc-----cCCeeEEEEcCCCCHHHHHHHHHHHH
Confidence            4799999999999999999999999999999998433   333222221     11278899999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~------  193 (272)
                      ++++.+|++|||+|.........+.+.++|+..+++|+.+++++++.++|.|++  .++||++||.++..+.+.      
T Consensus        74 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  153 (257)
T PRK07024         74 AAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSA  153 (257)
T ss_pred             HhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHH
Confidence            999999999999998543223333788999999999999999999999999955  489999999887765443      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                              +++++.|+.++||+|++|+||++.|++....           ..+.....+|++++..++..+...
T Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        154 SKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-----------PYPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-----------CCCCCCccCHHHHHHHHHHHHhCC
Confidence                    5788888889999999999999999975321           011122357899999999888764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3.6e-28  Score=203.89  Aligned_cols=214  Identities=26%  Similarity=0.351  Sum_probs=171.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.++++++++|||++++||.+++++|+++|++|++++|+....   .+..+++..    .+.++.++.+|+++++++.++
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~---~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~   74 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL---KAVAEEVEA----YGVKVVIATADVSDYEEVTAA   74 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHH----hCCeEEEEECCCCCHHHHHHH
Confidence            4557889999999999999999999999999999999985433   333333332    345788899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||+|... ...+.+.+.++|++.+++|+.+++++++++.+.|.+  .+++|++||..+..+.+. 
T Consensus        75 ~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~  153 (239)
T PRK07666         75 IEQLKNELGSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVT  153 (239)
T ss_pred             HHHHHHHcCCccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCC
Confidence            9999999999999999999854 356778899999999999999999999999999855  478999999876655432 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   ++.++.++.+.||+++.|+||.+.|++.....       ..... .....+++|+|+.++.+++...
T Consensus       154 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~-------~~~~~-~~~~~~~~~~a~~~~~~l~~~~  225 (239)
T PRK07666        154 SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG-------LTDGN-PDKVMQPEDLAEFIVAQLKLNK  225 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc-------ccccC-CCCCCCHHHHHHHHHHHHhCCC
Confidence                         57788888889999999999999999753211       00111 1345689999999999998764


Q ss_pred             CCcccc
Q 039897          261 SSYITG  266 (272)
Q Consensus       261 ~~~~tG  266 (272)
                      ..++++
T Consensus       226 ~~~~~~  231 (239)
T PRK07666        226 RTFIKS  231 (239)
T ss_pred             ceEEEE
Confidence            444443

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-28  Score=209.27  Aligned_cols=209  Identities=24%  Similarity=0.300  Sum_probs=167.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||+||||++++++|+++|++|++++|+..   .+++...++..    .+.++.++.+|+++++++.++++.+.+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~---~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~~i~~   73 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEE---GGEETLKLLRE----AGGDGFYQRCDVRDYSQLTALAQACEE   73 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999999998743   34444444433    456788899999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-------  193 (272)
                      .++++|+||||||... ...+.+.+.++|++.+++|+.+++.+++.++|.|++  .++||++||..+..+.+.       
T Consensus        74 ~~~~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  152 (270)
T PRK05650         74 KWGGIDVIVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVA  152 (270)
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHH
Confidence            9999999999999854 367888899999999999999999999999999965  379999999877665443       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                             +++++.|+.+.||++++|+||+++|++....... ................+++|+|+.++..+...
T Consensus       153 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        153 KAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence                   5788999988999999999999999987543211 11111111111223468999999999998765

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-28  Score=211.93  Aligned_cols=205  Identities=25%  Similarity=0.309  Sum_probs=161.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+|++|||||+||||++++++|+++|++|++++|+....+.       +.+      .++.++.+|++++++++++++.+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-------l~~------~~~~~~~~Dl~d~~~~~~~~~~~   69 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-------LEA------EGLEAFQLDYAEPESIAALVAQV   69 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-------HHH------CCceEEEccCCCHHHHHHHHHHH
Confidence            36899999999999999999999999999999997433221       211      24678899999999999999999


Q ss_pred             HHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          121 VNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       121 ~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      .+.+ +++|+||||||+.. ..++.+.+.++++..+++|+.|++.+++.++|.|++  .++||++||..+..+.+.    
T Consensus        70 ~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  148 (277)
T PRK05993         70 LELSGGRLDALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAY  148 (277)
T ss_pred             HHHcCCCccEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchH
Confidence            8776 68999999999854 467888899999999999999999999999999975  479999999877655433    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-------------HHH----Hhhcc-CCCCCCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-------------EES----AQFGS-EVPMKRAGQP  245 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-------------~~~----~~~~~-~~~~~~~~~~  245 (272)
                                +++++.|+.++||+|++|+||+++|++.......             +..    ..... ..+.....+|
T Consensus       149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (277)
T PRK05993        149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGP  228 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCH
Confidence                      6788999999999999999999999986432110             000    00101 1112224589


Q ss_pred             cchhhhhhhhhccC
Q 039897          246 IEVAPCYVFLACNH  259 (272)
Q Consensus       246 ~dva~~~~~L~s~~  259 (272)
                      +++|+.++..+...
T Consensus       229 ~~va~~i~~a~~~~  242 (277)
T PRK05993        229 EAVYAVLLHALTAP  242 (277)
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999988654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-28  Score=209.90  Aligned_cols=213  Identities=27%  Similarity=0.322  Sum_probs=166.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|++|||||+|+||+++++.|+++|++|++++|+....+.+.   +++...  ....++.++.+|+++++++++ +++
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~--~~~~~~~~~~~D~~d~~~~~~-~~~   74 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLL---SQATQL--NLQQNIKVQQLDVTDQNSIHN-FQL   74 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH---HHHHhc--CCCCceeEEecCCCCHHHHHH-HHH
Confidence            46789999999999999999999999999999999854433332   222221  123568889999999999999 999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|++|||||... ...+.+.+.+++++.+++|+.+++++++.++|.|++  .++||++||..+..+.+.    
T Consensus        75 ~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  153 (280)
T PRK06914         75 VLKEIGRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPY  153 (280)
T ss_pred             HHHhcCCeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchh
Confidence            9988999999999999854 356778899999999999999999999999999865  478999999866555332    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC------------HHHHHhhcc--CCCCCCCCCccchh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS------------EEESAQFGS--EVPMKRAGQPIEVA  249 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~------------~~~~~~~~~--~~~~~~~~~~~dva  249 (272)
                                +++++.++.++||++++++||+++|++......            .........  ..+..++.+++|+|
T Consensus       154 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  233 (280)
T PRK06914        154 VSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVA  233 (280)
T ss_pred             HHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHH
Confidence                      577788888899999999999999997542111            011111111  12345678999999


Q ss_pred             hhhhhhhccC
Q 039897          250 PCYVFLACNH  259 (272)
Q Consensus       250 ~~~~~L~s~~  259 (272)
                      +++++++++.
T Consensus       234 ~~~~~~~~~~  243 (280)
T PRK06914        234 NLIVEIAESK  243 (280)
T ss_pred             HHHHHHHcCC
Confidence            9999999876

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.96  E-value=8.9e-28  Score=202.87  Aligned_cols=226  Identities=41%  Similarity=0.610  Sum_probs=175.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCC-CCceEEeccCCC-hHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA-KDPMAISADLGF-DENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~  116 (272)
                      .+.+|++|||||++|||+++|+.|+++|++|+++.++.... ......+...    ... ..+.+..+|+++ .++++.+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~Dvs~~~~~v~~~   76 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE-AAEALAAAIK----EAGGGRAAAVAADVSDDEESVEAL   76 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh-hHHHHHHHHH----hcCCCcEEEEEecCCCCHHHHHHH
Confidence            57899999999999999999999999999999888875442 1111111111    122 367788899998 9999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----  192 (272)
                      ++.+.+.+|++|++|||||+.....++.+.+.++|++.+++|+.+++.+++.+.|+|+++ +||++||..+. ..+    
T Consensus        77 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~~~~~  154 (251)
T COG1028          77 VAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGPPGQA  154 (251)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCCCCcc
Confidence            999999999999999999996432478899999999999999999999999888988866 99999999764 211    


Q ss_pred             -h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHH--HHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          193 -E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE--SAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       193 -~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                       .          ++.++.|+.++||+||+|+||++.|++.........  ........+..+...|++++..+.++.+..
T Consensus       155 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (251)
T COG1028         155 AYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDE  234 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence             1          688889999999999999999999998754332210  111111115557888999999999887653


Q ss_pred             CCCcccceeecc
Q 039897          260 CSSYITGQVLHP  271 (272)
Q Consensus       260 ~~~~~tG~~i~i  271 (272)
                      ...+.+|+.+.+
T Consensus       235 ~~~~~~g~~~~~  246 (251)
T COG1028         235 AASYITGQTLPV  246 (251)
T ss_pred             hhccccCCEEEe
Confidence            256788877654

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.96  E-value=1.1e-28  Score=215.63  Aligned_cols=200  Identities=22%  Similarity=0.237  Sum_probs=153.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..|++++||||++|||+++|++|+++|++|++++|+.+.   +++..+++.+..  ...++..+.+|+++  ++.+.+++
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~---l~~~~~~l~~~~--~~~~~~~~~~Dl~~--~~~~~~~~  123 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDK---LKDVSDSIQSKY--SKTQIKTVVVDFSG--DIDEGVKR  123 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHH---HHHHHHHHHHHC--CCcEEEEEEEECCC--CcHHHHHH
Confidence            358999999999999999999999999999999998544   444444443311  13467788999985  33444555


Q ss_pred             HHHhcCC--ccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc--CCh
Q 039897          120 VVNAYGK--IDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW--HSP  192 (272)
Q Consensus       120 ~~~~~g~--ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~--~~~  192 (272)
                      +.+.+++  +|++|||||+... ..++.+.+.+++++++++|+.|++++++.++|.|++  .|+||++||.++..  +.+
T Consensus       124 l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p  203 (320)
T PLN02780        124 IKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDP  203 (320)
T ss_pred             HHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCc
Confidence            5555554  6699999998643 246788899999999999999999999999999954  58999999988753  223


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      .              +++++.|+.++||+|++|+||+|+|++.....         ..   ....+|+++|+.++..+..
T Consensus       204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~---------~~---~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR---------SS---FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC---------CC---CCCCCHHHHHHHHHHHhCC
Confidence            2              68999999999999999999999999863110         00   0134788999988887753

>PRK06194 hypothetical protein; Provisional

Probab=99.96  E-value=6.3e-28  Score=207.82  Aligned_cols=214  Identities=21%  Similarity=0.240  Sum_probs=165.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|+++.+++++++
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~   74 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA---LDRAVAELRA----QGAEVLGVRTDVSDAAQVEALA   74 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHH
Confidence            35778999999999999999999999999999999987433   3333333332    3456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--------CeEEEecCCCCcc
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--------SAIINTTSVEPLW  189 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--------g~iv~vsS~~~~~  189 (272)
                      +.+.+.++++|+||||||... ..++.+.+.++|+..+++|+.++++++++++|.|.+.        ++||++||.++..
T Consensus        75 ~~~~~~~g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  153 (287)
T PRK06194         75 DAALERFGAVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL  153 (287)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence            999999999999999999954 3677888999999999999999999999999998542        6899999988776


Q ss_pred             CChh--------------HHHHHHHHhh--CCeEEEEEecccccCCCCCCCCCH-HH-------------HHhhccCCCC
Q 039897          190 HSPE--------------ARGLALQLVE--RGIRVNGVAPGPIWTPLIPSSFSE-EE-------------SAQFGSEVPM  239 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~--~gi~vn~i~PG~v~t~~~~~~~~~-~~-------------~~~~~~~~~~  239 (272)
                      +.+.              +++++.++..  .+|+++.++||++.|++....... ..             ..........
T Consensus       154 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T PRK06194        154 APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVG  233 (287)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhh
Confidence            5433              5677777774  469999999999999986432110 00             0000001111


Q ss_pred             CCCCCccchhhhhhhhhccC
Q 039897          240 KRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~  259 (272)
                      ....+++|+|+.++.++...
T Consensus       234 ~~~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        234 SGKVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             ccCCCHHHHHHHHHHHHHcC
Confidence            12368999999999987544

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-27  Score=205.31  Aligned_cols=213  Identities=25%  Similarity=0.321  Sum_probs=165.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+..|+++||||+++||++++++|+++|++|++++|+...   +.+..+.+..    .+.++.++.+|+++++++.++++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~   79 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEK---CEELVDKIRA----DGGEAVAFPLDVTDPDSVKSFVA   79 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHH
Confidence            4667899999999999999999999999999999887433   3333333332    34567888999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++++++++++.|++  .++||++||..+..+.+.   
T Consensus        80 ~~~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~  158 (274)
T PRK07775         80 QAEEALGEIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGA  158 (274)
T ss_pred             HHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcch
Confidence            99998999999999999854 356677889999999999999999999999998854  478999999876654432   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHH---HHHhhc--cCCCCCCCCCccchhhhhhhhhc
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE---ESAQFG--SEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                 ++.++.++.+.||++++|+||+++|++........   ......  ......++.+++|+|++++++++
T Consensus       159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~  238 (274)
T PRK07775        159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAE  238 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhc
Confidence                       56677777778999999999999988643221111   111111  12234567899999999999997


Q ss_pred             cC
Q 039897          258 NH  259 (272)
Q Consensus       258 ~~  259 (272)
                      ..
T Consensus       239 ~~  240 (274)
T PRK07775        239 TP  240 (274)
T ss_pred             CC
Confidence            64

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.96  E-value=2.4e-28  Score=204.45  Aligned_cols=201  Identities=18%  Similarity=0.238  Sum_probs=159.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++++||||++|||++++++|+++|  +.|++.+|+....         .      ...++.++++|+++.++++++.   
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~------~~~~~~~~~~Dls~~~~~~~~~---   62 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------F------QHDNVQWHALDVTDEAEIKQLS---   62 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------c------ccCceEEEEecCCCHHHHHHHH---
Confidence            479999999999999999999985  5666665543210         0      2456788999999999888754   


Q ss_pred             HHhcCCccEEEEcccccCC-----CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccC---
Q 039897          121 VNAYGKIDILVNNAAVQYK-----AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWH---  190 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~---  190 (272)
                       +.++++|+||||||....     ...+.+.+.+.|+..+++|+.+++.+++.++|.|++.  ++|+++||..+...   
T Consensus        63 -~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~  141 (235)
T PRK09009         63 -EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNR  141 (235)
T ss_pred             -HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCC
Confidence             456899999999998642     2457788999999999999999999999999999763  68999987543211   


Q ss_pred             C-----hh---------HHHHHHHHhh--CCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          191 S-----PE---------ARGLALQLVE--RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       191 ~-----~~---------~~~la~e~~~--~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      .     ..         +++|+.|+.+  .+|+||+|+||+++|++....         ....+.++..+|+|+|+.+++
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~a~~~~~  212 (235)
T PRK09009        142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF---------QQNVPKGKLFTPEYVAQCLLG  212 (235)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch---------hhccccCCCCCHHHHHHHHHH
Confidence            1     11         6888989876  699999999999999986431         123455667899999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      ++++. ..+.+|+.+.+|
T Consensus       213 l~~~~-~~~~~g~~~~~~  229 (235)
T PRK09009        213 IIANA-TPAQSGSFLAYD  229 (235)
T ss_pred             HHHcC-ChhhCCcEEeeC
Confidence            99987 778999999775

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-28  Score=199.35  Aligned_cols=183  Identities=23%  Similarity=0.269  Sum_probs=154.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      ++|||||++|||.+++++|+++ ++|++++|+..                        .+++|+++++++++++++    
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------------~~~~D~~~~~~~~~~~~~----   52 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------------DVQVDITDPASIRALFEK----   52 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------------ceEecCCChHHHHHHHHh----
Confidence            7999999999999999999999 99999988621                        368999999999988875    


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  193 (272)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.+++++++.+.|+|+++++|+++||..+..+.+.          
T Consensus        53 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  131 (199)
T PRK07578         53 VGKVDAVVSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGA  131 (199)
T ss_pred             cCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHH
Confidence            478999999999853 467888899999999999999999999999999988899999999887655443          


Q ss_pred             ----HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceee
Q 039897          194 ----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL  269 (272)
Q Consensus       194 ----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i  269 (272)
                          +++++.|+ ++||+||+|+||++.|++...          ....+.....+++|+|+.+.++++.    ..+|++|
T Consensus       132 ~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~----------~~~~~~~~~~~~~~~a~~~~~~~~~----~~~g~~~  196 (199)
T PRK07578        132 LEGFVKAAALEL-PRGIRINVVSPTVLTESLEKY----------GPFFPGFEPVPAARVALAYVRSVEG----AQTGEVY  196 (199)
T ss_pred             HHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhh----------hhcCCCCCCCCHHHHHHHHHHHhcc----ceeeEEe
Confidence                68889999 889999999999999986311          1112334567899999999988853    5899998


Q ss_pred             cc
Q 039897          270 HP  271 (272)
Q Consensus       270 ~i  271 (272)
                      ++
T Consensus       197 ~~  198 (199)
T PRK07578        197 KV  198 (199)
T ss_pred             cc
Confidence            75

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.9e-28  Score=208.13  Aligned_cols=203  Identities=34%  Similarity=0.381  Sum_probs=165.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++++++||||+||||++++++|+++|++|++++|+.....               ...++.++++|++|+++++++++.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~---------------~~~~~~~~~~D~~d~~~~~~~~~~~   67 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA---------------PIPGVELLELDVTDDASVQAAVDEV   67 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------------ccCCCeeEEeecCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999743221               2335788999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+.++++|+||||||+.. ..++.+.+.+++++++++|+.+++++++.++|.|++  .++||++||..+..+.+.     
T Consensus        68 ~~~~g~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  146 (270)
T PRK06179         68 IARAGRIDVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYA  146 (270)
T ss_pred             HHhCCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHH
Confidence            999999999999999854 467788899999999999999999999999999965  479999999887665543     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-------HH-HHhh--ccCCCCCCCCCccchhhhhhh
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-------EE-SAQF--GSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-------~~-~~~~--~~~~~~~~~~~~~dva~~~~~  254 (272)
                               +++++.|+.++||++++|+||++.|++.......       .. ....  ....+..+..+|+++|..+++
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  226 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVK  226 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence                     5778888989999999999999999986432210       00 0000  001234456789999999999


Q ss_pred             hhccC
Q 039897          255 LACNH  259 (272)
Q Consensus       255 L~s~~  259 (272)
                      +++..
T Consensus       227 ~~~~~  231 (270)
T PRK06179        227 AALGP  231 (270)
T ss_pred             HHcCC
Confidence            98764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.3e-28  Score=204.95  Aligned_cols=203  Identities=25%  Similarity=0.311  Sum_probs=162.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||++|||++++++|+++|++|++++|+.+..+.+   ...+      .+.++.++++|+++.+++.++++.+.+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~------~~~~~~~~~~D~~~~~~v~~~~~~~~~   72 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAAL---AAEL------GAGNAWTGALDVTDRAAWDAALADFAA   72 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH---HHHh------cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999874432222   2221      245688999999999999999999877


Q ss_pred             h-cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh------
Q 039897          123 A-YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       123 ~-~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~------  193 (272)
                      . ++++|+||||||... ..++.+.+.++++.++++|+.+++++++++.++|++  .++||++||..+..+.+.      
T Consensus        73 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  151 (260)
T PRK08267         73 ATGGRLDVLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSA  151 (260)
T ss_pred             HcCCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHH
Confidence            6 789999999999854 367788899999999999999999999999999865  589999999877655433      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                              +++++.++.++||++++|.||++.|++..............   ......+++|++.+++.++..
T Consensus       152 sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~---~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        152 TKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTK---RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHh---hccCCCCHHHHHHHHHHHHhC
Confidence                    57888888889999999999999999865411111111111   122346789999999999854

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.96  E-value=1.4e-27  Score=201.94  Aligned_cols=222  Identities=32%  Similarity=0.450  Sum_probs=174.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++||||++|+||++++++|+++|++|++++|+....+.+.   +++..    .+.++.++.+|+++.+++.++++.+.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAA---KVATD----AGGSVIYLVADVTKEDEIADMIAAAA   73 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHh----cCCceEEEECCCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999854433333   33322    34568889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~------  193 (272)
                      +.++++|+||||+|.... .+..+.+.+++++++++|+.+++.+++.+++.|++  .+++|++||..+..+.+.      
T Consensus        74 ~~~~~~d~vi~~a~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~  152 (255)
T TIGR01963        74 AEFGGLDILVNNAGIQHV-APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVA  152 (255)
T ss_pred             HhcCCCCEEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHH
Confidence            988999999999998543 45667788999999999999999999999998865  368999999765554432      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH----------HH-HHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE----------EE-SAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                              +++++.++.+.+|+++.++||.+.|++.......          .. ...+....+...+.+++|+|+++++
T Consensus       153 sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  232 (255)
T TIGR01963       153 AKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALF  232 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHH
Confidence                    4667777777899999999999998864221110          00 1112223355567899999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      ++++. ....+|+.+++|
T Consensus       233 ~~~~~-~~~~~g~~~~~~  249 (255)
T TIGR01963       233 LASDA-AAGITGQAIVLD  249 (255)
T ss_pred             HcCcc-ccCccceEEEEc
Confidence            99875 567899999886

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-27  Score=203.39  Aligned_cols=210  Identities=26%  Similarity=0.399  Sum_probs=166.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ++++|||||+|+||++++++|+++|++|++++|+....   .+..+++..    .+.++.++.+|++++++++++++++.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~---~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   73 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL---ASLAQELAD----HGGEALVVPTDVSDAEACERLIEAAV   73 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999874433   333333332    34578889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccC-CHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEI-DEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~------  193 (272)
                      +.++++|+||||+|... ..++.+. +.+++++.+++|+.+++++++.+.+.|++ .++||++||..+..+.+.      
T Consensus        74 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  152 (263)
T PRK06181         74 ARFGGIDILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAA  152 (263)
T ss_pred             HHcCCCCEEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHH
Confidence            99999999999999854 3566777 89999999999999999999999998854 589999999876655433      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                              ++.++.++.+++|+++++.||++.|++....................++.+|+|+|+.++++++..
T Consensus       153 sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        153 SKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCC
Confidence                    567788888899999999999999998654322111111111112236789999999999999754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=2.3e-27  Score=198.60  Aligned_cols=219  Identities=40%  Similarity=0.549  Sum_probs=177.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      +||||++++||..++++|+++|++|++++|+..  ..+......+..    .+.++.++.+|++++++++++++.+.+.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE--EGAEEVVEELKA----YGVKALGVVCDVSDREDVKAVVEEIEEEL   74 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCch--hHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999988742  222222223322    35568889999999999999999999999


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---------
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---------  193 (272)
                      +++|+|||++|... ..++.+.+.+++++.+++|+.+++++++.+.+.+.+  .++++++||.++..+.+.         
T Consensus        75 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~  153 (239)
T TIGR01830        75 GPIDILVNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKA  153 (239)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHH
Confidence            99999999999854 345677788999999999999999999999998844  479999999876655433         


Q ss_pred             -----HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccccee
Q 039897          194 -----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV  268 (272)
Q Consensus       194 -----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~  268 (272)
                           ++.++.++...|++++.++||++.|++... ........+....+..++.+++|+++.+++++.+. ..+.+|++
T Consensus       154 a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~g~~  231 (239)
T TIGR01830       154 GVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-LSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDE-ASYITGQV  231 (239)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-cChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcc-cCCcCCCE
Confidence                 567788888889999999999999887543 33333334455667778889999999999999776 77899999


Q ss_pred             eccC
Q 039897          269 LHPN  272 (272)
Q Consensus       269 i~id  272 (272)
                      +++|
T Consensus       232 ~~~~  235 (239)
T TIGR01830       232 IHVD  235 (239)
T ss_pred             EEeC
Confidence            9886

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=205.12  Aligned_cols=203  Identities=26%  Similarity=0.347  Sum_probs=159.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||++|||++++++|+++|++|++++|+....+.       +.      ..++.++.+|++++++++++++.+.+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-------~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~   68 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-------LA------AAGFTAVQLDVNDGAALARLAEELEA   68 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-------HH------HCCCeEEEeeCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999987433211       11      12367889999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecCCCCccCChh--------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS~~~~~~~~~--------  193 (272)
                      .++++|+||||||... ..++.+.+.++++..+++|+.+++.++++++|.|+++ ++||++||..+..+.+.        
T Consensus        69 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  147 (274)
T PRK05693         69 EHGGLDVLINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASK  147 (274)
T ss_pred             hcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHH
Confidence            9999999999999854 4677888999999999999999999999999998664 89999999887655443        


Q ss_pred             ------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHH------------HHhh--ccCCCCCCCCCccchhhhhh
Q 039897          194 ------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE------------SAQF--GSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 ------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~dva~~~~  253 (272)
                            +++++.|+.++||+|++|+||+|+|++.........            .+..  ..........+|+++|+.++
T Consensus       148 ~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~  227 (274)
T PRK05693        148 AAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLL  227 (274)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence                  577888988999999999999999998643211000            0000  00011123457899999998


Q ss_pred             hhhccC
Q 039897          254 FLACNH  259 (272)
Q Consensus       254 ~L~s~~  259 (272)
                      ..+...
T Consensus       228 ~~~~~~  233 (274)
T PRK05693        228 AAVQQS  233 (274)
T ss_pred             HHHhCC
Confidence            887643

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.4e-28  Score=209.83  Aligned_cols=223  Identities=25%  Similarity=0.275  Sum_probs=161.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++|++|||||++|||++++++|+++|++|++++|+....   .+..+++...  ..+.++.++.+|+++.++++++
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~---~~~~~~l~~~--~~~~~~~~~~~Dl~d~~~v~~~   85 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKG---KAAAARITAA--TPGADVTLQELDLTSLASVRAA   85 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHHh--CCCCceEEEECCCCCHHHHHHH
Confidence            3568999999999999999999999999999999999974433   3333333321  1245678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc-C---
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW-H---  190 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~-~---  190 (272)
                      ++++.+.++++|+||||||+...   ....+.++++..+++|+.+++.+++.+++.|++  .++||++||..+.. +   
T Consensus        86 ~~~~~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~  162 (306)
T PRK06197         86 ADALRAAYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIH  162 (306)
T ss_pred             HHHHHhhCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCC
Confidence            99999999999999999998532   234667889999999999999999999999975  47999999975432 0   


Q ss_pred             ---------Ch----h----------HHHHHHHHhhCCeEEEEE--ecccccCCCCCCCCCHHHHHhhccCCCCCCCCCc
Q 039897          191 ---------SP----E----------ARGLALQLVERGIRVNGV--APGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQP  245 (272)
Q Consensus       191 ---------~~----~----------~~~la~e~~~~gi~vn~i--~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (272)
                               .+    .          ++.++.+++++|++|+++  +||+|.|++.... +......+....+. ...++
T Consensus       163 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~-~~~~~~~~~~~~~~-~~~~~  240 (306)
T PRK06197        163 FDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL-PRALRPVATVLAPL-LAQSP  240 (306)
T ss_pred             ccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC-cHHHHHHHHHHHhh-hcCCH
Confidence                     11    1          678888898888877765  6999999987543 22211111111111 12345


Q ss_pred             cchhhhhhhhhccCCCCcccceeecc
Q 039897          246 IEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       246 ~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ++-+..+++++..  ....+|..+..
T Consensus       241 ~~g~~~~~~~~~~--~~~~~g~~~~~  264 (306)
T PRK06197        241 EMGALPTLRAATD--PAVRGGQYYGP  264 (306)
T ss_pred             HHHHHHHHHHhcC--CCcCCCeEEcc
Confidence            5555555555543  34567777653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.96  E-value=2.3e-27  Score=207.76  Aligned_cols=224  Identities=20%  Similarity=0.163  Sum_probs=161.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+...   +.+..+++..    ...++.++.+|+++.+++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~~   74 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK---AEAAAQELGI----PPDSYTIIHIDLGDLDSVRRFV   74 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHhhc----cCCceEEEEecCCCHHHHHHHH
Confidence            45679999999999999999999999999999999987433   3333333321    3456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC----CeEEEecCCCCccC---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG----SAIINTTSVEPLWH---  190 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----g~iv~vsS~~~~~~---  190 (272)
                      +++.+.++++|+||||||+..........+.++|+..+++|+.|++++++.++|.|++.    ++||++||......   
T Consensus        75 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~  154 (322)
T PRK07453         75 DDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELG  154 (322)
T ss_pred             HHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccC
Confidence            99887778899999999985432334567889999999999999999999999999653    59999999643210   


Q ss_pred             ---------------------------------Ch---h----------HHHHHHHHh-hCCeEEEEEecccc-cCCCCC
Q 039897          191 ---------------------------------SP---E----------ARGLALQLV-ERGIRVNGVAPGPI-WTPLIP  222 (272)
Q Consensus       191 ---------------------------------~~---~----------~~~la~e~~-~~gi~vn~i~PG~v-~t~~~~  222 (272)
                                                       .+   .          ++.+++++. .+||+||+++||.| .|++..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~  234 (322)
T PRK07453        155 GKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFR  234 (322)
T ss_pred             CccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccc
Confidence                                             00   1          466777774 36899999999999 588754


Q ss_pred             CCCCHH--HHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeec
Q 039897          223 SSFSEE--ESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH  270 (272)
Q Consensus       223 ~~~~~~--~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~  270 (272)
                      ......  ....+. ........+++.-+..+++++.+. ....+|..+.
T Consensus       235 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~y~~  282 (322)
T PRK07453        235 NTPPLFQKLFPWFQ-KNITGGYVSQELAGERVAQVVADP-EFAQSGVHWS  282 (322)
T ss_pred             cCCHHHHHHHHHHH-HHHhhceecHHHHhhHHHHhhcCc-ccCCCCceee
Confidence            322110  001111 111122345666777777777655 3345776553

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.96  E-value=1.4e-27  Score=199.77  Aligned_cols=176  Identities=24%  Similarity=0.273  Sum_probs=157.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+.+|.|+|||..+|+|..+|++|.++|++|++...+.+..+.++...         ..++...+++|+|++++++++.
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~---------~s~rl~t~~LDVT~~esi~~a~   95 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGET---------KSPRLRTLQLDVTKPESVKEAA   95 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhh---------cCCcceeEeeccCCHHHHHHHH
Confidence            5578999999999999999999999999999999998766655555443         2678889999999999999999


Q ss_pred             HHHHHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-  193 (272)
                      +.+.+..+  ++..||||||+....++.+-.+.+++++++++|++|++.++++|+|++++ +||||++||+.+..+.|. 
T Consensus        96 ~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~  175 (322)
T KOG1610|consen   96 QWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPAL  175 (322)
T ss_pred             HHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCccc
Confidence            99998653  69999999998877788899999999999999999999999999999977 799999999988777654 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIP  222 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~  222 (272)
                                   +.+++.|+.+.||+|..|.||...|++..
T Consensus       176 g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  176 GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence                         67889999999999999999999999875

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=5e-27  Score=196.69  Aligned_cols=215  Identities=26%  Similarity=0.401  Sum_probs=169.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|+++||||+++||.++++.|+++|++|++++|+....   ......+.+     ..++.++++|+++++++.++++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~   73 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL---KRMKKTLSK-----YGNIHYVVGDVSSTESARNVIE   73 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHh-----cCCeEEEECCCCCHHHHHHHHH
Confidence            47899999999999999999999999999999999974433   222222221     2357889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc-CChh----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW-HSPE----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~-~~~~----  193 (272)
                      ++...++++|.+|+++|.... .++.  +.++++.++++|+.+++.+.+.++|.|++++++|++||..+.. +.+.    
T Consensus        74 ~~~~~~~~id~ii~~ag~~~~-~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y  150 (238)
T PRK05786         74 KAAKVLNAIDGLVVTVGGYVE-DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSY  150 (238)
T ss_pred             HHHHHhCCCCEEEEcCCCcCC-CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHH
Confidence            998888999999999997432 3333  3488999999999999999999999998889999999986532 2211    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC-CCCCCccchhhhhhhhhccCCCC
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                ++.++.++..+||++++|+||++.|++...    ......   .+. ....+++|+++.+.+++++. ..
T Consensus       151 ~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~----~~~~~~---~~~~~~~~~~~~va~~~~~~~~~~-~~  222 (238)
T PRK05786        151 AVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE----RNWKKL---RKLGDDMAPPEDFAKVIIWLLTDE-AD  222 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch----hhhhhh---ccccCCCCCHHHHHHHHHHHhccc-cc
Confidence                      567788888889999999999999987422    111111   111 23568899999999999876 77


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      .++|+.+.+|
T Consensus       223 ~~~g~~~~~~  232 (238)
T PRK05786        223 WVDGVVIPVD  232 (238)
T ss_pred             CccCCEEEEC
Confidence            8999998876

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.9e-27  Score=197.50  Aligned_cols=200  Identities=17%  Similarity=0.188  Sum_probs=161.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||++|||++++++|+++|++|++++|+..+.+.+   ...+...  ..+.++.++++|+++++++.++++++.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~---~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEEL---KAELLAR--YPGIKVAVAALDVNDHDQVFEVFAEFR   76 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHHHHhh--CCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999985443333   3333221  125578889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~------  193 (272)
                      +.++++|++|||||+.. ..++.+.+.+.+++.+++|+.+++++++.+.++|++  .++||++||..+..+.+.      
T Consensus        77 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~  155 (248)
T PRK08251         77 DELGGLDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYA  155 (248)
T ss_pred             HHcCCCCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHH
Confidence            99999999999999854 356777888999999999999999999999999865  478999999876544331      


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                               ++.++.++...||+|++|+||+++|++......            .....+++|.++.++..+...
T Consensus       156 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        156 ASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc------------CCccCCHHHHHHHHHHHHhcC
Confidence                     467778888889999999999999998643210            123457899999988877654

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.5e-27  Score=198.63  Aligned_cols=200  Identities=20%  Similarity=0.177  Sum_probs=155.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++|++|||||++|||+++|++|+++| ++|++++|+...  .+.+..+++...   ...++.++++|+++++++.+++++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~--~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~   81 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP--RRDAAVAQMKAA---GASSVEVIDFDALDTDSHPKVIDA   81 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch--hHHHHHHHHHhc---CCCceEEEEecCCChHHHHHHHHH
Confidence            46899999999999999999999995 999999998543  123333333321   233688999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+ ++++|++|||+|........ ..+.+++.+++++|+.+++++++.++|.|++  .++||++||..+..+.+.    
T Consensus        82 ~~~-~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y  159 (253)
T PRK07904         82 AFA-GGDVDVAIVAFGLLGDAEEL-WQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVY  159 (253)
T ss_pred             HHh-cCCCCEEEEeeecCCchhhc-ccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcch
Confidence            886 58999999999985432111 1245566788999999999999999999975  489999999876543322    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                +++++.|+.++||+|++|+||+++|++.....         .   .....+++|+|+.++..+...
T Consensus       160 ~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~---------~---~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        160 GSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK---------E---APLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC---------C---CCCCCCHHHHHHHHHHHHHcC
Confidence                      57889999999999999999999999864321         0   012358999999999998764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=2.7e-27  Score=185.90  Aligned_cols=171  Identities=25%  Similarity=0.289  Sum_probs=144.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +.+.|.+||||||++|||+++|++|.+.|-+|++++|+.+.   +.+...        ....+....||+.|.+++.+++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~---L~e~~~--------~~p~~~t~v~Dv~d~~~~~~lv   69 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEER---LAEAKA--------ENPEIHTEVCDVADRDSRRELV   69 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHH---HHHHHh--------cCcchheeeecccchhhHHHHH
Confidence            35789999999999999999999999999999999998443   333322        3556788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCc-ccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSV-EEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +.+++.|+.+++||||||+.....-. .+...++.++.+.+|+.++..|+..|+|.+.+  .+.||+|||.-++.+... 
T Consensus        70 ewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~  149 (245)
T COG3967          70 EWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAST  149 (245)
T ss_pred             HHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccc
Confidence            99999999999999999997543222 34456777889999999999999999999865  488999999877766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTP  219 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~  219 (272)
                                   +.+|+.++...+|+|..+.|-.|+|+
T Consensus       150 PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                         57888888888999999999999996

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.8e-26  Score=193.21  Aligned_cols=208  Identities=30%  Similarity=0.413  Sum_probs=166.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+.+++++||||+|+||.+++++|+++|++|++++|++...   .+..+++.+     ..++.++.+|+++.+++.++++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~---~~~~~~l~~-----~~~~~~~~~D~~~~~~~~~~~~   74 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKEL---EEAAAELNN-----KGNVLGLAADVRDEADVQRAVD   74 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHH---HHHHHHHhc-----cCcEEEEEccCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999975433   333333332     2568889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~----  193 (272)
                      .+.+.++++|+|||++|... ..++.+.+.+++.+.+++|+.+++++++++++.|++ .++||++||..+..+...    
T Consensus        75 ~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y  153 (237)
T PRK07326         75 AIVAAFGGLDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAY  153 (237)
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchH
Confidence            99999999999999999854 357778899999999999999999999999998843 578999999876544322    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                ++.++.++...|+++++|+||++.|++...... +.         .....+++|+++.++++++.+ ...
T Consensus       154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-~~---------~~~~~~~~d~a~~~~~~l~~~-~~~  222 (237)
T PRK07326        154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS-EK---------DAWKIQPEDIAQLVLDLLKMP-PRT  222 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc-hh---------hhccCCHHHHHHHHHHHHhCC-ccc
Confidence                      467778888889999999999999987643211 10         011257899999999999876 444


Q ss_pred             ccc
Q 039897          264 ITG  266 (272)
Q Consensus       264 ~tG  266 (272)
                      +.+
T Consensus       223 ~~~  225 (237)
T PRK07326        223 LPS  225 (237)
T ss_pred             ccc
Confidence            433

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.95  E-value=1.3e-26  Score=184.90  Aligned_cols=209  Identities=21%  Similarity=0.238  Sum_probs=158.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .-|.++||||.+|||..++++|.+. |-.+++..++..+.  ...   ++..... ...+++.+++|+++++++++++++
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~--a~~---~l~~k~~-~d~rvHii~Ldvt~deS~~~~~~~   75 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEK--AAT---ELALKSK-SDSRVHIIQLDVTCDESIDNFVQE   75 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHH--hhH---HHHHhhc-cCCceEEEEEecccHHHHHHHHHH
Confidence            3466999999999999999999966 55666665542222  122   2221111 478899999999999999999999


Q ss_pred             HHHh--cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-------------CeEEEecC
Q 039897          120 VVNA--YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-------------SAIINTTS  184 (272)
Q Consensus       120 ~~~~--~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-------------g~iv~vsS  184 (272)
                      +.+-  ..+++++|||||+...+......+.+.|.+.+++|..|+..++|+|+|++++.             +.|||+||
T Consensus        76 V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS  155 (249)
T KOG1611|consen   76 VEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISS  155 (249)
T ss_pred             HHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeec
Confidence            9997  45899999999998777777888899999999999999999999999999762             36999998


Q ss_pred             CCCccCChh-----------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccc
Q 039897          185 VEPLWHSPE-----------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIE  247 (272)
Q Consensus       185 ~~~~~~~~~-----------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  247 (272)
                      ..+..+...                 +|+++.|+.+.+|-|..+|||+|.|+|-...                ...++||
T Consensus       156 ~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~----------------a~ltvee  219 (249)
T KOG1611|consen  156 SAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK----------------AALTVEE  219 (249)
T ss_pred             cccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC----------------cccchhh
Confidence            765533211                 7999999999999999999999999996421                1234555


Q ss_pred             hhhhhhhhhccCCCCcccceeeccC
Q 039897          248 VAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       248 va~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      -+..++.....- ...-+|-.++.|
T Consensus       220 Sts~l~~~i~kL-~~~hnG~ffn~d  243 (249)
T KOG1611|consen  220 STSKLLASINKL-KNEHNGGFFNRD  243 (249)
T ss_pred             hHHHHHHHHHhc-CcccCcceEccC
Confidence            555554444433 445566666654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-26  Score=219.41  Aligned_cols=205  Identities=27%  Similarity=0.321  Sum_probs=165.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|+++.++++++
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~  438 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEA---LDELVAEIRA----KGGTAHAYTCDLTDSAAVDHT  438 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHh----cCCcEEEEEecCCCHHHHHHH
Confidence            457899999999999999999999999999999999998443   3333344432    355788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCccc--CCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEE--IDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~--~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~  192 (272)
                      ++++.+.++++|++|||||.... ..+.+  .+.+++++++++|+.+++++++.++|.|++  .++||++||.++..+.+
T Consensus       439 ~~~~~~~~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  517 (657)
T PRK07201        439 VKDILAEHGHVDYLVNNAGRSIR-RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP  517 (657)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC-CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC
Confidence            99999999999999999998532 23322  236889999999999999999999999965  47999999988765544


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      .              +++++.|+.++||+||+|+||+|+|++.....      .+    ......+|+++|+.++..+..
T Consensus       518 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~------~~----~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        518 RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK------RY----NNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc------cc----cCCCCCCHHHHHHHHHHHHHh
Confidence            3              67899999999999999999999999864321      01    112346899999999887654


Q ss_pred             C
Q 039897          259 H  259 (272)
Q Consensus       259 ~  259 (272)
                      .
T Consensus       588 ~  588 (657)
T PRK07201        588 K  588 (657)
T ss_pred             C
Confidence            3

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.6e-26  Score=192.88  Aligned_cols=191  Identities=22%  Similarity=0.224  Sum_probs=152.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++++||||++|||++++++|+++|++|++++|+.+.   +.+    +.+    ...++.++.+|++++++++++++++. 
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~---~~~----~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~-   69 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV---LDE----LHT----QSANIFTLAFDVTDHPGTKAALSQLP-   69 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH---HHH----HHH----hcCCCeEEEeeCCCHHHHHHHHHhcc-
Confidence            689999999999999999999999999999997432   221    211    23467889999999999999988764 


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                        ..+|.+|||||... .......+.++|++++++|+.+++++++++.|.|+++++||++||..+..+.+.         
T Consensus        70 --~~~d~~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~  146 (240)
T PRK06101         70 --FIPELWIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKA  146 (240)
T ss_pred             --cCCCEEEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHH
Confidence              25899999998642 234456788999999999999999999999999988889999999876665443         


Q ss_pred             -----HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                           ++.++.|+.++||+++++.||++.|++.....           .......++++++..++..+...
T Consensus       147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-----------~~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT-----------FAMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC-----------CCCCcccCHHHHHHHHHHHHhcC
Confidence                 67888888999999999999999999864311           01122357899999988877654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.8e-26  Score=194.17  Aligned_cols=206  Identities=23%  Similarity=0.327  Sum_probs=159.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .|++|||||+|+||++++++|+++|++|++++|+.+..+.+   ...       ...++.++.+|+++.+++.++++++.
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~---~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~   71 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDL---KAR-------YGDRLWVLQLDVTDSAAVRAVVDRAF   71 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHh-------ccCceEEEEccCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999874332221   111       23467889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~------  193 (272)
                      +.++++|+||||||... ..+..+.+.+++++.+++|+.++++++++++|+|++  .++||++||..+..+.+.      
T Consensus        72 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  150 (276)
T PRK06482         72 AALGRIDVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHA  150 (276)
T ss_pred             HHcCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHH
Confidence            98999999999999865 356777889999999999999999999999999865  478999999876554432      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--------H----HHHHhhccCCCCCCCCCccchhhhhh
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--------E----EESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                              +++++.++.++||+++.++||.+.|++......        .    ........ -+..-..+++|++++++
T Consensus       151 sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~a~~  229 (276)
T PRK06482        151 TKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFAIPGDPQKMVQAMI  229 (276)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccCCCCCCHHHHHHHHH
Confidence                    467777887889999999999998887432110        1    11111111 11222468999999999


Q ss_pred             hhhccC
Q 039897          254 FLACNH  259 (272)
Q Consensus       254 ~L~s~~  259 (272)
                      ..+...
T Consensus       230 ~~~~~~  235 (276)
T PRK06482        230 ASADQT  235 (276)
T ss_pred             HHHcCC
Confidence            988643

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.1e-26  Score=191.91  Aligned_cols=196  Identities=23%  Similarity=0.216  Sum_probs=159.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+++||||++|||.+++++|+++|++|++++|+.+..+   +..+++..   ....++.++++|++++++++++++++.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~---~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLE---RLADDLRA---RGAVAVSTHELDILDTASHAAFLDSLPA   75 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHH---HHHHHHHH---hcCCeEEEEecCCCChHHHHHHHHHHhh
Confidence            68999999999999999999999999999999854433   33333322   1355788999999999999999988754


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-------  193 (272)
                         .+|++|||+|.... .++.+.+.+++.+.+++|+.+++++++++.|+|++  .++|+++||..+..+.+.       
T Consensus        76 ---~~d~vv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  151 (243)
T PRK07102         76 ---LPDIVLIAVGTLGD-QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSA  151 (243)
T ss_pred             ---cCCEEEECCcCCCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHH
Confidence               47999999998543 56778899999999999999999999999999865  478999999876555433       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                             +++++.|+.+.||+|++|+||+++|++....           ..+.....+++|+++.++.+++..
T Consensus       152 K~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-----------~~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        152 KAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-----------KLPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-----------CCCccccCCHHHHHHHHHHHHhCC
Confidence                   5778888999999999999999999875321           112334568999999999998865

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.3e-27  Score=195.84  Aligned_cols=204  Identities=19%  Similarity=0.228  Sum_probs=157.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH-HH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE-VV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~  121 (272)
                      +++|||||+||||++++++|+++|++|++++|+....  +      ..    ..+.++.++++|+++.+++++++++ +.
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~------~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~   69 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L------AA----AAGERLAEVELDLSDAAAAAAWLAGDLL   69 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h------hh----ccCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence            3799999999999999999999999999999874321  1      01    1345688899999999999998877 55


Q ss_pred             Hhc---CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          122 NAY---GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       122 ~~~---g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      +.+   +++|++|||+|......++.+.+.++|++.+++|+.+++.+++.+.+.|++  .++||++||..+..+.+.   
T Consensus        70 ~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  149 (243)
T PRK07023         70 AAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSV  149 (243)
T ss_pred             HHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchH
Confidence            544   479999999998655567778899999999999999999999999999865  479999999877665443   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCC--CC---HHHHHhhccCCCCCCCCCccchhh-hhhhhh
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS--FS---EEESAQFGSEVPMKRAGQPIEVAP-CYVFLA  256 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~dva~-~~~~L~  256 (272)
                                 ++.++.+ .+.||+++.|+||+++|++....  ..   ......+....+.++..+|+|+|. .+.+|+
T Consensus       150 Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~  228 (243)
T PRK07023        150 YCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLL  228 (243)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHh
Confidence                       4555666 56799999999999999874211  00   011222344556778889999999 456676


Q ss_pred             ccC
Q 039897          257 CNH  259 (272)
Q Consensus       257 s~~  259 (272)
                      ++.
T Consensus       229 ~~~  231 (243)
T PRK07023        229 SDD  231 (243)
T ss_pred             ccc
Confidence            654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.6e-25  Score=184.18  Aligned_cols=166  Identities=19%  Similarity=0.235  Sum_probs=138.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+++|||+++|||.+++++|+++|++|++++|+..+.+.+.            ...++.++.+|++++++++++++.+.+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~------------~~~~~~~~~~D~~d~~~~~~~~~~~~~   69 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ------------ALPGVHIEKLDMNDPASLDQLLQRLQG   69 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH------------hccccceEEcCCCCHHHHHHHHHHhhc
Confidence            68999999999999999999999999999999865432221            123567789999999999999988754


Q ss_pred             hcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecCCCCccCCh--------
Q 039897          123 AYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTSVEPLWHSP--------  192 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS~~~~~~~~--------  192 (272)
                        +++|+||||||.... ..++.+.+.+++...+++|+.+++.++++++++|+++ +.+++++|..+..+.+        
T Consensus        70 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y  147 (225)
T PRK08177         70 --QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLY  147 (225)
T ss_pred             --CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccch
Confidence              579999999998533 2456778899999999999999999999999999765 8899999876543221        


Q ss_pred             h---------HHHHHHHHhhCCeEEEEEecccccCCCCC
Q 039897          193 E---------ARGLALQLVERGIRVNGVAPGPIWTPLIP  222 (272)
Q Consensus       193 ~---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~  222 (272)
                      .         ++.++.|+.++||+||+|+||+++|++..
T Consensus       148 ~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        148 KASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence            1         68889999999999999999999999853

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=3e-26  Score=180.86  Aligned_cols=170  Identities=27%  Similarity=0.300  Sum_probs=146.9

Q ss_pred             CCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGD-SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas-~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .-|+|||||++ ||||.+++++|++.|+.|+.+.|+.+.-..+.            ...++...++|+++++++..+..+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~------------~~~gl~~~kLDV~~~~~V~~v~~e   73 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA------------IQFGLKPYKLDVSKPEEVVTVSGE   73 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH------------HhhCCeeEEeccCChHHHHHHHHH
Confidence            45789999865 79999999999999999999999855433332            133478899999999999999999


Q ss_pred             HHH-hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc-ccCCeEEEecCCCCccCChh----
Q 039897          120 VVN-AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM-NEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~-~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +++ .+|++|+|+||||... ..|..+.+.+++++.|++|++|.+..++++...+ +++|.|||++|..++.+.|.    
T Consensus        74 vr~~~~Gkld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iY  152 (289)
T KOG1209|consen   74 VRANPDGKLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIY  152 (289)
T ss_pred             HhhCCCCceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhh
Confidence            999 7899999999999965 4788899999999999999999999999998655 55899999999988776654    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCC
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPS  223 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~  223 (272)
                                ++.|..|+++.||+|..+.||.|.|++..+
T Consensus       153 sAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  153 SASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             hHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                      577888899999999999999999998755

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.93  E-value=7.9e-26  Score=190.16  Aligned_cols=184  Identities=30%  Similarity=0.306  Sum_probs=146.1

Q ss_pred             HHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEccccc
Q 039897           58 VAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus        58 ia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +|++|+++|++|++++|+.....        +          ..++++|+++.++++++++++.   +++|+||||||+.
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~--------~----------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~   59 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT--------L----------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVP   59 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh--------h----------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCC
Confidence            47899999999999999754321        0          1357899999999999998774   6899999999974


Q ss_pred             CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc---------------------------C
Q 039897          138 YKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW---------------------------H  190 (272)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~---------------------------~  190 (272)
                      ..         ++++.++++|+.+++++++.++|+|+++|+||++||.++..                           +
T Consensus        60 ~~---------~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (241)
T PRK12428         60 GT---------APVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHP  130 (241)
T ss_pred             CC---------CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccC
Confidence            21         24789999999999999999999998789999999987652                           1


Q ss_pred             Chh--------------HHHHH-HHHhhCCeEEEEEecccccCCCCCCCCCHHHHH-hhccCCCCCCCCCccchhhhhhh
Q 039897          191 SPE--------------ARGLA-LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA-QFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       191 ~~~--------------~~~la-~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      .+.              ++.++ .|+.++||+||+|+||++.|+|........... ......|++++.+|+|+|+.++|
T Consensus       131 ~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~  210 (241)
T PRK12428        131 VALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVF  210 (241)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHH
Confidence            111              57788 889889999999999999999875432111111 11234577888999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.+++|+++.+|
T Consensus       211 l~s~~-~~~~~G~~i~vd  227 (241)
T PRK12428        211 LCSDA-ARWINGVNLPVD  227 (241)
T ss_pred             HcChh-hcCccCcEEEec
Confidence            99887 889999999886

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.93  E-value=1.9e-25  Score=186.86  Aligned_cols=176  Identities=26%  Similarity=0.321  Sum_probs=146.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH-HHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN-CKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~  118 (272)
                      -.|+|++||||+.|||++.|++|+++|.+|++++|++++++.+++.+++-      .+.++.++.+|+++.+. .+.+.+
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~------~~vev~~i~~Dft~~~~~ye~i~~  120 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEK------YKVEVRIIAIDFTKGDEVYEKLLE  120 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHH------hCcEEEEEEEecCCCchhHHHHHH
Confidence            34599999999999999999999999999999999966655555544432      35778999999999886 222332


Q ss_pred             HHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          119 EVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      .+. . ..+.+||||+|.... ...+.+.+.+.+++.+.+|..+...+++.++|.|.+  .|-|+++||.++..+.|.  
T Consensus       121 ~l~-~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s  198 (312)
T KOG1014|consen  121 KLA-G-LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLS  198 (312)
T ss_pred             Hhc-C-CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHH
Confidence            222 1 257899999998652 456888888899999999999999999999999955  689999999999999887  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS  223 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~  223 (272)
                                  +++|..|+..+||.|-++.|..|-|.|...
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence                        689999999999999999999999999744

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.93  E-value=5.9e-25  Score=174.24  Aligned_cols=143  Identities=37%  Similarity=0.616  Sum_probs=126.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      |++|||||++|||++++++|+++|+ +|++++|+ .+.+...+..+++..    .+.++.++++|++++++++++++++.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-~~~~~~~~l~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRS-EDSEGAQELIQELKA----PGAKITFIECDLSDPESIRALIEEVI   75 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-CHHHHHHHHHHHHHH----TTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-ccccccccccccccc----cccccccccccccccccccccccccc
Confidence            7999999999999999999999966 67777776 334555555555554    56889999999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~  193 (272)
                      +.++.+|++|||+|... ..++.+.+.++|++++++|+.+++++.+.+.|  ++.++||++||.++..+.+.
T Consensus        76 ~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~  144 (167)
T PF00106_consen   76 KRFGPLDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSPG  144 (167)
T ss_dssp             HHHSSESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTT
T ss_pred             ccccccccccccccccc-ccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCCC
Confidence            99999999999999976 67899999999999999999999999999999  66899999999999988776

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08264 short chain dehydrogenase; Validated

Probab=99.93  E-value=2.4e-24  Score=180.43  Aligned_cols=190  Identities=28%  Similarity=0.337  Sum_probs=152.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +++.++++|||||+|+||++++++|+++|+ +|++++|+.+..   .+           .+.++.++.+|+++.+++.++
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~---~~-----------~~~~~~~~~~D~~~~~~~~~~   67 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV---TD-----------LGPRVVPLQLDVTDPASVAAA   67 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh---hh-----------cCCceEEEEecCCCHHHHHHH
Confidence            457899999999999999999999999999 999999874332   11           234678899999999998887


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++.    ++.+|+|||++|......++.+.+.+++.+.+++|+.+++.+++++.+.|++  .++++++||..+..+.+. 
T Consensus        68 ~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~  143 (238)
T PRK08264         68 AEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNL  143 (238)
T ss_pred             HHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCc
Confidence            764    4689999999998544567888899999999999999999999999998864  478999999876554332 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   ++.++.++.+.||+++++.||.++|++.....              ....++++++..++..+...
T Consensus       144 ~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~--------------~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        144 GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD--------------APKASPADVARQILDALEAG  208 (238)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC--------------cCCCCHHHHHHHHHHHHhCC
Confidence                         56778888888999999999999998753211              11345677777777666543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.6e-24  Score=181.23  Aligned_cols=182  Identities=18%  Similarity=0.170  Sum_probs=135.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..|++|++|||||++|||++++++|+++|++|++++|+...  ...    ...     .. ...++.+|+++.+++.+  
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~--~~~----~~~-----~~-~~~~~~~D~~~~~~~~~--   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN--NSE----SND-----ES-PNEWIKWECGKEESLDK--   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh--hhh----hhc-----cC-CCeEEEeeCCCHHHHHH--
Confidence            45789999999999999999999999999999999987421  111    100     11 12578899999887654  


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----CC-eEEEecCCCCccCC-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----GS-AIINTTSVEPLWHS-  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~g-~iv~vsS~~~~~~~-  191 (272)
                           .++++|+||||||+..    ..+.+.++|++.+++|+.+++++++.++|.|++    ++ .++..+|.++..+. 
T Consensus        76 -----~~~~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~~  146 (245)
T PRK12367         76 -----QLASLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPAL  146 (245)
T ss_pred             -----hcCCCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCCC
Confidence                 3478999999999742    234678999999999999999999999999954    23 34444555443321 


Q ss_pred             -h--h--------H----HHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          192 -P--E--------A----RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       192 -~--~--------~----~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                       +  .        .    +.++.|+.+.+++|+.+.||+++|++..                 ....+|+|+|+.+++.+
T Consensus       147 ~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~-----------------~~~~~~~~vA~~i~~~~  209 (245)
T PRK12367        147 SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP-----------------IGIMSADFVAKQILDQA  209 (245)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc-----------------cCCCCHHHHHHHHHHHH
Confidence             1  1        1    2333455678999999999999998731                 12457999999999998


Q ss_pred             ccC
Q 039897          257 CNH  259 (272)
Q Consensus       257 s~~  259 (272)
                      +..
T Consensus       210 ~~~  212 (245)
T PRK12367        210 NLG  212 (245)
T ss_pred             hcC
Confidence            765

>PRK08017 oxidoreductase; Provisional

Probab=99.93  E-value=2.9e-24  Score=181.85  Aligned_cols=203  Identities=26%  Similarity=0.311  Sum_probs=157.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||+|+||.+++++|+++|++|++++|+.+..+.       +.+      .++..+.+|+++.+++..+++.+.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-------~~~------~~~~~~~~D~~~~~~~~~~~~~i~~   69 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-------MNS------LGFTGILLDLDDPESVERAADEVIA   69 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-------HHh------CCCeEEEeecCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999987433211       111      1367889999999999999998877


Q ss_pred             hc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh------
Q 039897          123 AY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       123 ~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~------  193 (272)
                      .. +.+|.+|||+|... ..++.+.+.+++++.+++|+.|++++++.+++.|++  .++||++||..+..+.+.      
T Consensus        70 ~~~~~~~~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  148 (256)
T PRK08017         70 LTDNRLYGLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAA  148 (256)
T ss_pred             hcCCCCeEEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHH
Confidence            54 68999999999754 357778899999999999999999999999999865  378999999877665533      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhc-cCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG-SEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                              .++++.++.+.+++++.+.||++.|++.............. .........+++|+++.+..+++..
T Consensus       149 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  223 (256)
T PRK08017        149 SKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESP  223 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCC
Confidence                    45677788889999999999999998764322111100000 0001123478999999999999765

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6e-24  Score=180.01  Aligned_cols=203  Identities=25%  Similarity=0.290  Sum_probs=151.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||+||||++++++|+++|++|++++|+......+.   +....    .+.++.++.+|+++++++.+.+.   
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~----~~~~~~~~~~D~~~~~~~~~~~~---   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALR---AEAAR----RGLALRVEKLDLTDAIDRAQAAE---   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHh----cCCcceEEEeeCCCHHHHHHHhc---
Confidence            579999999999999999999999999999999754332222   22222    34568889999999988877653   


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~------  193 (272)
                         +++|+||||||+.. ..++.+.+.++++..+++|+.+++.+++.+++.|++  .++||++||..+..+.+.      
T Consensus        72 ---~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~  147 (257)
T PRK09291         72 ---WDVDVLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCA  147 (257)
T ss_pred             ---CCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHH
Confidence               47999999999854 467888999999999999999999999999998865  379999999876554332      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-------HH-H-HHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-------EE-E-SAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-------~~-~-~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                              ++.++.++.+.||+++.|+||++.|++......       .. . ........+. ...+++|+++.++.++
T Consensus       148 sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  226 (257)
T PRK09291        148 SKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVI  226 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHh
Confidence                    456677788889999999999999987532111       00 0 0000011121 2357888888888876


Q ss_pred             ccC
Q 039897          257 CNH  259 (272)
Q Consensus       257 s~~  259 (272)
                      ..+
T Consensus       227 ~~~  229 (257)
T PRK09291        227 PAD  229 (257)
T ss_pred             cCC
Confidence            543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.4e-24  Score=175.89  Aligned_cols=196  Identities=19%  Similarity=0.200  Sum_probs=151.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+++|||++++||++++++|+++|++|++++|+.+..+.       +..    .  .+.++.+|+++.++++++++++..
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-------~~~----~--~~~~~~~D~~~~~~v~~~~~~~~~   68 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA-------LQA----L--GAEALALDVADPASVAGLAWKLDG   68 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-------HHh----c--cceEEEecCCCHHHHHHHHHHhcC
Confidence            689999999999999999999999999999987433222       211    1  245789999999999998877632


Q ss_pred             hcCCccEEEEcccccC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCC----h---h
Q 039897          123 AYGKIDILVNNAAVQY-KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHS----P---E  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~----~---~  193 (272)
                        +++|++|||+|... ...++.+.+.++|+..+++|+.+++++++++.++|++ .+++++++|..+..+.    +   .
T Consensus        69 --~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y  146 (222)
T PRK06953         69 --EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLY  146 (222)
T ss_pred             --CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCcccc
Confidence              47999999999853 2245667799999999999999999999999999865 5789999997653331    1   1


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                ++.++.++  .+++||+|+||+++|++...                .....+++.+..++.++... ...
T Consensus       147 ~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~----------------~~~~~~~~~~~~~~~~~~~~-~~~  207 (222)
T PRK06953        147 RASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGA----------------QAALDPAQSVAGMRRVIAQA-TRR  207 (222)
T ss_pred             HHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC----------------CCCCCHHHHHHHHHHHHHhc-Ccc
Confidence                      34444443  47999999999999998532                11246788888888887766 567


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      .+|..+.+|
T Consensus       208 ~~~~~~~~~  216 (222)
T PRK06953        208 DNGRFFQYD  216 (222)
T ss_pred             cCceEEeeC
Confidence            778877654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.8e-23  Score=172.58  Aligned_cols=195  Identities=25%  Similarity=0.277  Sum_probs=149.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .|++|||||+|+||+++++.|+++ ++|++++|+....+.+   .+        ....+.++.+|++++++++++++.+ 
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~---~~--------~~~~~~~~~~D~~~~~~~~~~~~~~-   69 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDEL---AA--------ELPGATPFPVDLTDPEAIAAAVEQL-   69 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHH---HH--------HhccceEEecCCCCHHHHHHHHHhc-
Confidence            579999999999999999999999 9999999974332211   11        1124778999999999888877653 


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-------  193 (272)
                         +++|+|||++|... ..++.+.+.++|.+.+++|+.+++.+++.+++.|++ .+++|++||..+..+.+.       
T Consensus        70 ---~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~  145 (227)
T PRK08219         70 ---GRLDVLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAAS  145 (227)
T ss_pred             ---CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHH
Confidence               58999999999854 356778889999999999999999999999998865 579999999877654432       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                             ++.++.++... |++++|.||.+.+++......     ......+..++.+++|+++.++++++..
T Consensus       146 K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~-----~~~~~~~~~~~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        146 KFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVA-----QEGGEYDPERYLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             HHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhh-----hhccccCCCCCCCHHHHHHHHHHHHcCC
Confidence                   34555555544 999999999998876432111     1111223456789999999999999765

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=2e-23  Score=174.55  Aligned_cols=205  Identities=24%  Similarity=0.263  Sum_probs=164.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++++|||+++|||.++|..+..+|++|.++.|+.+....+++.++....     ..++.+..+|+.|.+++...++++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~-----~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQ-----VEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhc-----cceeeEeccccccHHHHHHHHhhhhh
Confidence            6999999999999999999999999999999997666666666554432     22367889999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC---CeEEEecCCCCccCChh------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG---SAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---g~iv~vsS~~~~~~~~~------  193 (272)
                      ..+.+|.+|+|||... .+.+.+.+.++++..+++|+.++++++++.++.|++.   |+|+.+||..+..+.++      
T Consensus       109 ~~~~~d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~  187 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSP  187 (331)
T ss_pred             ccCCcceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccccc
Confidence            9999999999999965 4889999999999999999999999999999999874   59999999877666554      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCC-CCCCCCccchhhhhhhh
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP-MKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~L  255 (272)
                              +..++.|+.++||+|..+.|+.++||...+......  .....+. ......+||+|.+++.=
T Consensus       188 sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP--~~t~ii~g~ss~~~~e~~a~~~~~~  256 (331)
T KOG1210|consen  188 SKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKP--EETKIIEGGSSVIKCEEMAKAIVKG  256 (331)
T ss_pred             HHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCc--hheeeecCCCCCcCHHHHHHHHHhH
Confidence                    566777888899999999999999997644221111  1111111 11234677888776543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.90  E-value=6.7e-24  Score=169.46  Aligned_cols=221  Identities=18%  Similarity=0.167  Sum_probs=172.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..+|++|+||+|+|||..++..+..++-.+...++++...+ ++...       ...+........|++...-+.++++.
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~-------v~~gd~~v~~~g~~~e~~~l~al~e~   75 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLK-------VAYGDDFVHVVGDITEEQLLGALREA   75 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceE-------EEecCCcceechHHHHHHHHHHHHhh
Confidence            45789999999999999999988887766555444432221 11100       01233445567788888888999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcc--cCCHHHHHHHHHhhhHHHHHHHHHHHhccccC---CeEEEecCCCCccCChh-
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVE--EIDEERLERVFRTNIFSHFFMTRHSLRHMNEG---SAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~--~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---g~iv~vsS~~~~~~~~~-  193 (272)
                      .+.+++..|++|||||...+.....  ..+.++|++.++.|+++.+.|.+.++|.+++.   +.+||+||.+...+.++ 
T Consensus        76 ~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w  155 (253)
T KOG1204|consen   76 PRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW  155 (253)
T ss_pred             hhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH
Confidence            9999999999999999876544444  78899999999999999999999999999875   89999999998888766 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCC-----CCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-----SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                   .+.+|.|-. +++++.++.||.|+|+|-..     .+.++....+.+....++..+|.+.|+.+.+|
T Consensus       156 a~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L  234 (253)
T KOG1204|consen  156 AAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKL  234 (253)
T ss_pred             HHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHH
Confidence                         345555533 69999999999999998532     24566666676667788899999999999999


Q ss_pred             hccCCCCcccceeecc
Q 039897          256 ACNHCSSYITGQVLHP  271 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~i  271 (272)
                      +... . ++|||.++.
T Consensus       235 ~e~~-~-f~sG~~vdy  248 (253)
T KOG1204|consen  235 LEKG-D-FVSGQHVDY  248 (253)
T ss_pred             HHhc-C-ccccccccc
Confidence            8765 3 999998753

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.88  E-value=3.4e-21  Score=176.14  Aligned_cols=205  Identities=14%  Similarity=0.131  Sum_probs=145.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHH--HhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR--EAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ....||++|||||+|+||++++++|+++|++|++++|+......+...+....  ..+.....++.++.+|+++.+++.+
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            44678999999999999999999999999999999998544333332222111  0000012457889999999888765


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc-cCChh-
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL-WHSPE-  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~-~~~~~-  193 (272)
                      .       ++++|+||||+|....       ...++...+++|+.+..++++++...  ..++||++||..+. .+.+. 
T Consensus       156 a-------LggiDiVVn~AG~~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~a--gVgRIV~VSSiga~~~g~p~~  219 (576)
T PLN03209        156 A-------LGNASVVICCIGASEK-------EVFDVTGPYRIDYLATKNLVDAATVA--KVNHFILVTSLGTNKVGFPAA  219 (576)
T ss_pred             H-------hcCCCEEEEccccccc-------cccchhhHHHHHHHHHHHHHHHHHHh--CCCEEEEEccchhcccCcccc
Confidence            3       3689999999997421       12246788999999999999998764  34699999998653 21110 


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                 .+.+..++...||+++.|+||++.|++.... ............+.++....+|||+.+++|++++
T Consensus       220 ~~~sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~  295 (576)
T PLN03209        220 ILNLFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNR  295 (576)
T ss_pred             chhhHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cccceeeccccccCCCccCHHHHHHHHHHHHcCc
Confidence                       3566677788999999999999988764321 1111111122355677789999999999999854

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.88  E-value=4.4e-21  Score=200.12  Aligned_cols=175  Identities=18%  Similarity=0.143  Sum_probs=139.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccch-----------h----------------------------
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQE-----------E----------------------------   79 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~-----------~----------------------------   79 (272)
                      -+|+++|||||++|||.+++++|+++ |++|++++|+...           .                            
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            35899999999999999999999998 6999999998210           0                            


Q ss_pred             -----hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHH
Q 039897           80 -----KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV  154 (272)
Q Consensus        80 -----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~  154 (272)
                           .+..+.+..+.+    .+.++.++.+|++|.++++++++.+.+. +++|+||||||+.. .+.+.+.+.++|+++
T Consensus      2075 ~~~~~~ei~~~la~l~~----~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v 2148 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKA----AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDKTLEEFNAV 2148 (2582)
T ss_pred             ccchhHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccCCHHHHHHH
Confidence                 011111222222    4667889999999999999999999887 68999999999864 478899999999999


Q ss_pred             HHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----------HHHHHHHHhh--CCeEEEEEecccccCCCCC
Q 039897          155 FRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------ARGLALQLVE--RGIRVNGVAPGPIWTPLIP  222 (272)
Q Consensus       155 ~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------~~~la~e~~~--~gi~vn~i~PG~v~t~~~~  222 (272)
                      |++|+.|++++++++.+.+.  ++||++||.++.++.++          ...++..++.  .+++||+|+||+++|.|..
T Consensus      2149 ~~~nv~G~~~Ll~al~~~~~--~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2149 YGTKVDGLLSLLAALNAENI--KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHhCC--CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCccc
Confidence            99999999999999988654  48999999998877655          1233333333  2599999999999999863

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=1.7e-20  Score=149.19  Aligned_cols=168  Identities=18%  Similarity=0.218  Sum_probs=135.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      |+++||||+++||.+++++|+++|+ .|++++|+....+.....+.++.+    .+.++.++.+|++++++++++++++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA----LGAEVTVVACDVADRAALAAALAAIP   76 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999997 688888875544333222333332    45677889999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--------  193 (272)
                      ..++++|.||||+|... ..++...+.++++..+++|+.+++.+++.+.+.  ..+++++++|..+..+.+.        
T Consensus        77 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss~~~~~~~~~~~~y~~sk  153 (180)
T smart00822       77 ARLGPLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSSVAGVLGNPGQANYAAAN  153 (180)
T ss_pred             HHcCCeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEccHHHhcCCCCchhhHHHH
Confidence            88999999999999854 356778899999999999999999999998542  3478999999876555433        


Q ss_pred             --HHHHHHHHhhCCeEEEEEeccccc
Q 039897          194 --ARGLALQLVERGIRVNGVAPGPIW  217 (272)
Q Consensus       194 --~~~la~e~~~~gi~vn~i~PG~v~  217 (272)
                        ...++..+...|+++..+.||++.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      154 AFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHhcCCceEEEeecccc
Confidence              566777778899999999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.86  E-value=4.9e-20  Score=164.54  Aligned_cols=181  Identities=20%  Similarity=0.249  Sum_probs=132.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+++|+++||||+||||++++++|+++|++|++++|+.+.   +...   ...    ...++..+.+|+++++++.+.+
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~---l~~~---~~~----~~~~v~~v~~Dvsd~~~v~~~l  243 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDK---ITLE---ING----EDLPVKTLHWQVGQEAALAELL  243 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHH---Hhh----cCCCeEEEEeeCCCHHHHHHHh
Confidence            35789999999999999999999999999999999987432   2211   111    2234667899999988776543


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC------CeEEEecCCCCccCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG------SAIINTTSVEPLWHS  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------g~iv~vsS~~~~~~~  191 (272)
                             +++|++|||||+...    .+.+.+++++.+++|+.|+++++++++|.|+++      +.++++|+ +...+.
T Consensus       244 -------~~IDiLInnAGi~~~----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~~  311 (406)
T PRK07424        244 -------EKVDILIINHGINVH----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNPA  311 (406)
T ss_pred             -------CCCCEEEECCCcCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccCC
Confidence                   579999999998432    357889999999999999999999999999653      23566655 333321


Q ss_pred             --h--h-H----H---HHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          192 --P--E-A----R---GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       192 --~--~-~----~---~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                        +  . +    .   .+.++  ..++.|..+.||++.|++.+                 ....+|+++|+.+++.++.+
T Consensus       312 ~~~~Y~ASKaAl~~l~~l~~~--~~~~~I~~i~~gp~~t~~~~-----------------~~~~spe~vA~~il~~i~~~  372 (406)
T PRK07424        312 FSPLYELSKRALGDLVTLRRL--DAPCVVRKLILGPFKSNLNP-----------------IGVMSADWVAKQILKLAKRD  372 (406)
T ss_pred             CchHHHHHHHHHHHHHHHHHh--CCCCceEEEEeCCCcCCCCc-----------------CCCCCHHHHHHHHHHHHHCC
Confidence              1  1 1    1   22222  35678888899999888631                 12358999999999998765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.84  E-value=1.3e-19  Score=145.86  Aligned_cols=167  Identities=18%  Similarity=0.239  Sum_probs=129.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++|||||.||||..+++.|+++|+ ++++++|+........+.++++.+    .+.++.++.+|++|++++.++++++.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~----~g~~v~~~~~Dv~d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELES----AGARVEYVQCDVTDPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHH----TT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHh----CCCceeeeccCccCHHHHHHHHHHHHh
Confidence            799999999999999999999987 799999985444555566666665    577899999999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                      .+++++.|||+||... ..++.+.+.++++.++...+.+.+++.+.+.+.  +-..+|++||+++..+.++         
T Consensus        78 ~~~~i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SSis~~~G~~gq~~YaaAN~  154 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSSISSLLGGPGQSAYAAANA  154 (181)
T ss_dssp             TSS-EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEEHHHHTT-TTBHHHHHHHH
T ss_pred             ccCCcceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECChhHhccCcchHhHHHHHH
Confidence            9999999999999955 468899999999999999999999999988762  3458999999988888766         


Q ss_pred             -HHHHHHHHhhCCeEEEEEeccccc
Q 039897          194 -ARGLALQLVERGIRVNGVAPGPIW  217 (272)
Q Consensus       194 -~~~la~e~~~~gi~vn~i~PG~v~  217 (272)
                       ...++......|..+.+|+.|.++
T Consensus       155 ~lda~a~~~~~~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  155 FLDALARQRRSRGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHHTTSEEEEEEE-EBS
T ss_pred             HHHHHHHHHHhCCCCEEEEEccccC
Confidence             457777777789999999988764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06720 hypothetical protein; Provisional

Probab=99.83  E-value=3e-19  Score=141.65  Aligned_cols=143  Identities=25%  Similarity=0.307  Sum_probs=112.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+++++|+++||||++|||.++++.|+++|++|++++++...   +.+..+++..    .+.+..++.+|+++.++++++
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~   83 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES---GQATVEEITN----LGGEALFVSYDMEKQGDWQRV   83 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            355889999999999999999999999999999999987433   3333334432    345567889999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---------CCeEEEecCCCC
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---------GSAIINTTSVEP  187 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---------~g~iv~vsS~~~  187 (272)
                      ++++.+.+|++|++|||||+.....++++.+.++ ++  .+|+.+.++.++.+.+.|++         .|++..+|+.+.
T Consensus        84 v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         84 ISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            9999999999999999999866555666655555 44  67777778888888888644         367888888754


Q ss_pred             cc
Q 039897          188 LW  189 (272)
Q Consensus       188 ~~  189 (272)
                      .+
T Consensus       161 ~~  162 (169)
T PRK06720        161 SF  162 (169)
T ss_pred             cc
Confidence            43

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.82  E-value=8.5e-19  Score=153.06  Aligned_cols=177  Identities=18%  Similarity=0.184  Sum_probs=128.1

Q ss_pred             CCCcEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecccchhhh---------HHHHHHHHHHhhhcCCCCceEEeccCC
Q 039897           40 LRGKVALVTGGDSGIGRA--VAHCYALEGATVAFTYVKSQEEKD---------AQETLEILREAKTSDAKDPMAISADLG  108 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~a--ia~~l~~~G~~v~i~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (272)
                      --+|++||||+++|||.+  +|+.| ++|++|+++++.....+.         .....+.+.+    .+..+..+.+|++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~----~G~~a~~i~~DVs  113 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA----AGLYAKSINGDAF  113 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh----cCCceEEEEcCCC
Confidence            346999999999999999  89999 999999998864322111         1111222221    3456778999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEEcccccCCCCC----------------c-----------------ccCCHHHHHHHH
Q 039897          109 FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGS----------------V-----------------EEIDEERLERVF  155 (272)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~----------------~-----------------~~~~~~~~~~~~  155 (272)
                      ++++++++++.+.+.+|++|+||||+|......|                +                 ...+.++++.++
T Consensus       114 s~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv  193 (398)
T PRK13656        114 SDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV  193 (398)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH
Confidence            9999999999999999999999999998532110                1                 134445665554


Q ss_pred             HhhhH-HHHHH--HHHHHhccccCCeEEEecCCCCccCChh----------------HHHHHHHHhhCCeEEEEEecccc
Q 039897          156 RTNIF-SHFFM--TRHSLRHMNEGSAIINTTSVEPLWHSPE----------------ARGLALQLVERGIRVNGVAPGPI  216 (272)
Q Consensus       156 ~~N~~-~~~~l--~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------------~~~la~e~~~~gi~vn~i~PG~v  216 (272)
                      .+.-- ....+  .....++|.++++++.+|........|.                ++.|+.++++.|||+|++.+|++
T Consensus       194 ~vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~  273 (398)
T PRK13656        194 KVMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAV  273 (398)
T ss_pred             HhhccchHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence            44332 12233  4455677888999998888655433332                79999999999999999999999


Q ss_pred             cCCCC
Q 039897          217 WTPLI  221 (272)
Q Consensus       217 ~t~~~  221 (272)
                      .|.-.
T Consensus       274 ~T~As  278 (398)
T PRK13656        274 VTQAS  278 (398)
T ss_pred             cchhh
Confidence            99754

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=9.8e-19  Score=153.30  Aligned_cols=201  Identities=16%  Similarity=0.165  Sum_probs=138.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|++|||||+|+||++++++|+++|++|++++|+...........   ..  .....++.++.+|+++.+++.++++  
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~~~~~~D~~d~~~~~~~~~--   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLL---AL--DGAKERLKLFKADLLDEGSFELAID--   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHH---hc--cCCCCceEEEeCCCCCchHHHHHHc--
Confidence            4789999999999999999999999999999888755432221111   10  0012467889999999998888775  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---------  191 (272)
                           ++|+||||||....     ..+.+++...+++|+.+++++++++.+.+. .++||++||.+++.+.         
T Consensus        77 -----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~  145 (325)
T PLN02989         77 -----GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLGPNDV  145 (325)
T ss_pred             -----CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCCCCCc
Confidence                 58999999996421     223456788999999999999999988653 4699999997654321         


Q ss_pred             -----------------hh--HH----HHHHHHhh-CCeEEEEEecccccCCCCCCC--CCHHHH-HhhccCCCC----C
Q 039897          192 -----------------PE--AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSS--FSEEES-AQFGSEVPM----K  240 (272)
Q Consensus       192 -----------------~~--~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~--~~~~~~-~~~~~~~~~----~  240 (272)
                                       +.  +|    .++..+.+ +|+.++.+.|+.+..+.....  ...... ..+....+.    +
T Consensus       146 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r  225 (325)
T PLN02989        146 VDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHH  225 (325)
T ss_pred             cCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCc
Confidence                             01  22    23333333 589999999999988865321  111111 111222222    3


Q ss_pred             CCCCccchhhhhhhhhccC
Q 039897          241 RAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~~  259 (272)
                      .+.+.+|+|++++.++...
T Consensus       226 ~~i~v~Dva~a~~~~l~~~  244 (325)
T PLN02989        226 RFVDVRDVALAHVKALETP  244 (325)
T ss_pred             CeeEHHHHHHHHHHHhcCc
Confidence            5677899999999887654

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.82  E-value=1.7e-18  Score=151.84  Aligned_cols=194  Identities=15%  Similarity=0.058  Sum_probs=133.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      |+||++|||||+|+||++++++|+++|  ++|++++|+......+.   ..+      ...++.++.+|++|.+++.+++
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~---~~~------~~~~~~~v~~Dl~d~~~l~~~~   72 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQ---QKF------PAPCLRFFIGDVRDKERLTRAL   72 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHH---HHh------CCCcEEEEEccCCCHHHHHHHH
Confidence            578999999999999999999999987  78998888643321111   111      1246788999999999888776


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---H
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---A  194 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---~  194 (272)
                      +       .+|+|||+||...  .+....+   ....+++|+.++.++++++.+.  ..++||++||.....+...   +
T Consensus        73 ~-------~iD~Vih~Ag~~~--~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~--~~~~iV~~SS~~~~~p~~~Y~~s  138 (324)
T TIGR03589        73 R-------GVDYVVHAAALKQ--VPAAEYN---PFECIRTNINGAQNVIDAAIDN--GVKRVVALSTDKAANPINLYGAT  138 (324)
T ss_pred             h-------cCCEEEECcccCC--CchhhcC---HHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCCCCCCHHHHH
Confidence            4       5899999999742  2222223   2468999999999999999864  2358999999765543221   2


Q ss_pred             --------HHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhh--cc-CCCC------CCCCCccchhhhhhhhhc
Q 039897          195 --------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF--GS-EVPM------KRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       195 --------~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~--~~-~~~~------~~~~~~~dva~~~~~L~s  257 (272)
                              +.++.++...|++++++.||.+..+.-  ...+......  .. ..+.      +.+.+++|++++++.++.
T Consensus       139 K~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       139 KLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHh
Confidence                    233334456799999999999987631  1112111111  11 1221      235789999999988875


Q ss_pred             c
Q 039897          258 N  258 (272)
Q Consensus       258 ~  258 (272)
                      .
T Consensus       217 ~  217 (324)
T TIGR03589       217 R  217 (324)
T ss_pred             h
Confidence            4

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.81  E-value=3.6e-18  Score=145.79  Aligned_cols=208  Identities=18%  Similarity=0.183  Sum_probs=152.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+++|+||||+|-||++|+++|+++||+|..+.|++++.... ..+..+..    ...+...+..|++++++++..++  
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~----a~~~l~l~~aDL~d~~sf~~ai~--   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEG----AKERLKLFKADLLDEGSFDKAID--   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhccc----CcccceEEeccccccchHHHHHh--
Confidence            789999999999999999999999999999999998773332 22333322    45568899999999999999987  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-hh------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-PE------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-~~------  193 (272)
                           +.|+|+|.|......    ..+  .-.+.++..+.|+.++++++...- .-.|||++||.+..... +.      
T Consensus        78 -----gcdgVfH~Asp~~~~----~~~--~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~~~~v  145 (327)
T KOG1502|consen   78 -----GCDGVFHTASPVDFD----LED--PEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIGENSV  145 (327)
T ss_pred             -----CCCEEEEeCccCCCC----CCC--cHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCCCCcc
Confidence                 699999999875421    111  334789999999999999997653 23599999999877654 11      


Q ss_pred             -------------------------HHHHHHHHhhC-CeEEEEEecccccCCCCCCCCCH--HH-HHhhcc---CCC-C-
Q 039897          194 -------------------------ARGLALQLVER-GIRVNGVAPGPIWTPLIPSSFSE--EE-SAQFGS---EVP-M-  239 (272)
Q Consensus       194 -------------------------~~~la~e~~~~-gi~vn~i~PG~v~t~~~~~~~~~--~~-~~~~~~---~~~-~-  239 (272)
                                               +...|++|+++ |+.+..|+|+.|-.|.+......  .. ...+..   ..+ . 
T Consensus       146 vdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~  225 (327)
T KOG1502|consen  146 VDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFW  225 (327)
T ss_pred             cccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCc
Confidence                                     45567778775 59999999999999987663222  11 111111   111 1 


Q ss_pred             CCCCCccchhhhhhhhhccCCCCcccceeec
Q 039897          240 KRAGQPIEVAPCYVFLACNHCSSYITGQVLH  270 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~  270 (272)
                      ..+.+.+|||.+.+++++.+   .-+|+.|.
T Consensus       226 ~~~VdVrDVA~AHv~a~E~~---~a~GRyic  253 (327)
T KOG1502|consen  226 LAFVDVRDVALAHVLALEKP---SAKGRYIC  253 (327)
T ss_pred             eeeEeHHHHHHHHHHHHcCc---ccCceEEE
Confidence            12468899999999999876   23366553

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.79  E-value=4.1e-18  Score=150.86  Aligned_cols=199  Identities=18%  Similarity=0.115  Sum_probs=136.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++||++|||||+|+||+++++.|+++|++|++++|+.........   .+.     ...++.++.+|+++.+++.++++.
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~   73 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE---LLN-----LAKKIEDHFGDIRDAAKLRKAIAE   73 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH---HHh-----hcCCceEEEccCCCHHHHHHHHhh
Confidence            578999999999999999999999999999999987544322211   111     123567889999999999988875


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC---------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH---------  190 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~---------  190 (272)
                      .     ++|+|||+|+....     ..+.+++...+++|+.+++++++++... ...+++|++||...+..         
T Consensus        74 ~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~~e  142 (349)
T TIGR02622        74 F-----KPEIVFHLAAQPLV-----RKSYADPLETFETNVMGTVNLLEAIRAI-GSVKAVVNVTSDKCYRNDEWVWGYRE  142 (349)
T ss_pred             c-----CCCEEEECCccccc-----ccchhCHHHHHHHhHHHHHHHHHHHHhc-CCCCEEEEEechhhhCCCCCCCCCcc
Confidence            3     58999999996321     2345667788999999999999988642 22468999999643211         


Q ss_pred             ----Ch---h----------HHHHHHHHhh----CCeEEEEEecccccCCCCCC--CCCHHHHHhh--------ccCCCC
Q 039897          191 ----SP---E----------ARGLALQLVE----RGIRVNGVAPGPIWTPLIPS--SFSEEESAQF--------GSEVPM  239 (272)
Q Consensus       191 ----~~---~----------~~~la~e~~~----~gi~vn~i~PG~v~t~~~~~--~~~~~~~~~~--------~~~~~~  239 (272)
                          .+   .          ++.++.++.+    ++++++.+.|+.+..+....  ...+......        ......
T Consensus       143 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  222 (349)
T TIGR02622       143 TDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDAT  222 (349)
T ss_pred             CCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcc
Confidence                00   0          2334444433    38999999999998764211  1111111111        112233


Q ss_pred             CCCCCccchhhhhhhhhc
Q 039897          240 KRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s  257 (272)
                      ..+...+|++++++.++.
T Consensus       223 rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       223 RPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             cceeeHHHHHHHHHHHHH
Confidence            455788899999887765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.77  E-value=4e-17  Score=141.47  Aligned_cols=199  Identities=10%  Similarity=-0.001  Sum_probs=133.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +-.+|+||||||+|+||++++++|+++|++|+++.|+.... ...+.+..+..    ...++.++.+|+++.+++.+.+.
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~l~~----~~~~~~~~~~Dl~d~~~~~~~l~   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET-EIEKEIRGLSC----EEERLKVFDVDPLDYHSILDALK   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh-hHHHHHHhccc----CCCceEEEEecCCCHHHHHHHHc
Confidence            34578999999999999999999999999999998863322 22222222211    23467889999999988765553


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-------
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-------  191 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-------  191 (272)
                             ..|.++|.++....      .. .+++..+++|+.+++++++++.+.+. .++||++||.++....       
T Consensus        78 -------~~d~v~~~~~~~~~------~~-~~~~~~~~~nv~gt~~ll~aa~~~~~-v~riV~~SS~~a~~~~~~~~~~~  142 (297)
T PLN02583         78 -------GCSGLFCCFDPPSD------YP-SYDEKMVDVEVRAAHNVLEACAQTDT-IEKVVFTSSLTAVIWRDDNISTQ  142 (297)
T ss_pred             -------CCCEEEEeCccCCc------cc-ccHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEecchHheecccccCCCC
Confidence                   58888887654221      11 24578999999999999999988642 3699999997553210       


Q ss_pred             -------------------hh--HHHHHHHHh-----hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCC--CCCCCC
Q 039897          192 -------------------PE--ARGLALQLV-----ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV--PMKRAG  243 (272)
Q Consensus       192 -------------------~~--~~~la~e~~-----~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~  243 (272)
                                         +.  +|.++.++.     ..|+++++|+|+.|.++......  ..........  ....+.
T Consensus       143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--~~~~~~~~~~~~~~~~~v  220 (297)
T PLN02583        143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--PYLKGAAQMYENGVLVTV  220 (297)
T ss_pred             CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--hhhcCCcccCcccCcceE
Confidence                               01  244444433     35899999999999888653211  1111000000  112367


Q ss_pred             CccchhhhhhhhhccC
Q 039897          244 QPIEVAPCYVFLACNH  259 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~  259 (272)
                      +.+|+|++++..+...
T Consensus       221 ~V~Dva~a~~~al~~~  236 (297)
T PLN02583        221 DVNFLVDAHIRAFEDV  236 (297)
T ss_pred             EHHHHHHHHHHHhcCc
Confidence            8899999999988754

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.77  E-value=2.2e-17  Score=150.28  Aligned_cols=210  Identities=15%  Similarity=0.107  Sum_probs=139.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhh-------H------HHHHHHHHHhhhcCCCCceEEe
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD-------A------QETLEILREAKTSDAKDPMAIS  104 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~-------~------~~~~~~~~~~~~~~~~~~~~~~  104 (272)
                      ..+++|+||||||+|+||++++++|+++|++|+++++..+....       +      ...+..+..   ....++.++.
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~~v~  119 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE---VSGKEIELYV  119 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHH---hhCCcceEEE
Confidence            55888999999999999999999999999999998753221100       0      011111111   1234688999


Q ss_pred             ccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       105 ~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                      +|++|.+.+.++++..     ++|+|||+|+...  .+....+.+++...+++|+.|++++++++...-. ..++|++||
T Consensus       120 ~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv-~~~~V~~SS  191 (442)
T PLN02572        120 GDICDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP-DCHLVKLGT  191 (442)
T ss_pred             CCCCCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEec
Confidence            9999999998888753     6999999997632  3344455667788899999999999999876421 248999998


Q ss_pred             CCCccC----------------------Chh--------H----HHHHHHHhh-CCeEEEEEecccccCCCCCCC-----
Q 039897          185 VEPLWH----------------------SPE--------A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSS-----  224 (272)
Q Consensus       185 ~~~~~~----------------------~~~--------~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-----  224 (272)
                      ...+..                      .+.        +    ..+...+.+ +|+.+..+.|+.+..+.....     
T Consensus       192 ~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~  271 (442)
T PLN02572        192 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEE  271 (442)
T ss_pred             ceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccc
Confidence            754321                      011        2    333334433 599999999999987753210     


Q ss_pred             -------------CCHHHHHhh--c-------cCCCCCCCCCccchhhhhhhhhcc
Q 039897          225 -------------FSEEESAQF--G-------SEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       225 -------------~~~~~~~~~--~-------~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                   .........  .       .....+.+.+.+|++++++.++..
T Consensus       272 li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~  327 (442)
T PLN02572        272 LINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIAN  327 (442)
T ss_pred             cccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhC
Confidence                         000111111  1       112223567899999999988864

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.77  E-value=4.2e-18  Score=138.17  Aligned_cols=184  Identities=21%  Similarity=0.308  Sum_probs=142.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-----eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-----TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-----~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +..|++||||+++|||.+|+.+|.+..-     ++++++|+   ..+.++.+..+.+...+...++.++.+|+++..++.
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~---~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~   77 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRN---MSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVF   77 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCC---hhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHH
Confidence            3568999999999999999999998754     47777787   556677777777766555677888999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCC--------------------------CcccCCHHHHHHHHHhhhHHHHHHHHH
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAG--------------------------SVEEIDEERLERVFRTNIFSHFFMTRH  168 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~--------------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~  168 (272)
                      +..+++.+++.++|.+..|||++.-.+                          ..-..+.|++..+|+.|++|+|++.+.
T Consensus        78 ~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~  157 (341)
T KOG1478|consen   78 RASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRE  157 (341)
T ss_pred             HHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhh
Confidence            999999999999999999999842110                          011356688899999999999999999


Q ss_pred             HHhcccc--CCeEEEecCCCCccCChh---------------H--------HHHHHHHhhCCeEEEEEecccccCCCCCC
Q 039897          169 SLRHMNE--GSAIINTTSVEPLWHSPE---------------A--------RGLALQLVERGIRVNGVAPGPIWTPLIPS  223 (272)
Q Consensus       169 ~~~~~~~--~g~iv~vsS~~~~~~~~~---------------~--------~~la~e~~~~gi~vn~i~PG~v~t~~~~~  223 (272)
                      +.|++-.  ...+|.+||..+....-.               .        -++-+.+.+.|+--++++||..-|.+...
T Consensus       158 l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~  237 (341)
T KOG1478|consen  158 LEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSE  237 (341)
T ss_pred             hhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhh
Confidence            9999843  348999999754322111               1        12234455668999999999988887755


Q ss_pred             CCC
Q 039897          224 SFS  226 (272)
Q Consensus       224 ~~~  226 (272)
                      .+.
T Consensus       238 ~l~  240 (341)
T KOG1478|consen  238 YLN  240 (341)
T ss_pred             hhh
Confidence            443

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.76  E-value=7.1e-17  Score=141.36  Aligned_cols=201  Identities=19%  Similarity=0.203  Sum_probs=136.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.||+||||||+|.||.+++++|+++|++|+++.|+....+........ .    ....++.++.+|+++++++.++++ 
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~----~~~~~~~~~~~Dl~~~~~~~~~~~-   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLAL-D----GAKERLKLFKADLLEESSFEQAIE-   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhc-c----CCCCceEEEecCCCCcchHHHHHh-
Confidence            4689999999999999999999999999999988876543333222110 0    013467889999999998887775 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc-CC-------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW-HS-------  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~-~~-------  191 (272)
                            ++|+|||+|+....  ..    .+.+...+++|+.++.++++++.... .-++||++||.+.+. +.       
T Consensus        77 ------~~d~vih~A~~~~~--~~----~~~~~~~~~~nv~gt~~ll~~~~~~~-~v~rvV~~SS~~~~~~~~~~~~~~~  143 (322)
T PLN02986         77 ------GCDAVFHTASPVFF--TV----KDPQTELIDPALKGTINVLNTCKETP-SVKRVILTSSTAAVLFRQPPIEAND  143 (322)
T ss_pred             ------CCCEEEEeCCCcCC--CC----CCchhhhhHHHHHHHHHHHHHHHhcC-CccEEEEecchhheecCCccCCCCC
Confidence                  58999999997421  11    12235678999999999999886531 125899999975421 10       


Q ss_pred             ---------h---------h------HHHHHHHHhh-CCeEEEEEecccccCCCCCCC--CCHHHHHhhccC-----CCC
Q 039897          192 ---------P---------E------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSS--FSEEESAQFGSE-----VPM  239 (272)
Q Consensus       192 ---------~---------~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~-----~~~  239 (272)
                               +         .      +..++.+|.+ +|++++.++|+.+.++.....  ........+...     ...
T Consensus       144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~  223 (322)
T PLN02986        144 VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRF  223 (322)
T ss_pred             CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcC
Confidence                     0         0      2334445443 589999999999998864321  112222111111     122


Q ss_pred             CCCCCccchhhhhhhhhccC
Q 039897          240 KRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~  259 (272)
                      ..+.+.+|+|++++.++...
T Consensus       224 ~~~v~v~Dva~a~~~al~~~  243 (322)
T PLN02986        224 YRFVDVRDVALAHIKALETP  243 (322)
T ss_pred             cceeEHHHHHHHHHHHhcCc
Confidence            35678999999999988654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.75  E-value=8.9e-17  Score=142.44  Aligned_cols=200  Identities=16%  Similarity=0.137  Sum_probs=135.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ..|+||||||+|.||++++++|+++|++|++++|+......+.....   .  .....++.++.+|+++.+.+.++++  
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~--~~~~~~~~~v~~Dl~d~~~~~~~~~--   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLD---L--PGATTRLTLWKADLAVEGSFDDAIR--   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHh---c--cCCCCceEEEEecCCChhhHHHHHh--
Confidence            45799999999999999999999999999999887544333322111   0  0012357789999999988877765  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---------  191 (272)
                           .+|+|||+|+....    ..  .+.+...+++|+.++.++++++.+... .++||++||...++..         
T Consensus        77 -----~~d~ViH~A~~~~~----~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v~~SS~~~~~~~~~~~~~~~E  144 (351)
T PLN02650         77 -----GCTGVFHVATPMDF----ES--KDPENEVIKPTVNGMLSIMKACAKAKT-VRRIVFTSSAGTVNVEEHQKPVYDE  144 (351)
T ss_pred             -----CCCEEEEeCCCCCC----CC--CCchhhhhhHHHHHHHHHHHHHHhcCC-ceEEEEecchhhcccCCCCCCccCc
Confidence                 58999999986321    11  123356789999999999999987531 2489999997432210         


Q ss_pred             -----------------hh------HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCCHHHHHh---h-cc-----CCC
Q 039897          192 -----------------PE------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEESAQ---F-GS-----EVP  238 (272)
Q Consensus       192 -----------------~~------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~---~-~~-----~~~  238 (272)
                                       +.      +..++.++. .+|++++.+.|+.+.++.............   . ..     ...
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (351)
T PLN02650        145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIK  224 (351)
T ss_pred             ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCC
Confidence                             11      233344444 359999999999998886433222211111   1 11     112


Q ss_pred             CCCCCCccchhhhhhhhhccC
Q 039897          239 MKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       239 ~~~~~~~~dva~~~~~L~s~~  259 (272)
                      .+.+.+.+|+++++++++...
T Consensus       225 ~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        225 QGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             CcceeeHHHHHHHHHHHhcCc
Confidence            346789999999999998653

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.74  E-value=3.8e-17  Score=144.16  Aligned_cols=135  Identities=19%  Similarity=0.068  Sum_probs=101.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh--hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE--KDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .++++|+||||||+|+||++++++|+++|++|++++|+....  ..+......    ......++.++.+|++|.+++.+
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~   77 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYID----PHPNKARMKLHYGDLSDASSLRR   77 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccc----cccccCceEEEEecCCCHHHHHH
Confidence            467899999999999999999999999999999998864321  122111100    00023457889999999999998


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCC---eEEEecCCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGS---AIINTTSVE  186 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g---~iv~vsS~~  186 (272)
                      +++..     .+|+|||+|+.....     ...++....+++|+.++.++++++.+.+.+++   ++|++||.+
T Consensus        78 ~~~~~-----~~d~Vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~  141 (340)
T PLN02653         78 WLDDI-----KPDEVYNLAAQSHVA-----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSE  141 (340)
T ss_pred             HHHHc-----CCCEEEECCcccchh-----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHH
Confidence            88764     599999999974321     22344567789999999999999998875444   788898853

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.72  E-value=1.1e-15  Score=135.52  Aligned_cols=204  Identities=17%  Similarity=0.140  Sum_probs=135.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +-++++||||||+|.||++++++|+++|++|++++|+......   ....+.     ...++.++.+|+++.+.+.++++
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLH---LLSKWK-----EGDRLRLFRADLQEEGSFDEAVK   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHH---HHHhhc-----cCCeEEEEECCCCCHHHHHHHHc
Confidence            3567899999999999999999999999999999886432222   122111     23467889999999988877764


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHH--HHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL--ERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----  191 (272)
                             .+|+|||+|+...........+.+.+  ..++++|+.++.++++++.... ..++||++||.+.+...     
T Consensus        79 -------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~  150 (353)
T PLN02896         79 -------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGR  150 (353)
T ss_pred             -------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCC
Confidence                   58999999997532211122233333  5677888999999999987653 23589999996544210     


Q ss_pred             ------------------------hh------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHH---HHHhh-ccC
Q 039897          192 ------------------------PE------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEE---ESAQF-GSE  236 (272)
Q Consensus       192 ------------------------~~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~---~~~~~-~~~  236 (272)
                                              +.      +..+..++.+ +|+++..+.|+.+..+......+.-   ..... ...
T Consensus       151 ~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~  230 (353)
T PLN02896        151 WRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDS  230 (353)
T ss_pred             CCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCc
Confidence                                    11      2333344543 6899999999999887643222211   11100 110


Q ss_pred             C--C----------CCCCCCccchhhhhhhhhcc
Q 039897          237 V--P----------MKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       237 ~--~----------~~~~~~~~dva~~~~~L~s~  258 (272)
                      .  +          ...+.+.+|+|++++.++..
T Consensus       231 ~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        231 KLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             cccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence            0  0          12467899999999998864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.70  E-value=3.6e-16  Score=138.73  Aligned_cols=209  Identities=14%  Similarity=0.073  Sum_probs=134.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+||||||+|+||+++++.|.++|++++++.++.......... ..+.     ...++.++.+|++|.++++++++.   
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~---   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL-APVA-----QSERFAFEKVDICDRAELARVFTE---   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh-hhcc-----cCCceEEEECCCcChHHHHHHHhh---
Confidence            5899999999999999999999998855443322211111111 0100     223577889999999998888775   


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc------c-CCeEEEecCCCCccCC----
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN------E-GSAIINTTSVEPLWHS----  191 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~------~-~g~iv~vsS~~~~~~~----  191 (272)
                        .++|+|||+||....     ..+.+.+...+++|+.++.++++++.+.|.      + ..++|++||...+...    
T Consensus        73 --~~~D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  145 (355)
T PRK10217         73 --HQPDCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD  145 (355)
T ss_pred             --cCCCEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC
Confidence              269999999987432     234456788999999999999999987531      1 2489999996432210    


Q ss_pred             -------h---h---------HHHHHHHHh-hCCeEEEEEecccccCCCCCC-CCCHHHHHh-h-ccCC-------CCCC
Q 039897          192 -------P---E---------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPS-SFSEEESAQ-F-GSEV-------PMKR  241 (272)
Q Consensus       192 -------~---~---------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~-~~~~~~~~~-~-~~~~-------~~~~  241 (272)
                             +   .         +..+...++ ..++++..+.|+.+..+.... ......... . ....       ....
T Consensus       146 ~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  225 (355)
T PRK10217        146 DFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRD  225 (355)
T ss_pred             CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeC
Confidence                   0   0         233344443 358899999999887765321 111111111 1 1111       1234


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +.+.+|++.++..++...    ..|+++++
T Consensus       226 ~i~v~D~a~a~~~~~~~~----~~~~~yni  251 (355)
T PRK10217        226 WLYVEDHARALYCVATTG----KVGETYNI  251 (355)
T ss_pred             cCcHHHHHHHHHHHHhcC----CCCCeEEe
Confidence            678999999988887543    23566654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.70  E-value=1.7e-15  Score=133.50  Aligned_cols=200  Identities=18%  Similarity=0.179  Sum_probs=133.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +++++||||||+|.||++++++|+++|++|+++.|+......... ...+.     ...++.++.+|+++.+++.++++ 
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~-   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQ-----ELGDLKIFGADLTDEESFEAPIA-   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcC-----CCCceEEEEcCCCChHHHHHHHh-
Confidence            557899999999999999999999999999988887543322211 11110     12357889999999988777664 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--------  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--------  191 (272)
                            ++|+|||+|+...    ..  ..+.+...+++|+.++.++++++.... ..++||++||.+.+...        
T Consensus        80 ------~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~~~~~  146 (338)
T PLN00198         80 ------GCDLVFHVATPVN----FA--SEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSGTGLV  146 (338)
T ss_pred             ------cCCEEEEeCCCCc----cC--CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCCCCce
Confidence                  5899999998531    11  123345678999999999999987642 23599999997654310        


Q ss_pred             -----------------h---h------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCH---HHHHhhc-------
Q 039897          192 -----------------P---E------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSE---EESAQFG-------  234 (272)
Q Consensus       192 -----------------~---~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~---~~~~~~~-------  234 (272)
                                       |   .      +..++.++.+ +|+++..+.|+.|..+........   .......       
T Consensus       147 ~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T PLN00198        147 MNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLIN  226 (338)
T ss_pred             eccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccc
Confidence                             0   1      2334445544 589999999999988753211111   0000000       


Q ss_pred             --cCCC----CCCCCCccchhhhhhhhhccC
Q 039897          235 --SEVP----MKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       235 --~~~~----~~~~~~~~dva~~~~~L~s~~  259 (272)
                        ...+    ...+.+.+|++++++.++...
T Consensus       227 g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        227 GLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             cccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence              0111    135689999999999888654

>PLN02214 cinnamoyl-CoA reductase

Probab=99.70  E-value=1.4e-15  Score=134.33  Aligned_cols=195  Identities=17%  Similarity=0.153  Sum_probs=132.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +++|+||||||+|.||++++++|+++|++|++++|+......  .....+..    ...++.++.+|+++.+++.++++ 
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~-   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN--THLRELEG----GKERLILCKADLQDYEALKAAID-   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhH--HHHHHhhC----CCCcEEEEecCcCChHHHHHHHh-
Confidence            568899999999999999999999999999999987433211  11111111    12357788999999988887775 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--------  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--------  191 (272)
                            ++|+|||+|+...          +++...+++|+.++.++++++...-  -++||++||....++.        
T Consensus        81 ------~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 ------GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             ------cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCCCCCCcc
Confidence                  5999999998631          1246779999999999999987642  2489999996433211        


Q ss_pred             --------------h---h------HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCCH---HHHHhhccCC-----CC
Q 039897          192 --------------P---E------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSE---EESAQFGSEV-----PM  239 (272)
Q Consensus       192 --------------~---~------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~---~~~~~~~~~~-----~~  239 (272)
                                    +   .      +..++.++. .+|+++..+.|+.|..+........   .....+....     ..
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  222 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLT  222 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCC
Confidence                          0   0      233444443 3589999999999988754321111   1111111111     12


Q ss_pred             CCCCCccchhhhhhhhhccC
Q 039897          240 KRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~  259 (272)
                      ..+.+.+|+|++++.++...
T Consensus       223 ~~~i~V~Dva~a~~~al~~~  242 (342)
T PLN02214        223 QAYVDVRDVALAHVLVYEAP  242 (342)
T ss_pred             cCeeEHHHHHHHHHHHHhCc
Confidence            24668999999999888643

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.70  E-value=1.3e-15  Score=133.29  Aligned_cols=200  Identities=19%  Similarity=0.199  Sum_probs=132.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +||+||||||+|.||++++++|+++|++|++++|+.........    +.... ....++.++.+|+++++.+.++++  
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~--   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEH----LLALD-GAKERLHLFKANLLEEGSFDSVVD--   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHH----HHhcc-CCCCceEEEeccccCcchHHHHHc--
Confidence            46899999999999999999999999999999887543222211    11100 013467889999999988777765  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC--ccCC-------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP--LWHS-------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~--~~~~-------  191 (272)
                           ++|+|||+|+....  ..  .  +.....+++|+.++.++++++.... .-.+||++||.+.  +.+.       
T Consensus        76 -----~~d~Vih~A~~~~~--~~--~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~v~~SS~~~~~y~~~~~~~~~~  143 (322)
T PLN02662         76 -----GCEGVFHTASPFYH--DV--T--DPQAELIDPAVKGTLNVLRSCAKVP-SVKRVVVTSSMAAVAYNGKPLTPDVV  143 (322)
T ss_pred             -----CCCEEEEeCCcccC--CC--C--ChHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEccCHHHhcCCCcCCCCCCc
Confidence                 58999999987421  11  1  1224678999999999999987642 2348999999642  2110       


Q ss_pred             --------h---------h--HHHH----HHHHh-hCCeEEEEEecccccCCCCCCCC--CHHHHHhh-cc--CC--CCC
Q 039897          192 --------P---------E--ARGL----ALQLV-ERGIRVNGVAPGPIWTPLIPSSF--SEEESAQF-GS--EV--PMK  240 (272)
Q Consensus       192 --------~---------~--~~~l----a~e~~-~~gi~vn~i~PG~v~t~~~~~~~--~~~~~~~~-~~--~~--~~~  240 (272)
                              +         .  +|.+    +.++. .++++++.+.|+.+.++......  ........ ..  ..  ...
T Consensus       144 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (322)
T PLN02662        144 VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASY  223 (322)
T ss_pred             CCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCc
Confidence                    1         0  2333    33333 36899999999999888643211  11111111 11  11  123


Q ss_pred             CCCCccchhhhhhhhhccC
Q 039897          241 RAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~~  259 (272)
                      .+.+.+|+|++++.++..+
T Consensus       224 ~~i~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        224 RWVDVRDVANAHIQAFEIP  242 (322)
T ss_pred             CeEEHHHHHHHHHHHhcCc
Confidence            4678999999999988653

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.68  E-value=6.2e-15  Score=124.66  Aligned_cols=191  Identities=13%  Similarity=0.125  Sum_probs=123.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .....++++|||||+|+||++++++|+++|++|+++.|+..+.   .....        ...++.++.+|+++..  ..+
T Consensus        12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~--------~~~~~~~~~~Dl~d~~--~~l   78 (251)
T PLN00141         12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKA---KTSLP--------QDPSLQIVRADVTEGS--DKL   78 (251)
T ss_pred             cccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHH---HHhcc--------cCCceEEEEeeCCCCH--HHH
Confidence            3456789999999999999999999999999999998874322   11110        1235788999999731  122


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----  191 (272)
                      .+.+.   .++|+||+++|......+.         ..+++|+.+..++++++..  ...++||++||...+...     
T Consensus        79 ~~~~~---~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~~--~~~~~iV~iSS~~v~g~~~~~~~  144 (251)
T PLN00141         79 VEAIG---DDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACRK--AGVTRFILVSSILVNGAAMGQIL  144 (251)
T ss_pred             HHHhh---cCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHHH--cCCCEEEEEccccccCCCccccc
Confidence            22220   3699999999874321211         1246888899999998753  234699999998533211     


Q ss_pred             -h--h----------HHHHHHH-HhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          192 -P--E----------ARGLALQ-LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       192 -~--~----------~~~la~e-~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                       +  .          .+..+.+ +...|++++.|.||++.++.......     ............+++|+|+.+..++.
T Consensus       145 ~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~-----~~~~~~~~~~~i~~~dvA~~~~~~~~  219 (251)
T PLN00141        145 NPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIV-----MEPEDTLYEGSISRDQVAEVAVEALL  219 (251)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEE-----ECCCCccccCcccHHHHHHHHHHHhc
Confidence             0  0          1222222 45679999999999997764321110     00011112235689999999999986


Q ss_pred             cC
Q 039897          258 NH  259 (272)
Q Consensus       258 ~~  259 (272)
                      ..
T Consensus       220 ~~  221 (251)
T PLN00141        220 CP  221 (251)
T ss_pred             Ch
Confidence            54

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.66  E-value=1.9e-15  Score=133.90  Aligned_cols=216  Identities=13%  Similarity=0.029  Sum_probs=136.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhh-HHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD-AQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      -.|++|+||||||+|-||.+++++|.++|++|++++|....... +.........   ....++.++.+|+++.+.+.++
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Di~d~~~l~~~   87 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE---EQWSRFIFIQGDIRKFTDCQKA   87 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcccc---ccCCceEEEEccCCCHHHHHHH
Confidence            34788999999999999999999999999999999886432211 1111110000   0123577899999998877766


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----  192 (272)
                      ++       .+|+|||.|+.....     ...++....+++|+.|+.++++++...  .-.++|++||...+...+    
T Consensus        88 ~~-------~~d~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         88 CK-------NVDYVLHQAALGSVP-----RSLKDPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             hh-------CCCEEEECccccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHhhCCCCCCCC
Confidence            64       589999999974321     122233457899999999999988653  224899999875443211    


Q ss_pred             --------h-----HH----HHHHHHh-hCCeEEEEEecccccCCCCCCC-----CCHHHHHh-h--------ccCCCCC
Q 039897          193 --------E-----AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPSS-----FSEEESAQ-F--------GSEVPMK  240 (272)
Q Consensus       193 --------~-----~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~~-----~~~~~~~~-~--------~~~~~~~  240 (272)
                              .     +|    .+...+. .+|+++..+.|+.+..+.....     .-+..... .        .......
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~r  233 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSR  233 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceE
Confidence                    0     22    2223333 3589999999999987753211     11111111 1        1112223


Q ss_pred             CCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          241 RAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .+.+.+|++++++.++... .....|++++|
T Consensus       234 d~i~v~D~a~a~~~~~~~~-~~~~~~~~yni  263 (348)
T PRK15181        234 DFCYIENVIQANLLSATTN-DLASKNKVYNV  263 (348)
T ss_pred             eeEEHHHHHHHHHHHHhcc-cccCCCCEEEe
Confidence            4568899999988766432 11234666665

>PLN02240 UDP-glucose 4-epimerase

Probab=99.65  E-value=1.2e-14  Score=128.79  Aligned_cols=134  Identities=17%  Similarity=0.194  Sum_probs=98.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .|++|+||||||+|+||.+++++|+++|++|+++++.................   ....++.++.+|+++++++.++++
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~   78 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAG---DLGDNLVFHKVDLRDKEALEKVFA   78 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhc---ccCccceEEecCcCCHHHHHHHHH
Confidence            47789999999999999999999999999999998754332211111111110   123467889999999999988876


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .     ..+|+|||+|+.....     .+.+++...+++|+.++.++++++...  ...++|++||...
T Consensus        79 ~-----~~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~v  135 (352)
T PLN02240         79 S-----TRFDAVIHFAGLKAVG-----ESVAKPLLYYDNNLVGTINLLEVMAKH--GCKKLVFSSSATV  135 (352)
T ss_pred             h-----CCCCEEEEccccCCcc-----ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHH
Confidence            5     2799999999974311     133456788999999999999977542  2358999999643

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.65  E-value=1e-14  Score=126.82  Aligned_cols=206  Identities=15%  Similarity=0.054  Sum_probs=133.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|+||||+|+||.+++++|++.|  ++|+++++......  .+..+.+.     ...++.++.+|+++++++.++++.. 
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~-   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN--LENLADLE-----DNPRYRFVKGDIGDRELVSRLFTEH-   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh--hhhhhhhc-----cCCCcEEEEcCCcCHHHHHHHHhhc-
Confidence            48999999999999999999987  78888776422111  11111111     2346788899999999998888642 


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC----------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS----------  191 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~----------  191 (272)
                          .+|+|||+|+....     +.+.+.+...+++|+.++.++++++...+. +.+++++||...+...          
T Consensus        73 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~~~~e~~  142 (317)
T TIGR01181        73 ----QPDAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGDAFTETT  142 (317)
T ss_pred             ----CCCEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCCCcCCCC
Confidence                59999999997432     123445677899999999999998877643 2479999986432211          


Q ss_pred             -------hh-----HHHHHHHHh-hCCeEEEEEecccccCCCCC-CCCCHHHHHhhccC--CC-------CCCCCCccch
Q 039897          192 -------PE-----ARGLALQLV-ERGIRVNGVAPGPIWTPLIP-SSFSEEESAQFGSE--VP-------MKRAGQPIEV  248 (272)
Q Consensus       192 -------~~-----~~~la~e~~-~~gi~vn~i~PG~v~t~~~~-~~~~~~~~~~~~~~--~~-------~~~~~~~~dv  248 (272)
                             .+     +..+..++. ..++++..+.|+.+..+... ..............  .+       ...+.+.+|+
T Consensus       143 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~  222 (317)
T TIGR01181       143 PLAPSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDH  222 (317)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHH
Confidence                   00     233333433 35899999999988776532 11111111111111  11       1234578999


Q ss_pred             hhhhhhhhccCCCCcccceeecc
Q 039897          249 APCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ++++..++.+.    ..|+++++
T Consensus       223 a~~~~~~~~~~----~~~~~~~~  241 (317)
T TIGR01181       223 CRAIYLVLEKG----RVGETYNI  241 (317)
T ss_pred             HHHHHHHHcCC----CCCceEEe
Confidence            99998888643    24566654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.65  E-value=8.5e-15  Score=129.39  Aligned_cols=133  Identities=18%  Similarity=0.110  Sum_probs=95.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch--hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE--EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |+||||||+|.||++++++|+++|++|++++|+...  .+.+....+...   .....++.++.+|++|.+++.++++..
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPH---NVNKARMKLHYGDLTDSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccc---cccccceeEEEeccCCHHHHHHHHHhC
Confidence            689999999999999999999999999999987542  112221111110   001345788999999999998888753


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhc-cccCCeEEEecCCCCc
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRH-MNEGSAIINTTSVEPL  188 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~g~iv~vsS~~~~  188 (272)
                           ++|+|||+|+.....     ...+.-...+++|+.++.++++++.+. +++..++|++||...+
T Consensus        78 -----~~d~ViH~Aa~~~~~-----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vy  136 (343)
T TIGR01472        78 -----KPTEIYNLAAQSHVK-----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELY  136 (343)
T ss_pred             -----CCCEEEECCcccccc-----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhh
Confidence                 589999999974321     122223566789999999999999874 3333489999996443

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.62  E-value=1.7e-14  Score=123.80  Aligned_cols=201  Identities=17%  Similarity=0.152  Sum_probs=134.9

Q ss_pred             EEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           46 LVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        46 lVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      |||||+|-||++|+++|+++|  ++|.++++.......  ....        ......++.+|+++.+++.+.++     
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~--------~~~~~~~~~~Di~d~~~l~~a~~-----   65 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQ--------KSGVKEYIQGDITDPESLEEALE-----   65 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhh--------cccceeEEEeccccHHHHHHHhc-----
Confidence            799999999999999999999  789888876543221  1111        12223389999999999998886     


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  193 (272)
                        +.|+|||+|+......      ....+..+++|+.|+-++++++...  .-.++|++||.+.......          
T Consensus        66 --g~d~V~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~~~~~~~~~~dE~  135 (280)
T PF01073_consen   66 --GVDVVFHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDNYKGDPIINGDED  135 (280)
T ss_pred             --CCceEEEeCccccccC------cccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEeccCCCCcccCCcC
Confidence              6899999999854321      3445778999999999999999764  2358999999876654110          


Q ss_pred             -------------HHHHHHHHh----h------CCeEEEEEecccccCCCCCCCCCHH--HHHh------hccCCCCCCC
Q 039897          194 -------------ARGLALQLV----E------RGIRVNGVAPGPIWTPLIPSSFSEE--ESAQ------FGSEVPMKRA  242 (272)
Q Consensus       194 -------------~~~la~e~~----~------~gi~vn~i~PG~v~t~~~~~~~~~~--~~~~------~~~~~~~~~~  242 (272)
                                   +|.+|..+.    .      ..++..+|+|..|..+......+.-  ....      .....-...+
T Consensus       136 ~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~  215 (280)
T PF01073_consen  136 TPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDF  215 (280)
T ss_pred             CcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECc
Confidence                         555555422    2      2388889999999887653332211  1111      1111111224


Q ss_pred             CCccchhhhhhhhhc----cCCCCcccceeecc
Q 039897          243 GQPIEVAPCYVFLAC----NHCSSYITGQVLHP  271 (272)
Q Consensus       243 ~~~~dva~~~~~L~s----~~~~~~~tG~~i~i  271 (272)
                      .+.+++|.+++..+.    +.....+.||.++|
T Consensus       216 vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~i  248 (280)
T PF01073_consen  216 VYVENVAHAHVLAAQALLEPGKPERVAGQAYFI  248 (280)
T ss_pred             EeHHHHHHHHHHHHHHhccccccccCCCcEEEE
Confidence            578899998776432    21134678888875

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.61  E-value=1.9e-13  Score=121.16  Aligned_cols=214  Identities=18%  Similarity=0.136  Sum_probs=131.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhc---CC-CCceEEeccCCChHH-H-HH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTS---DA-KDPMAISADLGFDEN-C-KR  115 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~-~-~~  115 (272)
                      +||||||+|+||.+++++|+++|  ++|+++.|+........+..+.+......   .. .++.++.+|++++.. + ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  77999988755332222222222211100   01 478889999986531 0 11


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC----
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS----  191 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~----  191 (272)
                      ....+   ...+|+|||||+.....        ..+...+++|+.++.++++.+...-  ..+++++||...+...    
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~~--~~~~v~iSS~~v~~~~~~~~  147 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASGR--AKPLHYVSTISVLAAIDLST  147 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhCC--CceEEEEccccccCCcCCCC
Confidence            11222   14699999999975321        1245667899999999999886532  2369999998655321    


Q ss_pred             ------------------hh----HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHh------hccCCCC---
Q 039897          192 ------------------PE----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQ------FGSEVPM---  239 (272)
Q Consensus       192 ------------------~~----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~------~~~~~~~---  239 (272)
                                        ..    +..+..++.+.|++++.+.||.+.++...... ..+....      .....|.   
T Consensus       148 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~  227 (367)
T TIGR01746       148 VTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPE  227 (367)
T ss_pred             ccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCc
Confidence                              01    23334445556999999999999875221111 1111100      0011121   


Q ss_pred             --CCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          240 --KRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       240 --~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                        ..+.+.+|++++++.++... ....+|+++++
T Consensus       228 ~~~~~~~vddva~ai~~~~~~~-~~~~~~~~~~v  260 (367)
T TIGR01746       228 LTEDLTPVDYVARAIVALSSQP-AASAGGPVFHV  260 (367)
T ss_pred             cccCcccHHHHHHHHHHHHhCC-CcccCCceEEe
Confidence              22567889999999988655 33234677665

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.60  E-value=2.4e-14  Score=126.92  Aligned_cols=207  Identities=14%  Similarity=0.078  Sum_probs=129.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +||||||+|+||++++++|+++|++ |+++++.... ..... ...+.     ...++.++.+|++|.+++.+++++   
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~~-~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~---   71 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA-GNLES-LADVS-----DSERYVFEHADICDRAELDRIFAQ---   71 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCcc-chHHH-HHhcc-----cCCceEEEEecCCCHHHHHHHHHh---
Confidence            6999999999999999999999986 4444442111 11111 11110     134577889999999999888875   


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-------CCeEEEecCCCCccCC----
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-------GSAIINTTSVEPLWHS----  191 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-------~g~iv~vsS~~~~~~~----  191 (272)
                        .++|+|||+|+.....     .+.+.....+++|+.++.++++++.++|+.       ..++|++||...+...    
T Consensus        72 --~~~d~vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  144 (352)
T PRK10084         72 --HQPDAVMHLAAESHVD-----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPD  144 (352)
T ss_pred             --cCCCEEEECCcccCCc-----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccc
Confidence              3699999999974321     112334678999999999999999887631       2489999996433210    


Q ss_pred             --------h----------h---------HHHHHHHHh-hCCeEEEEEecccccCCCCC-CCCCHHHHHhh--ccCCC--
Q 039897          192 --------P----------E---------ARGLALQLV-ERGIRVNGVAPGPIWTPLIP-SSFSEEESAQF--GSEVP--  238 (272)
Q Consensus       192 --------~----------~---------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~-~~~~~~~~~~~--~~~~~--  238 (272)
                              +          .         +..++..++ ..|+++..+.|+.+..+... ..+........  ....+  
T Consensus       145 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PRK10084        145 EVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (352)
T ss_pred             cccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEe
Confidence                    0          0         233334443 34788888888888766531 11111111111  11111  


Q ss_pred             -----CCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          239 -----MKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       239 -----~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                           ...+.+.+|++.+++.++...    ..|+++++
T Consensus       225 ~~g~~~~~~v~v~D~a~a~~~~l~~~----~~~~~yni  258 (352)
T PRK10084        225 GKGDQIRDWLYVEDHARALYKVVTEG----KAGETYNI  258 (352)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhcC----CCCceEEe
Confidence                 233568899999998887643    23555554

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.60  E-value=6.7e-14  Score=122.46  Aligned_cols=187  Identities=18%  Similarity=0.143  Sum_probs=126.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++++||||+|+||..+++.|+++|++|++++|+......+             ...++.++.+|+++.+++.++++    
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~~~D~~~~~~l~~~~~----   63 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-------------EGLDVEIVEGDLRDPASLRKAVA----   63 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc-------------ccCCceEEEeeCCCHHHHHHHHh----
Confidence            3799999999999999999999999999999975432111             12357889999999988877765    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----------  191 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  191 (272)
                         .+|+|||+|+....    .   .+++...+++|+.++.++++++...  ..+++|++||...+...           
T Consensus        64 ---~~d~vi~~a~~~~~----~---~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~  131 (328)
T TIGR03466        64 ---GCRALFHVAADYRL----W---APDPEEMYAANVEGTRNLLRAALEA--GVERVVYTSSVATLGVRGDGTPADETTP  131 (328)
T ss_pred             ---CCCEEEEeceeccc----C---CCCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEechhhcCcCCCCCCcCccCC
Confidence               58999999986321    1   1234677899999999999988753  23589999997654321           


Q ss_pred             --------hh--HH----HHHHHHhh-CCeEEEEEecccccCCCCCCCCCH-HH-HHhhccCCC-----CCCCCCccchh
Q 039897          192 --------PE--AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSE-EE-SAQFGSEVP-----MKRAGQPIEVA  249 (272)
Q Consensus       192 --------~~--~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~-~~-~~~~~~~~~-----~~~~~~~~dva  249 (272)
                              +.  ++    .+..++.. .++++..+.|+.+..+........ .. ........+     ...+.+.+|+|
T Consensus       132 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  211 (328)
T TIGR03466       132 SSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVA  211 (328)
T ss_pred             CCcccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHH
Confidence                    01  22    23333333 489999999998876643221111 11 111111111     12345789999


Q ss_pred             hhhhhhhcc
Q 039897          250 PCYVFLACN  258 (272)
Q Consensus       250 ~~~~~L~s~  258 (272)
                      ++++.++..
T Consensus       212 ~a~~~~~~~  220 (328)
T TIGR03466       212 EGHLLALER  220 (328)
T ss_pred             HHHHHHHhC
Confidence            998887754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.59  E-value=1e-13  Score=124.44  Aligned_cols=208  Identities=13%  Similarity=0.079  Sum_probs=129.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ...+++++|||||+|.||++++++|+++|++|+++.|+......... ..++..    ...++.++.+|++|++++.+++
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~-~~~~~~----~~~~v~~v~~Dl~d~~~l~~~~  130 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNG-KEDTKK----ELPGAEVVFGDVTDADSLRKVL  130 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccch-hhHHhh----hcCCceEEEeeCCCHHHHHHHH
Confidence            44667899999999999999999999999999999997543211000 011111    2346789999999999999888


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---H
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---A  194 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---~  194 (272)
                      +.+   ..++|+||||++....  ..        ...+++|+.+..++++++...  .-+++|++||.....+...   .
T Consensus       131 ~~~---~~~~D~Vi~~aa~~~~--~~--------~~~~~vn~~~~~~ll~aa~~~--gv~r~V~iSS~~v~~p~~~~~~s  195 (390)
T PLN02657        131 FSE---GDPVDVVVSCLASRTG--GV--------KDSWKIDYQATKNSLDAGREV--GAKHFVLLSAICVQKPLLEFQRA  195 (390)
T ss_pred             HHh---CCCCcEEEECCccCCC--CC--------ccchhhHHHHHHHHHHHHHHc--CCCEEEEEeeccccCcchHHHHH
Confidence            753   1269999999985321  10        122467888888888887542  2358999999865544322   2


Q ss_pred             HHHHH-HHh--hCCeEEEEEecccccCCCCCCCCCHHHHHh------hccCC-CCCCCCCccchhhhhhhhhccCCCCcc
Q 039897          195 RGLAL-QLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQ------FGSEV-PMKRAGQPIEVAPCYVFLACNHCSSYI  264 (272)
Q Consensus       195 ~~la~-e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~dva~~~~~L~s~~~~~~~  264 (272)
                      +.... ++.  ..+++...+.|+.+..++... .  +....      +.... +...+.+.+|+|..++.++.++ .  .
T Consensus       196 K~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~-~--~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~-~--~  269 (390)
T PLN02657        196 KLKFEAELQALDSDFTYSIVRPTAFFKSLGGQ-V--EIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE-S--K  269 (390)
T ss_pred             HHHHHHHHHhccCCCCEEEEccHHHhcccHHH-H--HhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc-c--c
Confidence            22222 222  368999999998765432110 0  00000      01100 0112356779999888887543 1  2


Q ss_pred             cceeecc
Q 039897          265 TGQVLHP  271 (272)
Q Consensus       265 tG~~i~i  271 (272)
                      .|+++++
T Consensus       270 ~~~~~~I  276 (390)
T PLN02657        270 INKVLPI  276 (390)
T ss_pred             cCCEEEc
Confidence            3566554

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.59  E-value=1.5e-13  Score=121.04  Aligned_cols=126  Identities=16%  Similarity=0.203  Sum_probs=91.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      ++|||||+|+||.+++++|+++|++|+++++..+...........+      ...++.++.+|+++.+++.++++.    
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~----   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL------GGKHPTFVEGDIRNEALLTEILHD----   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh------cCCCceEEEccCCCHHHHHHHHhc----
Confidence            6999999999999999999999999999876543322221111111      234567889999999888887753    


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                       .++|+|||+|+..... .    ..+.....+++|+.++.++++++...  ..++||++||...
T Consensus        72 -~~~d~vvh~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~  127 (338)
T PRK10675         72 -HAIDTVIHFAGLKAVG-E----SVQKPLEYYDNNVNGTLRLISAMRAA--NVKNLIFSSSATV  127 (338)
T ss_pred             -CCCCEEEECCcccccc-c----hhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHh
Confidence             3699999999874321 1    12334567899999999999987643  2358999999753

>PLN02686 cinnamoyl-CoA reductase

Probab=99.59  E-value=1.2e-13  Score=123.15  Aligned_cols=203  Identities=15%  Similarity=0.124  Sum_probs=128.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhc--CCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS--DAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..+++|+||||||+|+||++++++|+++|++|+++.|+......+    ..+......  ...++.++.+|+++.+++.+
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l----~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~  124 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL----REMEMFGEMGRSNDGIWTVMANLTEPESLHE  124 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHHhhhccccccCCceEEEEcCCCCHHHHHH
Confidence            557799999999999999999999999999999888864332222    111110000  01347788999999998888


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC-Ccc-----
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE-PLW-----  189 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~-~~~-----  189 (272)
                      +++       ++|.++|.|+...... ...    ......++|+.++.++++++...- .-.++|++||.+ ..+     
T Consensus       125 ~i~-------~~d~V~hlA~~~~~~~-~~~----~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~~vyg~~~~  191 (367)
T PLN02686        125 AFD-------GCAGVFHTSAFVDPAG-LSG----YTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLACVWRQNYP  191 (367)
T ss_pred             HHH-------hccEEEecCeeecccc-ccc----ccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHHhcccccCC
Confidence            775       4789999998753221 111    112346789999999999886431 123899999953 110     


Q ss_pred             -C--C---------------h---h------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC--
Q 039897          190 -H--S---------------P---E------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM--  239 (272)
Q Consensus       190 -~--~---------------~---~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--  239 (272)
                       .  .               +   .      +..++..+.+ +|++++++.|+.|.++..................+.  
T Consensus       192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g  271 (367)
T PLN02686        192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLA  271 (367)
T ss_pred             CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCC
Confidence             0  0               0   0      2233333333 599999999999998864221111111111111111  


Q ss_pred             ---CCCCCccchhhhhhhhhc
Q 039897          240 ---KRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       240 ---~~~~~~~dva~~~~~L~s  257 (272)
                         ..+.+.+|++++++.++.
T Consensus       272 ~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        272 DGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             CCCcCeEEHHHHHHHHHHHHh
Confidence               135688999999988876

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.59  E-value=8.3e-14  Score=125.63  Aligned_cols=213  Identities=15%  Similarity=0.115  Sum_probs=144.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ...+.||+||||||+|.||+++++++++.+. ++++.+++..+.......+.+..     ...+..++-+|+.|.+.+.+
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~-----~~~~~~~~igdVrD~~~~~~  319 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKF-----PELKLRFYIGDVRDRDRVER  319 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhC-----CCcceEEEecccccHHHHHH
Confidence            4569999999999999999999999999987 57788887555544444443321     25678899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++..     ++|+|+|.|+.-+  -|+-+   ....+.+.+|+.|+.++++++...-.  .++|++|+--...+..-  
T Consensus       320 ~~~~~-----kvd~VfHAAA~KH--VPl~E---~nP~Eai~tNV~GT~nv~~aa~~~~V--~~~V~iSTDKAV~PtNvmG  387 (588)
T COG1086         320 AMEGH-----KVDIVFHAAALKH--VPLVE---YNPEEAIKTNVLGTENVAEAAIKNGV--KKFVLISTDKAVNPTNVMG  387 (588)
T ss_pred             HHhcC-----CCceEEEhhhhcc--Ccchh---cCHHHHHHHhhHhHHHHHHHHHHhCC--CEEEEEecCcccCCchHhh
Confidence            88753     6999999998743  34433   34477899999999999999987644  38999999776666543  


Q ss_pred             -HHHHH--------HHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC--------CCCCCccchhhhhhhhh
Q 039897          194 -ARGLA--------LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM--------KRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 -~~~la--------~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~L~  256 (272)
                       +|.+|        ......+.++.++.=|.|....  .+.-+-+.++..+.-|.        +-+.+..|.++.++...
T Consensus       388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr--GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~  465 (588)
T COG1086         388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR--GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAG  465 (588)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC--CCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHH
Confidence             33332        2222225788889888874432  22233333333332222        12234455556555554


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                          .....|+++.+|
T Consensus       466 ----a~~~gGeifvld  477 (588)
T COG1086         466 ----AIAKGGEIFVLD  477 (588)
T ss_pred             ----hhcCCCcEEEEc
Confidence                234567777655

>PLN02427 UDP-apiose/xylose synthase

Probab=99.58  E-value=2.9e-14  Score=127.96  Aligned_cols=211  Identities=13%  Similarity=0.076  Sum_probs=131.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.++||||||+|.||++++++|+++ |++|++++|+......+.   .. .  ......++.++.+|++|.+.+.++
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~---~~-~--~~~~~~~~~~~~~Dl~d~~~l~~~   83 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL---EP-D--TVPWSGRIQFHRINIKHDSRLEGL   83 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh---cc-c--cccCCCCeEEEEcCCCChHHHHHH
Confidence            4466678999999999999999999998 589999987643221111   00 0  000124688999999998887776


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC------
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH------  190 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~------  190 (272)
                      ++       .+|+|||+|+..... ...    .+-.+.+..|+.+..++++++...   +.++|++||...+..      
T Consensus        84 ~~-------~~d~ViHlAa~~~~~-~~~----~~~~~~~~~n~~gt~~ll~aa~~~---~~r~v~~SS~~vYg~~~~~~~  148 (386)
T PLN02427         84 IK-------MADLTINLAAICTPA-DYN----TRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFL  148 (386)
T ss_pred             hh-------cCCEEEEcccccChh-hhh----hChHHHHHHHHHHHHHHHHHHHhc---CCEEEEEeeeeeeCCCcCCCC
Confidence            64       489999999974321 111    111234568999999999988643   258999999643221      


Q ss_pred             ---------------------------------ChhHHHH----HHHHh-hCCeEEEEEecccccCCCCCC---------
Q 039897          191 ---------------------------------SPEARGL----ALQLV-ERGIRVNGVAPGPIWTPLIPS---------  223 (272)
Q Consensus       191 ---------------------------------~~~~~~l----a~e~~-~~gi~vn~i~PG~v~t~~~~~---------  223 (272)
                                                       +..++..    ..++. ..|+.+..+.|+.|..+....         
T Consensus       149 ~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~  228 (386)
T PLN02427        149 PKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSE  228 (386)
T ss_pred             CcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCcccccccccc
Confidence                                             0012322    23332 358999999999998764210         


Q ss_pred             CCCH---HHHHhhccC---------CCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          224 SFSE---EESAQFGSE---------VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       224 ~~~~---~~~~~~~~~---------~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ....   .........         .....+.+.+|+|++++.++... . ...|+++++
T Consensus       229 ~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~-~~~g~~yni  286 (386)
T PLN02427        229 GVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-A-RANGHIFNV  286 (386)
T ss_pred             ccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-c-cccCceEEe
Confidence            0000   001111111         11234678999999999887643 1 234566654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.57  E-value=1.2e-13  Score=115.04  Aligned_cols=200  Identities=19%  Similarity=0.167  Sum_probs=141.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      ||||||+|-||.+++++|.++|+.|+.+.++.........            ..++.++.+|+.+.+.++++++..    
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~------------~~~~~~~~~dl~~~~~~~~~~~~~----   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK------------KLNVEFVIGDLTDKEQLEKLLEKA----   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH------------HTTEEEEESETTSHHHHHHHHHHH----
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc------------cceEEEEEeecccccccccccccc----
Confidence            7999999999999999999999999888887554322211            116789999999999999999875    


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----------
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----------  193 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----------  193 (272)
                       .+|.|||+|+...     ...+.+.....++.|+.++.++++++...-  ..++|++||...+.....           
T Consensus        65 -~~d~vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~sS~~~y~~~~~~~~~e~~~~~~  136 (236)
T PF01370_consen   65 -NIDVVIHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREAG--VKRFIFLSSASVYGDPDGEPIDEDSPINP  136 (236)
T ss_dssp             -TESEEEEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--TSEEEEEEEGGGGTSSSSSSBETTSGCCH
T ss_pred             -CceEEEEeecccc-----cccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence             7999999998842     112335667888999999999999887642  259999999644332210           


Q ss_pred             ----------HHHHHHHHhh-CCeEEEEEecccccCCC----CCCCCCHHHHHhh---------ccCCCCCCCCCccchh
Q 039897          194 ----------ARGLALQLVE-RGIRVNGVAPGPIWTPL----IPSSFSEEESAQF---------GSEVPMKRAGQPIEVA  249 (272)
Q Consensus       194 ----------~~~la~e~~~-~gi~vn~i~PG~v~t~~----~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva  249 (272)
                                ...+..++.+ .++++..+.|+.+..+.    .............         ........+...+|+|
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  216 (236)
T PF01370_consen  137 LSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLA  216 (236)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHH
Confidence                      2333343443 48999999999998877    1111111122111         1222234456889999


Q ss_pred             hhhhhhhccCCCCcccceeecc
Q 039897          250 PCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +++++++... .  ..|++++|
T Consensus       217 ~~~~~~~~~~-~--~~~~~yNi  235 (236)
T PF01370_consen  217 EAIVAALENP-K--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHHS-C--TTTEEEEE
T ss_pred             HHHHHHHhCC-C--CCCCEEEe
Confidence            9999999876 3  67888875

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.52  E-value=3.8e-13  Score=119.03  Aligned_cols=201  Identities=15%  Similarity=0.117  Sum_probs=128.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCC-ChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLG-FDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~  120 (272)
                      ++||||||+|-||++++++|+++ |++|++++|+...   ...    +.     ...++.++.+|++ +.+.+.++++  
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~---~~~----~~-----~~~~~~~~~~Dl~~~~~~~~~~~~--   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR---LGD----LV-----NHPRMHFFEGDITINKEWIEYHVK--   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH---HHH----hc-----cCCCeEEEeCCCCCCHHHHHHHHc--
Confidence            47999999999999999999986 6999999875321   111    10     2345788999998 5555544443  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---------  191 (272)
                           ++|+|||+|+......     ..++....+++|+.++.++++++...   +.++|++||...+...         
T Consensus        68 -----~~d~ViH~aa~~~~~~-----~~~~p~~~~~~n~~~~~~ll~aa~~~---~~~~v~~SS~~vyg~~~~~~~~ee~  134 (347)
T PRK11908         68 -----KCDVILPLVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAVKY---GKHLVFPSTSEVYGMCPDEEFDPEA  134 (347)
T ss_pred             -----CCCEEEECcccCChHH-----hhcCcHHHHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeccCCCcCcCccc
Confidence                 5999999999743211     11233566799999999999988753   3589999997433210         


Q ss_pred             ----------h---h--HHHH----HHHHh-hCCeEEEEEecccccCCCCCCC------CC---HHHHHhh---------
Q 039897          192 ----------P---E--ARGL----ALQLV-ERGIRVNGVAPGPIWTPLIPSS------FS---EEESAQF---------  233 (272)
Q Consensus       192 ----------~---~--~~~l----a~e~~-~~gi~vn~i~PG~v~t~~~~~~------~~---~~~~~~~---------  233 (272)
                                +   .  +|..    ...+. .+|+.+..+.|+.+..+.....      ..   ......+         
T Consensus       135 ~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  214 (347)
T PRK11908        135 SPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLV  214 (347)
T ss_pred             cccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEe
Confidence                      0   0  2322    33332 3688999999988866643110      00   1111111         


Q ss_pred             ccCCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          234 GSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       234 ~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ....+...+.+.+|++++++.++... .....|+++++
T Consensus       215 ~~g~~~r~~i~v~D~a~a~~~~~~~~-~~~~~g~~yni  251 (347)
T PRK11908        215 DGGSQKRAFTDIDDGIDALMKIIENK-DGVASGKIYNI  251 (347)
T ss_pred             cCCceeeccccHHHHHHHHHHHHhCc-cccCCCCeEEe
Confidence            11122345789999999999988654 22234677665

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.51  E-value=2.1e-13  Score=130.33  Aligned_cols=205  Identities=13%  Similarity=0.083  Sum_probs=131.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH-HHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN-CKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~  116 (272)
                      -.++++||||||+|.||++++++|+++ |++|++++|......   ...         ...++.++.+|+++..+ ++++
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~---~~~---------~~~~~~~~~gDl~d~~~~l~~~  379 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAIS---RFL---------GHPRFHFVEGDISIHSEWIEYH  379 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhh---hhc---------CCCceEEEeccccCcHHHHHHH
Confidence            367889999999999999999999986 799999998643211   100         23457888999998654 3333


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC------
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH------  190 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~------  190 (272)
                      +       .++|+|||+|+.......     ..+....+++|+.++.++++++...   +.++|++||...+..      
T Consensus       380 l-------~~~D~ViHlAa~~~~~~~-----~~~~~~~~~~Nv~~t~~ll~a~~~~---~~~~V~~SS~~vyg~~~~~~~  444 (660)
T PRK08125        380 I-------KKCDVVLPLVAIATPIEY-----TRNPLRVFELDFEENLKIIRYCVKY---NKRIIFPSTSEVYGMCTDKYF  444 (660)
T ss_pred             h-------cCCCEEEECccccCchhh-----ccCHHHHHHhhHHHHHHHHHHHHhc---CCeEEEEcchhhcCCCCCCCc
Confidence            3       269999999997542111     1122456899999999999998764   248999999643321      


Q ss_pred             -------------C----hh-HH----HHHHHHh-hCCeEEEEEecccccCCCCCCC---------CCHHHHHhh-----
Q 039897          191 -------------S----PE-AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPSS---------FSEEESAQF-----  233 (272)
Q Consensus       191 -------------~----~~-~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~~---------~~~~~~~~~-----  233 (272)
                                   .    ++ +|    .+...+. .+|+++..+.|+.+..+.....         .........     
T Consensus       445 ~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~  524 (660)
T PRK08125        445 DEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP  524 (660)
T ss_pred             CccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCC
Confidence                         0    01 23    3333333 3589999999999877642110         001111111     


Q ss_pred             ----ccCCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          234 ----GSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       234 ----~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                          ........+.+.+|++++++.++... .....|+++++
T Consensus       525 i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~-~~~~~g~iyni  565 (660)
T PRK08125        525 IKLVDGGKQKRCFTDIRDGIEALFRIIENK-DNRCDGQIINI  565 (660)
T ss_pred             eEEeCCCceeeceeeHHHHHHHHHHHHhcc-ccccCCeEEEc
Confidence                11122334678999999998887643 22234666654

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.51  E-value=4.6e-13  Score=117.10  Aligned_cols=193  Identities=12%  Similarity=0.053  Sum_probs=121.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +|+||||+|.||++++++|+++|++|+++.|+.+...       .+      ...++.++.+|++|++++.+.++     
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-------~l------~~~~v~~v~~Dl~d~~~l~~al~-----   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-------FL------KEWGAELVYGDLSLPETLPPSFK-----   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-------hH------hhcCCEEEECCCCCHHHHHHHHC-----
Confidence            7999999999999999999999999999999743211       11      12357889999999988876664     


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc-c-CChh--HHHHHH
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL-W-HSPE--ARGLAL  199 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~-~-~~~~--~~~la~  199 (272)
                        ++|+|||+++... .      +   .....++|+.++.++++++...-  -.++|++||.... . ..+.  .+..+.
T Consensus        64 --g~d~Vi~~~~~~~-~------~---~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~~~~~~~~~~~K~~~e  129 (317)
T CHL00194         64 --GVTAIIDASTSRP-S------D---LYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAEQYPYIPLMKLKSDIE  129 (317)
T ss_pred             --CCCEEEECCCCCC-C------C---ccchhhhhHHHHHHHHHHHHHcC--CCEEEEeccccccccCCChHHHHHHHHH
Confidence              6899999876421 1      1   12346678899999998886532  2489999986432 1 1222  333333


Q ss_pred             H-HhhCCeEEEEEecccccCCCCCCCCCHHH--HH-hhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          200 Q-LVERGIRVNGVAPGPIWTPLIPSSFSEEE--SA-QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       200 e-~~~~gi~vn~i~PG~v~t~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      + +...++....+.|+.+...+......+..  .. ..........+.+.+|+|+++..++..+ .  ..|+++++
T Consensus       130 ~~l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~--~~~~~~ni  202 (317)
T CHL00194        130 QKLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLP-E--TKNKTFPL  202 (317)
T ss_pred             HHHHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCc-c--ccCcEEEe
Confidence            3 33468999999998654332211100000  00 0000111123456799999998888643 2  23666654

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.51  E-value=8.8e-13  Score=115.16  Aligned_cols=156  Identities=17%  Similarity=0.118  Sum_probs=107.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|+||.+++++|+++|++|+++++..+.....   .....     ...++..+.+|+++++++.++++.    
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~----   68 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEA---LKRGE-----RITRVTFVEGDLRDRELLDRLFEE----   68 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhh---hhhhc-----cccceEEEECCCCCHHHHHHHHHh----
Confidence            489999999999999999999999999887643322111   11111     112577889999999998888763    


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC------------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS------------  191 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~------------  191 (272)
                       +++|+||||||.....     ....+..+.++.|+.++.++++++...  ...++|++||...+...            
T Consensus        69 -~~~d~vv~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~~g~~~~~~~~e~~~~~  140 (328)
T TIGR01179        69 -HKIDAVIHFAGLIAVG-----ESVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAVYGEPSSIPISEDSPLG  140 (328)
T ss_pred             -CCCcEEEECccccCcc-----hhhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhhcCCCCCCCccccCCCC
Confidence             4799999999974321     122344567899999999999987643  23589999986443211            


Q ss_pred             -----hhHHHH----HHHHhh--CCeEEEEEecccccCC
Q 039897          192 -----PEARGL----ALQLVE--RGIRVNGVAPGPIWTP  219 (272)
Q Consensus       192 -----~~~~~l----a~e~~~--~gi~vn~i~PG~v~t~  219 (272)
                           ..++..    ..++..  .++++..+.|+.+..+
T Consensus       141 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       141 PINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGA  179 (328)
T ss_pred             CCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCC
Confidence                 002222    222322  5899999999887665

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.49  E-value=1.4e-12  Score=112.29  Aligned_cols=174  Identities=19%  Similarity=0.170  Sum_probs=117.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|.||.+++++|.++|++|+++.|.                            .+|+.+.+++.+.++.    
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------------~~d~~~~~~~~~~~~~----   48 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------------QLDLTDPEALERLLRA----   48 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------------ccCCCCHHHHHHHHHh----
Confidence            47999999999999999999999999988763                            4689998888888764    


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC------------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS------------  191 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~------------  191 (272)
                       ..+|+|||+|+.....     .........+++|+.++.++++++...   +.++|++||...+.+.            
T Consensus        49 -~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~E~~~~~  119 (287)
T TIGR01214        49 -IRPDAVVNTAAYTDVD-----GAESDPEKAFAVNALAPQNLARAAARH---GARLVHISTDYVFDGEGKRPYREDDATN  119 (287)
T ss_pred             -CCCCEEEECCcccccc-----ccccCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEeeeeeecCCCCCCCCCCCCCC
Confidence             2589999999974311     112234667899999999999987643   2489999996433221            


Q ss_pred             hh-----HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHhhccC--C-----CCCCCCCccchhhhhhhhhcc
Q 039897          192 PE-----ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE--V-----PMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       192 ~~-----~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~dva~~~~~L~s~  258 (272)
                      +.     .+..+.++.. .+.++..+.|+.+..+.....+...........  .     ....+...+|++++++.++..
T Consensus       120 ~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  199 (287)
T TIGR01214       120 PLNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQR  199 (287)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhh
Confidence            00     3444443332 367889999999877653221111111111111  1     112345678999999998864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.49  E-value=1.6e-13  Score=116.38  Aligned_cols=205  Identities=17%  Similarity=0.150  Sum_probs=122.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCc----eEEeccCCChHHHHHHHHH
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDP----MAISADLGFDENCKRVVDE  119 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~D~~~~~~~~~~~~~  119 (272)
                      ||||||+|.||++++++|++.+. ++++++++....-.+..   +++...  ...++    .++-+|++|.+.+.+++++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~---~l~~~~--~~~~v~~~~~~vigDvrd~~~l~~~~~~   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELER---ELRSRF--PDPKVRFEIVPVIGDVRDKERLNRIFEE   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHH---HCHHHC----TTCEEEEE--CTSCCHHHHHHHHTT-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHH---HHhhcc--cccCcccccCceeecccCHHHHHHHHhh
Confidence            79999999999999999999985 69999998554444433   332111  12234    3457899999988888875


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---HHH
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---ARG  196 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---~~~  196 (272)
                      .     ++|+|+|.|+.-+  -++.+.   ...+.+++|+.|+.++++++..+-.  .++|++|+--+..+..-   ++.
T Consensus        76 ~-----~pdiVfHaAA~Kh--Vpl~E~---~p~eav~tNv~GT~nv~~aa~~~~v--~~~v~ISTDKAv~PtnvmGatKr  143 (293)
T PF02719_consen   76 Y-----KPDIVFHAAALKH--VPLMED---NPFEAVKTNVLGTQNVAEAAIEHGV--ERFVFISTDKAVNPTNVMGATKR  143 (293)
T ss_dssp             ------T-SEEEE--------HHHHCC---CHHHHHHHHCHHHHHHHHHHHHTT---SEEEEEEECGCSS--SHHHHHHH
T ss_pred             c-----CCCEEEEChhcCC--CChHHh---CHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEccccccCCCCcHHHHHHH
Confidence            3     7999999998732  233333   3467799999999999999987633  49999999755555433   444


Q ss_pred             HHHHHh----h----CCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC--------CCCCCccchhhhhhhhhccCC
Q 039897          197 LALQLV----E----RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM--------KRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       197 la~e~~----~----~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~L~s~~~  260 (272)
                      ++..+-    .    .+.++.+|.=|.|...-  .+.-+-+..+..+.-|+        +-+.+.+|.++.++..+... 
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~--GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~-  220 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR--GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA-  220 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGT--TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCC--CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC-
Confidence            444432    2    35788999988874321  22234444444333332        23457778888777665432 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                         ..|+++.+|
T Consensus       221 ---~~geifvl~  229 (293)
T PF02719_consen  221 ---KGGEIFVLD  229 (293)
T ss_dssp             ----TTEEEEE-
T ss_pred             ---CCCcEEEec
Confidence               457777554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.47  E-value=1.8e-12  Score=124.24  Aligned_cols=210  Identities=12%  Similarity=0.058  Sum_probs=131.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++|+||||||+|.||++++++|+++  |++|+++++.... ........ .     ....++.++.+|+++.+.+.+++
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~~l~~-~-----~~~~~v~~~~~Dl~d~~~~~~~~   76 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLKNLNP-S-----KSSPNFKFVKGDIASADLVNYLL   76 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhhhhhh-c-----ccCCCeEEEECCCCChHHHHHHH
Confidence            56789999999999999999999998  6788888774211 11111110 0     02346888999999988776654


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC------
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS------  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~------  191 (272)
                      ..     .++|+|||+|+.....     ....+....+++|+.++.++++++... ..-.++|++||...+...      
T Consensus        77 ~~-----~~~D~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~vkr~I~~SS~~vyg~~~~~~~~  145 (668)
T PLN02260         77 IT-----EGIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDADV  145 (668)
T ss_pred             hh-----cCCCEEEECCCccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEcchHHhCCCcccccc
Confidence            32     3799999999974321     122233567899999999999988653 113589999996432210      


Q ss_pred             ---------h-----hHHHH----HHHHh-hCCeEEEEEecccccCCCCCC-CCCHHHHHhh--ccCC-------CCCCC
Q 039897          192 ---------P-----EARGL----ALQLV-ERGIRVNGVAPGPIWTPLIPS-SFSEEESAQF--GSEV-------PMKRA  242 (272)
Q Consensus       192 ---------~-----~~~~l----a~e~~-~~gi~vn~i~PG~v~t~~~~~-~~~~~~~~~~--~~~~-------~~~~~  242 (272)
                               |     .+|..    ..++. ..++.+..+.|+.|..+.... ..........  ...+       ....+
T Consensus       146 ~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~  225 (668)
T PLN02260        146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSY  225 (668)
T ss_pred             CccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEee
Confidence                     0     02332    33333 358999999999887764321 1111111111  1111       12235


Q ss_pred             CCccchhhhhhhhhccCCCCcccceeecc
Q 039897          243 GQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       243 ~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .+.+|+|+++..++...    ..|+++++
T Consensus       226 ihV~Dva~a~~~~l~~~----~~~~vyni  250 (668)
T PLN02260        226 LYCEDVAEAFEVVLHKG----EVGHVYNI  250 (668)
T ss_pred             EEHHHHHHHHHHHHhcC----CCCCEEEE
Confidence            68899999998887543    23556654

>PRK05865 hypothetical protein; Provisional

Probab=99.46  E-value=1.7e-12  Score=125.08  Aligned_cols=163  Identities=15%  Similarity=0.068  Sum_probs=116.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +++||||+|.||++++++|+++|++|++++|+....                ...++.++.+|+++.+++.++++     
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----------------~~~~v~~v~gDL~D~~~l~~al~-----   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----------------WPSSADFIAADIRDATAVESAMT-----   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----------------cccCceEEEeeCCCHHHHHHHHh-----
Confidence            699999999999999999999999999999863210                12246789999999998887775     


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHHHHH-h
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQL-V  202 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la~e~-~  202 (272)
                        ++|+|||+|+...   +           .+++|+.++.++++++...  ..++||++||..        +..+.++ .
T Consensus        61 --~vD~VVHlAa~~~---~-----------~~~vNv~GT~nLLeAa~~~--gvkr~V~iSS~~--------K~aaE~ll~  114 (854)
T PRK05865         61 --GADVVAHCAWVRG---R-----------NDHINIDGTANVLKAMAET--GTGRIVFTSSGH--------QPRVEQMLA  114 (854)
T ss_pred             --CCCEEEECCCccc---c-----------hHHHHHHHHHHHHHHHHHc--CCCeEEEECCcH--------HHHHHHHHH
Confidence              5899999997632   1           3688999999998877543  235899999975        2222222 2


Q ss_pred             hCCeEEEEEecccccCCCCCCCCCHHHHHhhc--cCCC------CCCCCCccchhhhhhhhhcc
Q 039897          203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG--SEVP------MKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       203 ~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~dva~~~~~L~s~  258 (272)
                      .+++.+..+.|+.+..+....     ......  ...+      ...+.+.+|++++++.++..
T Consensus       115 ~~gl~~vILRp~~VYGP~~~~-----~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~  173 (854)
T PRK05865        115 DCGLEWVAVRCALIFGRNVDN-----WVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLD  173 (854)
T ss_pred             HcCCCEEEEEeceEeCCChHH-----HHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhC
Confidence            468999999999987764211     111110  0111      11356789999999888753

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.44  E-value=2.9e-12  Score=111.42  Aligned_cols=188  Identities=15%  Similarity=0.158  Sum_probs=117.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH--
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN--  122 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--  122 (272)
                      ||||||+|.||++++++|+++|++++++.++.......                 .....+|+.|..+.+.+++.+..  
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-----------------~~~~~~~~~d~~~~~~~~~~~~~~~   64 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----------------VNLVDLDIADYMDKEDFLAQIMAGD   64 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-----------------HhhhhhhhhhhhhHHHHHHHHhccc
Confidence            79999999999999999999999777766653321110                 01234567666666666655542  


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----------  191 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  191 (272)
                      .++++|+|||+|+.....    ..+.   ...++.|+.++.++++++...   +.++|++||...+...           
T Consensus        65 ~~~~~d~Vih~A~~~~~~----~~~~---~~~~~~n~~~t~~ll~~~~~~---~~~~i~~SS~~vyg~~~~~~~~E~~~~  134 (308)
T PRK11150         65 DFGDIEAIFHEGACSSTT----EWDG---KYMMDNNYQYSKELLHYCLER---EIPFLYASSAATYGGRTDDFIEEREYE  134 (308)
T ss_pred             ccCCccEEEECceecCCc----CCCh---HHHHHHHHHHHHHHHHHHHHc---CCcEEEEcchHHhCcCCCCCCccCCCC
Confidence            245799999999864321    1122   346899999999999998753   3479999997533211           


Q ss_pred             -h---h--HHHH----HHHHh-hCCeEEEEEecccccCCCCCC--CCCH---HHHHhhc-cCC---------CCCCCCCc
Q 039897          192 -P---E--ARGL----ALQLV-ERGIRVNGVAPGPIWTPLIPS--SFSE---EESAQFG-SEV---------PMKRAGQP  245 (272)
Q Consensus       192 -~---~--~~~l----a~e~~-~~gi~vn~i~PG~v~t~~~~~--~~~~---~~~~~~~-~~~---------~~~~~~~~  245 (272)
                       |   .  +|..    ..++. ..++++..+.|+.+..+....  ....   ....... ...         ....+.+.
T Consensus       135 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v  214 (308)
T PRK11150        135 KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYV  214 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeH
Confidence             0   0  2333    33332 358999999999887765322  1111   1111111 111         12345688


Q ss_pred             cchhhhhhhhhccC
Q 039897          246 IEVAPCYVFLACNH  259 (272)
Q Consensus       246 ~dva~~~~~L~s~~  259 (272)
                      +|++++++.++...
T Consensus       215 ~D~a~a~~~~~~~~  228 (308)
T PRK11150        215 GDVAAVNLWFWENG  228 (308)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999988887643

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.41  E-value=5.4e-12  Score=112.66  Aligned_cols=192  Identities=17%  Similarity=0.058  Sum_probs=122.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|+||||||+|.||++++++|.++|++|++++|.....  .    ..       ......++.+|+++.+.+.+++.  
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~--~----~~-------~~~~~~~~~~Dl~d~~~~~~~~~--   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH--M----SE-------DMFCHEFHLVDLRVMENCLKVTK--   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc--c----cc-------ccccceEEECCCCCHHHHHHHHh--
Confidence            568999999999999999999999999999999863211  0    00       11124678899999877666553  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC----------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH----------  190 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~----------  190 (272)
                           ++|+|||+|+..... .....   +....+..|+.++.++++++...  .-.++|++||...+..          
T Consensus        85 -----~~D~Vih~Aa~~~~~-~~~~~---~~~~~~~~N~~~t~nll~aa~~~--~vk~~V~~SS~~vYg~~~~~~~~~~~  153 (370)
T PLN02695         85 -----GVDHVFNLAADMGGM-GFIQS---NHSVIMYNNTMISFNMLEAARIN--GVKRFFYASSACIYPEFKQLETNVSL  153 (370)
T ss_pred             -----CCCEEEEcccccCCc-ccccc---CchhhHHHHHHHHHHHHHHHHHh--CCCEEEEeCchhhcCCccccCcCCCc
Confidence                 589999999864321 11111   12345678999999999988643  2248999999643210          


Q ss_pred             --------Chh-----HH----HHHHHHh-hCCeEEEEEecccccCCCCCC-----CCCHHHHHhhc---cCC-------
Q 039897          191 --------SPE-----AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPS-----SFSEEESAQFG---SEV-------  237 (272)
Q Consensus       191 --------~~~-----~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~-----~~~~~~~~~~~---~~~-------  237 (272)
                              .+.     +|    .+...+. ..|+++..+.|+.+..+.-..     ...........   ..+       
T Consensus       154 ~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~  233 (370)
T PLN02695        154 KESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGK  233 (370)
T ss_pred             CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCC
Confidence                    010     22    2223333 358999999999988774211     01112211111   111       


Q ss_pred             CCCCCCCccchhhhhhhhhcc
Q 039897          238 PMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       238 ~~~~~~~~~dva~~~~~L~s~  258 (272)
                      ....+...+|++.+++.++..
T Consensus       234 ~~r~~i~v~D~a~ai~~~~~~  254 (370)
T PLN02695        234 QTRSFTFIDECVEGVLRLTKS  254 (370)
T ss_pred             eEEeEEeHHHHHHHHHHHHhc
Confidence            123356889999999887654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.40  E-value=2.1e-11  Score=105.97  Aligned_cols=189  Identities=15%  Similarity=0.073  Sum_probs=125.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      .||||||+|.||.+++++|.++|++|+.++|........             . ..+.++.+|+++.+.+.+.++     
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~-~~~~~~~~d~~~~~~~~~~~~-----   62 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPL-------------L-SGVEFVVLDLTDRDLVDELAK-----   62 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccccc-------------c-cccceeeecccchHHHHHHHh-----
Confidence            399999999999999999999999999999975443211             1 346788899998855554444     


Q ss_pred             cCCc-cEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----------
Q 039897          124 YGKI-DILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----------  191 (272)
Q Consensus       124 ~g~l-d~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  191 (272)
                        .. |+|||+|+......  ...+  +....+.+|+.++.++++++..  ....++|+.||.+..+..           
T Consensus        63 --~~~d~vih~aa~~~~~~--~~~~--~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~~~~E~~~  134 (314)
T COG0451          63 --GVPDAVIHLAAQSSVPD--SNAS--DPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPLPIDEDLG  134 (314)
T ss_pred             --cCCCEEEEccccCchhh--hhhh--CHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCceECCCCCCCCcccccC
Confidence              23 99999999854321  1111  4566899999999999999976  234589997775544422           


Q ss_pred             -------hh-----HHHHHHHHhh-CCeEEEEEecccccCCCCCCCC----CHHHHHhhccCCC---C-------CCCCC
Q 039897          192 -------PE-----ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSF----SEEESAQFGSEVP---M-------KRAGQ  244 (272)
Q Consensus       192 -------~~-----~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~---~-------~~~~~  244 (272)
                             .+     +..+..++.. .|+.+..+.|+.+..+......    ............+   .       ..+..
T Consensus       135 ~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  214 (314)
T COG0451         135 PPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVY  214 (314)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEe
Confidence                   11     2222333333 5799999999988776654432    1111111111111   1       12456


Q ss_pred             ccchhhhhhhhhccC
Q 039897          245 PIEVAPCYVFLACNH  259 (272)
Q Consensus       245 ~~dva~~~~~L~s~~  259 (272)
                      .+|++.+++.+++..
T Consensus       215 v~D~a~~~~~~~~~~  229 (314)
T COG0451         215 VDDVADALLLALENP  229 (314)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            889999999998765

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=8.9e-12  Score=104.52  Aligned_cols=125  Identities=21%  Similarity=0.147  Sum_probs=95.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||.|-||++++.+|++.|++|++++.-.......-.            ...+.+++.|+.|.+-+++++++   
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~------------~~~~~f~~gDi~D~~~L~~vf~~---   65 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL------------KLQFKFYEGDLLDRALLTAVFEE---   65 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh------------hccCceEEeccccHHHHHHHHHh---
Confidence            479999999999999999999999999999886443222111            11167999999999888888876   


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                        .++|.|||.||...-.     .+.+.-.+.++.|+.|+..|++++...-.  .+|||-||.+ .++.|
T Consensus        66 --~~idaViHFAa~~~Vg-----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv--~~~vFSStAa-vYG~p  125 (329)
T COG1087          66 --NKIDAVVHFAASISVG-----ESVQNPLKYYDNNVVGTLNLIEAMLQTGV--KKFIFSSTAA-VYGEP  125 (329)
T ss_pred             --cCCCEEEECccccccc-----hhhhCHHHHHhhchHhHHHHHHHHHHhCC--CEEEEecchh-hcCCC
Confidence              3899999999974322     35566678899999999999999876533  3777777754 44443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=1e-11  Score=103.73  Aligned_cols=202  Identities=14%  Similarity=0.103  Sum_probs=134.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCe--EEEEeccc--chhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGAT--VAFTYVKS--QEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~--v~i~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +++|||||.|.||.++++++.++..+  |+.++.=.  .+.+.+..    +.     ...+..+++.|+.|.+.+.++++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~----~~-----~~~~~~fv~~DI~D~~~v~~~~~   71 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLAD----VE-----DSPRYRFVQGDICDRELVDRLFK   71 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHh----hh-----cCCCceEEeccccCHHHHHHHHH
Confidence            47999999999999999999988664  45554311  11222222    21     46789999999999988888887


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +-     .+|+|||.|+-..-     +-+..+-...+++|+.|+++|++++..+..+ -+++++|+-..++....     
T Consensus        72 ~~-----~~D~VvhfAAESHV-----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~~~~~F  140 (340)
T COG1088          72 EY-----QPDAVVHFAAESHV-----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGLDDDAF  140 (340)
T ss_pred             hc-----CCCeEEEechhccc-----cccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccCCCCCc
Confidence            52     69999999987442     2244444667899999999999999876532 47899887543322211     


Q ss_pred             --------------HH----HHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHH-------------HHhhccCCCCCC
Q 039897          194 --------------AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEE-------------SAQFGSEVPMKR  241 (272)
Q Consensus       194 --------------~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~-------------~~~~~~~~~~~~  241 (272)
                                    ++    -|.+.|.. +|+.++...+..-..|.   .++++.             ...++.....+.
T Consensus       141 tE~tp~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPy---qfpEKlIP~~I~nal~g~~lpvYGdG~~iRD  217 (340)
T COG1088         141 TETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPY---QFPEKLIPLMIINALLGKPLPVYGDGLQIRD  217 (340)
T ss_pred             ccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCC---cCchhhhHHHHHHHHcCCCCceecCCcceee
Confidence                          22    23333333 68888888776554442   122222             122334444455


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ....+|-+.++..++...    .-||+++|
T Consensus       218 Wl~VeDh~~ai~~Vl~kg----~~GE~YNI  243 (340)
T COG1088         218 WLYVEDHCRAIDLVLTKG----KIGETYNI  243 (340)
T ss_pred             eEEeHhHHHHHHHHHhcC----cCCceEEe
Confidence            668999999999988754    33999886

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.37  E-value=1.9e-11  Score=106.40  Aligned_cols=187  Identities=17%  Similarity=0.173  Sum_probs=117.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      ||||||+|.||.+++++|.++|+ .|+++++..+.. .+    ..+       .  ...+..|+++.+.++.+.+.   .
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~----~~~-------~--~~~~~~d~~~~~~~~~~~~~---~   63 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF----LNL-------A--DLVIADYIDKEDFLDRLEKG---A   63 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh----hhh-------h--heeeeccCcchhHHHHHHhh---c
Confidence            68999999999999999999998 688877653221 11    111       0  13456778776666555442   3


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC------------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS------------  191 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~------------  191 (272)
                      +.++|+|||+|+....       ..++....+++|+.++.++++++...   +.++|++||...+...            
T Consensus        64 ~~~~D~vvh~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~v~~SS~~vy~~~~~~~~e~~~~~~  133 (314)
T TIGR02197        64 FGKIEAIFHQGACSDT-------TETDGEYMMENNYQYSKRLLDWCAEK---GIPFIYASSAATYGDGEAGFREGRELER  133 (314)
T ss_pred             cCCCCEEEECccccCc-------cccchHHHHHHHHHHHHHHHHHHHHh---CCcEEEEccHHhcCCCCCCcccccCcCC
Confidence            4689999999997321       12345678899999999999988653   3479999996543210            


Q ss_pred             hh-----HH----HHHHHHh---hCCeEEEEEecccccCCCCCC--CCCH---HHHHhhcc--CC-------------CC
Q 039897          192 PE-----AR----GLALQLV---ERGIRVNGVAPGPIWTPLIPS--SFSE---EESAQFGS--EV-------------PM  239 (272)
Q Consensus       192 ~~-----~~----~la~e~~---~~gi~vn~i~PG~v~t~~~~~--~~~~---~~~~~~~~--~~-------------~~  239 (272)
                      +.     +|    .+..++.   ..++++..+.|+.+..+....  ....   ........  .+             ..
T Consensus       134 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (314)
T TIGR02197       134 PLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQL  213 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCce
Confidence            11     23    3333332   235688889998887664321  1111   11111111  01             11


Q ss_pred             CCCCCccchhhhhhhhhcc
Q 039897          240 KRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~  258 (272)
                      ..+.+.+|++++++.++..
T Consensus       214 ~~~i~v~D~a~~i~~~~~~  232 (314)
T TIGR02197       214 RDFVYVKDVVDVNLWLLEN  232 (314)
T ss_pred             eeeEEHHHHHHHHHHHHhc
Confidence            3467889999999988864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.36  E-value=4.2e-11  Score=114.67  Aligned_cols=204  Identities=19%  Similarity=0.112  Sum_probs=126.5

Q ss_pred             EEEEEcCCCchHHHHHHHHH--HcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH--HHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYA--LEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN--CKRVVDE  119 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~--~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~~~~~  119 (272)
                      +||||||+|.||++++++|+  +.|++|++++|+... ..+.......      ...++.++.+|+++++.  ....++.
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~------~~~~v~~~~~Dl~~~~~~~~~~~~~~   74 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYW------GADRVVPLVGDLTEPGLGLSEADIAE   74 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhc------CCCcEEEEecccCCccCCcCHHHHHH
Confidence            79999999999999999999  589999999996322 2222221111      12468889999998531  0112222


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--------  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--------  191 (272)
                      +    .++|+|||+|+.....     .+   .....++|+.++.++++++...  ...++|++||...+...        
T Consensus        75 l----~~~D~Vih~Aa~~~~~-----~~---~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~~SS~~v~g~~~~~~~e~~  140 (657)
T PRK07201         75 L----GDIDHVVHLAAIYDLT-----AD---EEAQRAANVDGTRNVVELAERL--QAATFHHVSSIAVAGDYEGVFREDD  140 (657)
T ss_pred             h----cCCCEEEECceeecCC-----CC---HHHHHHHHhHHHHHHHHHHHhc--CCCeEEEEeccccccCccCcccccc
Confidence            2    4799999999974321     12   2456688999999999987653  23589999997554211        


Q ss_pred             -----------hhHHHHHHHHhh--CCeEEEEEecccccCCCCCCCC---C-H----HHHHhhc---cCCC-------CC
Q 039897          192 -----------PEARGLALQLVE--RGIRVNGVAPGPIWTPLIPSSF---S-E----EESAQFG---SEVP-------MK  240 (272)
Q Consensus       192 -----------~~~~~la~e~~~--~gi~vn~i~PG~v~t~~~~~~~---~-~----~~~~~~~---~~~~-------~~  240 (272)
                                 ..+|..+..+..  .|+++..+.|+.+..+......   . .    .....+.   ...+       ..
T Consensus       141 ~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (657)
T PRK07201        141 FDEGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRT  220 (657)
T ss_pred             chhhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCee
Confidence                       013444444332  5899999999998765321110   0 0    0111111   0111       11


Q ss_pred             CCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          241 RAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .+.+.+|+++++..++...   ...|+++++
T Consensus       221 ~~v~vddva~ai~~~~~~~---~~~g~~~ni  248 (657)
T PRK07201        221 NIVPVDYVADALDHLMHKD---GRDGQTFHL  248 (657)
T ss_pred             eeeeHHHHHHHHHHHhcCc---CCCCCEEEe
Confidence            2346789999999887643   345777764

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.35  E-value=4.7e-11  Score=108.76  Aligned_cols=194  Identities=14%  Similarity=0.072  Sum_probs=122.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ...-++++||||||+|.||++++++|+++|++|+++++.....   .+......     ...++.++..|+.++.     
T Consensus       114 ~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~---~~~~~~~~-----~~~~~~~i~~D~~~~~-----  180 (442)
T PLN02206        114 GLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGR---KENVMHHF-----SNPNFELIRHDVVEPI-----  180 (442)
T ss_pred             ccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccc---hhhhhhhc-----cCCceEEEECCccChh-----
Confidence            3456789999999999999999999999999999988653211   11110000     2345677888886642     


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----  191 (272)
                      +       .++|+|||+|+......  .   ..+....+++|+.++.++++++...   +.++|++||...+...     
T Consensus       181 l-------~~~D~ViHlAa~~~~~~--~---~~~p~~~~~~Nv~gt~nLleaa~~~---g~r~V~~SS~~VYg~~~~~p~  245 (442)
T PLN02206        181 L-------LEVDQIYHLACPASPVH--Y---KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQ  245 (442)
T ss_pred             h-------cCCCEEEEeeeecchhh--h---hcCHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECChHHhCCCCCCCC
Confidence            1       25899999998743211  1   1123567899999999999988653   2489999997543210     


Q ss_pred             ---------h------h--HH----HHHHHHh-hCCeEEEEEecccccCCCCCC---CCCHHHHHhh-c-cCCC------
Q 039897          192 ---------P------E--AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPS---SFSEEESAQF-G-SEVP------  238 (272)
Q Consensus       192 ---------~------~--~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~---~~~~~~~~~~-~-~~~~------  238 (272)
                               +      .  +|    .++.++. ..++++..+.|+.+..+....   ..-....... . ..+.      
T Consensus       246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~  325 (442)
T PLN02206        246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  325 (442)
T ss_pred             CccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCC
Confidence                     1      0  23    3333333 358999999998887664211   1111111111 1 1111      


Q ss_pred             -CCCCCCccchhhhhhhhhcc
Q 039897          239 -MKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       239 -~~~~~~~~dva~~~~~L~s~  258 (272)
                       ...+...+|++++++.++..
T Consensus       326 ~~rdfi~V~Dva~ai~~a~e~  346 (442)
T PLN02206        326 QTRSFQFVSDLVEGLMRLMEG  346 (442)
T ss_pred             EEEeEEeHHHHHHHHHHHHhc
Confidence             22356889999999888754

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.35  E-value=9.8e-12  Score=105.20  Aligned_cols=128  Identities=22%  Similarity=0.228  Sum_probs=99.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh-hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE-KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +++||||||+|-||.+.+.+|.++|+.|++++.-.+.. +.++. .+++..    ...++.+++.|+.|.+.++++++..
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r-~~~l~~----~~~~v~f~~~Dl~D~~~L~kvF~~~   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKR-VRQLLG----EGKSVFFVEGDLNDAEALEKLFSEV   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHH-HHHhcC----CCCceEEEEeccCCHHHHHHHHhhc
Confidence            57999999999999999999999999999998755443 33332 222211    3578999999999999999999874


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                           ++|.|+|.|+...-.     .+.+.-....+.|+.|+.+++..+..+-  ...+|+.||..
T Consensus        77 -----~fd~V~Hfa~~~~vg-----eS~~~p~~Y~~nNi~gtlnlLe~~~~~~--~~~~V~sssat  130 (343)
T KOG1371|consen   77 -----KFDAVMHFAALAAVG-----ESMENPLSYYHNNIAGTLNLLEVMKAHN--VKALVFSSSAT  130 (343)
T ss_pred             -----CCceEEeehhhhccc-----hhhhCchhheehhhhhHHHHHHHHHHcC--CceEEEeccee
Confidence                 699999999975432     2333447788999999999999887653  34788887753

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.35  E-value=2.8e-11  Score=104.93  Aligned_cols=175  Identities=16%  Similarity=0.097  Sum_probs=115.8

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhcC
Q 039897           46 LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYG  125 (272)
Q Consensus        46 lVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (272)
                      |||||+|.||.++++.|.++|++|+++.+.                           ..+|+++.+++.++++.     .
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------------~~~Dl~~~~~l~~~~~~-----~   48 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------------KELDLTRQADVEAFFAK-----E   48 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------------ccCCCCCHHHHHHHHhc-----c
Confidence            699999999999999999999988866322                           24799999888887765     2


Q ss_pred             CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--------------
Q 039897          126 KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--------------  191 (272)
Q Consensus       126 ~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--------------  191 (272)
                      ++|+|||+|+......    ...++....+++|+.++.++++++...  .-.++|++||...+...              
T Consensus        49 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~  122 (306)
T PLN02725         49 KPTYVILAAAKVGGIH----ANMTYPADFIRENLQIQTNVIDAAYRH--GVKKLLFLGSSCIYPKFAPQPIPETALLTGP  122 (306)
T ss_pred             CCCEEEEeeeeecccc----hhhhCcHHHHHHHhHHHHHHHHHHHHc--CCCeEEEeCceeecCCCCCCCCCHHHhccCC
Confidence            6899999999742110    011122456889999999999998753  22589999996433210              


Q ss_pred             --h----h--HHHHHH----HHh-hCCeEEEEEecccccCCCCCC-----CCCHHHHHh--------------hccCCCC
Q 039897          192 --P----E--ARGLAL----QLV-ERGIRVNGVAPGPIWTPLIPS-----SFSEEESAQ--------------FGSEVPM  239 (272)
Q Consensus       192 --~----~--~~~la~----e~~-~~gi~vn~i~PG~v~t~~~~~-----~~~~~~~~~--------------~~~~~~~  239 (272)
                        +    .  +|.++.    ++. ..++++..+.|+.+..+....     ..-......              +....+.
T Consensus       123 ~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~  202 (306)
T PLN02725        123 PEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPL  202 (306)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCee
Confidence              1    1  233332    232 358999999999987775321     011111111              1112223


Q ss_pred             CCCCCccchhhhhhhhhcc
Q 039897          240 KRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~  258 (272)
                      ..+...+|++++++.++..
T Consensus       203 ~~~i~v~Dv~~~~~~~~~~  221 (306)
T PLN02725        203 REFLHVDDLADAVVFLMRR  221 (306)
T ss_pred             eccccHHHHHHHHHHHHhc
Confidence            3567889999999998864

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.33  E-value=5.7e-11  Score=95.34  Aligned_cols=166  Identities=18%  Similarity=0.106  Sum_probs=111.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      |+|+||+|.+|+.++++|+++|++|+++.|++++.+.               ..++..+.+|+.|++++.+.++      
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------------~~~~~~~~~d~~d~~~~~~al~------   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------------SPGVEIIQGDLFDPDSVKAALK------   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------------CTTEEEEESCTTCHHHHHHHHT------
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------------ccccccceeeehhhhhhhhhhh------
Confidence            7999999999999999999999999999998654321               4578899999999977777665      


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----------
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----------  193 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----------  193 (272)
                       +.|+||+++|....         +         ....-.+++++...  .-.+++++|+.......+.           
T Consensus        60 -~~d~vi~~~~~~~~---------~---------~~~~~~~~~a~~~~--~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~  118 (183)
T PF13460_consen   60 -GADAVIHAAGPPPK---------D---------VDAAKNIIEAAKKA--GVKRVVYLSSAGVYRDPPGLFSDEDKPIFP  118 (183)
T ss_dssp             -TSSEEEECCHSTTT---------H---------HHHHHHHHHHHHHT--TSSEEEEEEETTGTTTCTSEEEGGTCGGGH
T ss_pred             -hcchhhhhhhhhcc---------c---------cccccccccccccc--ccccceeeeccccCCCCCcccccccccchh
Confidence             79999999977432         0         22233344444332  2348999998865543222           


Q ss_pred             ----HHHH-HHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 ----ARGL-ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 ----~~~l-a~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                          .+.. -..+.+.+++...+.|+.+..+....   ......  .........+.+|+|.+++.++.
T Consensus       119 ~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~---~~~~~~--~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  119 EYARDKREAEEALRESGLNWTIVRPGWIYGNPSRS---YRLIKE--GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSS---EEEESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcc---eeEEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence                1111 12234579999999999987665221   000000  11112245578899999888764

...

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.33  E-value=1.3e-11  Score=112.31  Aligned_cols=191  Identities=17%  Similarity=0.071  Sum_probs=120.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -..++||||||+|.||++++++|+++|++|++++|......   .....+.     ...++.++..|+.+..     +  
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~---~~~~~~~-----~~~~~~~~~~Di~~~~-----~--  182 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRK---ENLVHLF-----GNPRFELIRHDVVEPI-----L--  182 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccH---hHhhhhc-----cCCceEEEECcccccc-----c--
Confidence            44578999999999999999999999999999987532211   1111110     1235677888886532     1  


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--------  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--------  191 (272)
                           .++|+|||+|+......  ..   .+-...+++|+.++.++++++...   +.++|++||...+...        
T Consensus       183 -----~~~D~ViHlAa~~~~~~--~~---~~p~~~~~~Nv~gT~nLleaa~~~---g~r~V~~SS~~VYg~~~~~p~~E~  249 (436)
T PLN02166        183 -----LEVDQIYHLACPASPVH--YK---YNPVKTIKTNVMGTLNMLGLAKRV---GARFLLTSTSEVYGDPLEHPQKET  249 (436)
T ss_pred             -----cCCCEEEECceeccchh--hc---cCHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECcHHHhCCCCCCCCCcc
Confidence                 25899999998743211  11   123577899999999999988754   3489999997533210        


Q ss_pred             ------hh--------HH----HHHHHHh-hCCeEEEEEecccccCCCCCC---CCCHHHHHhhc---------cCCCCC
Q 039897          192 ------PE--------AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPS---SFSEEESAQFG---------SEVPMK  240 (272)
Q Consensus       192 ------~~--------~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~---~~~~~~~~~~~---------~~~~~~  240 (272)
                            +.        +|    .+..++. ..++.+..+.|+.+..+....   ..-........         ......
T Consensus       250 ~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~r  329 (436)
T PLN02166        250 YWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTR  329 (436)
T ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEE
Confidence                  10        23    2333333 358999999998887764211   11111111111         111223


Q ss_pred             CCCCccchhhhhhhhhcc
Q 039897          241 RAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~  258 (272)
                      .+...+|+++++..++..
T Consensus       330 dfi~V~Dva~ai~~~~~~  347 (436)
T PLN02166        330 SFQYVSDLVDGLVALMEG  347 (436)
T ss_pred             eeEEHHHHHHHHHHHHhc
Confidence            467889999999888753

>PLN02996 fatty acyl-CoA reductase

Probab=99.31  E-value=1.1e-10  Score=107.85  Aligned_cols=134  Identities=16%  Similarity=0.183  Sum_probs=89.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecccchhhhHHHHHHHH---------HHhhh-----cCCCCc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA---TVAFTYVKSQEEKDAQETLEIL---------REAKT-----SDAKDP  100 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~---~v~i~~r~~~~~~~~~~~~~~~---------~~~~~-----~~~~~~  100 (272)
                      .-++||+|+||||+|.||..+++.|++.+.   +|+++.|........+....++         .+...     ....++
T Consensus         7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv   86 (491)
T PLN02996          7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV   86 (491)
T ss_pred             HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence            348999999999999999999999997653   5788887654322222211111         11000     012578


Q ss_pred             eEEeccCCCh-------HHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc
Q 039897          101 MAISADLGFD-------ENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM  173 (272)
Q Consensus       101 ~~~~~D~~~~-------~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  173 (272)
                      .++..|++.+       +.++++++       .+|+|||+|+....    .    ++....+++|+.|+.++++.+... 
T Consensus        87 ~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~----~----~~~~~~~~~Nv~gt~~ll~~a~~~-  150 (491)
T PLN02996         87 TPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF----D----ERYDVALGINTLGALNVLNFAKKC-  150 (491)
T ss_pred             EEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC----c----CCHHHHHHHHHHHHHHHHHHHHhc-
Confidence            8999999843       32334332       59999999997531    1    235678899999999999988653 


Q ss_pred             ccCCeEEEecCCCC
Q 039897          174 NEGSAIINTTSVEP  187 (272)
Q Consensus       174 ~~~g~iv~vsS~~~  187 (272)
                      ..-.++|++||...
T Consensus       151 ~~~k~~V~vST~~v  164 (491)
T PLN02996        151 VKVKMLLHVSTAYV  164 (491)
T ss_pred             CCCCeEEEEeeeEE
Confidence            12248999998654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.27  E-value=1.6e-10  Score=99.45  Aligned_cols=179  Identities=9%  Similarity=-0.026  Sum_probs=109.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|.||++++++|.++|++|.++.|++++.                ...++..+.+|++|++++.+.++.. +.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~----------------~~~~~~~~~~d~~d~~~l~~a~~~~-~~   63 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS----------------AGPNEKHVKFDWLDEDTWDNPFSSD-DG   63 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc----------------cCCCCccccccCCCHHHHHHHHhcc-cC
Confidence            489999999999999999999999999999986532                1124556789999999999888643 33


Q ss_pred             cCC-ccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHHHHHh
Q 039897          124 YGK-IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLALQLV  202 (272)
Q Consensus       124 ~g~-ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la~e~~  202 (272)
                      +.+ +|.++++++....       ..+           ...+++.++...  .-.+||++||.....+.+........+.
T Consensus        64 ~~g~~d~v~~~~~~~~~-------~~~-----------~~~~~i~aa~~~--gv~~~V~~Ss~~~~~~~~~~~~~~~~l~  123 (285)
T TIGR03649        64 MEPEISAVYLVAPPIPD-------LAP-----------PMIKFIDFARSK--GVRRFVLLSASIIEKGGPAMGQVHAHLD  123 (285)
T ss_pred             cCCceeEEEEeCCCCCC-------hhH-----------HHHHHHHHHHHc--CCCEEEEeeccccCCCCchHHHHHHHHH
Confidence            345 9999998764210       001           112333333221  1248999998654333222222222333


Q ss_pred             h-CCeEEEEEecccccCCCCCCCCCHHHHH--hhcc--CCCCCCCCCccchhhhhhhhhccC
Q 039897          203 E-RGIRVNGVAPGPIWTPLIPSSFSEEESA--QFGS--EVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       203 ~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      . .|+....+.|+++...+...........  .+..  .-....+.+++|+|+++..++..+
T Consensus       124 ~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~  185 (285)
T TIGR03649       124 SLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDK  185 (285)
T ss_pred             hccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCC
Confidence            4 3899999999977654421110000000  0110  111123568899999999988754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.27  E-value=2.6e-10  Score=97.10  Aligned_cols=168  Identities=17%  Similarity=0.208  Sum_probs=131.3

Q ss_pred             CcEEEEEcC-CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGG-DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGa-s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ..+|||.|. +.-|++.+|..|-++|+-|+++..+.++...++..          ....+.....|..++.++...+.++
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e----------~~~dI~~L~ld~~~~~~~~~~l~~f   72 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE----------DRPDIRPLWLDDSDPSSIHASLSRF   72 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc----------cCCCCCCcccCCCCCcchHHHHHHH
Confidence            568999995 78999999999999999999998874433222211          3555788888988888888887777


Q ss_pred             HHhcC--------------CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----CCeEEEe
Q 039897          121 VNAYG--------------KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINT  182 (272)
Q Consensus       121 ~~~~g--------------~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~g~iv~v  182 (272)
                      .+...              .+..||.......+.+|++.++.+.|.+.++.|+..++.+++.++|+|+.    +.+||++
T Consensus        73 ~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~  152 (299)
T PF08643_consen   73 ASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILF  152 (299)
T ss_pred             HHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE
Confidence            76544              45677777776667789999999999999999999999999999999976    4566655


Q ss_pred             c-CCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCC
Q 039897          183 T-SVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTP  219 (272)
Q Consensus       183 s-S~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~  219 (272)
                      . |.......|.              ...|++|+.+.+|.|..+..|.++-.
T Consensus       153 ~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  153 NPSISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             eCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            4 4433323222              68899999999999999999988655

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.27  E-value=1.1e-10  Score=101.31  Aligned_cols=139  Identities=15%  Similarity=0.090  Sum_probs=97.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|-||++++++|.++| +|++++|..                        ..+..|++|.+.+.++++..   
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~------------------------~~~~~Dl~d~~~~~~~~~~~---   53 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHS------------------------TDYCGDFSNPEGVAETVRKI---   53 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEecccc------------------------ccccCCCCCHHHHHHHHHhc---
Confidence            69999999999999999999999 788877641                        02457999999888887742   


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---hh-------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---PE-------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---~~-------  193 (272)
                        ++|+|||+|+.....     ...++-...+++|+.++.++++++...   +.++|++||...+.+.   +.       
T Consensus        54 --~~D~Vih~Aa~~~~~-----~~~~~~~~~~~~N~~~~~~l~~aa~~~---g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~  123 (299)
T PRK09987         54 --RPDVIVNAAAHTAVD-----KAESEPEFAQLLNATSVEAIAKAANEV---GAWVVHYSTDYVFPGTGDIPWQETDATA  123 (299)
T ss_pred             --CCCEEEECCccCCcc-----hhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEccceEECCCCCCCcCCCCCCC
Confidence              589999999975321     111223556789999999999988753   3489999986433221   00       


Q ss_pred             -------HHHHHHHHhh-CCeEEEEEecccccCCC
Q 039897          194 -------ARGLALQLVE-RGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       194 -------~~~la~e~~~-~gi~vn~i~PG~v~t~~  220 (272)
                             +|..+.++.. ...+...+.|+.+..+.
T Consensus       124 P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~  158 (299)
T PRK09987        124 PLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGK  158 (299)
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCEEEEecceecCCC
Confidence                   4444444322 22345677788776653

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.26  E-value=2.3e-11  Score=101.03  Aligned_cols=101  Identities=17%  Similarity=0.195  Sum_probs=78.5

Q ss_pred             EEEEEcC-CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGG-DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGa-s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +=.||.. +||||+++|++|+++|++|+++++..    .+       .     ..   ....+|+++.+++.++++.+.+
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~----~l-------~-----~~---~~~~~Dv~d~~s~~~l~~~v~~   76 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR----AL-------K-----PE---PHPNLSIREIETTKDLLITLKE   76 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh----hc-------c-----cc---cCCcceeecHHHHHHHHHHHHH
Confidence            4456664 67999999999999999999987531    00       0     00   1246899999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTR  167 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  167 (272)
                      .++++|++|||||+. ...++.+.+.++|++++..   +.+++.+
T Consensus        77 ~~g~iDiLVnnAgv~-d~~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        77 LVQEHDILIHSMAVS-DYTPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             HcCCCCEEEECCEec-cccchhhCCHHHHhhhcch---hhhhccc
Confidence            999999999999985 4578889999999987544   5555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.25  E-value=2.5e-10  Score=98.25  Aligned_cols=186  Identities=17%  Similarity=0.101  Sum_probs=109.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      ||||||+|.||.++++.|+++|++|++++|+........             .   . ...|+.. .       .+.+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------~---~-~~~~~~~-~-------~~~~~~   55 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-------------W---E-GYKPWAP-L-------AESEAL   55 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-------------c---e-eeecccc-c-------chhhhc
Confidence            689999999999999999999999999999755432110             0   0 0112211 1       112234


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC----------h--
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS----------P--  192 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~----------~--  192 (272)
                      .++|+|||+|+.....   .....+.....+++|+.++.++++++...-.+...+++.|+...+...          +  
T Consensus        56 ~~~D~Vvh~a~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~  132 (292)
T TIGR01777        56 EGADAVINLAGEPIAD---KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAG  132 (292)
T ss_pred             CCCCEEEECCCCCccc---ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCC
Confidence            5799999999974321   123445567788999999999999886541111245555553211110          0  


Q ss_pred             --h---HH----HHHHHHhhCCeEEEEEecccccCCCCCCCCCH--HHHHh-----hccCCCCCCCCCccchhhhhhhhh
Q 039897          193 --E---AR----GLALQLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQ-----FGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       193 --~---~~----~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                        .   .+    .....+.+.++.+..+.|+.+..+.. .....  .....     +........+.+.+|+++++..++
T Consensus       133 ~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l  211 (292)
T TIGR01777       133 DDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG-GALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFAL  211 (292)
T ss_pred             CChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc-chhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHh
Confidence              0   11    11112234589999999999976632 11110  00110     111122235578899999999998


Q ss_pred             ccC
Q 039897          257 CNH  259 (272)
Q Consensus       257 s~~  259 (272)
                      ...
T Consensus       212 ~~~  214 (292)
T TIGR01777       212 ENA  214 (292)
T ss_pred             cCc
Confidence            653

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.23  E-value=1.5e-10  Score=97.81  Aligned_cols=159  Identities=14%  Similarity=0.124  Sum_probs=88.1

Q ss_pred             EEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhh---h---cCCCCceEEeccCCChH-HH-HHH
Q 039897           47 VTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAK---T---SDAKDPMAISADLGFDE-NC-KRV  116 (272)
Q Consensus        47 VtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~D~~~~~-~~-~~~  116 (272)
                      ||||||-||..+..+|++.+.  +|+.+.|........++..+.+.+..   .   ....++.++..|++++. .+ .+.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  89999887544333333322221110   0   12678999999999864 11 122


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----  192 (272)
                      .+.+.   ..+|+|||||+......+.        .+..++|+.|+.++++.+...-.  .+++++||........    
T Consensus        81 ~~~L~---~~v~~IiH~Aa~v~~~~~~--------~~~~~~NV~gt~~ll~la~~~~~--~~~~~iSTa~v~~~~~~~~~  147 (249)
T PF07993_consen   81 YQELA---EEVDVIIHCAASVNFNAPY--------SELRAVNVDGTRNLLRLAAQGKR--KRFHYISTAYVAGSRPGTIE  147 (249)
T ss_dssp             HHHHH---HH--EEEE--SS-SBS-S----------EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS-TTT--
T ss_pred             hhccc---cccceeeecchhhhhcccc--------hhhhhhHHHHHHHHHHHHHhccC--cceEEeccccccCCCCCccc
Confidence            22332   2599999999986544333        33578999999999998874322  3999999932111111    


Q ss_pred             -----h-----------------HHHH----HHHHhhC-CeEEEEEecccccC
Q 039897          193 -----E-----------------ARGL----ALQLVER-GIRVNGVAPGPIWT  218 (272)
Q Consensus       193 -----~-----------------~~~l----a~e~~~~-gi~vn~i~PG~v~t  218 (272)
                           .                 +|..    -.+..+. |+.+..+.||.|..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  148 EKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG  200 (249)
T ss_dssp             SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred             ccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence                 0                 3333    3344444 99999999999866

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.23  E-value=5.8e-11  Score=102.34  Aligned_cols=175  Identities=17%  Similarity=0.123  Sum_probs=111.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      .+|||||++|-||.++.+.|.++|++|+.++|.                            .+|+++.+.+.++++..  
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------------~~dl~d~~~~~~~~~~~--   50 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------------DLDLTDPEAVAKLLEAF--   50 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------------CS-TTSHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------------hcCCCCHHHHHHHHHHh--
Confidence            379999999999999999999999999888553                            77999999999998875  


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---hh------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---PE------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---~~------  193 (272)
                         ++|+|||+|++...     +....+-+..+.+|+.++.++.+.+..   .+.++|++||...+.+.   +.      
T Consensus        51 ---~pd~Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~---~~~~li~~STd~VFdG~~~~~y~E~d~~  119 (286)
T PF04321_consen   51 ---KPDVVINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKE---RGARLIHISTDYVFDGDKGGPYTEDDPP  119 (286)
T ss_dssp             -----SEEEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHH---CT-EEEEEEEGGGS-SSTSSSB-TTS--
T ss_pred             ---CCCeEeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHH---cCCcEEEeeccEEEcCCcccccccCCCC
Confidence               69999999998421     122344567899999999999999875   35699999997554333   11      


Q ss_pred             --------HHHHHHHHhhC-CeEEEEEecccccCCCCCCCCCHHHHHhhcc-------CCCCCCCCCccchhhhhhhhhc
Q 039897          194 --------ARGLALQLVER-GIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-------EVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 --------~~~la~e~~~~-gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~L~s  257 (272)
                              ++..+.+.... .-....+.++++..+.. ..+.......+..       .-........+|+|..+..|+.
T Consensus       120 ~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~  198 (286)
T PF04321_consen  120 NPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSG-RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIE  198 (286)
T ss_dssp             --SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSS-SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCC-CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHH
Confidence                    45555543331 22667788888876621 2222222222211       1112234567899999999886


Q ss_pred             cC
Q 039897          258 NH  259 (272)
Q Consensus       258 ~~  259 (272)
                      ..
T Consensus       199 ~~  200 (286)
T PF04321_consen  199 KN  200 (286)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.17  E-value=3.7e-09  Score=84.42  Aligned_cols=172  Identities=13%  Similarity=0.062  Sum_probs=112.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++++||||+ |+|.++++.|+++|++|++++|+...   .......+.     ...++.++.+|++|++++.++++.+.+
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~---~~~l~~~l~-----~~~~i~~~~~Dv~d~~sv~~~i~~~l~   71 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVK---LENVKREST-----TPESITPLPLDYHDDDALKLAIKSTIE   71 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHH---HHHHHHHhh-----cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            369999998 77788999999999999999987433   222222221     234678889999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc--cCCeEEEecCCCCccCChhHHHHHHH
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN--EGSAIINTTSVEPLWHSPEARGLALQ  200 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~--~~g~iv~vsS~~~~~~~~~~~~la~e  200 (272)
                      .++++|.+|+.+=...                       +-++..++...-.  +.-+++++-......+    +..+..
T Consensus        72 ~~g~id~lv~~vh~~~-----------------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~----~~~~~~  124 (177)
T PRK08309         72 KNGPFDLAVAWIHSSA-----------------------KDALSVVCRELDGSSETYRLFHVLGSAASDP----RIPSEK  124 (177)
T ss_pred             HcCCCeEEEEeccccc-----------------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch----hhhhhh
Confidence            9999999987664421                       2223333322211  1225776654333211    333333


Q ss_pred             HhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccccee
Q 039897          201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV  268 (272)
Q Consensus       201 ~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~  268 (272)
                      ++..+..-.-|..|++...-.                  -|.++=+||++.++.-+......++.|++
T Consensus       125 ~~~~~~~~~~i~lgf~~~~~~------------------~rwlt~~ei~~gv~~~~~~~~~~~~~g~~  174 (177)
T PRK08309        125 IGPARCSYRRVILGFVLEDTY------------------SRWLTHEEISDGVIKAIESDADEHVVGTV  174 (177)
T ss_pred             hhhcCCceEEEEEeEEEeCCc------------------cccCchHHHHHHHHHHHhcCCCeEEEEEe
Confidence            444556667788899866543                  24456678888888877665566776654

>PRK12320 hypothetical protein; Provisional

Probab=99.17  E-value=1.4e-09  Score=103.03  Aligned_cols=171  Identities=15%  Similarity=0.082  Sum_probs=110.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|.||++++++|.++|++|+++++.....                ...++.++.+|+++.. +.+.+      
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------------~~~~ve~v~~Dl~d~~-l~~al------   58 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------------LDPRVDYVCASLRNPV-LQELA------   58 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------------ccCCceEEEccCCCHH-HHHHh------
Confidence            699999999999999999999999999998753210                1235778999999863 33332      


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-ChhHHHHHHHHh
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-SPEARGLALQLV  202 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-~~~~~~la~e~~  202 (272)
                       .++|+|||+|+....       .      ...+|+.++.++++++...   +.++|++||..+... .+....+..   
T Consensus        59 -~~~D~VIHLAa~~~~-------~------~~~vNv~Gt~nLleAA~~~---GvRiV~~SS~~G~~~~~~~aE~ll~---  118 (699)
T PRK12320         59 -GEADAVIHLAPVDTS-------A------PGGVGITGLAHVANAAARA---GARLLFVSQAAGRPELYRQAETLVS---  118 (699)
T ss_pred             -cCCCEEEEcCccCcc-------c------hhhHHHHHHHHHHHHHHHc---CCeEEEEECCCCCCccccHHHHHHH---
Confidence             368999999986311       0      1247999999999988642   347999998743211 122333222   


Q ss_pred             hCCeEEEEEecccccCCCCCCCCCHHHHHhh----ccCCCCCCCCCccchhhhhhhhhccC
Q 039897          203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQF----GSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       203 ~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      ..++.+..+.+..+..+....... .....+    ....+. .+.+.+|++++++.+++..
T Consensus       119 ~~~~p~~ILR~~nVYGp~~~~~~~-r~I~~~l~~~~~~~pI-~vIyVdDvv~alv~al~~~  177 (699)
T PRK12320        119 TGWAPSLVIRIAPPVGRQLDWMVC-RTVATLLRSKVSARPI-RVLHLDDLVRFLVLALNTD  177 (699)
T ss_pred             hcCCCEEEEeCceecCCCCcccHh-HHHHHHHHHHHcCCce-EEEEHHHHHHHHHHHHhCC
Confidence            245778888888887763221111 111111    111111 1248899999998887643

>PLN00016 RNA-binding protein; Provisional

Probab=99.15  E-value=1.8e-09  Score=96.77  Aligned_cols=198  Identities=15%  Similarity=0.124  Sum_probs=115.7

Q ss_pred             CCCCCCcEEEEE----cCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHH-HHHHHHhhhcCCCCceEEeccCCChH
Q 039897           37 SNKLRGKVALVT----GGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQET-LEILREAKTSDAKDPMAISADLGFDE  111 (272)
Q Consensus        37 ~~~l~~k~vlVt----Gas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (272)
                      ......++||||    ||+|.||..++++|+++|++|++++|+......+... ...+.+.   ...++.++.+|+++  
T Consensus        47 ~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l---~~~~v~~v~~D~~d--  121 (378)
T PLN00016         47 AAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL---SSAGVKTVWGDPAD--  121 (378)
T ss_pred             hcccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh---hhcCceEEEecHHH--
Confidence            344556889999    9999999999999999999999999985432211100 0000000   12347788888865  


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC
Q 039897          112 NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS  191 (272)
Q Consensus       112 ~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~  191 (272)
                       +.+++.     ..++|+|||+++..                     ..+...+++++...  .-.++|++||...+...
T Consensus       122 -~~~~~~-----~~~~d~Vi~~~~~~---------------------~~~~~~ll~aa~~~--gvkr~V~~SS~~vyg~~  172 (378)
T PLN00016        122 -VKSKVA-----GAGFDVVYDNNGKD---------------------LDEVEPVADWAKSP--GLKQFLFCSSAGVYKKS  172 (378)
T ss_pred             -HHhhhc-----cCCccEEEeCCCCC---------------------HHHHHHHHHHHHHc--CCCEEEEEccHhhcCCC
Confidence             333321     23699999986531                     11233444544321  12489999997554321


Q ss_pred             h---h----------HHHHHHH-HhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccC--C-------CCCCCCCccch
Q 039897          192 P---E----------ARGLALQ-LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE--V-------PMKRAGQPIEV  248 (272)
Q Consensus       192 ~---~----------~~~la~e-~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dv  248 (272)
                      .   .          .+..+.. +...++.+..+.|+.+..+.................  .       ....+.+.+|+
T Consensus       173 ~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dv  252 (378)
T PLN00016        173 DEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDL  252 (378)
T ss_pred             CCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHH
Confidence            1   1          2333332 334689999999999987754321111111111111  1       11235678999


Q ss_pred             hhhhhhhhccCCCCcccceeecc
Q 039897          249 APCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      |++++.++...   ...|+++++
T Consensus       253 a~ai~~~l~~~---~~~~~~yni  272 (378)
T PLN00016        253 ASMFALVVGNP---KAAGQIFNI  272 (378)
T ss_pred             HHHHHHHhcCc---cccCCEEEe
Confidence            99999988653   234566654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.14  E-value=1.7e-09  Score=91.41  Aligned_cols=172  Identities=15%  Similarity=0.105  Sum_probs=116.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      +||||++|-+|.+|++.|. .+++|+.+++.                            .+|++|.+.+.+++.+.    
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~----------------------------~~Ditd~~~v~~~i~~~----   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRA----------------------------ELDITDPDAVLEVIRET----   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCc----------------------------cccccChHHHHHHHHhh----
Confidence            9999999999999999998 77899988774                            28999999999999875    


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----------
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----------  193 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----------  193 (272)
                       ++|+|||+|++...     +....+-+..+.+|..|+.++.+++..   -+..+|++|+-..+.+..+           
T Consensus        50 -~PDvVIn~AAyt~v-----D~aE~~~e~A~~vNa~~~~~lA~aa~~---~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P  120 (281)
T COG1091          50 -RPDVVINAAAYTAV-----DKAESEPELAFAVNATGAENLARAAAE---VGARLVHISTDYVFDGEKGGPYKETDTPNP  120 (281)
T ss_pred             -CCCEEEECcccccc-----ccccCCHHHHHHhHHHHHHHHHHHHHH---hCCeEEEeecceEecCCCCCCCCCCCCCCC
Confidence             79999999998432     122333577899999999999999864   3568999998654433321           


Q ss_pred             ------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHhh-------ccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQF-------GSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                            ++.+..+... .+-+...+...++....- ..+..-.....       .-.=+.+......|+|+++..|+...
T Consensus       121 ~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~  199 (281)
T COG1091         121 LNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKE  199 (281)
T ss_pred             hhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcc
Confidence                  4444444432 223344455555543321 11111111111       11223455667899999999988765

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.14  E-value=3.4e-10  Score=94.04  Aligned_cols=193  Identities=16%  Similarity=0.139  Sum_probs=127.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +.+.+++|+||||+|.||++|+..|..+|+.|++++............+  +      ...+...+.-|+..     .++
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~--~------~~~~fel~~hdv~~-----pl~   89 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW--I------GHPNFELIRHDVVE-----PLL   89 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh--c------cCcceeEEEeechh-----HHH
Confidence            4466789999999999999999999999999999987533221111111  1      23344555555543     344


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      .       .+|-++|.|....+......     -.+++..|+.++.+.+..+....   .|+++.|+.. .++.|.    
T Consensus        90 ~-------evD~IyhLAapasp~~y~~n-----pvktIktN~igtln~lglakrv~---aR~l~aSTse-VYgdp~~hpq  153 (350)
T KOG1429|consen   90 K-------EVDQIYHLAAPASPPHYKYN-----PVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTSE-VYGDPLVHPQ  153 (350)
T ss_pred             H-------HhhhhhhhccCCCCcccccC-----ccceeeecchhhHHHHHHHHHhC---ceEEEeeccc-ccCCcccCCC
Confidence            3       58888999988655433221     14568899999999999886543   5888888754 333333    


Q ss_pred             -----------------------HHHHHHHHhh-CCeEEEEEecccccCCCC------------CCCCCHHHHHhhccCC
Q 039897          194 -----------------------ARGLALQLVE-RGIRVNGVAPGPIWTPLI------------PSSFSEEESAQFGSEV  237 (272)
Q Consensus       194 -----------------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~------------~~~~~~~~~~~~~~~~  237 (272)
                                             +..|+..|.+ .||.|....+-.+..|..            .+.+..+....+....
T Consensus       154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~  233 (350)
T KOG1429|consen  154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGK  233 (350)
T ss_pred             ccccccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCc
Confidence                                   4566666654 588777666654444422            1122233344566677


Q ss_pred             CCCCCCCccchhhhhhhhhccC
Q 039897          238 PMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       238 ~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      +.+.|....|..+.++.|+..+
T Consensus       234 qtRSF~yvsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  234 QTRSFQYVSDLVEGLLRLMESD  255 (350)
T ss_pred             ceEEEEeHHHHHHHHHHHhcCC
Confidence            7778889999999999998765

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.13  E-value=2.1e-09  Score=93.95  Aligned_cols=165  Identities=16%  Similarity=0.137  Sum_probs=116.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++.++|||||+|-+|++++++|.+++  ..+.+++..+............       ...++.++.+|+.+..++.+.+
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-------~~~~v~~~~~D~~~~~~i~~a~   74 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-------RSGRVTVILGDLLDANSISNAF   74 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-------cCCceeEEecchhhhhhhhhhc
Confidence            357899999999999999999999999  7899998875422111111100       3677889999999988887777


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +       +. .|||+|....+.     .-..+-+..+++|+.|+.+++..+...-.  .++|++||.....+...    
T Consensus        75 ~-------~~-~Vvh~aa~~~~~-----~~~~~~~~~~~vNV~gT~nvi~~c~~~~v--~~lIYtSs~~Vvf~g~~~~n~  139 (361)
T KOG1430|consen   75 Q-------GA-VVVHCAASPVPD-----FVENDRDLAMRVNVNGTLNVIEACKELGV--KRLIYTSSAYVVFGGEPIING  139 (361)
T ss_pred             c-------Cc-eEEEeccccCcc-----ccccchhhheeecchhHHHHHHHHHHhCC--CEEEEecCceEEeCCeecccC
Confidence            5       56 777777653321     22224577899999999999999987543  48999999764433211    


Q ss_pred             ----------------HHHHHHHHhh-----CCeEEEEEecccccCCCCCCCCC
Q 039897          194 ----------------ARGLALQLVE-----RGIRVNGVAPGPIWTPLIPSSFS  226 (272)
Q Consensus       194 ----------------~~~la~e~~~-----~gi~vn~i~PG~v~t~~~~~~~~  226 (272)
                                      +|..|..+-.     .+..-.++.|-.|..+..+...+
T Consensus       140 ~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~  193 (361)
T KOG1430|consen  140 DESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLP  193 (361)
T ss_pred             CCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccH
Confidence                            5555555432     34778889998888887655443

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.09  E-value=4.3e-08  Score=75.20  Aligned_cols=203  Identities=14%  Similarity=0.189  Sum_probs=134.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +-.+|+|.||-|.+|.++++.|-.++|-|.-++....+.                 ...-+.+..|-+=-++-+..+.++
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~-----------------Ad~sI~V~~~~swtEQe~~v~~~v   64 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ-----------------ADSSILVDGNKSWTEQEQSVLEQV   64 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc-----------------ccceEEecCCcchhHHHHHHHHHH
Confidence            346899999999999999999999999998888763321                 111122333333345555566666


Q ss_pred             HHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          121 VNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                      -+..  .++|.|++.||.+.....-..--...-+-+..-.++....-.+....++|.+|-+-+.+..+...+.|+     
T Consensus        65 g~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYG  144 (236)
T KOG4022|consen   65 GSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYG  144 (236)
T ss_pred             HHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchh
Confidence            5544  379999999998753211101011222344555566666666666677788888888888887777776     


Q ss_pred             -----HHHHHHHHhh------CCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----ARGLALQLVE------RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----~~~la~e~~~------~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                           +..|...++.      .|--+.+|.|=..+|||.++++++.+...         ....+.+++..+....+. ++
T Consensus       145 MAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfss---------WTPL~fi~e~flkWtt~~-~R  214 (236)
T KOG4022|consen  145 MAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSS---------WTPLSFISEHFLKWTTET-SR  214 (236)
T ss_pred             HHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccC---------cccHHHHHHHHHHHhccC-CC
Confidence                 3344444443      46778889999999999999887665332         234578888877776655 67


Q ss_pred             cccceeec
Q 039897          263 YITGQVLH  270 (272)
Q Consensus       263 ~~tG~~i~  270 (272)
                      .-+|..+.
T Consensus       215 PssGsLlq  222 (236)
T KOG4022|consen  215 PSSGSLLQ  222 (236)
T ss_pred             CCCCceEE
Confidence            77777654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.08  E-value=3.7e-09  Score=91.77  Aligned_cols=165  Identities=18%  Similarity=0.166  Sum_probs=113.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhh---HHHHHHHHHHhhhcCCCCceEEeccCCChH--HHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKD---AQETLEILREAKTSDAKDPMAISADLGFDE--NCKRV  116 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~  116 (272)
                      +++++|||||-||..+..+|+.+ .++|+...|.+.+...   +.+.+............+++.+..|++.+.  --+..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999998888766 4589988887664333   333333222333347889999999998432  11122


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---  193 (272)
                      .+.+.   +.+|.+|||++......|        ..+....|+.|+..+++.+.--  +...+.++||++.......   
T Consensus        81 ~~~La---~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~~~~~  147 (382)
T COG3320          81 WQELA---ENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEYYSNF  147 (382)
T ss_pred             HHHHh---hhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccccCCC
Confidence            22222   359999999998654432        2455789999999999977542  3345889998754322111   


Q ss_pred             ---------------------------HHHHHHHHhhCCeEEEEEecccccCCC
Q 039897          194 ---------------------------ARGLALQLVERGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       194 ---------------------------~~~la~e~~~~gi~vn~i~PG~v~t~~  220 (272)
                                                 +..+.++-.+.|+++..+.||++-.+-
T Consensus       148 ~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds  201 (382)
T COG3320         148 TVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDS  201 (382)
T ss_pred             ccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccC
Confidence                                       567777777889999999999995543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.05  E-value=8e-09  Score=96.83  Aligned_cols=134  Identities=12%  Similarity=0.158  Sum_probs=91.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecccchhhhHHHHHHHH---------HHhhhc-----CCCCc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA---TVAFTYVKSQEEKDAQETLEIL---------REAKTS-----DAKDP  100 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~---~v~i~~r~~~~~~~~~~~~~~~---------~~~~~~-----~~~~~  100 (272)
                      .-++||+|+||||+|-||..+++.|++.+.   +|+++.|........+...+++         ++....     ...++
T Consensus       115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki  194 (605)
T PLN02503        115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL  194 (605)
T ss_pred             hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence            458999999999999999999999998764   6788878644332222221121         111100     13578


Q ss_pred             eEEeccCCChH------HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc
Q 039897          101 MAISADLGFDE------NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN  174 (272)
Q Consensus       101 ~~~~~D~~~~~------~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  174 (272)
                      .++..|++++.      ..+.+.       ..+|+|||+|+....    .    ++.+..+++|+.|+.++++.+... +
T Consensus       195 ~~v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~f----~----~~~~~a~~vNV~GT~nLLelA~~~-~  258 (605)
T PLN02503        195 VPVVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTTF----D----ERYDVAIDINTRGPCHLMSFAKKC-K  258 (605)
T ss_pred             EEEEeeCCCcccCCCHHHHHHHH-------hcCCEEEECcccccc----c----cCHHHHHHHHHHHHHHHHHHHHHc-C
Confidence            89999999862      333322       259999999987531    1    345678899999999999988653 2


Q ss_pred             cCCeEEEecCCCC
Q 039897          175 EGSAIINTTSVEP  187 (272)
Q Consensus       175 ~~g~iv~vsS~~~  187 (272)
                      .-.++|++||...
T Consensus       259 ~lk~fV~vSTayV  271 (605)
T PLN02503        259 KLKLFLQVSTAYV  271 (605)
T ss_pred             CCCeEEEccCcee
Confidence            2247999998643

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.03  E-value=7.6e-09  Score=86.09  Aligned_cols=185  Identities=16%  Similarity=0.139  Sum_probs=106.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      |+||||+|-||++++..|.+.|+.|+++.|+.......             ....+.       ..+.+.....      
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~-------------~~~~v~-------~~~~~~~~~~------   54 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN-------------LHPNVT-------LWEGLADALT------   54 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh-------------cCcccc-------ccchhhhccc------
Confidence            68999999999999999999999999999986542211             111111       1111111111      


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----------
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----------  193 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----------  193 (272)
                      ..+|+|||.||.....+.   .+.+.=+..++.=+..+-.|...+.. +.++.++..-+|..++++...           
T Consensus        55 ~~~DavINLAG~~I~~rr---Wt~~~K~~i~~SRi~~T~~L~e~I~~-~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g  130 (297)
T COG1090          55 LGIDAVINLAGEPIAERR---WTEKQKEEIRQSRINTTEKLVELIAA-SETKPKVLISASAVGYYGHSGDRVVTEESPPG  130 (297)
T ss_pred             CCCCEEEECCCCcccccc---CCHHHHHHHHHHHhHHHHHHHHHHHh-ccCCCcEEEecceEEEecCCCceeeecCCCCC
Confidence            169999999997432221   23333334444334444444443332 233455655666667766554           


Q ss_pred             ---HHHHHHHHh-------hCCeEEEEEecccccCC---CCCCCCCHHHH---HhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 ---ARGLALQLV-------ERGIRVNGVAPGPIWTP---LIPSSFSEEES---AQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 ---~~~la~e~~-------~~gi~vn~i~PG~v~t~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                         ...++.+|.       ..|+||..+.-|.|..+   ++.+..+....   -.+...-+.....+.+|+.+++.|++.
T Consensus       131 ~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~  210 (297)
T COG1090         131 DDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLE  210 (297)
T ss_pred             CChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHh
Confidence               344444443       34899999999998663   22121111110   112222223334578999999999998


Q ss_pred             cC
Q 039897          258 NH  259 (272)
Q Consensus       258 ~~  259 (272)
                      +.
T Consensus       211 ~~  212 (297)
T COG1090         211 NE  212 (297)
T ss_pred             Cc
Confidence            64

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.02  E-value=3.5e-08  Score=102.17  Aligned_cols=206  Identities=14%  Similarity=0.059  Sum_probs=124.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC----CeEEEEecccchhhhHHHHHHHHHHhh---hcCCCCceEEeccCCChHH-
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEG----ATVAFTYVKSQEEKDAQETLEILREAK---TSDAKDPMAISADLGFDEN-  112 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G----~~v~i~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~-  112 (272)
                      ..++|+|||++|.||..++++|+++|    ++|+.+.|............+.....+   .....++.++..|++++.- 
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999987    788888886544333322222111100   0012368889999986420 


Q ss_pred             -HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-
Q 039897          113 -CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-  190 (272)
Q Consensus       113 -~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-  190 (272)
                       -....+.+.   ..+|++||||+.....     .+.   ......|+.|+.++++.+...  +..+++++||.+.+.. 
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~~-----~~~---~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~ 1116 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHWV-----YPY---SKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTE 1116 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecCc-----cCH---HHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcc
Confidence             011122222   3699999999975321     222   334567999999999988643  2348999999644311 


Q ss_pred             ---------------------------------Chh----HHHHHHHHhhCCeEEEEEecccccCCCCCCC-CCHHHHHh
Q 039897          191 ---------------------------------SPE----ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-FSEEESAQ  232 (272)
Q Consensus       191 ---------------------------------~~~----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~  232 (272)
                                                       +..    +..+..++.+.|+.+..+.||.|..+..... ...+....
T Consensus      1117 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~ 1196 (1389)
T TIGR03443      1117 YYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLR 1196 (1389)
T ss_pred             cccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHH
Confidence                                             001    2333444455699999999999976532211 11111111


Q ss_pred             h------ccCCC----CCCCCCccchhhhhhhhhccC
Q 039897          233 F------GSEVP----MKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       233 ~------~~~~~----~~~~~~~~dva~~~~~L~s~~  259 (272)
                      +      ....|    ...+...++++++++.++...
T Consensus      1197 ~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~ 1233 (1389)
T TIGR03443      1197 MLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNP 1233 (1389)
T ss_pred             HHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCC
Confidence            1      11111    233567889999999887543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.94  E-value=1.7e-08  Score=92.53  Aligned_cols=141  Identities=20%  Similarity=0.221  Sum_probs=97.7

Q ss_pred             EEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhcCC
Q 039897           47 VTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGK  126 (272)
Q Consensus        47 VtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (272)
                      |+||++|+|.++++.|...|+.|+.+.+.....                                        ......+
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~----------------------------------------~~~~~~~   82 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW----------------------------------------AAGWGDR   82 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc----------------------------------------ccCcCCc
Confidence            678889999999999999999999875532100                                        0000123


Q ss_pred             ccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----------HH
Q 039897          127 IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----------AR  195 (272)
Q Consensus       127 ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----------~~  195 (272)
                      ++.+|+-+...        .+.++        +.+.+.+++..++.|.++|+||+++|.......+.           ++
T Consensus        83 ~~~~~~d~~~~--------~~~~~--------l~~~~~~~~~~l~~l~~~griv~i~s~~~~~~~~~~~~akaal~gl~r  146 (450)
T PRK08261         83 FGALVFDATGI--------TDPAD--------LKALYEFFHPVLRSLAPCGRVVVLGRPPEAAADPAAAAAQRALEGFTR  146 (450)
T ss_pred             ccEEEEECCCC--------CCHHH--------HHHHHHHHHHHHHhccCCCEEEEEccccccCCchHHHHHHHHHHHHHH
Confidence            44333322110        01222        22445677778888888899999999876444332           78


Q ss_pred             HHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       196 ~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++.|+ +++|++|.|.|+.                           ..+++++..+.|++++. +.+++|+++.++
T Consensus       147 sla~E~-~~gi~v~~i~~~~---------------------------~~~~~~~~~~~~l~s~~-~a~~~g~~i~~~  194 (450)
T PRK08261        147 SLGKEL-RRGATAQLVYVAP---------------------------GAEAGLESTLRFFLSPR-SAYVSGQVVRVG  194 (450)
T ss_pred             HHHHHh-hcCCEEEEEecCC---------------------------CCHHHHHHHHHHhcCCc-cCCccCcEEEec
Confidence            999999 7899999998874                           24678888899999887 889999998764

>PLN02778 3,5-epimerase/4-reductase

Probab=98.93  E-value=1.6e-08  Score=87.71  Aligned_cols=101  Identities=16%  Similarity=0.160  Sum_probs=69.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||+|.||++++++|.++|++|+...                               .|+++.+.+...++.   
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------------~~~~~~~~v~~~l~~---   55 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------------GRLENRASLEADIDA---   55 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------------CccCCHHHHHHHHHh---
Confidence            5899999999999999999999999986431                               123333444443332   


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                        .++|+|||+|+......  .+...++-...+++|+.++.++++++...   +-+.+++||
T Consensus        56 --~~~D~ViH~Aa~~~~~~--~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~---gv~~v~~sS  110 (298)
T PLN02778         56 --VKPTHVFNAAGVTGRPN--VDWCESHKVETIRANVVGTLTLADVCRER---GLVLTNYAT  110 (298)
T ss_pred             --cCCCEEEECCcccCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEec
Confidence              26999999999753211  11122344678999999999999998654   223455554

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.86  E-value=1.3e-08  Score=91.15  Aligned_cols=79  Identities=27%  Similarity=0.270  Sum_probs=61.5

Q ss_pred             CCCCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCce
Q 039897           38 NKLRGKVALVTGG----------------DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM  101 (272)
Q Consensus        38 ~~l~~k~vlVtGa----------------s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (272)
                      .+|+||++|||||                +|++|.++|++|+++|++|++++++.. .   .            ...  .
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~---~------------~~~--~  245 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-L---P------------TPA--G  245 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-c---c------------CCC--C
Confidence            4689999999999                555999999999999999999987631 1   0            111  1


Q ss_pred             EEeccCCChHHHHHHHHHHHHhcCCccEEEEccccc
Q 039897          102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       102 ~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      ...+|+++.+++.+.+.   +.++.+|++|||||+.
T Consensus       246 ~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        246 VKRIDVESAQEMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             cEEEccCCHHHHHHHHH---HhcCCCCEEEEccccc
Confidence            34679998877666655   4578899999999985

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.85  E-value=1.2e-08  Score=84.94  Aligned_cols=133  Identities=20%  Similarity=0.115  Sum_probs=99.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+|++||||-+|--|.-+|+.|++.|+.|..+.|+.+......-   .+.+.......++..+.+|++|...+.++++.+
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri---~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI---HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc---eeccccccCCceeEEEeccccchHHHHHHHHhc
Confidence            36899999999999999999999999999999997544322110   111111114555889999999999999999886


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                           .+|-+.|.|+-..-.     .+.+.-..+.+++..|+.+++.++.-+-++..++..-||..
T Consensus        78 -----~PdEIYNLaAQS~V~-----vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE  133 (345)
T COG1089          78 -----QPDEIYNLAAQSHVG-----VSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE  133 (345)
T ss_pred             -----Cchhheecccccccc-----ccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHH
Confidence                 699999988865432     34444567789999999999998866544456777777753

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=8.1e-08  Score=82.85  Aligned_cols=87  Identities=28%  Similarity=0.360  Sum_probs=63.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+.+..++.++..+++.+    ....+....+|+++.+++.+.+
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~----~~~~~~~~~~d~~~~~~~~~~~  197 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ----EVPECIVNVYDLNDTEKLKAEI  197 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh----cCCCceeEEechhhhhHHHhhh
Confidence            478999999999 69999999999999996 99999985323444444444432    2334556678887766665544


Q ss_pred             HHHHHhcCCccEEEEccccc
Q 039897          118 DEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +       ..|+||||..+.
T Consensus       198 ~-------~~DilINaTp~G  210 (289)
T PRK12548        198 A-------SSDILVNATLVG  210 (289)
T ss_pred             c-------cCCEEEEeCCCC
Confidence            3       469999998764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.69  E-value=2.9e-07  Score=88.53  Aligned_cols=105  Identities=15%  Similarity=0.137  Sum_probs=76.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -..++||||||+|-||+++++.|.++|++|...                               ..|++|.+.+.+.+..
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------------~~~l~d~~~v~~~i~~  426 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------------KGRLEDRSSLLADIRN  426 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------------ccccccHHHHHHHHHh
Confidence            345689999999999999999999999887311                               1356777777666654


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      .     ++|+|||+|+....  +-.+...++-...+++|+.++.++++++...   +.+++++||.
T Consensus       427 ~-----~pd~Vih~Aa~~~~--~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~---g~~~v~~Ss~  482 (668)
T PLN02260        427 V-----KPTHVFNAAGVTGR--PNVDWCESHKVETIRANVVGTLTLADVCREN---GLLMMNFATG  482 (668)
T ss_pred             h-----CCCEEEECCcccCC--CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc---CCeEEEEccc
Confidence            3     69999999997432  1112233455788999999999999999764   3356666554

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.68  E-value=4.2e-07  Score=76.00  Aligned_cols=194  Identities=16%  Similarity=0.173  Sum_probs=126.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..++|-++-|.||+|-+|+-++.+|++.|-.|++-+|..+......+..-        .-+++.++..|+.|++++++.+
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG--------dLGQvl~~~fd~~DedSIr~vv  128 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG--------DLGQVLFMKFDLRDEDSIRAVV  128 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc--------cccceeeeccCCCCHHHHHHHH
Confidence            56889999999999999999999999999999999997666554444433        3467899999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +       .-++|||..|--.+.+.+..         -++|+.+.-.+.+.+...-.  -++|.+|+.......+.    
T Consensus       129 k-------~sNVVINLIGrd~eTknf~f---------~Dvn~~~aerlAricke~GV--erfIhvS~Lganv~s~Sr~Lr  190 (391)
T KOG2865|consen  129 K-------HSNVVINLIGRDYETKNFSF---------EDVNVHIAERLARICKEAGV--ERFIHVSCLGANVKSPSRMLR  190 (391)
T ss_pred             H-------hCcEEEEeeccccccCCccc---------ccccchHHHHHHHHHHhhCh--hheeehhhccccccChHHHHH
Confidence            7       47899999997554444332         35777788888777754322  38999999875543333    


Q ss_pred             HHHHHHHHhhCC-eEEEEEecccccCCCCCCCCCHHHHHhh--ccCCCCCC--------CCCccchhhhhhhhhccC
Q 039897          194 ARGLALQLVERG-IRVNGVAPGPIWTPLIPSSFSEEESAQF--GSEVPMKR--------AGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ~~~la~e~~~~g-i~vn~i~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~~--------~~~~~dva~~~~~L~s~~  259 (272)
                      .+.+..+--..- -....|.|..+......  +-......+  ...+|+..        ....-|||++++..+-++
T Consensus       191 sK~~gE~aVrdafPeAtIirPa~iyG~eDr--fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp  265 (391)
T KOG2865|consen  191 SKAAGEEAVRDAFPEATIIRPADIYGTEDR--FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDP  265 (391)
T ss_pred             hhhhhHHHHHhhCCcceeechhhhcccchh--HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCc
Confidence            333332221110 12345677655332210  001011111  12223322        235579999999888766

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.68  E-value=1e-07  Score=79.54  Aligned_cols=187  Identities=16%  Similarity=0.138  Sum_probs=106.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      |+|+||+|.+|+.+++.|++.|++|.++.|+..+.  .   .+.+.      ...+..+.+|+.+++++.+.++      
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~--~---~~~l~------~~g~~vv~~d~~~~~~l~~al~------   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD--R---AQQLQ------ALGAEVVEADYDDPESLVAALK------   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH--H---HHHHH------HTTTEEEES-TT-HHHHHHHHT------
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh--h---hhhhh------cccceEeecccCCHHHHHHHHc------
Confidence            79999999999999999999999999999986221  1   22222      1245678999999988888775      


Q ss_pred             CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC----Chh-----HH
Q 039897          125 GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH----SPE-----AR  195 (272)
Q Consensus       125 g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~----~~~-----~~  195 (272)
                       ++|.|+++.+....      ..           .....++++++...-.  .++|+.+-......    .+.     .+
T Consensus        64 -g~d~v~~~~~~~~~------~~-----------~~~~~~li~Aa~~agV--k~~v~ss~~~~~~~~~~~~p~~~~~~~k  123 (233)
T PF05368_consen   64 -GVDAVFSVTPPSHP------SE-----------LEQQKNLIDAAKAAGV--KHFVPSSFGADYDESSGSEPEIPHFDQK  123 (233)
T ss_dssp             -TCSEEEEESSCSCC------CH-----------HHHHHHHHHHHHHHT---SEEEESEESSGTTTTTTSTTHHHHHHHH
T ss_pred             -CCceEEeecCcchh------hh-----------hhhhhhHHHhhhcccc--ceEEEEEecccccccccccccchhhhhh
Confidence             89999988886431      01           1122344555443211  36765443333311    122     22


Q ss_pred             HHHHH-HhhCCeEEEEEecccccCCCCCCCCC---HHHHH-hhccCCCCC---CC-CCccchhhhhhhhhccCCCCcccc
Q 039897          196 GLALQ-LVERGIRVNGVAPGPIWTPLIPSSFS---EEESA-QFGSEVPMK---RA-GQPIEVAPCYVFLACNHCSSYITG  266 (272)
Q Consensus       196 ~la~e-~~~~gi~vn~i~PG~v~t~~~~~~~~---~~~~~-~~~~~~~~~---~~-~~~~dva~~~~~L~s~~~~~~~tG  266 (272)
                      ....+ +.+.++....|.||+....+......   .+... .+.-..+..   .+ .+.+|++..+..++.++ ..+..|
T Consensus       124 ~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p-~~~~~~  202 (233)
T PF05368_consen  124 AEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDP-EKHNNG  202 (233)
T ss_dssp             HHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSG-GGTTEE
T ss_pred             hhhhhhhhhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcCh-HHhcCC
Confidence            22233 44469999999999764332211000   00000 000111111   22 26789999999998875 444345


Q ss_pred             eee
Q 039897          267 QVL  269 (272)
Q Consensus       267 ~~i  269 (272)
                      ..+
T Consensus       203 ~~~  205 (233)
T PF05368_consen  203 KTI  205 (233)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            544

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.65  E-value=1.5e-07  Score=84.00  Aligned_cols=149  Identities=16%  Similarity=0.144  Sum_probs=90.3

Q ss_pred             CCCCCcEEEEEcC---------------CCc-hHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCce
Q 039897           38 NKLRGKVALVTGG---------------DSG-IGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM  101 (272)
Q Consensus        38 ~~l~~k~vlVtGa---------------s~g-IG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (272)
                      .+|+||++|||||               |+| +|.++|+.|..+|++|++++++....                ...  .
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------------~~~--~  242 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------------TPP--G  242 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------------CCC--C
Confidence            4589999999999               666 99999999999999999988753211                111  2


Q ss_pred             EEeccCCChHHH-HHHHHHHHHhcCCccEEEEcccccCCCCCcccCC--HHHHHHHHHhhhHHHHHHHHHHHhccccCCe
Q 039897          102 AISADLGFDENC-KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID--EERLERVFRTNIFSHFFMTRHSLRHMNEGSA  178 (272)
Q Consensus       102 ~~~~D~~~~~~~-~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~  178 (272)
                      ...+|+++.+++ +++++++   ++.+|++|+|||+.. ..+....+  .......+.+|+.-.--++..+....+ +..
T Consensus       243 ~~~~~v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd-~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~-~~~  317 (390)
T TIGR00521       243 VKSIKVSTAEEMLEAALNEL---AKDFDIFISAAAVAD-FKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKK-HQV  317 (390)
T ss_pred             cEEEEeccHHHHHHHHHHhh---cccCCEEEEcccccc-ccccccccccccccCCceeEEEEeCcHHHHHHHhhCC-CcE
Confidence            256799888877 5555443   467999999999953 33322111  111112345677777777776664322 222


Q ss_pred             EEEecCCCCccCChhHHHHHHHHhhCCeEEEEEe
Q 039897          179 IINTTSVEPLWHSPEARGLALQLVERGIRVNGVA  212 (272)
Q Consensus       179 iv~vsS~~~~~~~~~~~~la~e~~~~gi~vn~i~  212 (272)
                      +|-+.--.  .. .........+.++|..+.+.+
T Consensus       318 lvgF~aEt--~~-~l~~~A~~kl~~k~~D~ivaN  348 (390)
T TIGR00521       318 IVGFKAET--ND-DLIKYAKEKLKKKNLDMIVAN  348 (390)
T ss_pred             EEEEEcCC--Cc-HHHHHHHHHHHHcCCCEEEEc
Confidence            33333221  11 023444455556665544443

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.65  E-value=1.8e-07  Score=77.90  Aligned_cols=99  Identities=20%  Similarity=0.244  Sum_probs=67.8

Q ss_pred             EEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSG-IGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~g-IG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +-.||+.|+| ||+++|++|+++|++|++++++.....              ....++.++.+     ++..++.+.+.+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------------~~~~~v~~i~v-----~s~~~m~~~l~~   77 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------------EPHPNLSIIEI-----ENVDDLLETLEP   77 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------------CCCCCeEEEEE-----ecHHHHHHHHHH
Confidence            5678876655 999999999999999999987531100              01223445553     233344444445


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHH
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH  162 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~  162 (272)
                      .++.+|+||||||+.. ..+....+.++|..++++|.+..
T Consensus        78 ~~~~~DivIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         78 LVKDHDVLIHSMAVSD-YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             HhcCCCEEEeCCccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence            5567999999999954 45667778889999988877554

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.57  E-value=1.1e-06  Score=79.29  Aligned_cols=139  Identities=17%  Similarity=0.177  Sum_probs=91.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecccchhhhHHHHH---------HHHHHhhhcCCCCceEEec
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA---TVAFTYVKSQEEKDAQETL---------EILREAKTSDAKDPMAISA  105 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~---~v~i~~r~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~  105 (272)
                      .-++||+++||||+|.+|.-+.+.|+..--   +++++-|.. +.....+.+         +.+.+.....-.++..+..
T Consensus         8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k-~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~G   86 (467)
T KOG1221|consen    8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAK-KGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAG   86 (467)
T ss_pred             HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecC-CCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccc
Confidence            458999999999999999999999986532   566665543 333222222         2233322223467888999


Q ss_pred             cCCChHH-HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          106 DLGFDEN-CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       106 D~~~~~~-~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                      |+++++- +.+.-.+  .....+|+|||+|+... .       .+.++..+.+|++|+.++++.+... ++-..++++|+
T Consensus        87 Di~~~~LGis~~D~~--~l~~eV~ivih~AAtvr-F-------de~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVST  155 (467)
T KOG1221|consen   87 DISEPDLGISESDLR--TLADEVNIVIHSAATVR-F-------DEPLDVALGINTRGTRNVLQLAKEM-VKLKALVHVST  155 (467)
T ss_pred             cccCcccCCChHHHH--HHHhcCCEEEEeeeeec-c-------chhhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeeh
Confidence            9988641 1111111  11137999999999742 1       2345777899999999999977554 44457888888


Q ss_pred             CCCc
Q 039897          185 VEPL  188 (272)
Q Consensus       185 ~~~~  188 (272)
                      ..+.
T Consensus       156 Ay~n  159 (467)
T KOG1221|consen  156 AYSN  159 (467)
T ss_pred             hhee
Confidence            6443

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.55  E-value=9.4e-07  Score=71.76  Aligned_cols=84  Identities=25%  Similarity=0.294  Sum_probs=62.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++++++|+||+|++|+.+++.|++.|++|++++|+.   +++++..+.+.+     ........+|..+.+++.+.+
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~---~~~~~l~~~l~~-----~~~~~~~~~~~~~~~~~~~~~   95 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDL---ERAQKAADSLRA-----RFGEGVGAVETSDDAARAAAI   95 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHHHh-----hcCCcEEEeeCCCHHHHHHHH
Confidence            368899999999999999999999999999999999874   344444444331     113345567888877776666


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      .       ..|+||++...
T Consensus        96 ~-------~~diVi~at~~  107 (194)
T cd01078          96 K-------GADVVFAAGAA  107 (194)
T ss_pred             h-------cCCEEEECCCC
Confidence            4       57888887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.54  E-value=4e-07  Score=88.25  Aligned_cols=173  Identities=17%  Similarity=0.170  Sum_probs=128.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..-..|.++|+||-||.|.+++..|.++|++ +++++|+.-+. -.+..+  ++.+.. .+.++..-..|++..+..+.+
T Consensus      1764 ~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirt-GYQa~~--vrrWr~-~GVqV~vsT~nitt~~ga~~L 1839 (2376)
T KOG1202|consen 1764 YCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRT-GYQALM--VRRWRR-RGVQVQVSTSNITTAEGARGL 1839 (2376)
T ss_pred             hcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchh-hHHHHH--HHHHHh-cCeEEEEecccchhhhhHHHH
Confidence            4455789999999999999999999999995 77777764322 122222  222221 466777778899999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---  193 (272)
                      +++.. +.+.+..++|.|.+.. .+.+++.+.++|+.+-+..+.|+.+|-+.....-..-..+|.+||+++-++..+   
T Consensus      1840 i~~s~-kl~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtN 1917 (2376)
T KOG1202|consen 1840 IEESN-KLGPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTN 1917 (2376)
T ss_pred             HHHhh-hcccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccc
Confidence            88753 5588999999999865 478899999999999999999999998766554433347888999877666554   


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccc
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPI  216 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v  216 (272)
                             +..+..+-..+|..=.+|.-|.+
T Consensus      1918 YG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1918 YGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             cchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence                   55556555566766667776655

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.46  E-value=1.7e-05  Score=67.44  Aligned_cols=180  Identities=13%  Similarity=-0.007  Sum_probs=104.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +.+|||||||.+|.+++++|.++|++|++..|+.+....+             . ..+.+...|+.++.++...++    
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~-------------~-~~v~~~~~d~~~~~~l~~a~~----   62 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL-------------A-GGVEVVLGDLRDPKSLVAGAK----   62 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhh-------------c-CCcEEEEeccCCHhHHHHHhc----
Confidence            3799999999999999999999999999999985543322             2 567889999999998888775    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----HH-HH
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----AR-GL  197 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----~~-~l  197 (272)
                         +++.+++..+... ... ..         ......+.....+...   .....++.+|........+.    .+ ..
T Consensus        63 ---G~~~~~~i~~~~~-~~~-~~---------~~~~~~~~~~~a~~a~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  125 (275)
T COG0702          63 ---GVDGVLLISGLLD-GSD-AF---------RAVQVTAVVRAAEAAG---AGVKHGVSLSVLGADAASPSALARAKAAV  125 (275)
T ss_pred             ---cccEEEEEecccc-ccc-ch---------hHHHHHHHHHHHHHhc---CCceEEEEeccCCCCCCCccHHHHHHHHH
Confidence               7888888887643 221 11         1222233344444333   12346777777765442222    12 22


Q ss_pred             HHHHhhCCeEEEEEe-cccccCCCCCCCCCHHHHHhhccCCCC----CCCCCccchhhhhhhhhccC
Q 039897          198 ALQLVERGIRVNGVA-PGPIWTPLIPSSFSEEESAQFGSEVPM----KRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       198 a~e~~~~gi~vn~i~-PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dva~~~~~L~s~~  259 (272)
                      -.-+...|+.-..+. ++++..... .. ............+.    -.....+|++..+...+..+
T Consensus       126 e~~l~~sg~~~t~lr~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~  190 (275)
T COG0702         126 EAALRSSGIPYTTLRRAAFYLGAGA-AF-IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAP  190 (275)
T ss_pred             HHHHHhcCCCeEEEecCeeeeccch-hH-HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCC
Confidence            222334566644454 444332221 10 11111111111111    12346678888777776544

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.43  E-value=1.1e-06  Score=73.55  Aligned_cols=207  Identities=14%  Similarity=0.067  Sum_probs=132.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +.+|||||.|-||...+..++..  .++.+.++.-.--..  .+.+++.+     ...+..++..|+.+...+..++.+ 
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~-----n~p~ykfv~~di~~~~~~~~~~~~-   78 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVR-----NSPNYKFVEGDIADADLVLYLFET-   78 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhc-----cCCCceEeeccccchHHHHhhhcc-
Confidence            89999999999999999999876  334333322100000  22222222     577889999999998877777754 


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  193 (272)
                          ..+|.|||.|......     .+.-+-...++.|+.++..|++.+.... +-.++|++|+-..++..-.       
T Consensus        79 ----~~id~vihfaa~t~vd-----~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~~~~~~~E~  148 (331)
T KOG0747|consen   79 ----EEIDTVIHFAAQTHVD-----RSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSDEDAVVGEA  148 (331)
T ss_pred             ----CchhhhhhhHhhhhhh-----hhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCcccccccccc
Confidence                5899999999874321     1222224457889999999999887653 2358999999754443222       


Q ss_pred             -----------HHHHHH-----HHhhCCeEEEEEecccccCCCCCCC-CCHHHHH---------hhccCCCCCCCCCccc
Q 039897          194 -----------ARGLAL-----QLVERGIRVNGVAPGPIWTPLIPSS-FSEEESA---------QFGSEVPMKRAGQPIE  247 (272)
Q Consensus       194 -----------~~~la~-----e~~~~gi~vn~i~PG~v~t~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~d  247 (272)
                                 ++..|.     .+..+|+.+..+.-+.|..|.-... ..+.+..         ........+.....+|
T Consensus       149 s~~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD  228 (331)
T KOG0747|consen  149 SLLNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVED  228 (331)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHH
Confidence                       222222     1334789999998888877753221 1111111         1233344455668999


Q ss_pred             hhhhhhhhhccCCCCcccceeecc
Q 039897          248 VAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       248 va~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +++++...+...    -.||+++|
T Consensus       229 ~~ea~~~v~~Kg----~~geIYNI  248 (331)
T KOG0747|consen  229 VSEAFKAVLEKG----ELGEIYNI  248 (331)
T ss_pred             HHHHHHHHHhcC----Cccceeec
Confidence            999988887643    35888876

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.27  E-value=4.8e-06  Score=67.51  Aligned_cols=177  Identities=17%  Similarity=0.191  Sum_probs=104.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA---TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~---~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++|+|||++|-+|.+|.+.+...|.   +.++.+                            .-.+|+++.++.++++++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~----------------------------skd~DLt~~a~t~~lF~~   53 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG----------------------------SKDADLTNLADTRALFES   53 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec----------------------------cccccccchHHHHHHHhc
Confidence            6899999999999999999998875   222221                            125799999999999987


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC---------------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS---------------  184 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS---------------  184 (272)
                      .     ++..|||.|+.....-.-.....+-|...+++|-    ++++.+...-.+  ++++..|               
T Consensus        54 e-----kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~ind----NVlhsa~e~gv~--K~vsclStCIfPdkt~yPIdEt  122 (315)
T KOG1431|consen   54 E-----KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIND----NVLHSAHEHGVK--KVVSCLSTCIFPDKTSYPIDET  122 (315)
T ss_pred             c-----CCceeeehHhhhcchhhcCCCchHHHhhcceech----hHHHHHHHhchh--hhhhhcceeecCCCCCCCCCHH
Confidence            4     7889999887643221222345555555554443    333333222111  2222222               


Q ss_pred             ------CCCc-cCChhHHHH-----HHHHhhCCeEEEEEecccccCCCCCCCCC-----H--------------HHHHhh
Q 039897          185 ------VEPL-WHSPEARGL-----ALQLVERGIRVNGVAPGPIWTPLIPSSFS-----E--------------EESAQF  233 (272)
Q Consensus       185 ------~~~~-~~~~~~~~l-----a~e~~~~gi~vn~i~PG~v~t~~~~~~~~-----~--------------~~~~~~  233 (272)
                            .... .++..++.+     .....++|-...++.|..+..|...-...     +              +...-+
T Consensus       123 mvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~Vw  202 (315)
T KOG1431|consen  123 MVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVW  202 (315)
T ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEe
Confidence                  1111 000001111     11122356677788887776664322111     0              112235


Q ss_pred             ccCCCCCCCCCccchhhhhhhhhcc
Q 039897          234 GSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       234 ~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      +...|++.+....|+|++.+|++.+
T Consensus       203 GsG~PlRqFiys~DLA~l~i~vlr~  227 (315)
T KOG1431|consen  203 GSGSPLRQFIYSDDLADLFIWVLRE  227 (315)
T ss_pred             cCCChHHHHhhHhHHHHHHHHHHHh
Confidence            6788999999999999999999854

>PRK09620 hypothetical protein; Provisional

Probab=98.25  E-value=2.4e-06  Score=71.06  Aligned_cols=36  Identities=33%  Similarity=0.491  Sum_probs=32.8

Q ss_pred             CCCcEEEEEcCC----------------CchHHHHHHHHHHcCCeEEEEecc
Q 039897           40 LRGKVALVTGGD----------------SGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        40 l~~k~vlVtGas----------------~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      |.||+||||+|.                |.+|.++|++|+++|++|++++..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            579999999886                999999999999999999988764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.19  E-value=8.2e-06  Score=72.38  Aligned_cols=77  Identities=22%  Similarity=0.261  Sum_probs=62.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +.+||.|+ |+||+.+|..|+++| .+|.+++|+..+..+....          ...++.++++|+.+.+.+.++++   
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~----------~~~~v~~~~vD~~d~~al~~li~---   67 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL----------IGGKVEALQVDAADVDALVALIK---   67 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh----------ccccceeEEecccChHHHHHHHh---
Confidence            57899999 999999999999999 8999999985443333221          24489999999999998888887   


Q ss_pred             HhcCCccEEEEccccc
Q 039897          122 NAYGKIDILVNNAAVQ  137 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~  137 (272)
                          ..|+|||++...
T Consensus        68 ----~~d~VIn~~p~~   79 (389)
T COG1748          68 ----DFDLVINAAPPF   79 (389)
T ss_pred             ----cCCEEEEeCCch
Confidence                349999999874

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.14  E-value=0.00019  Score=66.14  Aligned_cols=213  Identities=16%  Similarity=0.126  Sum_probs=124.0

Q ss_pred             CCCCCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           37 SNKLRGKVALVTGGD-SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        37 ~~~l~~k~vlVtGas-~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ...+.++++||||++ +.||-+++..|++.|++|+++..+-  .++.....+.+-......+.....+.++..+..++++
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~--s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRL--SEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccc--cHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            355889999999988 6899999999999999999986543  3344555555555444467777888999999999999


Q ss_pred             HHHHHHHhcC--------------CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----C
Q 039897          116 VVDEVVNAYG--------------KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----G  176 (272)
Q Consensus       116 ~~~~~~~~~g--------------~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~  176 (272)
                      +++.|-.+..              .++.++-.|.+.. .+.+.+..... +..+++-+++...++-.+.+.-..     .
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R  546 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTR  546 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCc-cCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccc
Confidence            9999877432              2577777777632 34555555433 222344444444444444333211     2


Q ss_pred             CeEEEecCCC-CccCChh-------------HHHHHHH-HhhCCeEEEEEecccccCCCCCCC--CCHHHHHhhccCCCC
Q 039897          177 SAIINTTSVE-PLWHSPE-------------ARGLALQ-LVERGIRVNGVAPGPIWTPLIPSS--FSEEESAQFGSEVPM  239 (272)
Q Consensus       177 g~iv~vsS~~-~~~~~~~-------------~~~la~e-~~~~gi~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  239 (272)
                      -++|.-+|.. +.++.-+             .|--+.. |+.+ +.+.--.-|++....+-..  ..-+..+++.     
T Consensus       547 ~hVVLPgSPNrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~-vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~G-----  620 (866)
T COG4982         547 LHVVLPGSPNRGMFGGDGAYGESKLALDAVVNRWHSESSWAAR-VSLAHALIGWTRGTGLMGHNDIIVAAIEKAG-----  620 (866)
T ss_pred             eEEEecCCCCCCccCCCcchhhHHHHHHHHHHHhhccchhhHH-HHHhhhheeeeccccccCCcchhHHHHHHhC-----
Confidence            3466666643 3333222             1222222 3332 2222233466654432111  1112223321     


Q ss_pred             CCCCCccchhhhhhhhhccC
Q 039897          240 KRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~  259 (272)
                      -+.-+++|+|.-++-|++.+
T Consensus       621 V~tyS~~EmA~~LLgL~sae  640 (866)
T COG4982         621 VRTYSTDEMAFNLLGLASAE  640 (866)
T ss_pred             ceecCHHHHHHHHHhhccHH
Confidence            22336788888888887653

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.13  E-value=2.2e-05  Score=59.86  Aligned_cols=78  Identities=28%  Similarity=0.385  Sum_probs=54.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++++++++|.|+ ||.|++++..|.+.|++ |.++.|+.++   .++..+.+      ....+.++..     +++.+.
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~r---a~~l~~~~------~~~~~~~~~~-----~~~~~~   72 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPER---AEALAEEF------GGVNIEAIPL-----EDLEEA   72 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHH---HHHHHHHH------TGCSEEEEEG-----GGHCHH
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHH---HHHHHHHc------CccccceeeH-----HHHHHH
Confidence            4789999999997 89999999999999997 9999998444   44444333      2233444443     222333


Q ss_pred             HHHHHHhcCCccEEEEccccc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +       ...|+||++.+..
T Consensus        73 ~-------~~~DivI~aT~~~   86 (135)
T PF01488_consen   73 L-------QEADIVINATPSG   86 (135)
T ss_dssp             H-------HTESEEEE-SSTT
T ss_pred             H-------hhCCeEEEecCCC
Confidence            3       3699999998874

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.08  E-value=6.6e-05  Score=66.90  Aligned_cols=162  Identities=14%  Similarity=0.107  Sum_probs=97.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ...+-.+|+|+||+|++|+-+++.|.++|+.|..+.|+....+++.. + ..      .......+..|.....++.   
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~-~~------~d~~~~~v~~~~~~~~d~~---  143 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-V-FF------VDLGLQNVEADVVTAIDIL---  143 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-c-cc------cccccceeeeccccccchh---
Confidence            34667899999999999999999999999999999888444333322 0 00      1223334444444433222   


Q ss_pred             HHHHHhcC-CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---
Q 039897          118 DEVVNAYG-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g-~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---  193 (272)
                      ..+.+... ...+++-++|......        +..---.+.+.|..+++.++...-.  .+++++||+.+......   
T Consensus       144 ~~~~~~~~~~~~~v~~~~ggrp~~e--------d~~~p~~VD~~g~knlvdA~~~aGv--k~~vlv~si~~~~~~~~~~~  213 (411)
T KOG1203|consen  144 KKLVEAVPKGVVIVIKGAGGRPEEE--------DIVTPEKVDYEGTKNLVDACKKAGV--KRVVLVGSIGGTKFNQPPNI  213 (411)
T ss_pred             hhhhhhccccceeEEecccCCCCcc--------cCCCcceecHHHHHHHHHHHHHhCC--ceEEEEEeecCcccCCCchh
Confidence            22222222 3556777777643221        1111124556677777887744333  38999998865544322   


Q ss_pred             ---------H-HHHHHHHhhCCeEEEEEecccccCCC
Q 039897          194 ---------A-RGLALQLVERGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       194 ---------~-~~la~e~~~~gi~vn~i~PG~v~t~~  220 (272)
                               . +....++.+.|+.=..|.||....+.
T Consensus       214 ~~~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  214 LLLNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             hhhhhhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence                     1 33445556678888889999876543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.08  E-value=1.8e-05  Score=72.66  Aligned_cols=78  Identities=28%  Similarity=0.316  Sum_probs=57.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++..  +.+.+..+++..      .++.++..|..+         
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~--~~~~~~~~~l~~------~~~~~~~~~~~~---------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEE--DQLKEALEELGE------LGIELVLGEYPE---------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHHHHh------cCCEEEeCCcch---------
Confidence            57899999999888 999999999999999999988642  223333333322      235577777765         


Q ss_pred             HHHHhcCCccEEEEccccc
Q 039897          119 EVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~  137 (272)
                         +..+.+|+||+++|+.
T Consensus        64 ---~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         64 ---EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             ---hHhhcCCEEEECCCCC
Confidence               1235799999999973

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.07  E-value=2.3e-05  Score=62.92  Aligned_cols=78  Identities=27%  Similarity=0.312  Sum_probs=48.4

Q ss_pred             CCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEE
Q 039897           40 LRGKVALVTGG----------------DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI  103 (272)
Q Consensus        40 l~~k~vlVtGa----------------s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (272)
                      |+||+||||+|                ||..|.++|+++..+|++|+++.....-.                ....+..+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~----------------~p~~~~~i   64 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP----------------PPPGVKVI   64 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------TTEEEE
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc----------------ccccceEE
Confidence            67999999986                48899999999999999999997752100                12234444


Q ss_pred             eccCCChHHHHHHHHHHHHhcCCccEEEEcccccC
Q 039897          104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       104 ~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~  138 (272)
                      .  +.+   ..++.+.+.+....-|++|++|++..
T Consensus        65 ~--v~s---a~em~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   65 R--VES---AEEMLEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             E---SS---HHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred             E--ecc---hhhhhhhhccccCcceeEEEecchhh
Confidence            4  443   44555555555556699999999853

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.02  E-value=0.00021  Score=56.34  Aligned_cols=138  Identities=10%  Similarity=0.043  Sum_probs=90.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +++.|+|+||..|..|+++..++|+.|..+.|++.+...               ...+...+.|+.+++++.+.+.    
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~---------------~~~~~i~q~Difd~~~~a~~l~----   61 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA---------------RQGVTILQKDIFDLTSLASDLA----   61 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc---------------cccceeecccccChhhhHhhhc----
Confidence            368899999999999999999999999999998554311               1345578999999888765553    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-------  193 (272)
                         +.|+||...|.....       .+.  .+.        ...++++..++.  ..|++.++...+..-.++       
T Consensus        62 ---g~DaVIsA~~~~~~~-------~~~--~~~--------k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p  121 (211)
T COG2910          62 ---GHDAVISAFGAGASD-------NDE--LHS--------KSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTP  121 (211)
T ss_pred             ---CCceEEEeccCCCCC-------hhH--HHH--------HHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCC
Confidence               799999988875321       111  110        113333333333  357888887766555444       


Q ss_pred             ---------HHHHHHHH----hhCCeEEEEEecccccCC
Q 039897          194 ---------ARGLALQL----VERGIRVNGVAPGPIWTP  219 (272)
Q Consensus       194 ---------~~~la~e~----~~~gi~vn~i~PG~v~t~  219 (272)
                               +..-+..+    ...++.-.-++|-....|
T Consensus       122 ~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~P  160 (211)
T COG2910         122 DFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEP  160 (211)
T ss_pred             CCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCC
Confidence                     22223322    124577778888776555

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.00  E-value=2e-05  Score=70.82  Aligned_cols=76  Identities=22%  Similarity=0.276  Sum_probs=56.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.+..   ++..+.+      ...++...++|+.|.+++.++++    
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~---~~~~~~~------~~~~~~~~~~d~~~~~~l~~~~~----   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKA---ERLAEKL------LGDRVEAVQVDVNDPESLAELLR----   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHH---HHHHT--------TTTTEEEEE--TTTHHHHHHHHT----
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHH---HHHHhhc------cccceeEEEEecCCHHHHHHHHh----
Confidence            789999 9999999999999874  799999984443   3333222      46688999999999998888876    


Q ss_pred             hcCCccEEEEccccc
Q 039897          123 AYGKIDILVNNAAVQ  137 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~  137 (272)
                         .-|+|||++|..
T Consensus        67 ---~~dvVin~~gp~   78 (386)
T PF03435_consen   67 ---GCDVVINCAGPF   78 (386)
T ss_dssp             ---TSSEEEE-SSGG
T ss_pred             ---cCCEEEECCccc
Confidence               469999999874

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00106 malate dehydrogenase

Probab=97.83  E-value=0.0002  Score=62.58  Aligned_cols=124  Identities=15%  Similarity=0.131  Sum_probs=76.9

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH
Q 039897           34 YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE  111 (272)
Q Consensus        34 ~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (272)
                      |+...--..++|+|||++|.||..++..|+.++.  .+++++++....+ .    -++.+    .....  ...++++.+
T Consensus        10 ~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~-a----~Dl~~----~~~~~--~i~~~~~~~   78 (323)
T PLN00106         10 CRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV-A----ADVSH----INTPA--QVRGFLGDD   78 (323)
T ss_pred             cccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee-E----chhhh----CCcCc--eEEEEeCCC
Confidence            3333445567999999999999999999997765  7999998752111 1    11111    11111  222333333


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          112 NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       112 ~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                      +..+.+       ...|+||+.||....  +  .   ..+.+.+..|+.....+.+.+..+- .+ .|+++.|
T Consensus        79 d~~~~l-------~~aDiVVitAG~~~~--~--g---~~R~dll~~N~~i~~~i~~~i~~~~-p~-aivivvS  135 (323)
T PLN00106         79 QLGDAL-------KGADLVIIPAGVPRK--P--G---MTRDDLFNINAGIVKTLCEAVAKHC-PN-ALVNIIS  135 (323)
T ss_pred             CHHHHc-------CCCCEEEEeCCCCCC--C--C---CCHHHHHHHHHHHHHHHHHHHHHHC-CC-eEEEEeC
Confidence            333333       479999999998532  1  1   2356778899988888888877653 23 4444444

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.82  E-value=7.6e-05  Score=65.42  Aligned_cols=40  Identities=23%  Similarity=0.307  Sum_probs=34.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALE-G-ATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~-G-~~v~i~~r~~~   77 (272)
                      .++++|+|+||||+|.||+.++++|+++ | .++++++|+..
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~  192 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQE  192 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHH
Confidence            4799999999999999999999999865 5 48888888643

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.82  E-value=0.00031  Score=61.65  Aligned_cols=120  Identities=11%  Similarity=0.090  Sum_probs=69.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-------CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG-------ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G-------~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +|+|||++|.||..++..|+..+       ..+++++++... +.+....-++.+      ... ....|++...+.   
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~g~~~Dl~d------~~~-~~~~~~~~~~~~---   72 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALEGVVMELQD------CAF-PLLKSVVATTDP---   72 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-ccccceeeehhh------ccc-cccCCceecCCH---
Confidence            69999999999999999999844       589999986431 111110001110      000 011133222222   


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                          .+.+.+.|+|||+||.....    ..+.   .+.++.|+.-.-.+.+.+..+-..++.++.++..
T Consensus        73 ----~~~l~~aDiVI~tAG~~~~~----~~~R---~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNP  130 (325)
T cd01336          73 ----EEAFKDVDVAILVGAMPRKE----GMER---KDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNP  130 (325)
T ss_pred             ----HHHhCCCCEEEEeCCcCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCc
Confidence                22334799999999985321    2232   4556778776666666665553335667777753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.79  E-value=0.00011  Score=60.63  Aligned_cols=135  Identities=17%  Similarity=0.114  Sum_probs=88.9

Q ss_pred             CCCC-CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHH-HHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLR-GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL-REAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~-~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ...+ .|++||||-+|.=|.-+++.|+..|+.|..+-|+.++....  .++.+ .+-....+.....+..|++|...+.+
T Consensus        23 ~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~--RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k  100 (376)
T KOG1372|consen   23 GAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTA--RIEHLYSNPHTHNGASMKLHYGDMTDSSCLIK  100 (376)
T ss_pred             cCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchh--hhhhhhcCchhcccceeEEeeccccchHHHHH
Confidence            3344 46999999999999999999999999999998876553221  12221 11112235567788999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhc-cccCCeEEEecC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRH-MNEGSAIINTTS  184 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~g~iv~vsS  184 (272)
                      ++..+     +++-+.|.|+-..-.     ++.+--+-.-++...|++.++.++... |.++-++---|+
T Consensus       101 ~I~~i-----kPtEiYnLaAQSHVk-----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAst  160 (376)
T KOG1372|consen  101 LISTI-----KPTEVYNLAAQSHVK-----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAST  160 (376)
T ss_pred             HHhcc-----CchhhhhhhhhcceE-----EEeecccceeeccchhhhhHHHHHHhcCcccceeEEeccc
Confidence            99887     577777777653321     111112233467778888888887544 333334443333

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.69  E-value=0.00043  Score=60.46  Aligned_cols=119  Identities=16%  Similarity=0.087  Sum_probs=75.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++.++|+|||++|.||..++..|+.++  ..++++++.....+     .-++.+    ...  .....+.+++.+..+.+
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~-----a~Dl~~----~~~--~~~v~~~td~~~~~~~l   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV-----AADLSH----IDT--PAKVTGYADGELWEKAL   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc-----ccchhh----cCc--CceEEEecCCCchHHHh
Confidence            455699999999999999999999665  57999998321111     112211    111  12233455544322222


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                             .+.|+||+++|....  +     -+.+...+..|+...-.+.+.+..+-  ..++|+++|.
T Consensus        75 -------~gaDvVVitaG~~~~--~-----~~tR~dll~~N~~i~~~i~~~i~~~~--~~~iviv~SN  126 (321)
T PTZ00325         75 -------RGADLVLICAGVPRK--P-----GMTRDDLFNTNAPIVRDLVAAVASSA--PKAIVGIVSN  126 (321)
T ss_pred             -------CCCCEEEECCCCCCC--C-----CCCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEecC
Confidence                   479999999998432  1     12356678899988888888776652  2367766664

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.65  E-value=0.00089  Score=58.41  Aligned_cols=106  Identities=23%  Similarity=0.301  Sum_probs=68.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..+++++|+|+++++|.++++.+...|++|++++++....+.       +..    .+..   ..+|..+.+....+.+.
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-------~~~----~~~~---~~~~~~~~~~~~~~~~~  230 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER-------AKE----LGAD---YVIDYRKEDFVREVREL  230 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-------HHH----cCCC---eEEecCChHHHHHHHHH
Confidence            457899999999999999999999999999998876432211       111    1111   22355555544444433


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                      ..  .+++|++++++|..            .+..               .+..++++|+++++++....
T Consensus       231 ~~--~~~~d~~i~~~g~~------------~~~~---------------~~~~l~~~G~~v~~~~~~~~  270 (342)
T cd08266         231 TG--KRGVDVVVEHVGAA------------TWEK---------------SLKSLARGGRLVTCGATTGY  270 (342)
T ss_pred             hC--CCCCcEEEECCcHH------------HHHH---------------HHHHhhcCCEEEEEecCCCC
Confidence            22  13699999998741            1111               22345678999999887553

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.63  E-value=0.0011  Score=57.11  Aligned_cols=39  Identities=23%  Similarity=0.260  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .+++|++++|+|. |++|+++++.|...|++|++.+|+.+
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~  185 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSA  185 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4789999999998 66999999999999999999988743

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.57  E-value=0.00035  Score=60.56  Aligned_cols=84  Identities=20%  Similarity=0.245  Sum_probs=66.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----cCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYAL----EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~----~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -++|-||||--|.-+++++..    .|....+.+|+   .+++++.++...+....+-.....+.+|.+|++++.+++++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn---~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRN---EKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCC---HHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh
Confidence            589999999999999999998    78899999998   55566666666553322223344788999999999999984


Q ss_pred             HHHhcCCccEEEEccccc
Q 039897          120 VVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~  137 (272)
                             -.+||||+|..
T Consensus        84 -------~~vivN~vGPy   94 (423)
T KOG2733|consen   84 -------ARVIVNCVGPY   94 (423)
T ss_pred             -------hEEEEeccccc
Confidence                   67999999973

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.52  E-value=0.00058  Score=62.46  Aligned_cols=79  Identities=28%  Similarity=0.320  Sum_probs=56.8

Q ss_pred             CCCCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCce
Q 039897           38 NKLRGKVALVTGG----------------DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM  101 (272)
Q Consensus        38 ~~l~~k~vlVtGa----------------s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (272)
                      .+|+||+||||+|                ||..|.+||+.+..+|++|.++.-... .               .....+.
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~---------------~~p~~v~  315 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L---------------ADPQGVK  315 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C---------------CCCCCce
Confidence            3599999999997                578999999999999999999864311 0               0233345


Q ss_pred             EEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccC
Q 039897          102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       102 ~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~  138 (272)
                      ++.+     ++.+++.+.+.+.+. .|++|++|++..
T Consensus       316 ~i~V-----~ta~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        316 VIHV-----ESARQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             EEEe-----cCHHHHHHHHHhhCC-CCEEEEeccccc
Confidence            5543     345566666655554 799999999853

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.48  E-value=0.00042  Score=63.55  Aligned_cols=37  Identities=30%  Similarity=0.233  Sum_probs=33.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ++.+|+++|||+++ +|.++|+.|++.|++|++.+++.
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~   38 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKP   38 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCC
Confidence            47899999999986 99999999999999999998764

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.45  E-value=0.0028  Score=58.67  Aligned_cols=114  Identities=18%  Similarity=0.189  Sum_probs=71.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh-------
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD-------  110 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------  110 (272)
                      ....+.+|+|+|+ |.+|...+..+...|++|++++++++..+..+.           .+  ..++..|..+.       
T Consensus       161 G~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-----------lG--A~~v~i~~~e~~~~~~gy  226 (509)
T PRK09424        161 GKVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-----------MG--AEFLELDFEEEGGSGDGY  226 (509)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC--CeEEEeccccccccccch
Confidence            3456889999985 678999999999999999999997544332211           22  23333333221       


Q ss_pred             ------HHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          111 ------ENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       111 ------~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                            +..++..+.+.+..++.|++|.++|+.....                    +..+++..+..|++++.|+.++.
T Consensus       227 a~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~a--------------------P~lit~~~v~~mkpGgvIVdvg~  286 (509)
T PRK09424        227 AKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPA--------------------PKLITAEMVASMKPGSVIVDLAA  286 (509)
T ss_pred             hhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccC--------------------cchHHHHHHHhcCCCCEEEEEcc
Confidence                  1112222222223357999999999843211                    22334667788899999999886


Q ss_pred             C
Q 039897          185 V  185 (272)
Q Consensus       185 ~  185 (272)
                      .
T Consensus       287 ~  287 (509)
T PRK09424        287 E  287 (509)
T ss_pred             C
Confidence            4

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.43  E-value=0.0008  Score=57.54  Aligned_cols=38  Identities=21%  Similarity=0.214  Sum_probs=33.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      ..+|+++|+|+ ||+|++++..|++.|++|.+++|+.++
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~  152 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSK  152 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            56889999998 699999999999999999999887443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.41  E-value=0.0018  Score=57.86  Aligned_cols=106  Identities=14%  Similarity=0.162  Sum_probs=64.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+.+++++|+|+ |.+|+..++.+...|++|++++++....+.+.   ..       .+.   .+..+..+.+.+.+.+ 
T Consensus       164 ~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~---~~-------~g~---~v~~~~~~~~~l~~~l-  228 (370)
T TIGR00518       164 GVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD---AE-------FGG---RIHTRYSNAYEIEDAV-  228 (370)
T ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH---Hh-------cCc---eeEeccCCHHHHHHHH-
Confidence            356778999987 78999999999999999999988743322221   11       111   1223444444443333 


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                            ...|+||+++++.....+. -+                   ++..+..|++++.|+.++..
T Consensus       229 ------~~aDvVI~a~~~~g~~~p~-li-------------------t~~~l~~mk~g~vIvDva~d  269 (370)
T TIGR00518       229 ------KRADLLIGAVLIPGAKAPK-LV-------------------SNSLVAQMKPGAVIVDVAID  269 (370)
T ss_pred             ------ccCCEEEEccccCCCCCCc-Cc-------------------CHHHHhcCCCCCEEEEEecC
Confidence                  3689999998763221111 11                   22233445677788888864

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.39  E-value=0.0013  Score=51.07  Aligned_cols=77  Identities=26%  Similarity=0.311  Sum_probs=51.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++++++++|+|+ |++|.++++.|.+.| .+|.+++|+.+..   ++..+++..    .     .+..+..+.+++    
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~---~~~~~~~~~----~-----~~~~~~~~~~~~----   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKA---KALAERFGE----L-----GIAIAYLDLEEL----   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH---HHHHHHHhh----c-----ccceeecchhhc----
Confidence            367889999998 899999999999996 7899998874433   332332221    0     022233333222    


Q ss_pred             HHHHHhcCCccEEEEcccccC
Q 039897          118 DEVVNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~  138 (272)
                            ....|+||++.+...
T Consensus        79 ------~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 ------LAEADLIINTTPVGM   93 (155)
T ss_pred             ------cccCCEEEeCcCCCC
Confidence                  247999999998743

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.39  E-value=0.0023  Score=56.19  Aligned_cols=101  Identities=21%  Similarity=0.306  Sum_probs=65.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      |+++||+||+||+|...++.....|+.++++..+.++   .. .+.+       .+.. .  ..|..+++    +.++++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k---~~-~~~~-------lGAd-~--vi~y~~~~----~~~~v~  204 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEK---LE-LLKE-------LGAD-H--VINYREED----FVEQVR  204 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH---HH-HHHh-------cCCC-E--EEcCCccc----HHHHHH
Confidence            8999999999999999999888889777766665322   22 2221       1221 1  22233322    555555


Q ss_pred             HhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          122 NAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       122 ~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +..+  ++|+++...|....                           ...+..++++|+++.++...+
T Consensus       205 ~~t~g~gvDvv~D~vG~~~~---------------------------~~~l~~l~~~G~lv~ig~~~g  245 (326)
T COG0604         205 ELTGGKGVDVVLDTVGGDTF---------------------------AASLAALAPGGRLVSIGALSG  245 (326)
T ss_pred             HHcCCCCceEEEECCCHHHH---------------------------HHHHHHhccCCEEEEEecCCC
Confidence            5443  59999998886311                           113344567899999999876

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.39  E-value=0.0032  Score=52.93  Aligned_cols=125  Identities=17%  Similarity=0.157  Sum_probs=74.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..++++||+|+++ +|+++++.+...|.+|+++.++....+.+    ..       .+..   ..+|..+.+....+.  
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~-------~g~~---~~~~~~~~~~~~~~~--  195 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KE-------LGAD---HVIDYKEEDLEEELR--  195 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HH-------hCCc---eeccCCcCCHHHHHH--
Confidence            4688999999999 99999999999999999998764322211    11       1111   122333333333332  


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHHH
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLAL  199 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la~  199 (272)
                       ....+.+|+++++++..                          ...+.....|++.|+++.++..........    ..
T Consensus       196 -~~~~~~~d~vi~~~~~~--------------------------~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~----~~  244 (271)
T cd05188         196 -LTGGGGADVVIDAVGGP--------------------------ETLAQALRLLRPGGRIVVVGGTSGGPPLDD----LR  244 (271)
T ss_pred             -HhcCCCCCEEEECCCCH--------------------------HHHHHHHHhcccCCEEEEEccCCCCCCccc----HH
Confidence             22235799999988752                          123344566678899999988654432211    12


Q ss_pred             HHhhCCeEEEEEe
Q 039897          200 QLVERGIRVNGVA  212 (272)
Q Consensus       200 e~~~~gi~vn~i~  212 (272)
                      ....+++++....
T Consensus       245 ~~~~~~~~~~~~~  257 (271)
T cd05188         245 RLLFKELTIIGST  257 (271)
T ss_pred             HHHhcceEEEEee
Confidence            2233456665554

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK06849 hypothetical protein; Provisional

Probab=97.39  E-value=0.0016  Score=58.74  Aligned_cols=83  Identities=16%  Similarity=0.142  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +.|+|||||++..+|..+++.|.+.|++|++++.+........+.           ......+...-.+++...+.+.++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~-----------~d~~~~~p~p~~d~~~~~~~L~~i   71 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRA-----------VDGFYTIPSPRWDPDAYIQALLSI   71 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHh-----------hhheEEeCCCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999998874332211111           111222222233444444445555


Q ss_pred             HHhcCCccEEEEccc
Q 039897          121 VNAYGKIDILVNNAA  135 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag  135 (272)
                      .++. ++|+||-...
T Consensus        72 ~~~~-~id~vIP~~e   85 (389)
T PRK06849         72 VQRE-NIDLLIPTCE   85 (389)
T ss_pred             HHHc-CCCEEEECCh
Confidence            5554 4899988765

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.38  E-value=0.0028  Score=58.61  Aligned_cols=114  Identities=18%  Similarity=0.186  Sum_probs=72.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCC---------
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLG---------  108 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---------  108 (272)
                      ....+.+++|.|+ |.+|...+..+...|++|++++++....+..    +.       .  ...++..|..         
T Consensus       160 g~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a----~~-------l--Ga~~v~v~~~e~g~~~~gY  225 (511)
T TIGR00561       160 GKVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV----QS-------M--GAEFLELDFKEEGGSGDGY  225 (511)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH-------c--CCeEEeccccccccccccc
Confidence            3455679999995 8999999999999999999998874432221    11       1  2234444432         


Q ss_pred             ----ChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          109 ----FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       109 ----~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                          +.+..++..+.+.+.....|++|+++-+.....                    +..+++..+..||+++.||.+++
T Consensus       226 a~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~a--------------------P~Lit~emv~~MKpGsvIVDlA~  285 (511)
T TIGR00561       226 AKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPA--------------------PKLITEEMVDSMKAGSVIVDLAA  285 (511)
T ss_pred             eeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCC--------------------CeeehHHHHhhCCCCCEEEEeee
Confidence                123333344444445568999999996533211                    12344555677888888888876


Q ss_pred             C
Q 039897          185 V  185 (272)
Q Consensus       185 ~  185 (272)
                      -
T Consensus       286 d  286 (511)
T TIGR00561       286 E  286 (511)
T ss_pred             C
Confidence            4

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.33  E-value=0.0034  Score=49.40  Aligned_cols=151  Identities=11%  Similarity=0.075  Sum_probs=89.0

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC
Q 039897           32 HDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF  109 (272)
Q Consensus        32 ~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (272)
                      ++..+...|+++.++|.||+|-.|..+.+++++.+-  +|+++.|+......              ....+.....|...
T Consensus         8 sklrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------------t~k~v~q~~vDf~K   73 (238)
T KOG4039|consen    8 SKLREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------------TDKVVAQVEVDFSK   73 (238)
T ss_pred             hHHHHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------------ccceeeeEEechHH
Confidence            334455789999999999999999999999999885  79999887422211              12233344566643


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEEcccccCCCC---CcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecC
Q 039897          110 DENCKRVVDEVVNAYGKIDILVNNAAVQYKAG---SVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTS  184 (272)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS  184 (272)
                      .+       +....+.++|+++++-|.-....   .+-.++-+-           .+.+.+..    +.+  ..|+.+||
T Consensus        74 l~-------~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDy-----------vl~~A~~A----Ke~Gck~fvLvSS  131 (238)
T KOG4039|consen   74 LS-------QLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDY-----------VLQLAQAA----KEKGCKTFVLVSS  131 (238)
T ss_pred             HH-------HHHhhhcCCceEEEeecccccccccCceEeechHH-----------HHHHHHHH----HhCCCeEEEEEec
Confidence            22       23333458999999988643211   122222221           12333333    233  37999999


Q ss_pred             CCCccCChh--------HHHHHHHHhhCCeEEEEEecccccCCC
Q 039897          185 VEPLWHSPE--------ARGLALQLVERGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       185 ~~~~~~~~~--------~~~la~e~~~~gi~vn~i~PG~v~t~~  220 (272)
                      ......+..        +..--.|+.=  =++..+.||++..+.
T Consensus       132 ~GAd~sSrFlY~k~KGEvE~~v~eL~F--~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  132 AGADPSSRFLYMKMKGEVERDVIELDF--KHIIILRPGPLLGER  173 (238)
T ss_pred             cCCCcccceeeeeccchhhhhhhhccc--cEEEEecCcceeccc
Confidence            754433222        2222222221  266788999996554

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.33  E-value=0.0022  Score=56.25  Aligned_cols=116  Identities=15%  Similarity=0.059  Sum_probs=72.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH--
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK--  114 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--  114 (272)
                      +|+|+|++|.+|..++..|+..|.       .++++++++..                   ........|+.+.....  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-------------------~~a~g~~~Dl~d~~~~~~~   61 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM-------------------KVLEGVVMELMDCAFPLLD   61 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc-------------------cccceeEeehhcccchhcC
Confidence            479999999999999999998654       48888885321                   11234455555543110  


Q ss_pred             HHH--HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          115 RVV--DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       115 ~~~--~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      ...  ....+.....|+||+.||....  +     -+++.+.+..|+.-.-.+.+.+..+-.+++.++.++..
T Consensus        62 ~~~~~~~~~~~~~~aDiVVitAG~~~~--~-----~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNP  127 (324)
T TIGR01758        62 GVVPTHDPAVAFTDVDVAILVGAFPRK--E-----GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNP  127 (324)
T ss_pred             ceeccCChHHHhCCCCEEEEcCCCCCC--C-----CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCc
Confidence            000  0113344679999999998432  1     12356677888877777777666553245677777653

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.32  E-value=0.0033  Score=54.75  Aligned_cols=37  Identities=27%  Similarity=0.330  Sum_probs=33.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      -.+.++||+|+++++|.++++.+...|++|+.+.++.
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~  197 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP  197 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH
Confidence            3478999999999999999999999999998887763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd00704 MDH Malate dehydrogenase

Probab=97.28  E-value=0.0033  Score=55.13  Aligned_cols=115  Identities=13%  Similarity=0.095  Sum_probs=69.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH--HHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE--NCK  114 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~  114 (272)
                      +|.|||++|.+|..++..|+..|.       .+++++++.. .+                  .......|+.+..  ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~-~~------------------~~~g~~~Dl~d~~~~~~~   62 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPA-MK------------------ALEGVVMELQDCAFPLLK   62 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCc-cC------------------ccceeeeehhhhcccccC
Confidence            689999999999999999998653       5889888642 11                  1223344444331  000


Q ss_pred             --HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          115 --RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       115 --~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                        ..-....+.....|+||+.||....  +  ..+.   .+.+..|+.-.-.+.+.+.++-..++.++.++-
T Consensus        63 ~~~i~~~~~~~~~~aDiVVitAG~~~~--~--g~tR---~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          63 GVVITTDPEEAFKDVDVAILVGAFPRK--P--GMER---ADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             CcEEecChHHHhCCCCEEEEeCCCCCC--c--CCcH---HHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence              0001223344689999999998532  1  2233   345667776666666666555324566777664

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.27  E-value=0.0019  Score=56.93  Aligned_cols=38  Identities=24%  Similarity=0.357  Sum_probs=33.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++.++|++.
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            4588999999996 7899999999999998 799898864

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.27  E-value=0.0015  Score=55.28  Aligned_cols=75  Identities=19%  Similarity=0.260  Sum_probs=53.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++|||+|||+- |+.+++.|.++|++|++..++....+.+.             ......+..+..+.+++.+++.+   
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-------------~~g~~~v~~g~l~~~~l~~~l~~---   63 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-------------IHQALTVHTGALDPQELREFLKR---   63 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-------------ccCCceEEECCCCHHHHHHHHHh---
Confidence            37999999998 99999999999999999888754332221             11223445566677766666654   


Q ss_pred             hcCCccEEEEcccc
Q 039897          123 AYGKIDILVNNAAV  136 (272)
Q Consensus       123 ~~g~ld~vI~~ag~  136 (272)
                        .++|+||+.+..
T Consensus        64 --~~i~~VIDAtHP   75 (256)
T TIGR00715        64 --HSIDILVDATHP   75 (256)
T ss_pred             --cCCCEEEEcCCH
Confidence              479999998754

This enzyme was found to be a monomer by gel filtration.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.23  E-value=0.0042  Score=53.81  Aligned_cols=38  Identities=29%  Similarity=0.271  Sum_probs=34.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+.+++++|.|. |++|+.++..|...|++|.+++|+.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~  185 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKS  185 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            4578999999997 6799999999999999999998874

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.21  E-value=0.0036  Score=53.98  Aligned_cols=81  Identities=19%  Similarity=0.266  Sum_probs=52.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..|++++|+|+++++|.++++.+...|++|++++++....+.       +..    .+.  . ..+|..+.+..+.+.+.
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-------~~~----~g~--~-~~~~~~~~~~~~~~~~~  208 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL-------VRQ----AGA--D-AVFNYRAEDLADRILAA  208 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-------HHH----cCC--C-EEEeCCCcCHHHHHHHH
Confidence            358999999999999999999999999999998886332211       111    111  1 12344444433333222


Q ss_pred             HHHhcCCccEEEEcccc
Q 039897          120 VVNAYGKIDILVNNAAV  136 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~  136 (272)
                       .. .+++|.+++++|.
T Consensus       209 -~~-~~~~d~vi~~~~~  223 (325)
T cd08253         209 -TA-GQGVDVIIEVLAN  223 (325)
T ss_pred             -cC-CCceEEEEECCch
Confidence             11 2369999998864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK05086 malate dehydrogenase; Provisional

Probab=97.19  E-value=0.0015  Score=56.97  Aligned_cols=116  Identities=18%  Similarity=0.147  Sum_probs=62.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHH-c--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYAL-E--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~-~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++++|+||+|++|.+++..|.. .  +..+++.++++. ...  ..+ ++.     .......+..  .+.+++.+    
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g--~al-Dl~-----~~~~~~~i~~--~~~~d~~~----   65 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPG--VAV-DLS-----HIPTAVKIKG--FSGEDPTP----   65 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccc--eeh-hhh-----cCCCCceEEE--eCCCCHHH----
Confidence            4799999999999999998855 2  446788877632 110  000 111     1011111221  11112111    


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                         .....|+||.++|.....    ..+   -...+..|+...-.+.+.+.++ ..++.|+.++-
T Consensus        66 ---~l~~~DiVIitaG~~~~~----~~~---R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsN  119 (312)
T PRK05086         66 ---ALEGADVVLISAGVARKP----GMD---RSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITN  119 (312)
T ss_pred             ---HcCCCCEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccC
Confidence               224699999999985421    122   2445677777777777766655 22334444443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.19  E-value=0.0061  Score=48.70  Aligned_cols=122  Identities=21%  Similarity=0.242  Sum_probs=74.7

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ...++.|+++.|.|. |.||+++|+.|...|++|+..++.......       ...    .     .+..     .++++
T Consensus        30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-------~~~----~-----~~~~-----~~l~e   87 (178)
T PF02826_consen   30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEG-------ADE----F-----GVEY-----VSLDE   87 (178)
T ss_dssp             TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHH-------HHH----T-----TEEE-----SSHHH
T ss_pred             CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhh-------ccc----c-----ccee-----eehhh
Confidence            346799999999975 899999999999999999999998554320       000    0     0111     23455


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHH
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEAR  195 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  195 (272)
                      ++.       .-|+|+++.........                     .+...++..|+++..+||++-....    .-.
T Consensus        88 ll~-------~aDiv~~~~plt~~T~~---------------------li~~~~l~~mk~ga~lvN~aRG~~v----de~  135 (178)
T PF02826_consen   88 LLA-------QADIVSLHLPLTPETRG---------------------LINAEFLAKMKPGAVLVNVARGELV----DED  135 (178)
T ss_dssp             HHH-------H-SEEEE-SSSSTTTTT---------------------SBSHHHHHTSTTTEEEEESSSGGGB-----HH
T ss_pred             hcc-------hhhhhhhhhccccccce---------------------eeeeeeeeccccceEEEeccchhhh----hhh
Confidence            655       37999888776332211                     1233456778888889998764222    145


Q ss_pred             HHHHHHhhCCeEEEEE
Q 039897          196 GLALQLVERGIRVNGV  211 (272)
Q Consensus       196 ~la~e~~~~gi~vn~i  211 (272)
                      +|...+....|.--++
T Consensus       136 aL~~aL~~g~i~ga~l  151 (178)
T PF02826_consen  136 ALLDALESGKIAGAAL  151 (178)
T ss_dssp             HHHHHHHTTSEEEEEE
T ss_pred             HHHHHHhhccCceEEE
Confidence            6666666655554333

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.15  E-value=0.00059  Score=45.62  Aligned_cols=36  Identities=33%  Similarity=0.477  Sum_probs=24.3

Q ss_pred             CCCC-cEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecc
Q 039897           39 KLRG-KVALVTGGDSGIGRA--VAHCYALEGATVAFTYVK   75 (272)
Q Consensus        39 ~l~~-k~vlVtGas~gIG~a--ia~~l~~~G~~v~i~~r~   75 (272)
                      .++| |+|||+|+|+|.|++  |+..| ..|++.+.+...
T Consensus        35 ~~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   35 KINGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             --TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            3455 899999999999999  66666 678888888765

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=97.13  E-value=0.0071  Score=53.41  Aligned_cols=100  Identities=16%  Similarity=0.129  Sum_probs=61.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ..|++|+|+|+ |++|...++.+...|+ +|++++++++..+.+    .+       .+.. .  ..|..++ ++.+   
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a----~~-------lGa~-~--vi~~~~~-~~~~---  228 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA----RE-------MGAD-K--LVNPQND-DLDH---  228 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH----HH-------cCCc-E--EecCCcc-cHHH---
Confidence            46899999986 8999999998888898 588888764332221    11       2221 1  2233332 2322   


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                       +....+++|+++.++|...                          .....+..++.+|+++.++..
T Consensus       229 -~~~~~g~~D~vid~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  268 (343)
T PRK09880        229 -YKAEKGYFDVSFEVSGHPS--------------------------SINTCLEVTRAKGVMVQVGMG  268 (343)
T ss_pred             -HhccCCCCCEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEEccC
Confidence             2222356999999987410                          111233456788999999864

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.06  E-value=0.0013  Score=56.56  Aligned_cols=40  Identities=28%  Similarity=0.351  Sum_probs=35.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchh
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEE   79 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~   79 (272)
                      ++.+|+++|+|+ ||+|++++..|.+.| .+|++++|+.++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a  160 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA  160 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            588999999997 899999999999999 7899999985443

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.05  E-value=0.0042  Score=54.81  Aligned_cols=38  Identities=29%  Similarity=0.373  Sum_probs=34.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      .+|++++|+|.|+ ||||..+++.|+..|. ++.+++.+.
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            4688999999998 8999999999999999 899998863

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.03  E-value=0.0011  Score=61.97  Aligned_cols=39  Identities=31%  Similarity=0.418  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .++++|++||+|+ ||+|++++..|++.|++|++++|+.+
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e  413 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYE  413 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            3578999999999 69999999999999999999988743

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.03  E-value=0.054  Score=41.48  Aligned_cols=117  Identities=17%  Similarity=0.152  Sum_probs=71.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+|++|.+|..++..|...+.  ++++++++..   .++....++.+.............   .++++         
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~---~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~---------   66 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINED---KAEGEALDLSHASAPLPSPVRITS---GDYEA---------   66 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHH---HHHHHHHHHHHHHHGSTEEEEEEE---SSGGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcc---cceeeehhhhhhhhhccccccccc---ccccc---------
Confidence            689999999999999999998875  7999999844   333334444443322222222222   22221         


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        ...-|++|..+|.....    ..+.   .+.+..|+.-.-.+.+.+..+- .++.++.++..
T Consensus        67 --~~~aDivvitag~~~~~----g~sR---~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtNP  120 (141)
T PF00056_consen   67 --LKDADIVVITAGVPRKP----GMSR---LDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTNP  120 (141)
T ss_dssp             --GTTESEEEETTSTSSST----TSSH---HHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SSS
T ss_pred             --cccccEEEEeccccccc----cccH---HHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCCc
Confidence              23699999999984321    2233   3446677766666666665553 35666666543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.00  E-value=0.0051  Score=50.22  Aligned_cols=37  Identities=24%  Similarity=0.356  Sum_probs=33.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      .+|.+++|+|.| .||+|..+++.|+..|. ++.+++.+
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            468999999998 67999999999999998 79998876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.00  E-value=0.0013  Score=54.07  Aligned_cols=108  Identities=19%  Similarity=0.218  Sum_probs=74.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALE-GAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~-G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +-+..+|||||+-|.+|..+|..|..+ |.. |++.+...... .              -...-.++..|+.|..++++.
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-~--------------V~~~GPyIy~DILD~K~L~eI  105 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-N--------------VTDVGPYIYLDILDQKSLEEI  105 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-h--------------hcccCCchhhhhhccccHHHh
Confidence            556789999999999999999988755 665 55544432221 1              112234678899998888887


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRH  172 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  172 (272)
                      +-.     .++|-+||-.+....      ......--..++|+.|..++++....+
T Consensus       106 VVn-----~RIdWL~HfSALLSA------vGE~NVpLA~~VNI~GvHNil~vAa~~  150 (366)
T KOG2774|consen  106 VVN-----KRIDWLVHFSALLSA------VGETNVPLALQVNIRGVHNILQVAAKH  150 (366)
T ss_pred             hcc-----cccceeeeHHHHHHH------hcccCCceeeeecchhhhHHHHHHHHc
Confidence            653     579999997765322      122223334789999999999987655

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.98  E-value=0.012  Score=50.79  Aligned_cols=42  Identities=21%  Similarity=0.243  Sum_probs=34.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhh
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKD   81 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~   81 (272)
                      .+.+|+++|.|+ ||.|++++..|++.|+ +|++++|+..+.+.
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~  166 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAA  166 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            467899999997 6799999999999998 79999998544333

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.96  E-value=0.0034  Score=54.85  Aligned_cols=104  Identities=13%  Similarity=0.141  Sum_probs=64.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.++||+|++|++|..+++.+...|++|+++.++.++.+.+    .+       .+.. .+  .|..+.+...+.+..
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~----~~-------lGa~-~v--i~~~~~~~~~~~~~~  202 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL----KK-------LGFD-VA--FNYKTVKSLEETLKK  202 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-------cCCC-EE--EeccccccHHHHHHH
Confidence            3588999999999999999998888899999887763332222    11       2221 12  222222233333333


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      ..  .+++|+++.+.|...                           ....+..++.+|+++.++...
T Consensus       203 ~~--~~gvdvv~d~~G~~~---------------------------~~~~~~~l~~~G~iv~~G~~~  240 (325)
T TIGR02825       203 AS--PDGYDCYFDNVGGEF---------------------------SNTVIGQMKKFGRIAICGAIS  240 (325)
T ss_pred             hC--CCCeEEEEECCCHHH---------------------------HHHHHHHhCcCcEEEEecchh
Confidence            32  136999998876410                           112334557889999988654

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.94  E-value=0.0032  Score=55.36  Aligned_cols=38  Identities=18%  Similarity=0.316  Sum_probs=33.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      -.|.++||+|++|++|..+++.+...|++|+.+.++.+
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~  187 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE  187 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            35899999999999999999988889999988877643

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.93  E-value=0.0068  Score=51.30  Aligned_cols=92  Identities=22%  Similarity=0.323  Sum_probs=62.6

Q ss_pred             CcEEEEEcCCCchHHHH--HHHHHHcCCeEEEEecccchhhh------HHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           42 GKVALVTGGDSGIGRAV--AHCYALEGATVAFTYVKSQEEKD------AQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        42 ~k~vlVtGas~gIG~ai--a~~l~~~G~~v~i~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      -|+|||.|+|+|.|.+.  +..|. .|++.+.+.......+.      ..+.. .+.....+.+--...+..|.-+.+.-
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~-~f~~~A~~kGlyAksingDaFS~e~k  118 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNA-AFKKFAKQKGLYAKSINGDAFSDEMK  118 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHH-HHHHHHHhcCceeeecccchhhHHHH
Confidence            38999999999988874  44455 57777776543222111      11111 12222333455567788999999989


Q ss_pred             HHHHHHHHHhcCCccEEEEccc
Q 039897          114 KRVVDEVVNAYGKIDILVNNAA  135 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag  135 (272)
                      +..++.+++.+|.+|.+|+.-+
T Consensus       119 ~kvIe~Ik~~~g~vDlvvYSlA  140 (398)
T COG3007         119 QKVIEAIKQDFGKVDLVVYSLA  140 (398)
T ss_pred             HHHHHHHHHhhccccEEEEecc
Confidence            9999999999999999998654

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.92  E-value=0.01  Score=51.70  Aligned_cols=36  Identities=22%  Similarity=0.271  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+.++||.|+++++|.++++.+.+.|++|+.+.++.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~  180 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSD  180 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            578999999999999999999999999998887764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.91  E-value=0.011  Score=51.72  Aligned_cols=115  Identities=16%  Similarity=0.182  Sum_probs=73.1

Q ss_pred             CCCCCCCCCCCCCCC--CCC-CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCC
Q 039897           23 MEPTPQFTSHDYKPS--NKL-RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD   99 (272)
Q Consensus        23 ~~~~~~~~~~~~~~~--~~l-~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~   99 (272)
                      ..|-.+.-+..|++.  .++ .|++++|+|.+ |+|...++.....|++|+.++++.++.+..++           .+..
T Consensus       145 aApllCaGiT~y~alk~~~~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-----------lGAd  212 (339)
T COG1064         145 AAPLLCAGITTYRALKKANVKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-----------LGAD  212 (339)
T ss_pred             hhhhhcCeeeEeeehhhcCCCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-----------hCCc
Confidence            344455555555543  333 48999999999 99999888777799999999998555433332           1221


Q ss_pred             ceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeE
Q 039897          100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAI  179 (272)
Q Consensus       100 ~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~i  179 (272)
                         +..|.++++..+.+-+       .+|++|.+++ ...                          ....++.++.+|++
T Consensus       213 ---~~i~~~~~~~~~~~~~-------~~d~ii~tv~-~~~--------------------------~~~~l~~l~~~G~~  255 (339)
T COG1064         213 ---HVINSSDSDALEAVKE-------IADAIIDTVG-PAT--------------------------LEPSLKALRRGGTL  255 (339)
T ss_pred             ---EEEEcCCchhhHHhHh-------hCcEEEECCC-hhh--------------------------HHHHHHHHhcCCEE
Confidence               2223334343333332       2899999988 321                          12234556789999


Q ss_pred             EEecCCC
Q 039897          180 INTTSVE  186 (272)
Q Consensus       180 v~vsS~~  186 (272)
                      +.++-..
T Consensus       256 v~vG~~~  262 (339)
T COG1064         256 VLVGLPG  262 (339)
T ss_pred             EEECCCC
Confidence            9998874

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.85  E-value=0.0027  Score=51.78  Aligned_cols=39  Identities=26%  Similarity=0.377  Sum_probs=35.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCH
Confidence            356899999999985 899999999999999999988773

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.84  E-value=0.0049  Score=48.72  Aligned_cols=38  Identities=29%  Similarity=0.323  Sum_probs=34.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .+|.||+++|+|++.-+|..+++.|.++|++|.++.|+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~   77 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSK   77 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECC
Confidence            57999999999997778999999999999999998875

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.81  E-value=0.037  Score=48.21  Aligned_cols=117  Identities=11%  Similarity=0.075  Sum_probs=68.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|.|.|+ |++|..++..|+..|  .++++++++....+.+   ..++.+.............   .+.++        
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~---a~dL~~~~~~~~~~~~i~~---~~~~~--------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGE---ALDLEDALAFLPSPVKIKA---GDYSD--------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHh---HhhHHHHhhccCCCeEEEc---CCHHH--------
Confidence            36889996 899999999999999  5799999985544333   3333322110111222221   12211        


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                         ...-|++|+++|....  +  ..+.   ...++.|..-...+.+.+..+ ...+.+++++..
T Consensus        66 ---l~~aDIVIitag~~~~--~--g~~R---~dll~~N~~i~~~~~~~i~~~-~~~~~vivvsNP  119 (306)
T cd05291          66 ---CKDADIVVITAGAPQK--P--GETR---LDLLEKNAKIMKSIVPKIKAS-GFDGIFLVASNP  119 (306)
T ss_pred             ---hCCCCEEEEccCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEEecCh
Confidence               1479999999998432  1  2233   244566665555555555443 235677777653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.81  E-value=0.027  Score=49.83  Aligned_cols=37  Identities=22%  Similarity=0.411  Sum_probs=32.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      -.|++++|.|+ |+||..++..+...|++|++++++++
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~  201 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPE  201 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHH
Confidence            34899999999 99999999999899999988887643

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.78  E-value=0.043  Score=45.71  Aligned_cols=36  Identities=28%  Similarity=0.367  Sum_probs=30.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      .|++++|+|.|. ||+|.++++.|+..|. +++++|.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            478889999975 6899999999999998 68888754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.75  E-value=0.012  Score=50.70  Aligned_cols=51  Identities=18%  Similarity=0.240  Sum_probs=38.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEIL   89 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~   89 (272)
                      .++++|++||.|+ ||-+++++..|+..|+ ++.++.|+.+..++.++..+.+
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~  171 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV  171 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence            4578899999997 5559999999999997 7889999754334445444444

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.73  E-value=0.0096  Score=51.21  Aligned_cols=37  Identities=32%  Similarity=0.401  Sum_probs=33.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+++++|+|+++++|..+++.+...|++|++++++.
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~  174 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSE  174 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCH
Confidence            3578999999999999999999999999999888763

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.71  E-value=0.05  Score=46.30  Aligned_cols=37  Identities=19%  Similarity=0.266  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~   75 (272)
                      ..|++.+|+|.|+ ||+|.++++.|+..| -++.+++.+
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4588899999975 699999999999999 478888765

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.70  E-value=0.0091  Score=51.37  Aligned_cols=43  Identities=23%  Similarity=0.265  Sum_probs=34.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDA   82 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~   82 (272)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+.+
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~L  165 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRL  165 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            467899999976 8889999999999997 699998885443333

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.69  E-value=0.016  Score=48.83  Aligned_cols=38  Identities=29%  Similarity=0.450  Sum_probs=32.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            4589999999998 9999999999999997 687876543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.68  E-value=0.034  Score=49.28  Aligned_cols=103  Identities=17%  Similarity=0.172  Sum_probs=63.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..|++|+|+|+ |++|...+..+...|++|++++++..+.+++. .+.+       .+.  ..  +|..++ ++.+ .  
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~-------~Ga--~~--v~~~~~-~~~~-~--  233 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEE-------LGA--TY--VNSSKT-PVAE-V--  233 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHH-------cCC--EE--ecCCcc-chhh-h--
Confidence            36899999985 99999999888888999999988432222222 1111       222  22  233322 2222 1  


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                        ...+++|++|.+.|...                          .+...+..++.+|+++.++....
T Consensus       234 --~~~~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  273 (355)
T cd08230         234 --KLVGEFDLIIEATGVPP--------------------------LAFEALPALAPNGVVILFGVPGG  273 (355)
T ss_pred             --hhcCCCCEEEECcCCHH--------------------------HHHHHHHHccCCcEEEEEecCCC
Confidence              12357999999987410                          12334456678899999887654

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.67  E-value=0.0087  Score=52.17  Aligned_cols=38  Identities=18%  Similarity=0.286  Sum_probs=33.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      -.|.++||+|++|++|..+++.+...|++|+.+.++.+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~  179 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD  179 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            45899999999999999999988889999988877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.67  E-value=0.025  Score=48.64  Aligned_cols=43  Identities=16%  Similarity=0.298  Sum_probs=34.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDA   82 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~   82 (272)
                      .+++|+++|.|+ ||-+++++..|++.|+ +++++.|+.++.+.+
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L  167 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQAL  167 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence            467899999997 7889999999999997 688888875443333

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.65  E-value=0.012  Score=52.81  Aligned_cols=37  Identities=24%  Similarity=0.362  Sum_probs=32.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      ..+++++|+|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3588999999965 7999999999999998 68888876

>PRK14968 putative methyltransferase; Provisional

Probab=96.65  E-value=0.024  Score=45.23  Aligned_cols=147  Identities=19%  Similarity=0.103  Sum_probs=79.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..++++|-.|++.|.   ++..+++++.+|+.+++++.-.+..++.+   ..... ...++.++.+|+.+.     +   
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~-~~~~~~~~~~d~~~~-----~---   86 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNA---KLNNI-RNNGVEVIRSDLFEP-----F---   86 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHH---HHcCC-CCcceEEEecccccc-----c---
Confidence            367889999977665   55556666899999998754433333322   21111 111277778886431     1   


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHH---HHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS---HFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~---~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                       .+  +.+|.++.|..+... .+.... .+.+...+..+..+   .-.+.+.+...|+.+|.++++.+..  .   ....
T Consensus        87 -~~--~~~d~vi~n~p~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~~~~~--~---~~~~  156 (188)
T PRK14968         87 -RG--DKFDVILFNPPYLPT-EEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLLQSSL--T---GEDE  156 (188)
T ss_pred             -cc--cCceEEEECCCcCCC-Cchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEEEccc--C---CHHH
Confidence             11  269999998876432 222111 11122222222222   3345677778888888877665421  1   1233


Q ss_pred             HHHHHhhCCeEEEEE
Q 039897          197 LALQLVERGIRVNGV  211 (272)
Q Consensus       197 la~e~~~~gi~vn~i  211 (272)
                      +...+.+.|.++..+
T Consensus       157 l~~~~~~~g~~~~~~  171 (188)
T PRK14968        157 VLEYLEKLGFEAEVV  171 (188)
T ss_pred             HHHHHHHCCCeeeee
Confidence            444444556655544

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.64  E-value=0.015  Score=48.45  Aligned_cols=36  Identities=28%  Similarity=0.446  Sum_probs=30.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEec
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYV   74 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r   74 (272)
                      .+|.+++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus        17 ~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            358899999998 67999999999999998 5777754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.63  E-value=0.024  Score=51.39  Aligned_cols=38  Identities=32%  Similarity=0.374  Sum_probs=34.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .+.|++++|+|. |.||+.+++.|...|++|+++++++.
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~  246 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPI  246 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCch
Confidence            478999999996 68999999999999999999988743

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.62  E-value=0.006  Score=52.63  Aligned_cols=77  Identities=14%  Similarity=0.119  Sum_probs=58.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ..++|-||+|-.|.-++++|+.+|.+..+.+|+..+   +......       .+.+...+.+.+  ++.++++++    
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~k---l~~l~~~-------LG~~~~~~p~~~--p~~~~~~~~----   70 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAK---LDALRAS-------LGPEAAVFPLGV--PAALEAMAS----   70 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHH---HHHHHHh-------cCccccccCCCC--HHHHHHHHh----
Confidence            468999999999999999999999999999998544   3333332       355555555554  666666664    


Q ss_pred             hcCCccEEEEcccccC
Q 039897          123 AYGKIDILVNNAAVQY  138 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~  138 (272)
                         ..++|+||+|...
T Consensus        71 ---~~~VVlncvGPyt   83 (382)
T COG3268          71 ---RTQVVLNCVGPYT   83 (382)
T ss_pred             ---cceEEEecccccc
Confidence               6899999999754

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.62  E-value=0.014  Score=51.64  Aligned_cols=81  Identities=17%  Similarity=0.230  Sum_probs=51.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      =.|+.+||.||+||+|.+.++.....|+..+++..+.++.+.+++           .+.   -...|..+++ +.+.++.
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-----------lGA---d~vvdy~~~~-~~e~~kk  220 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-----------LGA---DEVVDYKDEN-VVELIKK  220 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-----------cCC---cEeecCCCHH-HHHHHHh
Confidence            457899999999999999999888889555555554443332221           111   1344666533 2223322


Q ss_pred             HHHhcCCccEEEEccccc
Q 039897          120 VVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~  137 (272)
                      ..  .+++|+|+-|.|..
T Consensus       221 ~~--~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  221 YT--GKGVDVVLDCVGGS  236 (347)
T ss_pred             hc--CCCccEEEECCCCC
Confidence            21  46899999999984

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.61  E-value=0.0093  Score=52.86  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=32.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      -.|.++||+|++|++|..+++.+...|++|+.++++.
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~  193 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS  193 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence            3589999999999999999998888899998887763

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.61  E-value=0.0095  Score=54.03  Aligned_cols=39  Identities=10%  Similarity=0.190  Sum_probs=34.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~   77 (272)
                      .++.+++++|.|+ ||+|+.++.+|...|+ +++++.|+..
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~  216 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIE  216 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence            4689999999998 9999999999999996 6888888743

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.58  E-value=0.027  Score=49.47  Aligned_cols=36  Identities=19%  Similarity=0.088  Sum_probs=30.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~   76 (272)
                      ..|.++||+|+ |++|..+++.+...|++ |++++++.
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~  198 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSP  198 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence            45899999986 89999999998889999 88887763

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02928 oxidoreductase family protein

Probab=96.56  E-value=0.014  Score=51.77  Aligned_cols=125  Identities=18%  Similarity=0.190  Sum_probs=72.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++.||++.|.|- |.||+++|+.|...|++|+..+++.......  ... +      ....+..+........++++++
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~--~~~-~------~~~~~~~~~~~~~~~~~L~ell  224 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPED--GLL-I------PNGDVDDLVDEKGGHEDIYEFA  224 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhh--hhc-c------ccccccccccccCcccCHHHHH
Confidence            4699999999996 8999999999999999999988763221100  000 0      0000000000011223455555


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHH
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGL  197 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~l  197 (272)
                      .       .-|+|+.+........                     -.+....+..|+++..|||++-....    .-.+|
T Consensus       225 ~-------~aDiVvl~lPlt~~T~---------------------~li~~~~l~~Mk~ga~lINvaRG~lV----de~AL  272 (347)
T PLN02928        225 G-------EADIVVLCCTLTKETA---------------------GIVNDEFLSSMKKGALLVNIARGGLL----DYDAV  272 (347)
T ss_pred             h-------hCCEEEECCCCChHhh---------------------cccCHHHHhcCCCCeEEEECCCcccc----CHHHH
Confidence            4       4799988886532110                     12235667888888889998854322    13455


Q ss_pred             HHHHhhC
Q 039897          198 ALQLVER  204 (272)
Q Consensus       198 a~e~~~~  204 (272)
                      ...+...
T Consensus       273 ~~AL~~g  279 (347)
T PLN02928        273 LAALESG  279 (347)
T ss_pred             HHHHHcC
Confidence            5555443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.51  E-value=0.053  Score=59.43  Aligned_cols=163  Identities=14%  Similarity=0.144  Sum_probs=102.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+.++.++|++.+++++.+++.+|.++|+.|+++.... ..   ....       ......+-.+.+.-.++.++..++
T Consensus      1751 ~~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~-~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 1819 (2582)
T TIGR02813      1751 GKQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPW-VV---SHSA-------SPLASAIASVTLGTIDDTSIEAVI 1819 (2582)
T ss_pred             ccccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccc-cc---cccc-------cccccccccccccccchHHHHHHH
Confidence            356788999999899999999999999999998873211 00   0000       001223334556666778888888


Q ss_pred             HHHHHhcCCccEEEEcccccCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKA-GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS---  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~---  191 (272)
                      +.+....+.++.+||..+..... .......   +...-...+...|.+.|.+.+.+..  .+.++.++...|..+.   
T Consensus      1820 ~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~ 1896 (2582)
T TIGR02813      1820 KDIEEKTAQIDGFIHLQPQHKSVADKVDAIE---LPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNG 1896 (2582)
T ss_pred             HhhhccccccceEEEeccccccccccccccc---cchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCc
Confidence            88887778899999988764210 1111111   1111123344467777877665533  3567877777544332   


Q ss_pred             ------------h-h------HHHHHHHHhhCCeEEEEEecc
Q 039897          192 ------------P-E------ARGLALQLVERGIRVNGVAPG  214 (272)
Q Consensus       192 ------------~-~------~~~la~e~~~~gi~vn~i~PG  214 (272)
                                  + .      .|+++.||-.-.+|...+.|.
T Consensus      1897 ~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1897 DADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             cccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence                        0 1      789999997766777777664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.51  E-value=0.035  Score=50.26  Aligned_cols=39  Identities=33%  Similarity=0.420  Sum_probs=33.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .+.|++|+|.|.+ .||+.+++.+...|++|+++++++..
T Consensus       199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R  237 (413)
T cd00401         199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPIC  237 (413)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhh
Confidence            3789999999976 79999999999999999999887443

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.50  E-value=0.035  Score=49.57  Aligned_cols=36  Identities=22%  Similarity=0.271  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~   77 (272)
                      .|++|||+|+ |+||..++..+...|+ +|++++++++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~  227 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNED  227 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHH
Confidence            5789999985 8999999998888899 5888877643

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.49  E-value=0.014  Score=51.41  Aligned_cols=34  Identities=18%  Similarity=0.178  Sum_probs=30.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      +++||+|++|++|..+++.+...|+ +|+.+.++.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~  190 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD  190 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence            8999999999999999988888899 798887763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.48  E-value=0.038  Score=49.04  Aligned_cols=37  Identities=30%  Similarity=0.432  Sum_probs=30.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQ   77 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~   77 (272)
                      -.|+++||.|+ |++|...+..+...|++ |+.++++.+
T Consensus       175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~  212 (358)
T TIGR03451       175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDR  212 (358)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence            35899999985 99999999988888995 888877643

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02740 Alcohol dehydrogenase-like

Probab=96.48  E-value=0.051  Score=48.77  Aligned_cols=80  Identities=16%  Similarity=0.134  Sum_probs=49.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh-HHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD-ENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~  117 (272)
                      -.|++|||.|+ |+||..++..+...|+ +|++++++.+..+.++    +       .+.. .++  |..+. ++..+.+
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~----~-------~Ga~-~~i--~~~~~~~~~~~~v  261 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK----E-------MGIT-DFI--NPKDSDKPVHERI  261 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH----H-------cCCc-EEE--ecccccchHHHHH
Confidence            45889999985 9999999998888999 5888877643322221    1       2221 122  33322 1233333


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      .++..  +++|++|.+.|.
T Consensus       262 ~~~~~--~g~dvvid~~G~  278 (381)
T PLN02740        262 REMTG--GGVDYSFECAGN  278 (381)
T ss_pred             HHHhC--CCCCEEEECCCC
Confidence            33322  269999999885

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.46  E-value=0.012  Score=50.59  Aligned_cols=38  Identities=29%  Similarity=0.345  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .+++||+++|.|.++-.|++++..|.++|++|.++.+.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            57999999999999999999999999999999988763

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.45  E-value=0.025  Score=46.08  Aligned_cols=37  Identities=24%  Similarity=0.319  Sum_probs=33.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      ..|.+++|+|.|+ ||+|..++..|+..|. +++++|.+
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4588999999998 7899999999999999 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.45  E-value=0.019  Score=47.25  Aligned_cols=37  Identities=22%  Similarity=0.372  Sum_probs=32.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~   75 (272)
                      ..|++++|+|.|+ ||+|..+++.|+..|.. +.++|.+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4588999999995 89999999999999985 8888876

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.44  E-value=0.024  Score=51.93  Aligned_cols=39  Identities=26%  Similarity=0.330  Sum_probs=34.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      ..+.||+++|.|.+ .||+.+|+.|...|++|+++.+++.
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~  288 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPI  288 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCch
Confidence            36899999999976 5999999999999999999987743

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.43  E-value=0.024  Score=50.44  Aligned_cols=38  Identities=18%  Similarity=0.232  Sum_probs=32.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            4588999999987 8999999999999998 688877653

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.42  E-value=0.12  Score=45.32  Aligned_cols=119  Identities=13%  Similarity=0.093  Sum_probs=70.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      =.+++|.|+|+ |++|..++..|+..|.  .+++++++...   +....-++.+..... .++. +..  .+.   +   
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~---~~g~~~Dl~~~~~~~-~~~~-i~~--~~~---~---   69 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEK---AEGDAMDLSHAVPFT-SPTK-IYA--GDY---S---   69 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCch---hHHHHHHHHhhcccc-CCeE-EEe--CCH---H---
Confidence            35679999998 9999999999999988  79999987443   333333443321111 1222 221  111   1   


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                           .+..-|++|..||....  +  ..+.   ...++.|..-...+.+.+..+- .++.+++++-.
T Consensus        70 -----~~~~adivIitag~~~k--~--g~~R---~dll~~N~~i~~~i~~~i~~~~-~~~~vivvsNP  124 (315)
T PRK00066         70 -----DCKDADLVVITAGAPQK--P--GETR---LDLVEKNLKIFKSIVGEVMASG-FDGIFLVASNP  124 (315)
T ss_pred             -----HhCCCCEEEEecCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCc
Confidence                 12479999999998532  1  2233   3345666655555555444432 24667776653

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=96.36  E-value=0.042  Score=48.51  Aligned_cols=101  Identities=23%  Similarity=0.216  Sum_probs=62.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|++++|+|+ +++|..+++.+...|+ +|++++++.+..+.    +.+       .+..   ..+|..+.+    +.+.
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~----~~~-------~ga~---~~i~~~~~~----~~~~  232 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARREL----AEE-------LGAT---IVLDPTEVD----VVAE  232 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHH-------hCCC---EEECCCccC----HHHH
Confidence            5789999985 8999999999999999 78877665332221    111       1211   122333332    2223


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +.+..  +++|+++.+.|...                          ..+..+..++.+|+++.++...
T Consensus       233 l~~~~~~~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  275 (351)
T cd08233         233 VRKLTGGGGVDVSFDCAGVQA--------------------------TLDTAIDALRPRGTAVNVAIWE  275 (351)
T ss_pred             HHHHhCCCCCCEEEECCCCHH--------------------------HHHHHHHhccCCCEEEEEccCC
Confidence            33322  24999999987520                          1233445567789999988754

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.31  E-value=0.089  Score=46.64  Aligned_cols=35  Identities=23%  Similarity=0.273  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      .|+++||+| ++++|..++..+...|+ +|+++.++.
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~  212 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSP  212 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence            788999997 59999999998888999 888887653

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.30  E-value=0.032  Score=50.81  Aligned_cols=39  Identities=26%  Similarity=0.411  Sum_probs=34.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~   77 (272)
                      .++.+++++|.|+ |.+|..+++.|...| .+|++++|+..
T Consensus       176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~  215 (417)
T TIGR01035       176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYE  215 (417)
T ss_pred             CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence            3588999999997 999999999999999 68999988743

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.29  E-value=0.073  Score=46.45  Aligned_cols=121  Identities=14%  Similarity=0.099  Sum_probs=70.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCe--EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGAT--VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~--v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|.|+|++|.+|..++..|+..|..  |++++++. ..+.+.....++.+.....+...   .+..++  +...     
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~-~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~--d~~~-----   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK-SLEKLKGLRLDIYDALAAAGIDA---EIKISS--DLSD-----   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc-cccccccccchhhhchhccCCCc---EEEECC--CHHH-----
Confidence            37899999999999999999999874  99999853 22223222222221100011111   111111  1111     


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                         ...-|++|.++|....    ...+.   ...++.|+.-...+.+.+.+.. .++.++.+++.
T Consensus        70 ---l~~aDiViitag~p~~----~~~~r---~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~np  123 (309)
T cd05294          70 ---VAGSDIVIITAGVPRK----EGMSR---LDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNP  123 (309)
T ss_pred             ---hCCCCEEEEecCCCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence               2479999999998432    12232   3445667766666666665543 35778888775

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN02494 adenosylhomocysteinase

Probab=96.27  E-value=0.045  Score=50.10  Aligned_cols=36  Identities=31%  Similarity=0.496  Sum_probs=32.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      +.||+++|.|.+ .||+.+++.+...|++|+++++++
T Consensus       252 LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp  287 (477)
T PLN02494        252 IAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDP  287 (477)
T ss_pred             cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCc
Confidence            789999999976 899999999999999999998874

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.27  E-value=0.055  Score=46.29  Aligned_cols=35  Identities=31%  Similarity=0.396  Sum_probs=29.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVK   75 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~   75 (272)
                      ..|+++||.|+ |+||..+++.+...|++ |++++++
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~  154 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPS  154 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            46899999986 89999999988888997 7777665

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=96.24  E-value=0.069  Score=47.10  Aligned_cols=35  Identities=29%  Similarity=0.435  Sum_probs=29.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~   76 (272)
                      .|+++||+| .+++|..+++.+...|++ |+.++++.
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~  195 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINS  195 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCH
Confidence            588999997 599999999988889997 56676653

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.24  E-value=0.054  Score=46.39  Aligned_cols=162  Identities=17%  Similarity=0.135  Sum_probs=92.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.+++|++|+|.+|.-..+.---+|++|+.+.-.   .++..-..+++.      ..    .-.|-..+    .+.+.
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg---~eK~~~l~~~lG------fD----~~idyk~~----d~~~~  211 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGG---AEKCDFLTEELG------FD----AGIDYKAE----DFAQA  211 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCC---HHHHHHHHHhcC------Cc----eeeecCcc----cHHHH
Confidence            459999999999999987666555569999988665   333333332221      11    22344333    33444


Q ss_pred             HHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh---hHH
Q 039897          120 VVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP---EAR  195 (272)
Q Consensus       120 ~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~---~~~  195 (272)
                      +.+.. .+||+.+-|.|..                           +..++++.|+..+||+..+-++.+....   +.+
T Consensus       212 L~~a~P~GIDvyfeNVGg~---------------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~  264 (340)
T COG2130         212 LKEACPKGIDVYFENVGGE---------------------------VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPR  264 (340)
T ss_pred             HHHHCCCCeEEEEEcCCch---------------------------HHHHHHHhhccccceeeeeehhhcCCCCCCCCcc
Confidence            44443 4799999999872                           1234667888889999888877665542   233


Q ss_pred             HHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhh
Q 039897          196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       196 ~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                      .+..-+.+ -+++-    |++-++.+ ....++..+++..++..+....-+++.+.
T Consensus       265 ~l~~l~~k-r~~v~----Gfiv~~~~-~~~~~e~~~~l~~wv~~GKi~~~eti~dG  314 (340)
T COG2130         265 RLPLLMAK-RLRVQ----GFIVASDY-DQRFPEALRELGGWVKEGKIQYRETIVDG  314 (340)
T ss_pred             hhhHHHhh-hheeE----EEEechhh-hhhhHHHHHHHHHHHHcCceeeEeeehhh
Confidence            33333322 12332    33433333 22334555555555555555555555543

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.24  E-value=0.06  Score=40.77  Aligned_cols=33  Identities=27%  Similarity=0.438  Sum_probs=26.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      +++|+|.| .|++|..+++.|+..|. ++.++|.+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCc
Confidence            56788887 57899999999999999 68888753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.24  E-value=0.011  Score=44.49  Aligned_cols=94  Identities=14%  Similarity=0.116  Sum_probs=51.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cccchhhhHHHHHHHHHHhhh-cCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTY-VKSQEEKDAQETLEILREAKT-SDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~-r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .-+|-|+|+ |.+|.++++.|.+.|+.|..++ |+.++.+++...+........ ..-.....+-+-+.| +.+..++++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence            347889998 8899999999999999988775 443333333332211110000 011223334444444 478888888


Q ss_pred             HHHh--cCCccEEEEccccc
Q 039897          120 VVNA--YGKIDILVNNAAVQ  137 (272)
Q Consensus       120 ~~~~--~g~ld~vI~~ag~~  137 (272)
                      +...  +.+=.+|+|+.|-.
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            8765  33335899999974

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN02827 Alcohol dehydrogenase-like

Probab=96.23  E-value=0.082  Score=47.41  Aligned_cols=80  Identities=15%  Similarity=0.155  Sum_probs=48.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh-HHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD-ENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~  117 (272)
                      ..|+++||+|+ |+||..+++.+...|++ |++++++.++.+.    +.+       .+.. .+  .|..+. ++..+.+
T Consensus       192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~----a~~-------lGa~-~~--i~~~~~~~~~~~~v  256 (378)
T PLN02827        192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEK----AKT-------FGVT-DF--INPNDLSEPIQQVI  256 (378)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH----HHH-------cCCc-EE--EcccccchHHHHHH
Confidence            45899999985 99999999988888985 6666655332211    111       2221 12  233321 2344444


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      .++..  +++|++|.+.|.
T Consensus       257 ~~~~~--~g~d~vid~~G~  273 (378)
T PLN02827        257 KRMTG--GGADYSFECVGD  273 (378)
T ss_pred             HHHhC--CCCCEEEECCCC
Confidence            43322  369999999885

>PLN00203 glutamyl-tRNA reductase

Probab=96.22  E-value=0.035  Score=51.76  Aligned_cols=39  Identities=13%  Similarity=0.240  Sum_probs=34.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccch
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQE   78 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~   78 (272)
                      +|.+++++|.|+ |++|..++++|...|+ +|+++.|+...
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~er  302 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEER  302 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHH
Confidence            388999999999 9999999999999997 69899887443

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.22  E-value=0.011  Score=45.17  Aligned_cols=40  Identities=30%  Similarity=0.311  Sum_probs=36.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .+++||.++|.|.+.-+|+.++..|.++|++|.++.++..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            5799999999999999999999999999999999987543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.20  E-value=0.074  Score=39.61  Aligned_cols=90  Identities=17%  Similarity=0.206  Sum_probs=58.5

Q ss_pred             chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhcC--CccEE
Q 039897           53 GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYG--KIDIL  130 (272)
Q Consensus        53 gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~ld~v  130 (272)
                      |||...+..+...|++|++++++..+.+.+    .   +    .+  +. ..+|-.+.+    +.+++.+..+  ++|++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~----~---~----~G--a~-~~~~~~~~~----~~~~i~~~~~~~~~d~v   62 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA----K---E----LG--AD-HVIDYSDDD----FVEQIRELTGGRGVDVV   62 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHH----H---H----TT--ES-EEEETTTSS----HHHHHHHHTTTSSEEEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHH----H---h----hc--cc-ccccccccc----cccccccccccccceEE
Confidence            689999999999999999999874433222    1   1    22  11 223333333    4555555443  69999


Q ss_pred             EEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          131 VNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       131 I~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      |.|+|...                          ..+..+..++++|++++++...
T Consensus        63 id~~g~~~--------------------------~~~~~~~~l~~~G~~v~vg~~~   92 (130)
T PF00107_consen   63 IDCVGSGD--------------------------TLQEAIKLLRPGGRIVVVGVYG   92 (130)
T ss_dssp             EESSSSHH--------------------------HHHHHHHHEEEEEEEEEESSTS
T ss_pred             EEecCcHH--------------------------HHHHHHHHhccCCEEEEEEccC
Confidence            99998511                          2233446678899999999876

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.20  E-value=0.055  Score=46.71  Aligned_cols=118  Identities=19%  Similarity=0.160  Sum_probs=68.9

Q ss_pred             CCCCCCCCCCCCC---CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCce
Q 039897           25 PTPQFTSHDYKPS---NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM  101 (272)
Q Consensus        25 ~~~~~~~~~~~~~---~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (272)
                      |-.+.=+.=|++.   ..-.|+++.|+|+.| ||.--++.--..|++|+++++..++.+++-+   .+       +.+. 
T Consensus       162 PlLCaGITvYspLk~~g~~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~---~L-------GAd~-  229 (360)
T KOG0023|consen  162 PLLCAGITVYSPLKRSGLGPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK---SL-------GADV-  229 (360)
T ss_pred             chhhcceEEeehhHHcCCCCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH---hc-------Ccce-
Confidence            4444444445543   223799999999988 9976666555669999999998654444332   21       2222 


Q ss_pred             EEeccCC-ChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEE
Q 039897          102 AISADLG-FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII  180 (272)
Q Consensus       102 ~~~~D~~-~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv  180 (272)
                        .+|.+ +++.++++.+..   .+.+|.++|.+-     .++                       ...+.+||.+|++|
T Consensus       230 --fv~~~~d~d~~~~~~~~~---dg~~~~v~~~a~-----~~~-----------------------~~~~~~lk~~Gt~V  276 (360)
T KOG0023|consen  230 --FVDSTEDPDIMKAIMKTT---DGGIDTVSNLAE-----HAL-----------------------EPLLGLLKVNGTLV  276 (360)
T ss_pred             --eEEecCCHHHHHHHHHhh---cCcceeeeeccc-----cch-----------------------HHHHHHhhcCCEEE
Confidence              23445 555555555431   134454444311     111                       11345667889999


Q ss_pred             EecCCCC
Q 039897          181 NTTSVEP  187 (272)
Q Consensus       181 ~vsS~~~  187 (272)
                      +++-...
T Consensus       277 ~vg~p~~  283 (360)
T KOG0023|consen  277 LVGLPEK  283 (360)
T ss_pred             EEeCcCC
Confidence            9987654

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.16  E-value=0.022  Score=51.90  Aligned_cols=39  Identities=28%  Similarity=0.412  Sum_probs=34.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccch
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQE   78 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~   78 (272)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+...
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~r  218 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLER  218 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHH
Confidence            588999999987 9999999999999998 78889887443

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.16  E-value=0.021  Score=49.20  Aligned_cols=37  Identities=32%  Similarity=0.373  Sum_probs=33.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+++++|+|+++++|.++++.+...|++|+.+.++.
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~  174 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSD  174 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            3588999999999999999999999999999887763

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.13  E-value=0.038  Score=43.98  Aligned_cols=32  Identities=19%  Similarity=0.311  Sum_probs=27.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      +|+|.| .||+|..+++.|+..|. ++.++|.+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            377888 48999999999999999 599998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.08  E-value=0.012  Score=54.41  Aligned_cols=38  Identities=21%  Similarity=0.280  Sum_probs=33.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .++++++++|+|+ ||+|++++..|++.|++|++++|+.
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~  365 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTK  365 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            3578899999996 7999999999999999999998874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.08  E-value=0.034  Score=40.69  Aligned_cols=71  Identities=23%  Similarity=0.193  Sum_probs=48.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAY  124 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (272)
                      |+|.|. +.+|+.+++.|.+.+.+|++++.+++..+.+       .+    .+  ..++..|.++++.++++--      
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-------~~----~~--~~~i~gd~~~~~~l~~a~i------   60 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL-------RE----EG--VEVIYGDATDPEVLERAGI------   60 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-------HH----TT--SEEEES-TTSHHHHHHTTG------
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-------Hh----cc--cccccccchhhhHHhhcCc------
Confidence            567777 5799999999999777999999984432222       11    22  6789999999887665522      


Q ss_pred             CCccEEEEccc
Q 039897          125 GKIDILVNNAA  135 (272)
Q Consensus       125 g~ld~vI~~ag  135 (272)
                      ...+.+|....
T Consensus        61 ~~a~~vv~~~~   71 (116)
T PF02254_consen   61 EKADAVVILTD   71 (116)
T ss_dssp             GCESEEEEESS
T ss_pred             cccCEEEEccC
Confidence            35677766554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK08223 hypothetical protein; Validated

Probab=96.06  E-value=0.038  Score=47.41  Aligned_cols=37  Identities=19%  Similarity=0.255  Sum_probs=31.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      ..|++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            4588999999985 5899999999999998 68887765

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.04  E-value=0.14  Score=45.68  Aligned_cols=35  Identities=26%  Similarity=0.223  Sum_probs=29.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .|++|||.|+ |+||..++..+...|++|++++.+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~  217 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSS  217 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            6889999765 8999999998888899988877653

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.04  E-value=0.054  Score=47.53  Aligned_cols=120  Identities=10%  Similarity=0.006  Sum_probs=68.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ++|.|+|++|.+|..++..|+..|.       .+++++++... +.+....-++.+.......++.     ++.      
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~-~~a~g~a~Dl~~~~~~~~~~~~-----i~~------   70 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQAL-KALEGVAMELEDCAFPLLAEIV-----ITD------   70 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcc-cccceeehhhhhccccccCceE-----Eec------
Confidence            4899999999999999999998876       68999885322 1111111222211000001111     110      


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                         ...+....-|+||.+||....  +  ..+.   .+.+..|+.-.-.+...+..+-.+.+.++.+|-
T Consensus        71 ---~~~~~~~daDivvitaG~~~k--~--g~tR---~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (322)
T cd01338          71 ---DPNVAFKDADWALLVGAKPRG--P--GMER---ADLLKANGKIFTAQGKALNDVASRDVKVLVVGN  129 (322)
T ss_pred             ---CcHHHhCCCCEEEEeCCCCCC--C--CCcH---HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC
Confidence               112223479999999998432  2  2233   334677776666666666554323566777765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.04  E-value=0.029  Score=56.29  Aligned_cols=78  Identities=19%  Similarity=0.268  Sum_probs=56.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC-Ce-------------EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEec
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEG-AT-------------VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA  105 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G-~~-------------v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (272)
                      -..|.|+|.|+ |.||...++.|++.+ +.             |.+++++.+.   .++..+.        -.++..+.+
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~---a~~la~~--------~~~~~~v~l  634 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKD---AKETVEG--------IENAEAVQL  634 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHH---HHHHHHh--------cCCCceEEe
Confidence            34679999997 999999999998753 23             7777776433   3222221        124678899


Q ss_pred             cCCChHHHHHHHHHHHHhcCCccEEEEcccc
Q 039897          106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       106 D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      |++|.+++.++++       .+|+||++...
T Consensus       635 Dv~D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        635 DVSDSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             ecCCHHHHHHhhc-------CCCEEEECCCc
Confidence            9999888777765       59999999875

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.03  E-value=0.024  Score=48.64  Aligned_cols=49  Identities=24%  Similarity=0.386  Sum_probs=38.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLE   87 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~   87 (272)
                      .+..++.++|.|+ ||-+++++..|++.|+ +++++.|+.++.+++.+.+.
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~  171 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG  171 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            4567899999996 5669999999999996 79999998666555555443

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.03  E-value=0.017  Score=45.17  Aligned_cols=39  Identities=31%  Similarity=0.399  Sum_probs=32.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+++||+++|.|.|.-+|+.++..|.++|++|.++....
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T   70 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT   70 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence            469999999999999999999999999999999987764

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.02  E-value=0.059  Score=41.20  Aligned_cols=31  Identities=23%  Similarity=0.369  Sum_probs=26.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      +|+|.|. ||+|.++++.|+..|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4788886 8999999999999998 68888755

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.00  E-value=0.057  Score=48.33  Aligned_cols=37  Identities=24%  Similarity=0.405  Sum_probs=32.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      ..|++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4588999999986 6899999999999997 78888765

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.97  E-value=0.076  Score=46.78  Aligned_cols=93  Identities=19%  Similarity=0.210  Sum_probs=55.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..|.|+++.|.|. |.||+++|+.|...|++|++.++++............+.+..  ....+.++.+..+.  +...++
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell--~~aDiVil~lP~t~--~t~~li  216 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAI--KDADIISLHVPANK--ESYHLF  216 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHH--hcCCEEEEeCCCcH--HHHHHH
Confidence            4689999999975 779999999999999999999987543221111111122111  34456666665553  222233


Q ss_pred             -HHHHHhcCCccEEEEcccc
Q 039897          118 -DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 -~~~~~~~g~ld~vI~~ag~  136 (272)
                       +.+.... +.+.++-|++-
T Consensus       217 ~~~~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        217 DKAMFDHV-KKGAILVNAAR  235 (330)
T ss_pred             hHHHHhcC-CCCcEEEEcCC
Confidence             3333332 34556556554

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.95  E-value=0.052  Score=49.82  Aligned_cols=38  Identities=26%  Similarity=0.286  Sum_probs=33.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      ++.+|+++|+|.+ ++|.++++.|+++|++|++.+....
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            3678999999986 8999999999999999999987643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.94  E-value=0.026  Score=51.83  Aligned_cols=34  Identities=15%  Similarity=0.248  Sum_probs=30.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      +++|.|+ |.+|+.+++.|.++|+.|++++++++.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~   35 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER   35 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence            6888987 999999999999999999999987544

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.93  E-value=0.032  Score=48.65  Aligned_cols=117  Identities=17%  Similarity=0.121  Sum_probs=66.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+|++|.+|..+|..|+..|.  .+++++++... ...    -++.+    .........+.  +.++       ..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~a----~DL~~----~~~~~~i~~~~--~~~~-------~~   62 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GVA----ADLSH----IPTAASVKGFS--GEEG-------LE   62 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EEE----chhhc----CCcCceEEEec--CCCc-------hH
Confidence            478999999999999999998876  68999887411 111    11111    00011111100  0001       12


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +.+..-|++|.+||....  +  ..+.   .+.+..|+.-.-.+.+.+..+ ..++.|++++-..
T Consensus        63 ~~~~daDivvitaG~~~~--~--g~~R---~dll~~N~~I~~~i~~~i~~~-~p~~iiivvsNPv  119 (312)
T TIGR01772        63 NALKGADVVVIPAGVPRK--P--GMTR---DDLFNVNAGIVKDLVAAVAES-CPKAMILVITNPV  119 (312)
T ss_pred             HHcCCCCEEEEeCCCCCC--C--CccH---HHHHHHhHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence            234579999999998432  2  2222   334667776555555555544 3356777777654

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.92  E-value=0.037  Score=47.76  Aligned_cols=37  Identities=32%  Similarity=0.318  Sum_probs=33.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+++++|+|+++++|.+++..+...|++++.++++.
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~  179 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTS  179 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence            3578999999999999999999999999999987764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.92  E-value=0.048  Score=47.53  Aligned_cols=117  Identities=15%  Similarity=0.102  Sum_probs=69.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+|++|.+|..+|..|+..|.  .+++++.+ ...    ...-++.+.    ........+.  ..++       +.
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~----g~alDL~~~----~~~~~i~~~~--~~~~-------~y   63 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTP----GVAADLSHI----NTPAKVTGYL--GPEE-------LK   63 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccc----eeehHhHhC----CCcceEEEec--CCCc-------hH
Confidence            689999999999999999998884  79999886 211    111112211    1111111110  0011       12


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +.+..-|++|.+||....  +  ..+.   .+.++.|..-...+.+.+..+ ...+.+++++-..
T Consensus        64 ~~~~daDivvitaG~~~k--~--g~tR---~dll~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv  120 (310)
T cd01337          64 KALKGADVVVIPAGVPRK--P--GMTR---DDLFNINAGIVRDLATAVAKA-CPKALILIISNPV  120 (310)
T ss_pred             HhcCCCCEEEEeCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCch
Confidence            223579999999998532  2  2233   345677777777777766665 3457777777654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.92  E-value=0.051  Score=48.77  Aligned_cols=36  Identities=17%  Similarity=0.134  Sum_probs=30.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~   76 (272)
                      ..++|.|.||+|.+|.++.+.|.++ ..++..+.++.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~   73 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADR   73 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChh
Confidence            4468999999999999999999999 66888877753

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.90  E-value=0.1  Score=45.70  Aligned_cols=36  Identities=19%  Similarity=0.277  Sum_probs=32.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+.++||.|+++++|.++++.+...|++|+.+.++.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~  200 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGD  200 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence            479999999999999999999999999999987764

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK07574 formate dehydrogenase; Provisional

Probab=95.88  E-value=0.039  Score=49.54  Aligned_cols=117  Identities=18%  Similarity=0.215  Sum_probs=72.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|.||++.|.|. |.||+++|+.|...|++|+..+|.....+.. +            ..       ++.-..+++++
T Consensus       187 ~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~------------~~-------g~~~~~~l~el  245 (385)
T PRK07574        187 SYDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-Q------------EL-------GLTYHVSFDSL  245 (385)
T ss_pred             ceecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhH-h------------hc-------CceecCCHHHH
Confidence            35699999999987 6799999999999999999988864221110 0            00       11111234444


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.......           +.          .+....+..|+++..+||++-.....    ..+
T Consensus       246 l~-------~aDvV~l~lPlt~~T-----------~~----------li~~~~l~~mk~ga~lIN~aRG~iVD----e~A  293 (385)
T PRK07574        246 VS-------VCDVVTIHCPLHPET-----------EH----------LFDADVLSRMKRGSYLVNTARGKIVD----RDA  293 (385)
T ss_pred             hh-------cCCEEEEcCCCCHHH-----------HH----------HhCHHHHhcCCCCcEEEECCCCchhh----HHH
Confidence            43       579998877652210           11          12356677888888888888754332    455


Q ss_pred             HHHHHhhCCe
Q 039897          197 LALQLVERGI  206 (272)
Q Consensus       197 la~e~~~~gi  206 (272)
                      |...+....|
T Consensus       294 L~~AL~sG~i  303 (385)
T PRK07574        294 VVRALESGHL  303 (385)
T ss_pred             HHHHHHhCCc
Confidence            5555554433

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.87  E-value=0.017  Score=49.52  Aligned_cols=39  Identities=28%  Similarity=0.354  Sum_probs=36.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+++||+++|+|.+.-+|+.++..|.++|++|.++.++.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            479999999999999999999999999999999998763

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.86  E-value=0.18  Score=44.13  Aligned_cols=36  Identities=22%  Similarity=0.236  Sum_probs=31.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .++++||.| ++++|.+++..+...|++|+.++++.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~  198 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSD  198 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChH
Confidence            578999999 899999999999899999999888633

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.85  E-value=0.046  Score=50.16  Aligned_cols=63  Identities=19%  Similarity=0.246  Sum_probs=45.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +..++++|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+           ......++..|.++.+.++
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~-----------~~~~~~~i~gd~~~~~~L~  291 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE-----------ELPNTLVLHGDGTDQELLE  291 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-----------HCCCCeEEECCCCCHHHHH
Confidence            45789999998 999999999999999999999887443222221           1224556777877765543

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.83  E-value=0.14  Score=45.97  Aligned_cols=34  Identities=24%  Similarity=0.192  Sum_probs=30.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .|++++|.|+ |++|..+++.....|++|++++.+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~  211 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRS  211 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCC
Confidence            5889999986 899999999888899999888775

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.83  E-value=0.07  Score=46.74  Aligned_cols=41  Identities=17%  Similarity=0.045  Sum_probs=33.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQE   84 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~   84 (272)
                      ++|.|.|+ |-+|..+|..|+..|++|++.++++...+...+
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~   48 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRA   48 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            46778875 789999999999999999999998665544433

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.81  E-value=0.016  Score=49.92  Aligned_cols=40  Identities=25%  Similarity=0.335  Sum_probs=37.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      -++.||+|+|.|.++-+|+.++..|.++|++|.++.++..
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            5799999999999999999999999999999999977644

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.81  E-value=0.047  Score=47.68  Aligned_cols=39  Identities=28%  Similarity=0.452  Sum_probs=32.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccch
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQE   78 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~   78 (272)
                      ++.+++|+|.|+ |.+|..+++.|.+.| .+|++++|+.+.
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~r  214 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYER  214 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence            478999999987 999999999999877 468888887433

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.81  E-value=0.085  Score=46.06  Aligned_cols=112  Identities=21%  Similarity=0.283  Sum_probs=71.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|.||++.|.|- |.||+++|+.+...|.+|+..++.....                 ...   +.     ..++++++
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----------------~~~---~~-----~~~l~ell  194 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNK-----------------NEE---YE-----RVSLEELL  194 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCcccc-----------------ccC---ce-----eecHHHHh
Confidence            4799999999985 8999999999999999999887742110                 000   11     12345555


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHH
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGL  197 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~l  197 (272)
                      .       .-|+|+.+........                     -.+.+..+..||++..+||++=.....    -.+|
T Consensus       195 ~-------~sDvv~lh~Plt~~T~---------------------~li~~~~~~~Mk~~a~lIN~aRG~vVD----e~AL  242 (311)
T PRK08410        195 K-------TSDIISIHAPLNEKTK---------------------NLIAYKELKLLKDGAILINVGRGGIVN----EKDL  242 (311)
T ss_pred             h-------cCCEEEEeCCCCchhh---------------------cccCHHHHHhCCCCeEEEECCCccccC----HHHH
Confidence            4       4688877665532211                     223345667789888899988643332    4555


Q ss_pred             HHHHhhCCeE
Q 039897          198 ALQLVERGIR  207 (272)
Q Consensus       198 a~e~~~~gi~  207 (272)
                      ...+....|.
T Consensus       243 ~~AL~~g~i~  252 (311)
T PRK08410        243 AKALDEKDIY  252 (311)
T ss_pred             HHHHHcCCeE
Confidence            5555554454

>PRK05442 malate dehydrogenase; Provisional

Probab=95.80  E-value=0.053  Score=47.62  Aligned_cols=121  Identities=12%  Similarity=0.049  Sum_probs=69.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ++|.|+|++|.+|..++..|+..|.       .+++++++... +.+....-++.+.......++. +    +       
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~-~~~~g~a~Dl~~~~~~~~~~~~-i----~-------   71 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPAL-KALEGVVMELDDCAFPLLAGVV-I----T-------   71 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcc-cccceeehhhhhhhhhhcCCcE-E----e-------
Confidence            4899999999999999999988765       68888885321 1112112222211100001111 1    1       


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        ....+....-|++|.+||....  +  ..+.   .+.+..|+.-.-.+.+.+..+-...+.++.+|-.
T Consensus        72 --~~~y~~~~daDiVVitaG~~~k--~--g~tR---~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNP  132 (326)
T PRK05442         72 --DDPNVAFKDADVALLVGARPRG--P--GMER---KDLLEANGAIFTAQGKALNEVAARDVKVLVVGNP  132 (326)
T ss_pred             --cChHHHhCCCCEEEEeCCCCCC--C--CCcH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence              0112233579999999998432  2  2233   4456677766666666665543345677777753

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.79  E-value=0.0088  Score=43.18  Aligned_cols=38  Identities=29%  Similarity=0.335  Sum_probs=32.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+++||++||+|| |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4789999999998 8899999999999999999998863

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.79  E-value=0.057  Score=43.85  Aligned_cols=37  Identities=24%  Similarity=0.427  Sum_probs=30.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      ..|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4588899999975 5599999999999998 48788754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.77  E-value=0.063  Score=46.76  Aligned_cols=31  Identities=26%  Similarity=0.411  Sum_probs=26.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      +|||.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3788885 8999999999999998 58887754

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK07877 hypothetical protein; Provisional

Probab=95.71  E-value=0.046  Score=52.94  Aligned_cols=86  Identities=22%  Similarity=0.278  Sum_probs=53.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchh---------------hhHHHHHHHHHHhhhcCCCCc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEE---------------KDAQETLEILREAKTSDAKDP  100 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~---------------~~~~~~~~~~~~~~~~~~~~~  100 (272)
                      ..|++++|+|.|. | +|..++..|+..|.  ++++++.+.=+.               .+.....+.+.+.  +...++
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~i--np~i~v  178 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAEL--DPYLPV  178 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHH--CCCCEE
Confidence            4589999999999 4 99999999999994  888887643111               1111112222221  145566


Q ss_pred             eEEeccCCChHHHHHHHHHHHHhcCCccEEEEccc
Q 039897          101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAA  135 (272)
Q Consensus       101 ~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag  135 (272)
                      ..+...++ .+.+.++++       +.|+||.|.-
T Consensus       179 ~~~~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        179 EVFTDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             EEEeccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            66666665 445555543       4777777664

>PRK04148 hypothetical protein; Provisional

Probab=95.70  E-value=0.022  Score=43.08  Aligned_cols=35  Identities=17%  Similarity=0.077  Sum_probs=30.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      +++++++.|.+  .|.++|..|.+.|++|+.++.++.
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~   50 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEK   50 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHH
Confidence            45789999987  788889999999999999999854

>TIGR00936 ahcY adenosylhomocysteinase

Probab=95.69  E-value=0.14  Score=46.19  Aligned_cols=38  Identities=29%  Similarity=0.275  Sum_probs=33.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .+.|++++|.| .|.||+.+++.+...|++|+++++++.
T Consensus       192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~  229 (406)
T TIGR00936       192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPI  229 (406)
T ss_pred             CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChh
Confidence            47899999999 567999999999999999999988753

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.69  E-value=0.067  Score=47.73  Aligned_cols=80  Identities=18%  Similarity=0.156  Sum_probs=49.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~  117 (272)
                      -.|.++||+|+ |+||...+..+...|+ +|+.++++.++.+.+    .+       .+..   ..+|..+ .+++.+.+
T Consensus       184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a----~~-------~Ga~---~~i~~~~~~~~~~~~v  248 (368)
T TIGR02818       184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA----KK-------LGAT---DCVNPNDYDKPIQEVI  248 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HH-------hCCC---eEEcccccchhHHHHH
Confidence            34889999985 8999999998888899 688887764332222    11       1211   1223332 22333333


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      .++..  +++|++|.++|.
T Consensus       249 ~~~~~--~g~d~vid~~G~  265 (368)
T TIGR02818       249 VEITD--GGVDYSFECIGN  265 (368)
T ss_pred             HHHhC--CCCCEEEECCCC
Confidence            33322  379999999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.67  E-value=0.14  Score=46.15  Aligned_cols=117  Identities=15%  Similarity=0.134  Sum_probs=64.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ..|+++|| +|.|+||..++..+...|++++++ ++++++.+.    +   ++    .+.  ..  ++.....+..+.+.
T Consensus       184 ~~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~----a---~~----~Ga--~~--v~~~~~~~~~~~v~  247 (393)
T TIGR02819       184 GPGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ----A---RS----FGC--ET--VDLSKDATLPEQIE  247 (393)
T ss_pred             CCCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHH----H---HH----cCC--eE--EecCCcccHHHHHH
Confidence            45889999 556999999999888889986654 343222111    1   11    222  21  23322222333233


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      ++.. ..++|++|.+.|....... .+.    ..       ...-...+..+..++++|+|+.++..
T Consensus       248 ~~~~-~~g~Dvvid~~G~~~~~~~-~~~----~~-------~~~~~~~~~~~~~~~~~G~i~~~G~~  301 (393)
T TIGR02819       248 QILG-EPEVDCAVDCVGFEARGHG-HDG----KK-------EAPATVLNSLMEVTRVGGAIGIPGLY  301 (393)
T ss_pred             HHcC-CCCCcEEEECCCCcccccc-ccc----cc-------cchHHHHHHHHHHhhCCCEEEEeeec
Confidence            2221 1359999999997321000 000    00       12223445556777889999999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK08328 hypothetical protein; Provisional

Probab=95.65  E-value=0.098  Score=43.62  Aligned_cols=37  Identities=27%  Similarity=0.367  Sum_probs=31.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      ..|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4588899999985 5899999999999998 58888755

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.64  E-value=0.08  Score=47.20  Aligned_cols=80  Identities=16%  Similarity=0.109  Sum_probs=50.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh-HHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD-ENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~  117 (272)
                      -.|.++||.|+ |+||...++.+...|+ +|+.++++.++.+.+    .+       .+.. .+  .|..+. +++.+.+
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~----~~-------lGa~-~~--i~~~~~~~~~~~~v  249 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA----KK-------FGAT-DC--VNPKDHDKPIQQVL  249 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HH-------cCCC-EE--EcccccchHHHHHH
Confidence            35899999975 8999999999989999 688888874432221    11       1221 12  233332 2344444


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      .++..  +++|+++.+.|.
T Consensus       250 ~~~~~--~g~d~vid~~g~  266 (368)
T cd08300         250 VEMTD--GGVDYTFECIGN  266 (368)
T ss_pred             HHHhC--CCCcEEEECCCC
Confidence            44332  479999998874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.64  E-value=0.42  Score=43.69  Aligned_cols=119  Identities=9%  Similarity=-0.037  Sum_probs=72.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-------CC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE-------GA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~-------G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      -+|.|+|++|.+|.+++..|+..       |.  ++++++++.+..   +-..-++.+.......++ .+..+  +.   
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a---~G~amDL~daa~~~~~~v-~i~~~--~y---  171 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQAL---EGVAMELEDSLYPLLREV-SIGID--PY---  171 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchh---HHHHHHHHHhhhhhcCce-EEecC--CH---
Confidence            47899999999999999999987       65  688888875443   333333332210011111 11111  11   


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                              +.+..-|++|..||....  +  ..+.   .+.++.|+.-.-.+.+.+..+-..++.||.+|-.
T Consensus       172 --------e~~kdaDiVVitAG~prk--p--G~tR---~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNP  228 (444)
T PLN00112        172 --------EVFQDAEWALLIGAKPRG--P--GMER---ADLLDINGQIFAEQGKALNEVASRNVKVIVVGNP  228 (444)
T ss_pred             --------HHhCcCCEEEECCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCc
Confidence                    123479999999998432  2  2233   3456777776666666666543446777777753

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.63  E-value=0.26  Score=43.23  Aligned_cols=119  Identities=11%  Similarity=0.056  Sum_probs=70.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +|.|+|++|.+|..++..|...|.       .+++++++... +.+....-++.+.......+.. +..           
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~-~~a~g~a~Dl~~~~~~~~~~~~-i~~-----------   71 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAM-KALEGVAMELEDCAFPLLAGVV-ATT-----------   71 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcc-cccchHHHHHhhccccccCCcE-Eec-----------
Confidence            789999999999999999998875       78999886321 1222222233221100001111 110           


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                        ...+....-|+||.+||....  +  ..+.   .+.+..|+.-.-.+.+.+..+-.+++.++.+|-
T Consensus        72 --~~~~~~~daDvVVitAG~~~k--~--g~tR---~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        72 --DPEEAFKDVDAALLVGAFPRK--P--GMER---ADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             --ChHHHhCCCCEEEEeCCCCCC--C--CCcH---HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence              111223468999999998432  2  2233   445777777777777766665333567777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.63  E-value=0.058  Score=46.76  Aligned_cols=37  Identities=30%  Similarity=0.336  Sum_probs=33.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~  178 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPA  178 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4789999999999999999999999999988877643

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.61  E-value=0.053  Score=47.01  Aligned_cols=36  Identities=19%  Similarity=0.237  Sum_probs=32.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .|.++||.|+++++|.++++.+...|++++.+..+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~  174 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRD  174 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCH
Confidence            578999999999999999999999999998887763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.59  E-value=0.058  Score=46.90  Aligned_cols=37  Identities=27%  Similarity=0.293  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .++++||.|+++++|.++++.+...|++|+.+.++.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKAD  182 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHH
Confidence            3679999999999999999999999999998877643

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.58  E-value=0.022  Score=46.45  Aligned_cols=37  Identities=19%  Similarity=0.211  Sum_probs=33.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .+++||.+||.|| |.+|...++.|.+.|++|+++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            5699999999998 889999999999999999998754

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.57  E-value=0.061  Score=46.20  Aligned_cols=37  Identities=27%  Similarity=0.320  Sum_probs=33.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+.+++|+|+++++|.+++..+...|++|+.+.++.
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~  174 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSE  174 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCH
Confidence            3578999999999999999999999999999887764

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.55  E-value=0.11  Score=43.64  Aligned_cols=38  Identities=21%  Similarity=0.392  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      ..|++++|+|.|+ ||+|..+++.|+..|. +++++|.+.
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            3588899999975 6899999999999997 677777653

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.54  E-value=0.03  Score=43.78  Aligned_cols=91  Identities=21%  Similarity=0.220  Sum_probs=53.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHH----HHhhhcCCCCceEEeccCCChHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL----REAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      ..+++||.+||.|| |.+|...++.|.+.|++|.+++..  -.+.+.+ +..+    +......-.+. .+-+-.|+.++
T Consensus         8 ~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~--~~~~l~~-l~~i~~~~~~~~~~dl~~a-~lViaaT~d~e   82 (157)
T PRK06719          8 MFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE--ICKEMKE-LPYITWKQKTFSNDDIKDA-HLIYAATNQHA   82 (157)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc--cCHHHHh-ccCcEEEecccChhcCCCc-eEEEECCCCHH
Confidence            46799999999995 568999999999999999988532  2222222 1000    00000001111 22333567777


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccc
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      ++..+....+..    .++|++.-
T Consensus        83 ~N~~i~~~a~~~----~~vn~~d~  102 (157)
T PRK06719         83 VNMMVKQAAHDF----QWVNVVSD  102 (157)
T ss_pred             HHHHHHHHHHHC----CcEEECCC
Confidence            777777766542    35665543

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.54  E-value=0.028  Score=48.10  Aligned_cols=38  Identities=21%  Similarity=0.372  Sum_probs=35.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      -++.||.|+|.|.|.-+|+.++..|.++|++|.++...
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            57999999999999999999999999999999998654

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.54  E-value=0.071  Score=46.43  Aligned_cols=37  Identities=27%  Similarity=0.321  Sum_probs=32.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+.+++|.|+++++|.++++.....|++|+.+.++.
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~  174 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSD  174 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcH
Confidence            4588999999999999999998888999998887763

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14851 hypothetical protein; Provisional

Probab=95.53  E-value=0.078  Score=51.13  Aligned_cols=36  Identities=14%  Similarity=0.197  Sum_probs=31.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEec
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYV   74 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r   74 (272)
                      ..|++++|+|.| .||+|..++..|+..|. ++.++|.
T Consensus        39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~   75 (679)
T PRK14851         39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADF   75 (679)
T ss_pred             HHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcC
Confidence            458899999998 67999999999999998 5777764

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.53  E-value=0.088  Score=45.38  Aligned_cols=37  Identities=32%  Similarity=0.359  Sum_probs=33.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      -.|.++||.|+++++|.++++.+...|++|+.+..+.
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~  177 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSP  177 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence            4588999999999999999999999999998887763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.53  E-value=0.11  Score=42.21  Aligned_cols=37  Identities=27%  Similarity=0.492  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~   75 (272)
                      ..|++.+|+|.|.++ +|.++++.|+..|.. +.+++.+
T Consensus        15 ~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            458889999998765 999999999999985 8888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.49  E-value=0.89  Score=39.90  Aligned_cols=38  Identities=16%  Similarity=0.225  Sum_probs=32.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccch
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQE   78 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~   78 (272)
                      ++.++|.|+| +|.+|..++..++..|. +++++++++..
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~   42 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNI   42 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCch
Confidence            4457899999 58899999999999995 89999998654

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.49  E-value=0.19  Score=40.93  Aligned_cols=76  Identities=21%  Similarity=0.212  Sum_probs=47.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHH-------HhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR-------EAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ....||+|.||.+++++|++.|++|++.+|+.++............       +..  ....+.++.+-.   +.+...+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~--~~aDVVvLAVP~---~a~~~v~   77 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAA--ALADVVVLAVPF---EAIPDVL   77 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHH--hcCCEEEEeccH---HHHHhHH
Confidence            4567889999999999999999999999776554322222111110       000  234455555544   4566677


Q ss_pred             HHHHHhcC
Q 039897          118 DEVVNAYG  125 (272)
Q Consensus       118 ~~~~~~~g  125 (272)
                      .++.+.++
T Consensus        78 ~~l~~~~~   85 (211)
T COG2085          78 AELRDALG   85 (211)
T ss_pred             HHHHHHhC
Confidence            77777665

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.48  E-value=0.32  Score=42.29  Aligned_cols=117  Identities=19%  Similarity=0.220  Sum_probs=67.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|.|+|+ |+||.+++..|+.++.  .+++.+++....   +-..-++.+...-.... ..+..| .+.+         
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~---~G~a~DL~~~~~~~~~~-~~i~~~-~~y~---------   65 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKA---EGVALDLSHAAAPLGSD-VKITGD-GDYE---------   65 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccc---cchhcchhhcchhccCc-eEEecC-CChh---------
Confidence            47899999 9999999999988765  699999983322   22222222211101111 112222 1111         


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                        ...+-|++|-.||.....+    .+.   .+.+..|..-.-.+.+.+..+-. ++.++.++-
T Consensus        66 --~~~~aDiVvitAG~prKpG----mtR---~DLl~~Na~I~~~i~~~i~~~~~-d~ivlVvtN  119 (313)
T COG0039          66 --DLKGADIVVITAGVPRKPG----MTR---LDLLEKNAKIVKDIAKAIAKYAP-DAIVLVVTN  119 (313)
T ss_pred             --hhcCCCEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHHhhCC-CeEEEEecC
Confidence              1247999999999865432    333   33466777766677776665533 455555554

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.47  E-value=0.042  Score=43.94  Aligned_cols=44  Identities=23%  Similarity=0.320  Sum_probs=35.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI   88 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~   88 (272)
                      +|.|.|+ |-+|..+|..|+..|++|.+.+++++..+...+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4778888 9999999999999999999999997776666655554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.47  E-value=0.1  Score=38.99  Aligned_cols=79  Identities=14%  Similarity=0.206  Sum_probs=53.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHH-cCCeEEEEecccch---h-----------------hhHHHHHHHHHHhhhcCCCCceE
Q 039897           44 VALVTGGDSGIGRAVAHCYAL-EGATVAFTYVKSQE---E-----------------KDAQETLEILREAKTSDAKDPMA  102 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~-~G~~v~i~~r~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~~~  102 (272)
                      +|+|.|.+|.+|+.+++.+.+ .+..++....+..+   .                 ..+.+.++.            .-
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~------------~D   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE------------AD   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-------------S
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc------------CC
Confidence            689999999999999999998 67775555433220   0                 112221111            12


Q ss_pred             EeccCCChHHHHHHHHHHHHhcCCccEEEEcccc
Q 039897          103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       103 ~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      +-.|+|.++.+.+.++...+.  ++.+|+-..|+
T Consensus        70 VvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   70 VVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            667999999999998888776  78888888877

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=95.43  E-value=0.19  Score=44.18  Aligned_cols=35  Identities=34%  Similarity=0.324  Sum_probs=29.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVK   75 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~   75 (272)
                      ..|++++|+| .+++|.++++.+...|++ |+++.++
T Consensus       161 ~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~  196 (343)
T cd05285         161 RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDID  196 (343)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCC
Confidence            4589999986 589999999988889998 7777665

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=95.40  E-value=0.25  Score=42.08  Aligned_cols=36  Identities=25%  Similarity=0.351  Sum_probs=32.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      ..+++++|.|+++++|.+++..+...|++|+.+.++
T Consensus       143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~  178 (309)
T cd05289         143 KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASA  178 (309)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecc
Confidence            468999999999999999999999999999888764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.39  E-value=0.09  Score=48.74  Aligned_cols=37  Identities=24%  Similarity=0.148  Sum_probs=32.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+++++|+|.|+ |++|.++|+.|.++|++|.+++++.
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~   49 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGD   49 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            477899999996 6799999999999999999998653

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=95.39  E-value=1.4  Score=39.93  Aligned_cols=154  Identities=12%  Similarity=0.095  Sum_probs=82.1

Q ss_pred             CCCcEEEEEcCCC-chHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCC-CCceEEeccCCChHHHHHH
Q 039897           40 LRGKVALVTGGDS-GIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDA-KDPMAISADLGFDENCKRV  116 (272)
Q Consensus        40 l~~k~vlVtGas~-gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+|++||=.|+.. +++.+.    +..|+ +|+.++.++...+..++.+....     .. .++.++..|+.      ++
T Consensus       219 ~~g~rVLDlfsgtG~~~l~a----a~~ga~~V~~VD~s~~al~~a~~N~~~Ng-----l~~~~v~~i~~D~~------~~  283 (396)
T PRK15128        219 VENKRVLNCFSYTGGFAVSA----LMGGCSQVVSVDTSQEALDIARQNVELNK-----LDLSKAEFVRDDVF------KL  283 (396)
T ss_pred             cCCCeEEEeccCCCHHHHHH----HhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCCcEEEEEccHH------HH
Confidence            4678888777554 444332    23455 89999987554443333322210     11 35778888874      23


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-HH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-AR  195 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~  195 (272)
                      +..+....+..|+||.+.......       ...+.    .-..+...+.+....+++++|.++..|... ...... .+
T Consensus       284 l~~~~~~~~~fDlVilDPP~f~~~-------k~~l~----~~~~~y~~l~~~a~~lLk~gG~lv~~scs~-~~~~~~f~~  351 (396)
T PRK15128        284 LRTYRDRGEKFDVIVMDPPKFVEN-------KSQLM----GACRGYKDINMLAIQLLNPGGILLTFSCSG-LMTSDLFQK  351 (396)
T ss_pred             HHHHHhcCCCCCEEEECCCCCCCC-------hHHHH----HHHHHHHHHHHHHHHHcCCCeEEEEEeCCC-cCCHHHHHH
Confidence            333333335799999888764321       11111    223355666777888888888888666543 333232 22


Q ss_pred             HHHHHH--hhCCeEEEEEecccccCCC
Q 039897          196 GLALQL--VERGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       196 ~la~e~--~~~gi~vn~i~PG~v~t~~  220 (272)
                      .+....  +...+++.....-.-+-|.
T Consensus       352 ~v~~aa~~~~~~~~~l~~~~~~~DhP~  378 (396)
T PRK15128        352 IIADAAIDAGRDVQFIEQFRQAADHPV  378 (396)
T ss_pred             HHHHHHHHcCCeEEEEEEcCCCCCCCC
Confidence            222222  2334566555444444444

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.38  E-value=0.16  Score=45.85  Aligned_cols=44  Identities=23%  Similarity=0.362  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDA   82 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~   82 (272)
                      .+|+++++||.|+ |-+|.-++++|+++| .+|+++.|+......+
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~L  218 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEEL  218 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH
Confidence            4599999999996 568999999999999 5788888874444333

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.38  E-value=0.091  Score=47.66  Aligned_cols=38  Identities=16%  Similarity=0.176  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecccch
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA---TVAFTYVKSQE   78 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~---~v~i~~r~~~~   78 (272)
                      .|.+++|.|++|++|..+++.+...|+   +|++++++..+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r  215 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDER  215 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHH
Confidence            468999999999999999887666554   78888887443

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.37  E-value=0.034  Score=44.72  Aligned_cols=37  Identities=27%  Similarity=0.352  Sum_probs=34.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      +++||.++|.|-|.=+|+.++..|.++|++|.+++.+
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~   95 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN   95 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC
Confidence            7999999999999999999999999999999999653

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.35  E-value=0.13  Score=44.74  Aligned_cols=36  Identities=31%  Similarity=0.456  Sum_probs=32.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .|.+++|.|+++++|.++++.+...|++++++.++.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~  175 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSE  175 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            578999999999999999999999999988776653

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.35  E-value=0.097  Score=46.17  Aligned_cols=40  Identities=23%  Similarity=0.198  Sum_probs=35.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      ..+|.||++.|.|- |.||+.+|+.|...|++|+..++...
T Consensus       145 g~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        145 GYDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             ccCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            35799999999997 99999999999999999999888643

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.34  E-value=0.039  Score=45.59  Aligned_cols=36  Identities=19%  Similarity=0.246  Sum_probs=32.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE   79 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~   79 (272)
                      +|.|+||+|.+|.+++..|++.|++|++.+|+++..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~   37 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA   37 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence            589999999999999999999999999998875443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.29  E-value=0.22  Score=42.35  Aligned_cols=116  Identities=16%  Similarity=0.118  Sum_probs=65.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC----CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           45 ALVTGGDSGIGRAVAHCYALEG----ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G----~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +.|+|++|.+|..++..|+..|    .+++++|+++...+.....++....   .. ....+ .  .++  +..+.    
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~---~~-~~~~i-~--~~~--d~~~~----   67 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVE---PL-ADIKV-S--ITD--DPYEA----   67 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhh---hc-cCcEE-E--ECC--chHHH----
Confidence            4799998899999999999999    7899999986554444333333221   11 11111 1  111  11122    


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                         +..-|+||..+|.....    ..+.   ...+..|+.-...+.+.+..+- .++.+++++-
T Consensus        68 ---~~~aDiVv~t~~~~~~~----g~~r---~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tN  120 (263)
T cd00650          68 ---FKDADVVIITAGVGRKP----GMGR---LDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSN  120 (263)
T ss_pred             ---hCCCCEEEECCCCCCCc----CCCH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecC
Confidence               24799999999985332    1121   2234445544444555444332 3466666653

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.28  E-value=0.17  Score=46.43  Aligned_cols=35  Identities=23%  Similarity=0.324  Sum_probs=31.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      ++.|+||.|++|.++++.|.+.|++|++.+|++..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            68999999999999999999999999999987543

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.27  E-value=0.077  Score=45.46  Aligned_cols=37  Identities=27%  Similarity=0.280  Sum_probs=32.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..|++++|.|+++++|.++++.+...|++|+.+.++.
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~  171 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSE  171 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCH
Confidence            3689999999999999999999999999998887653

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PLN03139 formate dehydrogenase; Provisional

Probab=95.27  E-value=0.13  Score=46.16  Aligned_cols=39  Identities=18%  Similarity=0.198  Sum_probs=34.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+|.||++.|.| .|.||+.+++.|...|++|+..++..
T Consensus       194 ~~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        194 AYDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CcCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4579999999999 58899999999999999999888764

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.26  E-value=0.036  Score=47.48  Aligned_cols=39  Identities=33%  Similarity=0.408  Sum_probs=35.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      -++.||+++|.|.|.-+|+.++..|.++|++|.++....
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t  192 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT  192 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence            479999999999999999999999999999999987653

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=95.21  E-value=0.011  Score=50.11  Aligned_cols=44  Identities=25%  Similarity=0.323  Sum_probs=39.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhh
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD   81 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~   81 (272)
                      -++.||+++|.|.|.=+|+.++..|.+.+++|.++....++...
T Consensus       152 i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~  195 (283)
T COG0190         152 IDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLAS  195 (283)
T ss_pred             CCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHH
Confidence            67999999999999999999999999999999999887555433

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.18  E-value=0.13  Score=45.74  Aligned_cols=80  Identities=16%  Similarity=0.178  Sum_probs=49.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh-HHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD-ENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~  117 (272)
                      -.|.+|||.|+ |++|..+++.+...|+ +|++++++.+..+.+    .+       .+.. .++  |..+. +++.+.+
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~----~~-------~Ga~-~~i--~~~~~~~~~~~~v  250 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA----KK-------FGVT-EFV--NPKDHDKPVQEVI  250 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HH-------cCCc-eEE--cccccchhHHHHH
Confidence            45899999985 8999999998888898 788888764332221    11       1211 122  22221 2344444


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      .++..  +++|+++.+.|.
T Consensus       251 ~~~~~--~~~d~vid~~G~  267 (369)
T cd08301         251 AEMTG--GGVDYSFECTGN  267 (369)
T ss_pred             HHHhC--CCCCEEEECCCC
Confidence            44332  369999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.16  E-value=0.043  Score=46.97  Aligned_cols=40  Identities=25%  Similarity=0.272  Sum_probs=36.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .++.||.++|+|-|.-+|+.++..|.++|++|.++.+..+
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~  194 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK  194 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence            5799999999999999999999999999999999987643

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.16  E-value=0.23  Score=42.54  Aligned_cols=163  Identities=13%  Similarity=0.093  Sum_probs=95.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      =+|++++|.||+|..|+-.-+.-.-.|+.|+...-+.++-..++.   +        .+.-  -.+|-.++.++.+++++
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~---~--------~G~d--~afNYK~e~~~~~aL~r  218 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKT---K--------FGFD--DAFNYKEESDLSAALKR  218 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHh---c--------cCCc--cceeccCccCHHHHHHH
Confidence            457999999999999986555444559988877655332222211   1        1111  12334444455566655


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--hhHHHH
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--PEARGL  197 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--~~~~~l  197 (272)
                      ...  .++|+.+-|.|..                           ++.+.+..|+..|||++-+-++.+...  +..+.+
T Consensus       219 ~~P--~GIDiYfeNVGG~---------------------------~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l  269 (343)
T KOG1196|consen  219 CFP--EGIDIYFENVGGK---------------------------MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNL  269 (343)
T ss_pred             hCC--CcceEEEeccCcH---------------------------HHHHHHHhhhhccceEeeeeehhccccCCccccch
Confidence            322  3799999999873                           123455667888999987765543322  224444


Q ss_pred             HHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhh
Q 039897          198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       198 a~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                      ..-.-++ +++.-    +.-++...+.  ++..+.+...+..+.....+|+++.
T Consensus       270 ~~ii~Kr-~~iqg----flv~d~~d~~--~k~ld~l~~~ikegKI~y~edi~~G  316 (343)
T KOG1196|consen  270 STIIYKR-IRIQG----FLVSDYLDKY--PKFLDFLLPYIKEGKITYVEDIADG  316 (343)
T ss_pred             hhheeee-EEeee----EEeechhhhh--HHHHHHHHHHHhcCceEEehhHHHH
Confidence            4433332 44432    3444443222  4555666777778888888999886

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.15  E-value=0.04  Score=47.05  Aligned_cols=39  Identities=23%  Similarity=0.286  Sum_probs=35.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      -+++||.++|.|.|.-+|+.++..|.++|++|.++....
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T  191 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT  191 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence            579999999999999999999999999999999886543

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=95.15  E-value=0.26  Score=43.21  Aligned_cols=36  Identities=28%  Similarity=0.282  Sum_probs=29.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~   76 (272)
                      ..|+++||+| ++++|.++++.+...|++ |+++.++.
T Consensus       164 ~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~  200 (343)
T cd08235         164 KPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNE  200 (343)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCH
Confidence            3588999996 689999999988888999 77666653

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.13  E-value=0.044  Score=46.88  Aligned_cols=41  Identities=24%  Similarity=0.261  Sum_probs=37.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .+++||.++|.|.|.-+|+.++..|.++|++|.++....++
T Consensus       154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~d  194 (282)
T PRK14180        154 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD  194 (282)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCC
Confidence            57999999999999999999999999999999999776433

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.12  E-value=0.042  Score=47.02  Aligned_cols=41  Identities=29%  Similarity=0.341  Sum_probs=37.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .++.||+++|.|.|.-+|+.++..|.++|++|.++.....+
T Consensus       155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~  195 (284)
T PRK14177        155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN  195 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC
Confidence            57999999999999999999999999999999999766443

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.12  E-value=0.71  Score=36.59  Aligned_cols=145  Identities=19%  Similarity=0.130  Sum_probs=80.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ...++++|=.|++.|.   ++..+++.|.+|+.++.++...+..++.+.   .    .+.++.++..|+.+.      . 
T Consensus        17 ~~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~---~----~~~~~~~~~~d~~~~------~-   79 (179)
T TIGR00537        17 ELKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAK---L----NNVGLDVVMTDLFKG------V-   79 (179)
T ss_pred             hcCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHH---H----cCCceEEEEcccccc------c-
Confidence            3556788988877663   455566677789999887554444433332   1    234567777886542      1 


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHH-H---HhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhH
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV-F---RTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA  194 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~-~---~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  194 (272)
                           .+..|.++.|..+........   ..++... +   ..+......+++.+...|+++|+++++-+...  .   .
T Consensus        80 -----~~~fD~Vi~n~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~~~~~--~---~  146 (179)
T TIGR00537        80 -----RGKFDVILFNPPYLPLEDDLR---RGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQSSLN--G---E  146 (179)
T ss_pred             -----CCcccEEEECCCCCCCcchhc---ccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEEeccC--C---h
Confidence                 146899999876632211111   1111111 0   01111234456667778888999887654321  1   2


Q ss_pred             HHHHHHHhhCCeEEEEEec
Q 039897          195 RGLALQLVERGIRVNGVAP  213 (272)
Q Consensus       195 ~~la~e~~~~gi~vn~i~P  213 (272)
                      ..+-..+.+.|..+..+..
T Consensus       147 ~~~~~~l~~~gf~~~~~~~  165 (179)
T TIGR00537       147 PDTFDKLDERGFRYEIVAE  165 (179)
T ss_pred             HHHHHHHHhCCCeEEEEEE
Confidence            3334444456666666544

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PLN02306 hydroxypyruvate reductase

Probab=95.10  E-value=0.15  Score=45.91  Aligned_cols=38  Identities=24%  Similarity=0.231  Sum_probs=32.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHH-HcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYA-LEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~-~~G~~v~i~~r~~   76 (272)
                      .++.||++.|.| .|.||+++|+.|. ..|++|+..++..
T Consensus       161 ~~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~  199 (386)
T PLN02306        161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ  199 (386)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            469999999998 6889999999986 7899999888764

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.07  E-value=0.046  Score=46.63  Aligned_cols=41  Identities=29%  Similarity=0.386  Sum_probs=36.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      -+++||.++|.|.|.-+|+.++..|.++|++|.++.....+
T Consensus       154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~  194 (278)
T PRK14172        154 IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKN  194 (278)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC
Confidence            57999999999999999999999999999999999765433

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.06  E-value=0.19  Score=44.17  Aligned_cols=35  Identities=31%  Similarity=0.436  Sum_probs=31.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .|.+++|+|+++++|.++++.....|++|+.+.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            48999999999999999999999999998887653

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.06  E-value=0.1  Score=45.17  Aligned_cols=37  Identities=16%  Similarity=0.206  Sum_probs=33.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..|.++||.|+++++|.++++.+...|++++.+..+.
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~  173 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRD  173 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCh
Confidence            4578999999999999999999999999998887764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=95.05  E-value=0.27  Score=41.87  Aligned_cols=108  Identities=13%  Similarity=0.116  Sum_probs=61.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++||..|+++|+-..++........+|+.++.++...+..++.....      ...++.++..|+.+..     +  
T Consensus        76 ~~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~------g~~~v~~~~~d~~~l~-----~--  142 (272)
T PRK11873         76 KPGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKA------GYTNVEFRLGEIEALP-----V--  142 (272)
T ss_pred             CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHc------CCCCEEEEEcchhhCC-----C--
Confidence            36889999998876543333222223347999988755444433322211      1235666666664321     0  


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEec
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT  183 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vs  183 (272)
                         ..+.+|+|+.+..+....      +.              ..+++.+...|+++|++++..
T Consensus       143 ---~~~~fD~Vi~~~v~~~~~------d~--------------~~~l~~~~r~LkpGG~l~i~~  183 (272)
T PRK11873        143 ---ADNSVDVIISNCVINLSP------DK--------------ERVFKEAFRVLKPGGRFAISD  183 (272)
T ss_pred             ---CCCceeEEEEcCcccCCC------CH--------------HHHHHHHHHHcCCCcEEEEEE
Confidence               124689998776542211      11              234566778888999988754

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.04  E-value=0.061  Score=46.44  Aligned_cols=38  Identities=26%  Similarity=0.329  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTY-VK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~-r~   75 (272)
                      .+++||+|+|.|.++-+|..+|..|.++|+.|.++. |+
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT  192 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT  192 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence            479999999999999999999999999999999995 44

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.04  E-value=0.16  Score=44.49  Aligned_cols=37  Identities=27%  Similarity=0.259  Sum_probs=33.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .++.||++.|.|- |.||+++|+.|...|.+|+..++.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            4699999999996 899999999999999999988765

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.03  E-value=0.05  Score=46.58  Aligned_cols=38  Identities=29%  Similarity=0.400  Sum_probs=35.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .+++||+++|.|.|.-+|+.++..|.++|++|.++...
T Consensus       154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~  191 (284)
T PRK14190        154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK  191 (284)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC
Confidence            57999999999999999999999999999999998665

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.03  E-value=0.077  Score=44.09  Aligned_cols=37  Identities=22%  Similarity=0.320  Sum_probs=33.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCe---EEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGAT---VAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~---v~i~~r~   75 (272)
                      .++++++++|.|+ |+.|.+++..|.+.|.+   +.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            3588999999998 88899999999999985   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.02  E-value=0.05  Score=46.61  Aligned_cols=41  Identities=24%  Similarity=0.353  Sum_probs=36.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      -++.||.++|+|.|.-+|+.++..|.++|++|.++....++
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~  200 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD  200 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC
Confidence            57999999999999999999999999999999999865433

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=95.02  E-value=0.15  Score=42.67  Aligned_cols=152  Identities=14%  Similarity=0.134  Sum_probs=85.6

Q ss_pred             CcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGD-SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas-~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .++||=.|++ |.+|..++.+..+  ++++++.+.++..+..++.++.     .....++.++..|+.+      +.+..
T Consensus        45 ~~~IlDlGaG~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~l-----n~l~~ri~v~~~Di~~------~~~~~  111 (248)
T COG4123          45 KGRILDLGAGNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVAL-----NPLEERIQVIEADIKE------FLKAL  111 (248)
T ss_pred             CCeEEEecCCcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHh-----CcchhceeEehhhHHH------hhhcc
Confidence            6777777754 5667766665544  7899998865444333333332     1256778888888753      33322


Q ss_pred             HHhcCCccEEEEcccccCCCCC-cccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHHH
Q 039897          121 VNAYGKIDILVNNAAVQYKAGS-VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLAL  199 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la~  199 (272)
                      .  +..+|+||+|..+...... -.+.-.+.-+.....++..   +++.+...++++|++.++........   .-.+..
T Consensus       112 ~--~~~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~---~i~~a~~~lk~~G~l~~V~r~erl~e---i~~~l~  183 (248)
T COG4123         112 V--FASFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLED---LIRAAAKLLKPGGRLAFVHRPERLAE---IIELLK  183 (248)
T ss_pred             c--ccccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHH---HHHHHHHHccCCCEEEEEecHHHHHH---HHHHHH
Confidence            1  2369999999998654332 1111222333344445544   44445556688999999876432211   233333


Q ss_pred             HHhhCCeEEEEEecc
Q 039897          200 QLVERGIRVNGVAPG  214 (272)
Q Consensus       200 e~~~~gi~vn~i~PG  214 (272)
                      .+.=...++.-|.|-
T Consensus       184 ~~~~~~k~i~~V~p~  198 (248)
T COG4123         184 SYNLEPKRIQFVYPK  198 (248)
T ss_pred             hcCCCceEEEEecCC
Confidence            333334566666664

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.02  E-value=0.048  Score=46.75  Aligned_cols=41  Identities=32%  Similarity=0.400  Sum_probs=36.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .++.||+++|.|.|.-+|+.++..|.++|++|.++.....+
T Consensus       151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~  191 (287)
T PRK14173        151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD  191 (287)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC
Confidence            57999999999999999999999999999999998766443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	272
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		6e-68
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		7e-66
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		2e-47
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		7e-25
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-24
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-24
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-24
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		6e-24
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		6e-24
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		6e-24
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-23
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-23
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-23
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-23
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-23
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		4e-23
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		6e-23
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		1e-22
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-22
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-22
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		7e-22
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-22
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-21
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-21
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-21
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		5e-21
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		5e-21
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		5e-21
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		6e-21
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		6e-21
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		8e-21
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		2e-20
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-20
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-20
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		4e-20
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-20
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		4e-20
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		6e-20
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		9e-20
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		9e-20
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-19
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-19
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		3e-19
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		3e-19
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-19
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		4e-19
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		6e-19
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		7e-19
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		7e-19
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-19
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		8e-19
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-18
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-18
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-18
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-18
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-18
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-18
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-18
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		6e-18
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		8e-18
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-17
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-17
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-17
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-17
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		3e-17
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		5e-17
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		5e-17
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		8e-17
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-16
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-16
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		2e-16
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-16
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-16
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-16
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-16
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-16
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		7e-16
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		8e-16
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		9e-16
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-15
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-15
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-15
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-15
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		2e-15
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-15
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		3e-15
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-15
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		6e-15
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		6e-15
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		7e-15
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		7e-15
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		8e-15
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		9e-15
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-14
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-14
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		2e-14
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-14
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		2e-14
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-14
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-14
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-14
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		4e-14
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		5e-14
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		6e-14
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		6e-14
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		7e-14
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		7e-14
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		8e-14
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		9e-14
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-13
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		1e-13
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-13
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-13
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-13
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-13
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-13
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-13
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		4e-13
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		4e-13
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		4e-13
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		4e-13
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		4e-13
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		5e-13
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		5e-13
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		6e-13
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		6e-13
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		7e-13
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		7e-13
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		7e-13
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-12
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-12
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		3e-12
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-12
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		4e-12
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		4e-12
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		4e-12
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		5e-12
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		6e-12
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		6e-12
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		7e-12
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		7e-12
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		1e-11
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-11
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-11
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-11
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-11
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-11
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-11
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-11
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-11
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		3e-11
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-11
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		4e-11
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		5e-11
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		5e-11
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		9e-11
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		1e-10
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-10
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		1e-10
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		1e-10
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-10
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-10
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		2e-10
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-10
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		2e-10
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		2e-10
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		2e-10
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		4e-10
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		6e-10
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		6e-10
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		7e-10
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		8e-10
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		9e-10
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		1e-09
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-09
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		1e-09
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		1e-09
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-09
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-09
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-09
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-09
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-09
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-09
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		2e-09
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		3e-09
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-09
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		4e-09
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		5e-09
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		5e-09
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		1e-08
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-08
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		2e-08
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		2e-08
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-08
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		3e-08
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		3e-08
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		3e-08
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		4e-08
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-08
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		6e-08
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		8e-08
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		1e-07
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		1e-07
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-07
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-07
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-07
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		3e-07
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		3e-07
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		5e-07
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		6e-07
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		6e-07
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		7e-07
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		7e-07
3nrc_A	280	Crystal Stucture Of The Francisella Tularensis Enoy		7e-07
2jjy_A	268	Crystal Structure Of Francisella Tularensis Enoyl R		8e-07
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-06
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		2e-06
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-06
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		2e-06
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		2e-06
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-06
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		3e-06
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		3e-06
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		3e-06
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		4e-06
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-06
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		4e-06
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-06
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		6e-06
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		6e-06
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		8e-06
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		9e-06
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		1e-05
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-05
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		1e-05
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		3e-05
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-05
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		4e-05
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		6e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		7e-05
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		8e-05
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		8e-05
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		9e-05
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		9e-05
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		1e-04
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		1e-04
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		1e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		1e-04
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		2e-04
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		3e-04
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		3e-04
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		3e-04
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		3e-04
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		3e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		3e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		4e-04
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		4e-04
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		4e-04
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		6e-04

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score =  253 bits (647), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 134/279 (48%), Positives = 178/279 (63%), Gaps = 21/279 (7%)
Query: 8   FPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGA 67
            P Q Q  QPG E +M P PQF   +YK S KL+GK  L+TGGDSGIGRAV+  +A EGA
Sbjct: 13  MPAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGA 72
Query: 68  TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKI 127
            +A  Y+   EE DA ET + + +    +    + +  DL  +++CK +V E V   G +
Sbjct: 73  NIAIAYLD--EEGDANETKQYVEK----EGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL 126
Query: 128 DILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV-- 185
           +ILVNN A QY    +E I  E+LE+ FR NIFS+F +T+ +L H+ +G  IINT S+  
Sbjct: 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA 186
Query: 186 ----EPLWHSPEARG--------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF 233
               E L      +G        L+  LV++GIRVNGVAPGPIWTPLIPSSF E++ +QF
Sbjct: 187 YEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF 246
Query: 234 GSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           GS VPM+R GQP E+AP YV+LA +  SSY+TGQ++H N
Sbjct: 247 GSNVPMQRPGQPYELAPAYVYLASSD-SSYVTGQMIHVN 284

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  246 bits (629), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 132/278 (47%), Positives = 175/278 (62%), Gaps = 21/278 (7%)
Query: 9   PPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGAT 68
           P Q Q  QPG E +  P PQF   +YK S KL+GK  L+TGGDSGIGRAV+  +A EGA 
Sbjct: 14  PAQHQNKQPGIESLXNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGAN 73
Query: 69  VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKID 128
           +A  Y+   EE DA ET + + +    +    + +  DL  +++CK +V E V   G ++
Sbjct: 74  IAIAYLD--EEGDANETKQYVEK----EGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127
Query: 129 ILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV--- 185
           ILVNN A QY    +E I  E+LE+ FR NIFS+F +T+ +L H+ +G  IINT S+   
Sbjct: 128 ILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAY 187
Query: 186 ---EPLWHSPEARG--------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG 234
              E L      +G        L+  LV++GIRVNGVAPGPIWTPLIPSSF E++ +QFG
Sbjct: 188 EGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG 247
Query: 235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           S VP +R GQP E+AP YV+LA +  SSY+TGQ +H N
Sbjct: 248 SNVPXQRPGQPYELAPAYVYLASSD-SSYVTGQXIHVN 284

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/277 (38%), Positives = 161/277 (58%), Gaps = 22/277 (7%)
Query: 7   QFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG 66
           ++P QKQ A PG +  M P P      Y  S +L+ + ALVTGGDSGIGRA A  YA EG
Sbjct: 15  EYPKQKQPA-PGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREG 73
Query: 67  ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGK 126
           A VA  Y+ ++EE DAQ+   ++ E      +  + +  DL  +   + +V +   A G 
Sbjct: 74  ADVAINYLPAEEE-DAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHKAREALGG 128
Query: 127 IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE 186
           +DIL   A  Q     ++++  E+ ++ F  N+F+ F++T+ ++  + +G++II T+S++
Sbjct: 129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQ 188
Query: 187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPL-IPSSFSEEESA 231
               SP               +RGLA Q+ E+GIRVN VAPGPIWT L I    ++++  
Sbjct: 189 AYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP 248
Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
           QFG + PMKRAGQP E+AP YV+LA    SSY+T +V
Sbjct: 249 QFGQQTPMKRAGQPAELAPVYVYLASQE-SSYVTAEV 284

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 25/250 (10%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL+GKV+LVTG   GIGRA+A   A  G+TV  T    +  K   E      E       
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAE------EIANKYGV 57
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               +  +L  +E+  +  +E+ N    IDILVNNA +  +      +     E V + N
Sbjct: 58  KAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT-RDKLFLRMSLLDWEEVLKVN 116
Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPL--------WHSPEA------RGLALQLV 202
           +   F +T++SLR M       I+N +SV           + + +A      + LA +L 
Sbjct: 117 LTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELA 176
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            R + VN VAPG I T +  +  SEE   ++  ++P+ R G P EVA   +FL C+  +S
Sbjct: 177 PRNVLVNAVAPGFIETDM-TAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFL-CSELAS 234
Query: 263 YITGQVLHPN 272
           YITG+V+H N
Sbjct: 235 YITGEVIHVN 244

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 25/246 (10%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K ALVTG   GIGR++A   A EG  VA  Y  S+E+ +A     ++ E K +   D  A
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEA-----VVEEIK-AKGVDSFA 64
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           I A++   +  K ++ EVV+ +G +D+LVNNA +  +   +  + E+  + V  TN+   
Sbjct: 65  IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT-RDNLLMRMKEQEWDDVIDTNLKGV 123
Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
           F   + +   M      AIIN +SV     +P                +  A +L  RGI
Sbjct: 124 FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGI 183
Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN VAPG I + +   + S+E   Q  +++P+ R GQ  ++A    FLA +  + YITG
Sbjct: 184 TVNAVAPGFIVSDM-TDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDK-AKYITG 241
Query: 267 QVLHPN 272
           Q +H N
Sbjct: 242 QTIHVN 247

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 35/260 (13%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S  L GKVALVTG   GIGR +A      G  V   Y  S E   A+E +  +++    +
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES--AEEVVAAIKK----N 77
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
             D   + A++G  E+  R+ +E V  +GK+DI+ +N+ V    G V+++  E  +RVF 
Sbjct: 78  GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFT 136
Query: 157 TNIFSHFFMTRHSLRHMNEGSAIINTTSV---------EPLWHSPE------ARGLALQL 201
            N    FF+ R + +H+  G  +I   S+           ++   +      AR +A+ +
Sbjct: 137 INTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196
Query: 202 VERGIRVNGVAPGPIWTPL--------IPS--SFSEEESAQFGSE--VPMKRAGQPIEVA 249
            ++ I VN VAPG I T +        IP+  + S EE  ++ +    P++R G PI++A
Sbjct: 197 ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA 256
Query: 250 PCYVFLACNHCSSYITGQVL 269
               FLA N    ++TG+V+
Sbjct: 257 RVVCFLASND-GGWVTGKVI 275

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 35/260 (13%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S  L GKVALVTG   GIGR +A      G  V   Y  S E   A+E +  +++    +
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES--AEEVVAAIKK----N 77
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
             D   + A++G  E+  R+ +E V  +GK+DI+ +N+ V    G V+++  E  +RVF 
Sbjct: 78  GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFT 136
Query: 157 TNIFSHFFMTRHSLRHMNEGSAIINTTSV---------EPLWHSPE------ARGLALQL 201
            N    FF+ R + +H+  G  +I   S+           ++   +      AR +A+ +
Sbjct: 137 INTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196
Query: 202 VERGIRVNGVAPGPIWTPL--------IPS--SFSEEESAQFGSE--VPMKRAGQPIEVA 249
            ++ I VN VAPG I T +        IP+  + S EE  ++ +    P++R G PI++A
Sbjct: 197 ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA 256
Query: 250 PCYVFLACNHCSSYITGQVL 269
               FLA N    ++TG+V+
Sbjct: 257 RVVCFLASND-GGWVTGKVI 275

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 26/251 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKV ++TG  +G+G+++A  +A E A V   Y    +E +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY--RSKEDEANSVLEEIKKV----GGE 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+  D+  + +   +V   +  +GK+D+++NNA ++    S  E+      +V  TN+
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNL 117
Query: 160 FSHFFMTRHSLRHMNEG---SAIINTTSVE-----PLW-HSPEARG--------LALQLV 202
              F  +R ++++  E      +IN +SV      PL+ H   ++G        LAL+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            +GIRVN + PG I TP+    F++ E+ A   S +PM   G+P E+A    +LA +   
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA- 236
Query: 262 SYITGQVLHPN 272
           SY+TG  L  +
Sbjct: 237 SYVTGITLFAD 247

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 26/251 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKV ++TG  +G+G+++A  +A E A V   Y    +E +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY--RSKEDEANSVLEEIKKV----GGE 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+  D+  + +   +V   +  +GK+D+++NNA ++    S  E+      +V  TN+
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNL 117
Query: 160 FSHFFMTRHSLRHMNEG---SAIINTTSVE-----PLW-HSPEARG--------LALQLV 202
              F  +R ++++  E      +IN +SV      PL+ H   ++G        LAL+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            +GIRVN + PG I TP+    F++ E+ A   S +PM   G+P E+A    +LA +   
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA- 236
Query: 262 SYITGQVLHPN 272
           SY+TG  L  +
Sbjct: 237 SYVTGITLFAD 247

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 26/251 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKV ++TG  +G+G+++A  +A E A V   Y    +E +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY--RSKEDEANSVLEEIKKV----GGE 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+  D+  + +   +V   +  +GK+D+++NNA ++    S  E+      +V  TN+
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNL 117
Query: 160 FSHFFMTRHSLRHMNEG---SAIINTTSVE-----PLW-HSPEARG--------LALQLV 202
              F  +R ++++  E      +IN +SV      PL+ H   ++G        LAL+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYA 177
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            +GIRVN + PG I TP+    F++ E+ A   S +PM   G+P E+A    +LA +   
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA- 236
Query: 262 SYITGQVLHPN 272
           SY+TG  L  +
Sbjct: 237 SYVTGITLFAD 247

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 26/251 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKV ++TG  +G+G+++A  +A E A V   Y    +E +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY--RSKEDEANSVLEEIKKV----GGE 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+  D+  + +   +V   +  +GK+D+++NNA +     S  E+      +V  TN+
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSS-HEMSLSDWNKVIDTNL 117
Query: 160 FSHFFMTRHSLRHMNEG---SAIINTTSVE-----PLW-HSPEARG--------LALQLV 202
              F  +R ++++  E      +IN +SV      PL+ H   ++G        LAL+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            +GIRVN + PG I TP+    F++ E+ A   S +PM   G+P E+A    +LA +   
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA- 236
Query: 262 SYITGQVLHPN 272
           SY+TG  L  +
Sbjct: 237 SYVTGITLFAD 247

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 121/247 (48%), Gaps = 25/247 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVALVTG   GIGRA+A   A +GA V   Y  +  E+ A E ++ +++  +    D
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNY--AGNEQKANEVVDEIKKLGS----D 55
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+ AD+   E+   +V + V+ +G++DILVNNA V  K   +  + EE  + V  TN+
Sbjct: 56  AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNL 114
Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSP----------EARGL----ALQLVE 203
              F  T+   R M       I+N  SV  +  +P             GL    A +L  
Sbjct: 115 KGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELAS 174
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           R I VN +APG I T +      E   A+    +P  + G+  ++A    F A +  S Y
Sbjct: 175 RNITVNAIAPGFIATDM-TDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQ-SKY 232
Query: 264 ITGQVLH 270
           ITGQ L+
Sbjct: 233 ITGQTLN 239

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 28/252 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEK-DAQETLEILREAKTSDAK 98
           L+ KV ++TGG +G+GRA+A  +  E A V   Y  ++EE  DA++ +E   EA      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVE---EA----GG 65
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + +  D+  +E+   +V   +  +G +D+++NNA V+    S  E+  +   +V  TN
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTN 124
Query: 159 IFSHFFMTRHSLRHMNEGSA---IINTTSVE-----PLW-HSPEARG--------LALQL 201
           +   F  +R ++++  E      +IN +SV      PL+ H   ++G        LAL+ 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEE-ESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
             +GIRVN + PG + TP+    F++  + A   S +PM   G+P EVA    FLA +  
Sbjct: 185 APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 261 SSYITGQVLHPN 272
            SY+TG  L  +
Sbjct: 245 -SYVTGITLFAD 255

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 28/252 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEK-DAQETLEILREAKTSDAK 98
           L+ KV ++TGG +G+GRA+A  +  E A V   Y  ++EE  DA++ +E   EA      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVE---EA----GG 65
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + +  D+  +E+   +V   +  +G +D+++NNA V+    S  E+  +   +V  TN
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTN 124
Query: 159 IFSHFFMTRHSLRHMNEGSA---IINTTSVE-----PLW-HSPEARG--------LALQL 201
           +   F  +R ++++  E      +IN +SV      PL+ H   ++G        LAL+ 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEE-ESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
             +GIRVN + PG + TP+    F++  + A   S +PM   G+P EVA    FLA +  
Sbjct: 185 APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 261 SSYITGQVLHPN 272
            SY+TG  L  +
Sbjct: 245 -SYVTGITLFAD 255

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 28/252 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEK-DAQETLEILREAKTSDAK 98
           L+ KV ++TGG +G+GRA+A  +  E A V   Y  ++EE  DA++ +E   EA      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVE---EA----GG 65
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + +  D+  +E+   +V   +  +G +D+++NNA V+    S  E+  +   +V  TN
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTN 124
Query: 159 IFSHFFMTRHSLRHMNEGSA---IINTTSVE-----PLW-HSPEARG--------LALQL 201
           +   F  +R ++++  E      +IN +SV      PL+ H   ++G        LAL+ 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEE-ESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
             +GIRVN + PG + TP+    F++  + A   S +PM   G+P EVA    FLA +  
Sbjct: 185 APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 261 SSYITGQVLHPN 272
            SY+TG  L  +
Sbjct: 245 -SYVTGITLFAD 255

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 121/248 (48%), Gaps = 29/248 (11%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K ALVTG   GIGR++A   A EG  VA  Y  S+E+ +A     ++ E K +   D  A
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEA-----VVEEIK-AKGVDSFA 58
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           I A++   +  K  + EVV+ +G +D+LVNNA +  +   +    E+  + V  TN+   
Sbjct: 59  IQANVADADEVKAXIKEVVSQFGSLDVLVNNAGIT-RDNLLXRXKEQEWDDVIDTNLKGV 117
Query: 163 FF----MTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVER 204
           F      T   LR  +   AIIN +SV     +P                +  A +L  R
Sbjct: 118 FNCIQKATPQXLRQRS--GAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASR 175
Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI 264
           GI VN VAPG I +     + S+E   Q  +++P+ R GQ  ++A    FLA +  + YI
Sbjct: 176 GITVNAVAPGFIVSDX-TDALSDELKEQXLTQIPLARFGQDTDIANTVAFLASDK-AKYI 233
Query: 265 TGQVLHPN 272
           TGQ +H N
Sbjct: 234 TGQTIHVN 241

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 111/247 (44%), Gaps = 27/247 (10%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KV L+TGG  GIG A A   A +G  VA  Y  +    D  E +  +REA        +A
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAAD--EVVRQIREA----GGQALA 79
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + AD+  +       + V    G++  LVNNA V  +   V+ I  ERL+R F  N+F  
Sbjct: 80  VQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGS 139
Query: 163 FF-----MTRHSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLV 202
           F      + R S R+   G +I+N +S      SP                  GLA ++ 
Sbjct: 140 FLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVA 199
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             GIRVN V PG I T +  S      +     +VP +RAG   EVA   V+L  +  +S
Sbjct: 200 TEGIRVNAVRPGIIETDIHASGGLPNRARDVAPQVPXQRAGTAREVAEAIVWLLGDQ-AS 258
Query: 263 YITGQVL 269
           Y TG +L
Sbjct: 259 YTTGALL 265

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 112/247 (45%), Gaps = 27/247 (10%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           V LVTGG  GIG AV    A +G  V   Y  ++E  DA      +  A T    + +AI
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADA------VVAAITESGGEAVAI 81
Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
             D+G   +       V   +G++D LVNNA +      V+E   ER+ER  R N+    
Sbjct: 82  PGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSI 141
Query: 164 FMTRHSLR-----HMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE 203
                ++R     +  +G AI+N +S   +  S                   GLA ++  
Sbjct: 142 LCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAA 201
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
            GIRVN V PG I T L  S    + + +    VP +RAG P EVA   ++L  +  +SY
Sbjct: 202 EGIRVNAVRPGIIETDLHASGGLPDRAREXAPSVPXQRAGXPEEVADAILYL-LSPSASY 260
Query: 264 ITGQVLH 270
           +TG +L+
Sbjct: 261 VTGSILN 267

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 122/249 (48%), Gaps = 29/249 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG   GIG+A+A   A  GA V  T   +  E  AQ   + L      D   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGT---ATSESGAQAISDYL-----GDNGK 61
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            MA+  ++   E+ + V+  + + +G +DILVNNA +  +   +  + EE    +  TN+
Sbjct: 62  GMAL--NVTNPESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETNL 118
Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTS-VEPLWHSPEA-------------RGLALQLVE 203
            S F +++  LR M       IIN  S V  + ++ +A             + +A ++  
Sbjct: 119 TSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVAS 178
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           RG+ VN VAPG I T +  +   E+ +A   ++VP  R G P E+A    FLA     +Y
Sbjct: 179 RGVTVNTVAPGAIETDMTKALNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEA-AY 236
Query: 264 ITGQVLHPN 272
           ITG+ LH N
Sbjct: 237 ITGETLHVN 245

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 123/249 (49%), Gaps = 29/249 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG   GIG+A+A   A  GA V  T   +  E  AQ   + L      D   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGT---ATSESGAQAISDYL-----GDNGK 61
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            MA+  ++   E+ + V+  + + +G +DILVNNAA+  +   +  + EE    +  TN+
Sbjct: 62  GMAL--NVTNPESIEAVLKAITDEFGGVDILVNNAAIT-RDNLLMRMKEEEWSDIMETNL 118
Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTS-VEPLWHSPEA-------------RGLALQLVE 203
            S F +++  LR M       IIN  S V  + ++ +A             + +A ++  
Sbjct: 119 TSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVAS 178
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           RG+ VN VAPG I T +  +   E+ +A   ++VP  R G P E+A    FLA     +Y
Sbjct: 179 RGVTVNTVAPGFIETDMTKALNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEA-AY 236
Query: 264 ITGQVLHPN 272
           ITG+ LH N
Sbjct: 237 ITGETLHVN 245

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 122/249 (48%), Gaps = 29/249 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG   GIG+A+A   A  GA V  T   +  E  AQ   + L      D   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGT---ATSESGAQAISDYL-----GDNGK 61
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            MA+  ++   E+ + V+  + + +G +DILVNNA +  +   +  + EE    +  TN+
Sbjct: 62  GMAL--NVTNPESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETNL 118
Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTS-VEPLWHSPEA-------------RGLALQLVE 203
            S F +++  LR M       IIN  S V  + ++ +A             + +A ++  
Sbjct: 119 TSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVAS 178
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           RG+ VN VAPG I T +  +   E+ +A   ++VP  R G P E+A    FLA     +Y
Sbjct: 179 RGVTVNTVAPGFIETDMTKALNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEA-AY 236
Query: 264 ITGQVLHPN 272
           ITG+ LH N
Sbjct: 237 ITGETLHVN 245

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 122/249 (48%), Gaps = 29/249 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG   GIG+A+A   A  GA V  T   +  E  AQ   + L      D   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGT---ATSESGAQAISDYL-----GDNGK 61
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            MA+  ++   E+ + V+  + + +G +DILVNNA +  +   +  + EE    +  TN+
Sbjct: 62  GMAL--NVTNPESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETNL 118
Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTS-VEPLWHSPEA-------------RGLALQLVE 203
            S F +++  LR M       IIN  S V  + ++ +A             + +A ++  
Sbjct: 119 TSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVAS 178
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           RG+ VN VAPG I T +  +   E+ +A   ++VP  R G P E+A    FLA     +Y
Sbjct: 179 RGVTVNTVAPGFIETDMTKALNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEA-AY 236
Query: 264 ITGQVLHPN 272
           ITG+ LH N
Sbjct: 237 ITGETLHVN 245

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 122/249 (48%), Gaps = 29/249 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVALVTG   GIG+A+A   A  GA V  T   +  E  AQ   + L      D   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGT---ATSESGAQAISDYL-----GDNGK 61
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            MA+  ++   E+ + V+  + + +G +DILVNNA +  +   +  + EE    +  TN+
Sbjct: 62  GMAL--NVTNPESIEAVLKAITDEFGGVDILVNNADIT-RDNLLMRMKEEEWSDIMETNL 118
Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTS-VEPLWHSPEA-------------RGLALQLVE 203
            S F +++  LR M       IIN  S V  + ++ +A             + +A ++  
Sbjct: 119 TSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVAS 178
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           RG+ VN VAPG I T +  +   E+ +A   ++VP  R G P E+A    FLA     +Y
Sbjct: 179 RGVTVNTVAPGFIETDMTKALNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEA-AY 236
Query: 264 ITGQVLHPN 272
           ITG+ LH N
Sbjct: 237 ITGETLHVN 245

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 35/256 (13%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVA++TG  +GIGRA A  +A EGA V  T    +  +  +ET + +  A  S+ ++  +
Sbjct: 7   KVAIITGSSNGIGRATAVLFAREGAKVTIT---GRHAERLEETRQQILAAGVSE-QNVNS 62
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-----QYKAGSVEEIDEERLERVFRT 157
           + AD+  D     ++   +  +GK+DILVNNA       Q K G+ + I  E  +     
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSI--ESYDATLNL 120
Query: 158 NIFSHFFMTRHSLRHMNEGSA-IINTTSVEPLWH-SPE--------------ARGLALQL 201
           N+ S   +T+ ++ H++     I+N +S+    H +P+               R  A+ L
Sbjct: 121 NLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDL 180
Query: 202 VERGIRVNGVAPGPIWTPLIPS-SFSEEESAQFGSE-------VPMKRAGQPIEVAPCYV 253
           ++ GIRVN ++PG + T    +    EE S +F S        VP    GQP ++A    
Sbjct: 181 IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 240
Query: 254 FLACNHCSSYITGQVL 269
           FLA    SSYI G  L
Sbjct: 241 FLADRKTSSYIIGHQL 256

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 30/249 (12%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GK A++TG  +GIG+ +A  +A  GA+V  + + +       + ++ L         
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-------GG 60
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE--ERLERVFR 156
              A   D+  ++    + D  ++  GK+DILVNNA      G  +  D       R + 
Sbjct: 61  QAFACRCDITSEQELSALADFAISKLGKVDILVNNAG----GGGPKPFDMPMADFRRAYE 116
Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQ 200
            N+FS F +++     M  N G  I+  TS+     +                 R +A  
Sbjct: 117 LNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFD 176
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L E+ IRVNG+APG I T  + S  + E   +     P++R GQP ++A   +FL C+  
Sbjct: 177 LGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFL-CSPA 235
Query: 261 SSYITGQVL 269
           +S+++GQ+L
Sbjct: 236 ASWVSGQIL 244

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 36/249 (14%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GK  LVTGG  GIGRA+A  +A EGA VA   ++ + ++ A+       +    D ++ +
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERV 65
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
                        R V+E   A G++D+LVNNAA+    GS   +      RV   N+ +
Sbjct: 66  -------------RFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTA 111
Query: 162 HFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVERG 205
              ++  + R M +  G AI+N  SV+ L+   E               R LAL L    
Sbjct: 112 PMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLR 171
Query: 206 IRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           IRVN VAPG I T  +  + +     E     +     ++R G+P EVA   +FLA    
Sbjct: 172 IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK- 230
Query: 261 SSYITGQVL 269
           +S+ITG +L
Sbjct: 231 ASFITGAIL 239

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 128/271 (47%), Gaps = 35/271 (12%)
Query: 25  PTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQE 84
           P  +  S  Y P  +L GKVALVTG   GIG AVA      GA V   Y  S   KDA++
Sbjct: 2   PHVENASETYIP-GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST--KDAEK 58
Query: 85  TLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE 144
            +  ++   +    D +AI AD+       ++ D+ V  +G +DI V+N+ V    G ++
Sbjct: 59  VVSEIKALGS----DAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLK 113
Query: 145 EIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS-VEPLWHSPE------ARGL 197
           ++ EE  +RVF  N    FF+ R + RH+ EG  I+ T+S     +  P+      ++G 
Sbjct: 114 DVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLFSGSKGA 173
Query: 198 ALQLV--------ERGIRVNGVAPGPIWTPL--------IP--SSFSEEESAQFGSEV-P 238
               V        ++ I VN VAPG   T +        IP  +S++ E+  Q  +   P
Sbjct: 174 VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP 233
Query: 239 MKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
           + R G P +VA    FL       ++ G+VL
Sbjct: 234 LHRNGWPQDVANVVGFLVSKE-GEWVNGKVL 263

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 126/271 (46%), Gaps = 35/271 (12%)
Query: 25  PTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQE 84
           P  +  S  Y P  +L GKVALVTG   GIG AVA      GA V   Y  S   KDA++
Sbjct: 2   PHVENASETYIP-GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST--KDAEK 58
Query: 85  TLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE 144
            +  ++   +    D +AI AD+       ++ D+ V  +G +DI V+N+ V    G ++
Sbjct: 59  VVSEIKALGS----DAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLK 113
Query: 145 EIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS---------VEPLWHSPEA- 194
           ++ EE  +RVF  N    FF+ R + RH+ EG  I+ T+S            L+   +  
Sbjct: 114 DVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGA 173
Query: 195 -----RGLALQLVERGIRVNGVAPGPIWTPL--------IP--SSFSEEESAQFGSEV-P 238
                R  +    ++ I VN VAPG   T +        IP  +S++ E+  Q  +   P
Sbjct: 174 VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP 233
Query: 239 MKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
           + R G P +VA    FL       ++ G+VL
Sbjct: 234 LHRNGWPQDVANVVGFLVSKE-GEWVNGKVL 263

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 122/251 (48%), Gaps = 31/251 (12%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL G+ ALVTG   GIG A+A C+  +GA V      ++E+K        L+E      K
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLH--GTREDK--------LKEIAADLGK 73
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           D    SA+L   ++ K++ +        IDILVNNA +  + G    + ++  + V   N
Sbjct: 74  DVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT-RDGLFVRMQDQDWDDVLAVN 132
Query: 159 IFSHFFMTR---HSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQL 201
           + +   +TR   HS+     G  IIN TS+  +  +P               ++ LA ++
Sbjct: 133 LTAASTLTRELIHSMMRRRYGR-IINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEI 191
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             R I VN +APG I + +     +E++     + +PMKR G   E+A   V+LA +  +
Sbjct: 192 ASRNITVNCIAPGFIKSAM-TDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDE-A 249
Query: 262 SYITGQVLHPN 272
           +Y+TGQ LH N
Sbjct: 250 AYLTGQTLHIN 260

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 120/256 (46%), Gaps = 31/256 (12%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GK  L+TG   GIG A A  +A  GA V     K+    D  ET+  +R    +D  D
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID--ETIASMR----ADGGD 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
               +ADL   E C+++VDE V  +G ID+L+NNA        + EID+   + V   NI
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANI 118
Query: 160 FSHFFMTRHSLRHM-------NEGSAIINTTSV----------------EPLWHSPEARG 196
            S    T+ +L H+        + SA+I+T S+                +   H+     
Sbjct: 119 RSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNW 178
Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           +     + G+R N V+PG + T       +++   +  + +PM R G   E+AP ++F A
Sbjct: 179 VDFH-TKDGVRFNIVSPGTVDTAFHADK-TQDVRDRISNGIPMGRFGTAEEMAPAFLFFA 236
Query: 257 CNHCSSYITGQVLHPN 272
            +  S YITGQVL  N
Sbjct: 237 SHLASGYITGQVLDIN 252

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 31/255 (12%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +  GK  ++TG  +GIGR+ A  +A EGA V  T    + E   +ET + + +A    A+
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTIT---GRNEDRLEETKQQILKAGVP-AE 78
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE--ERLERVFR 156
              A+ AD+        +++  +  +GKIDILVNNA      G+    D+  E  ++ F+
Sbjct: 79  KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANT-DQPVELYQKTFK 137
Query: 157 TNIFSHFFMTRHSLRHMNEGSA-IINTTSV---------EPLWHSPEA------RGLALQ 200
            N  +   MT+ +  H+ +    I+N +S+          P +   +A      R  A+ 
Sbjct: 138 LNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAID 197
Query: 201 LVERGIRVNGVAPGPIWTPL-----IPSSFSEEESAQFGSE---VPMKRAGQPIEVAPCY 252
           L++ G+RVN V+PG + T       +P + S++  +  GS    +P+   G+P E+A   
Sbjct: 198 LIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANII 257
Query: 253 VFLACNHCSSYITGQ 267
           VFLA  + SSYI GQ
Sbjct: 258 VFLADRNLSSYIIGQ 272

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +L GK  LVTG  SGIGRA    +A EGA++     + +   +A   LE    A  +D 
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV 61
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
            DP A+ A          V  E +  +G++  + + A V + A S   +  E  E+V R 
Sbjct: 62  SDPKAVEA----------VFAEALEEFGRLHGVAHFAGVAHSALS-WNLPLEAWEKVLRV 110
Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW-----HSPE--------ARGLALQLVER 204
           N+   F + R +   + EG +++ T SV  L      H           AR LAL+L  +
Sbjct: 111 NLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARK 170
Query: 205 GIRVNGVAPGPIWTPLI----PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           G+RVN + PG I TP+     P ++ +E  A      P+ RAG+P EVA   +FL  +  
Sbjct: 171 GVRVNVLLPGLIQTPMTAGLPPWAWEQEVGAS-----PLGRAGRPEEVAQAALFL-LSEE 224
Query: 261 SSYITGQVLHPN 272
           S+YITGQ L+ +
Sbjct: 225 SAYITGQALYVD 236

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           SN+L GKVA++TGG  GIG A+A  +  EGA V  T        D  E     + AK+  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT----DRHSDVGE-----KAAKSVG 51
Query: 97  AKDPMAISADLGFDEN-CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
             D +        DE+   ++ D    A+G +  LVNNA +     SVEE       ++ 
Sbjct: 52  TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK-SVEETTTAEWRKLL 110
Query: 156 RTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP----------------EARG 196
             N+   FF TR  ++ M     G++IIN +S+E     P                ++  
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAA 170
Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           L   L +  +RVN V PG I TPL+      EE+    ++ PM   G+P ++A   V+LA
Sbjct: 171 LDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA 230
Query: 257 CNHCSSYITG 266
            N  S + TG
Sbjct: 231 SNE-SKFATG 239

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           SN+L GKVA++TGG  GIG A+A  +  EGA V  T        D  E     + AK+  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT----GRHSDVGE-----KAAKSVG 51
Query: 97  AKDPMAISADLGFDEN-CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
             D +        DE+   ++ D    A+G +  LVNNA +     SVEE       ++ 
Sbjct: 52  TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK-SVEETTTAEWRKLL 110
Query: 156 RTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP----------------EARG 196
             N+   FF TR  ++ M     G++IIN +S+E     P                ++  
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAA 170
Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           L   L +  +RVN V PG I TPL+      EE+    ++ PM   G+P ++A   V+LA
Sbjct: 171 LDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA 230
Query: 257 CNHCSSYITG 266
            N  S + TG
Sbjct: 231 SNE-SKFATG 239

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 29/247 (11%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GK+ALVTG   GIGRA+A   A  GA V  T       +   + L    +    +  DP 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           +I +          V++++   +G++DILVNNA +  +   +  + +E    +  TN+ S
Sbjct: 65  SIES----------VLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSS 113
Query: 162 HFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA-------------RGLALQLVERG 205
            F +++  +R M +   G  I   + V  + +  +A             + LA ++  RG
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRG 173
Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           I VN VAPG I T +   + S+++ A   ++VP  R G   E+A    FLA +   +YIT
Sbjct: 174 ITVNVVAPGFIETDM-TRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA-AYIT 231
Query: 266 GQVLHPN 272
           G+ LH N
Sbjct: 232 GETLHVN 238

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 29/247 (11%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GK+ALVTG   GIGRA+A   A  GA V  T       +   + L    +    +  DP 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           +I +          V++++   +G++DILVNNA +  +   +  + +E    +  TN+ S
Sbjct: 65  SIES----------VLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSS 113
Query: 162 HFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA-------------RGLALQLVERG 205
            F +++  +R M +   G  I   + V  + +  +A             + LA ++  RG
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRG 173
Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           I VN VAPG I T +   + S+++ A   ++VP  R G   E+A    FLA +   +YIT
Sbjct: 174 ITVNVVAPGFIETDM-TRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA-AYIT 231
Query: 266 GQVLHPN 272
           G+ LH N
Sbjct: 232 GETLHVN 238

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 29/251 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVALVTG   GIGRA+A   A +GA VA  Y   +EE  A+ET+  ++    S+   
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE--AEETVYEIQ----SNGGS 58
Query: 100 PMAISADL----GFDENCKRVVDEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLER 153
             +I A+L    G +     + +E+ N  G  K DIL+NNA +   A  +EE  E+  +R
Sbjct: 59  AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA-FIEETTEQFFDR 117
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------ARG--------LAL 199
               N  + FF+ + +L  + + S IIN +S       P+       +G        LA 
Sbjct: 118 XVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAK 177
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVFLACN 258
           QL  RGI VN + PG + T       S+    Q+ + +    R G+  ++A    FLA  
Sbjct: 178 QLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLASP 237
Query: 259 HCSSYITGQVL 269
             S ++TGQ++
Sbjct: 238 D-SRWVTGQLI 247

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 117/262 (44%), Gaps = 41/262 (15%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GK AL+TG   GIGRA A  Y  EGA VA           A   LE  R        
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAI----------ADINLEAARATAAEIGP 51
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              AI+ D+    +  R V E+++ +G IDILVNNAA+ +    + EI  E  +R+F  N
Sbjct: 52  AACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAAL-FDLAPIVEITRESYDRLFAIN 110
Query: 159 IFSHFFMTRHSLRHM---NEGSAIINTTS--------VEPLWHSPEA------RGLALQL 201
           +    FM +   R M     G  IIN  S        +  ++ + +A      +   L L
Sbjct: 111 VSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNL 170
Query: 202 VERGIRVNGVAPGPI----WTPLIPSSFSE-------EESAQFGSEVPMKRAGQPIEVAP 250
           +  GI VN +APG +    W   + + F++       E+  Q G+ VP  R G+  ++  
Sbjct: 171 IRHGINVNAIAPGVVDGEHWDG-VDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTG 229
Query: 251 CYVFLACNHCSSYITGQVLHPN 272
             +FLA    + YI  Q  + +
Sbjct: 230 MAIFLATPE-ADYIVAQTYNVD 250

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S  L GK A VTGG  GIG A+A   ALEGA VA TYV + E   A     ++ E + + 
Sbjct: 26  SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQA-----VVSEIEQAG 80
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +  +AI AD    E  ++ + E V A G +DILVN+A + + A  +EE      + V  
Sbjct: 81  GR-AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSA-PLEETTVADFDEVXA 138
Query: 157 TNIFSHFFMTRHSLRHMNEGSAII----NTTSVEP-----LWHSPEA------RGLALQL 201
            N  + F   R + RH+ +G  II    N   + P     L+ + +A      +GLA  L
Sbjct: 139 VNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDL 198
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             RGI VN V PG   T   P+     E+ +    +     G+P ++A    +LA     
Sbjct: 199 GPRGITVNIVHPGSTDTDXNPADGDHAEAQR--ERIATGSYGEPQDIAGLVAWLAGPQ-G 255
Query: 262 SYITGQVL 269
            ++TG  L
Sbjct: 256 KFVTGASL 263

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 122/252 (48%), Gaps = 31/252 (12%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+G  ALVTGG  GIG A+    A  GA V   Y  S+ EK+  E LEI RE K  + + 
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARV---YTCSRNEKELDECLEIWRE-KGLNVEG 74
Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
            +    DL       +++  V + + GK++ILVNNA V       ++  E+    +  TN
Sbjct: 75  SVC---DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHK-EAKDFTEKDYNIIMGTN 130
Query: 159 IFSHFFMTR--HSLRHMNEGSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
             + + +++  + L   ++   +I  +S+      P                + LA +  
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           +  IRVN VAPG I TPL+ ++       +EE   F  + PM RAG+P EV+    FL C
Sbjct: 191 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFL-C 249
Query: 258 NHCSSYITGQVL 269
              +SYITGQ++
Sbjct: 250 FPAASYITGQII 261

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 25/250 (10%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S +   KV +VTG   GIG+A A   A EGA V    + +       E  E + +   +D
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINA-------EAAEAVAKQIVAD 56
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV--QYKAGSVEEIDEERLERV 154
               ++++ D+   E+ K + D  +  +G ID LVNNAA+    K   +  ID E  ++ 
Sbjct: 57  GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKF 116
Query: 155 FRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEARGLA------------LQ 200
              N+    + TR   + M +  G AI+N +S    W      GLA             +
Sbjct: 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAA-WLYSNYYGLAKVGINGLTQQLSRE 175
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L  R IR+N +APGPI T    ++  +E        +P+ R G P ++    +FL  +  
Sbjct: 176 LGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDE- 234
Query: 261 SSYITGQVLH 270
           +S+ITGQ+ +
Sbjct: 235 ASWITGQIFN 244

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 33/261 (12%)
Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
           T + Y  S  L  +V +VTGG SGIGRA A  +A  GA V    V   E+   +   EI 
Sbjct: 15  TENLYFQSXDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV--NEDAAVRVANEIG 72
Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
            +A          +  D+   ++ +  V++    +G++D+LVNNA      G+V  I EE
Sbjct: 73  SKA--------FGVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFG-TTGNVVTIPEE 123
Query: 150 RLERVFRTNIFSHFFMTRHSL--RHMNEGSAIINTTSVEPLWH--------------SPE 193
             +R+   N+   F  +++ +     N G +IINTTS                    S  
Sbjct: 124 TWDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSL 183
Query: 194 ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES-----AQFGSEVPMKRAGQPIEV 248
            R  A    + GIRVN VAPG I +P     F+E +      + F +     R G   E+
Sbjct: 184 TRAXAXDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEI 243
Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   +FLA +  S + TG +L
Sbjct: 244 AEAXLFLASDR-SRFATGSIL 263

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA-- 97
           L GKVALVTG   GIG+A+A   A  GA V  T   +  E  AQ   + L +     A  
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGT---ATSESGAQAISDYLGDNGKGXALN 63
Query: 98  -KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
             +P +I A L      K + DE    +G +DILVNNA +  +   +    EE    +  
Sbjct: 64  VTNPESIEAVL------KAITDE----FGGVDILVNNAGIT-RDNLLXRXKEEEWSDIXE 112
Query: 157 TNIFSHFFMTRHSLRHMNEG--SAIINTTSV--------EPLWHSPEA------RGLALQ 200
           TN+ S F +++  LR   +     IIN  SV        +  + + +A      +  A +
Sbjct: 113 TNLTSIFRLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXARE 172
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           +  RG+ VN VAPG I T    +   E+ +A   ++VP  R G P E+A    FLA    
Sbjct: 173 VASRGVTVNTVAPGFIETDXTKALNDEQRTATL-AQVPAGRLGDPREIASAVAFLASPEA 231
Query: 261 SSYITGQVLHPN 272
            +YITG+ LH N
Sbjct: 232 -AYITGETLHVN 242

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 35/252 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  KVALVT    GIG A+A   A +GA V  +  K Q    A  TL+        +   
Sbjct: 13  LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQ-------GEGLS 65
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                  +G  E+ +R+V   V  +G IDILV+NAAV    GS+ ++ EE  ++    N+
Sbjct: 66  VTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINV 125
Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            +   MT+  +  M +  G +++  +S+     SP                + LA++L  
Sbjct: 126 KAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAP 185
Query: 204 RGIRVNGVAPGPIWTPLIPSSFS------EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           R IRVN +APG     LI +SFS      +E+       + ++R G+P + A    FL C
Sbjct: 186 RNIRVNCLAPG-----LIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFL-C 239
Query: 258 NHCSSYITGQVL 269
           +  +SYITG+ +
Sbjct: 240 SEDASYITGETV 251

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 43/257 (16%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS--- 95
           +L+GK A+VTG   G+G+A+A      GA +      +    DA  T E  + A  +   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDA--TAEEFKAAGINVVV 59
Query: 96  ---DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
              D K+P          E+ + +V   ++A+G+IDILVNNA +  +   + ++ E+  +
Sbjct: 60  AKGDVKNP----------EDVENMVKTAMDAFGRIDILVNNAGIT-RDTLMLKMSEKDWD 108
Query: 153 RVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPL--------WHSPEA------RG 196
            V  TN+ S +  T+   + M   +   IIN TS+  +        + + +A      + 
Sbjct: 109 DVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKS 168
Query: 197 LALQLVERGIRVNGVAPGPI---WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
           +A +   +GI  N VAPG I    T ++P    E     + + +P+KR G P EVA    
Sbjct: 169 IAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKE----MYLNNIPLKRFGTPEEVANVVG 224
Query: 254 FLACNHCSSYITGQVLH 270
           FLA +  S+YITGQV++
Sbjct: 225 FLASDD-SNYITGQVIN 240

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 113/246 (45%), Gaps = 34/246 (13%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S +L GKVALV+GG  G+G +       EGA V F  +  +E K     L         D
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD 61
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
              P             K  VD  V A+G + +LVNNA +    G++E+      +R+  
Sbjct: 62  VTQP----------AQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRILD 110
Query: 157 TNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPL-----WHSPEA-----RGL----ALQ 200
            N+   F   R  ++ M E    +IIN +S+E L      H   A     RGL    AL+
Sbjct: 111 VNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALE 170
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L   GIRVN + PG + TP+  + +  E+  Q      + RA +P+EV+   V+LA +  
Sbjct: 171 LGPSGIRVNSIHPGLVKTPM--TDWVPEDIFQ----TALGRAAEPVEVSNLVVYLASDE- 223
Query: 261 SSYITG 266
           SSY TG
Sbjct: 224 SSYSTG 229

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 26/238 (10%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GK+ALVTG   GIGRA+A   A  GA V  T       +   + L    +    +  DP 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           +I +          V++++   +G++DILVNNA +  +   +  + +E    +  TN+ S
Sbjct: 65  SIES----------VLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSS 113
Query: 162 HFFMTRHSLR-HMNEGSAIINTTSVEPLWHSPEA------RGLALQLVERGIRVNGVAPG 214
            F +++  +R  M +    I T   +  + + +A      + LA ++  RGI VN VAPG
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPG 173
Query: 215 PIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
            I T       S+++ A   ++VP  R G   E+A    FLA +   +YITG+ LH N
Sbjct: 174 FIET-------SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA-AYITGETLHVN 223

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
           P+ +   +V L+TGG SG+GRA A   A EGA ++   V S       E LE  + A   
Sbjct: 7   PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSS-------EGLEASKAAVLE 59
Query: 96  DAKDPMAIS--ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER 153
            A D   ++  AD+  +   +  V      +G+ID   NNA ++ K    E       ++
Sbjct: 60  TAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDK 119
Query: 154 VFRTNIFSHFFMTRHSLRHMNE-GSA-IINTTSVEPLWHSPEARGL-------------- 197
           V   N+   F      L+ M E GS  ++NT SV  +       G               
Sbjct: 120 VVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNS 179
Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSE-------EESAQFGSEVPMKRAGQPIEVAP 250
           A++    GIR+N +APG IWTP++ +S  +       + + +F    P KR G+  E+A 
Sbjct: 180 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAA 239
Query: 251 CYVFLACNHCSSYITGQVL 269
              FL  +   SY+   V+
Sbjct: 240 VVAFLLSDDA-SYVNATVV 257

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 26/251 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           LRG+VALVTGG  G+G  +A   A  G +V    V S+  ++A E  + L E       +
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVV---VASRNLEEASEAAQKLTEKY---GVE 72
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            MA   D+   E  K++++ V   +GK+D +VN A +  +    EE   +   +V   N+
Sbjct: 73  TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH-PAEEFPLDEFRQVIEVNL 131
Query: 160 FSHFFMTRHSLRHMNEGS--AIINTTS--VEPLWH-------------SPEARGLALQLV 202
           F  +++ R +   + E    +IIN  S  VE +               +   + LA +  
Sbjct: 132 FGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 191
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG-SEVPMKRAGQPIEVAPCYVFLACNHCS 261
             GIRVN +APG   T +  + FS+ E   +    +P+ R G P ++    VFLA    +
Sbjct: 192 RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEE-A 250
Query: 262 SYITGQVLHPN 272
            Y+TGQ++  +
Sbjct: 251 KYVTGQIIFVD 261

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 35/250 (14%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK +L+TG  SGIG A+A      G+ V  +   S EEK     L+ L  A     KD
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIIS--GSNEEK-----LKSLGNA----LKD 60
Query: 100 PMAISA-DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              I   +L   E C  ++ +  N    +DILV NA +     ++   D++  ++V   N
Sbjct: 61  NYTIEVCNLANKEECSNLISKTSN----LDILVCNAGITSDTLAIRMKDQD-FDKVIDIN 115
Query: 159 IFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSP--------------EARGLALQLV 202
           + ++F + R +++ M +     IIN +S+  +  +P                + L+ ++ 
Sbjct: 116 LKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA 175
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            RGI VN VAPG I + +     +E++      ++P+   G P +VA    FLA N+ +S
Sbjct: 176 TRGITVNAVAPGFIKSDM-TDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNN-AS 233
Query: 263 YITGQVLHPN 272
           YITGQ LH N
Sbjct: 234 YITGQTLHVN 243

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 36/255 (14%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVA+VTGG  GIGR ++   A +G  +A   +  QEE+ A ET++++  A     +  + 
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQ-AAETIKLIEAAD----QKAVF 57
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-QYKAGSVEEIDEERLERVFRTNIFS 161
           +  D+    N    +DE     G  D+LVNNA + Q K   + E+ EE L++++  N+FS
Sbjct: 58  VGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIK--PLLEVTEEDLKQIYSVNVFS 115
Query: 162 HFFMTRHSLRHMNE-----------------GSAIINTTSVEPLWHSPEARGLALQLVER 204
            FF  + + R  +E                 G  I++  S          +  A +L  +
Sbjct: 116 VFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPK 175
Query: 205 GIRVNGVAPGPIWTPL---IPSSFSE-------EESAQFGSEVPMKRAGQPIEVAPCYVF 254
           G  VN  APG + T +   I +  S+       E   ++ S + + R   P +VA    F
Sbjct: 176 GHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSF 235
Query: 255 LACNHCSSYITGQVL 269
           LA  + S+Y+TGQV+
Sbjct: 236 LASEN-SNYVTGQVM 249

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 24/246 (9%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           +VA VTGG  G+G A++      G  VA     S  E++   +  ++ E      +D  A
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAV----SHSERNDHVSTWLMHERDAG--RDFKA 79
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
            + D+   E+C+R  ++V+  +GK+D+L+NNA +   A +  ++ +   + V RT++ + 
Sbjct: 80  YAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDA-TFMKMTKGDWDAVMRTDLDAM 138
Query: 163 FFMTRHSLRHMNEG--SAIINTTSV--------EPLWHSPEA------RGLALQLVERGI 206
           F +T+  +  M E     I+N  SV        +  + S +A      + LAL+  +RGI
Sbjct: 139 FNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGI 198
Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN V+PG + T ++ +   +   A+   ++P+ R G+P EVA    FL C+  + ++TG
Sbjct: 199 TVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFL-CSDDAGFVTG 257
Query: 267 QVLHPN 272
             L  N
Sbjct: 258 ADLAIN 263

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
           T + Y  S     KVA+VTG   GIG A+A   A +G TV   Y  + +   A+E    +
Sbjct: 15  TENLYFQSXXETNKVAIVTGASRGIGAAIAARLASDGFTVVINY--AGKAAAAEEVAGKI 72
Query: 90  REA------KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSV 143
             A        +D  DP A+          +R+      A+G +D+LVNNA +     ++
Sbjct: 73  EAAGGKALTAQADVSDPAAV----------RRLFATAEEAFGGVDVLVNNAGIXPLT-TI 121
Query: 144 EEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIIN-TTSVEPLWH-----------S 191
            E  +   +RV   N+   F   R + + +  G  IIN +TS   L H            
Sbjct: 122 AETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINXSTSQVGLLHPSYGIYAAAKAG 181
Query: 192 PEARG--LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
            EA    L+ +L  R I VN VAPGP  T L     S+E   +F    P++R G P ++A
Sbjct: 182 VEAXTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIA 241
Query: 250 PCYVFLACNHCSSYITGQVLHPN 272
               FLA     +++ GQVL  N
Sbjct: 242 GAVAFLAGPD-GAWVNGQVLRAN 263

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 33/272 (12%)
Query: 17  PGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGG-DSGIGRAVAHCYALEGATVAFTYVK 75
           PG  ++ E   +   H       L+GKV LVT    +GIG   A    LEGA V  +   
Sbjct: 2   PGSMNLSEAPKEIDGHGL-----LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56
Query: 76  SQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAA 135
            +   + ++ L  L   +        A+  D+   E    ++ + V   G++D+LVNNA 
Sbjct: 57  ERRLGETRDQLADLGLGRVE------AVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG 110
Query: 136 VQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRH---MNEGSAIINTTSVEPLWHSP 192
           +  +   V+  DEE  +RV    + S    TR +LR+   ++ G  I+N  SV   W + 
Sbjct: 111 LGGQTPVVDMTDEE-WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLG-WRAQ 168
Query: 193 EA---------------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV 237
            +               R  A++ VE G+R+N V+P       +  + S E   +  S+ 
Sbjct: 169 HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDE 228
Query: 238 PMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
              RA +P EVA    FLA ++ SSY+TG+V+
Sbjct: 229 AFGRAAEPWEVAATIAFLASDY-SSYMTGEVV 259

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 31/250 (12%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+ ALVTG   G+G A+A     +GA V      ++EEK        L+E      + 
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLH--GTREEK--------LKELAAELGER 57
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                A+L   E  K +  +     G +DILVNNA +  + G    + +E  + V   N+
Sbjct: 58  IFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGIT-RDGLFVRMSDEDWDAVLTVNL 116
Query: 160 FSHFFMTR---HSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
            S F +TR   H +     G  IIN TS+  +  +P               ++ LA ++ 
Sbjct: 117 TSVFNLTRELTHPMMRRRNGR-IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIA 175
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            R + VN +APG I + +      +++ A  G+ +PMKR G   ++A   V+LA +  ++
Sbjct: 176 SRNVTVNCIAPGFIESAMTGKLNEKQKDAIMGN-IPMKRMGVGADIAAAVVYLASDE-AA 233
Query: 263 YITGQVLHPN 272
           Y+TGQ LH N
Sbjct: 234 YVTGQTLHVN 243

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 31/250 (12%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+ ALVTG   G+G A+A     +GA V      ++EEK        L+E      + 
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLH--GTREEK--------LKELAAELGER 54
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                A+L   E  K +  +     G +DILVNNA +  + G    + +E  + V   N+
Sbjct: 55  IFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGIT-RDGLFVRMSDEDWDAVLTVNL 113
Query: 160 FSHFFMTR---HSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
            S F +TR   H +     G  IIN TS+  +  +P               ++ LA ++ 
Sbjct: 114 TSVFNLTRELTHPMMRRRNGR-IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIA 172
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            R + VN +APG I + +      +++ A  G+ +PMKR G   ++A   V+LA +  ++
Sbjct: 173 SRNVTVNCIAPGFIESAMTGKLNEKQKDAIMGN-IPMKRMGVGADIAAAVVYLASDE-AA 230
Query: 263 YITGQVLHPN 272
           Y+TGQ LH N
Sbjct: 231 YVTGQTLHVN 240

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           +VA+VTG   GIGRA+A   A  GA V  T   +  E  A+      ++A        + 
Sbjct: 29  QVAIVTGASRGIGRAIALELARRGAMVIGT---ATTEAGAEGIGAAFKQAGLEGRGAVLN 85
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           ++     D     +V+  +  +G +++LVNNA +     ++   D+E  + V  TN+ + 
Sbjct: 86  VNDATAVDA----LVESTLKEFGALNVLVNNAGITQDQLAMRMKDDE-WDAVIDTNLKAV 140
Query: 163 FFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
           F ++R  LR M +  G  I+N TSV     +P                R LA ++  RGI
Sbjct: 141 FRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGI 200
Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN VAPG I T +      +E+     +++P+ R G P ++A    FLA    + YITG
Sbjct: 201 TVNCVAPGFIDTDM-TKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQ-AGYITG 258
Query: 267 QVLHPN 272
             LH N
Sbjct: 259 TTLHVN 264

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 36/257 (14%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTS 95
           S  L GKVAL+TG  SG G  +A  +A  GA V      K+  E+ A E           
Sbjct: 4   SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---------G 54
Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
           DA   +A++AD+  + +    V+  ++ +GK+DILVNNA + +K  + E ++ E  +R+ 
Sbjct: 55  DA--ALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIV 112
Query: 156 RTNIFSHFFMTRHSLRHMNEGSA------IINTTSV--------------EPLWHSPEAR 195
             N+   + MT   + H  E  A      I+N  S                  W     +
Sbjct: 113 GVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTK 172
Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCY 252
            LA++L    IRV  + P    TPL+ +     SEE   +F   +PM R  +P ++A   
Sbjct: 173 ALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAA 232
Query: 253 VFLACNHCSSYITGQVL 269
            FL C+  +S ITG  L
Sbjct: 233 AFL-CSPQASMITGVAL 248

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 122/254 (48%), Gaps = 22/254 (8%)
Query: 32  HDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE 91
             Y     L+G+VA+VTGG +GIG+A+       G+ V     K +  K A + L+    
Sbjct: 8   RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQA-NL 66
Query: 92  AKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL 151
             T  A+  + I  ++  +E    +V   ++ +GKI+ LVNN   Q+ +   E I  +  
Sbjct: 67  PPTKQAR-VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS-PAEHISSKGW 124
Query: 152 ERVFRTNIFSHFFMTR--HSLRHMNEGSAIIN----TTSVEPL-WHSPEARG-------- 196
             V  TN+   F+M +  +S      G +I+N    T +  PL  HS  AR         
Sbjct: 125 HAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKS 184
Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF-GS--EVPMKRAGQPIEVAPCYV 253
           LAL+    GIR+N VAPG I++     ++     + F GS  ++P KR G P EV+    
Sbjct: 185 LALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC 244
Query: 254 FLACNHCSSYITGQ 267
           FL  +  +S+ITGQ
Sbjct: 245 FL-LSPAASFITGQ 257

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           + LR KV +VTG   GIGRA+A  +  EG+ V    +    E                  
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDH------------- 50
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                I  D+   +  K  +D +   YG I +LVNNA ++   G +E +      R+   
Sbjct: 51  -----IECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDV 104
Query: 158 NIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLALQL 201
           N+F +++ ++ ++ +M  +   +I+N +SV+    +  A              + +AL  
Sbjct: 105 NLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDY 164
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFS----------EEESAQFGSEVPMKRAGQPIEVAPC 251
               +R N V P  I TPL+  +            E++ +++G E PM+R G+P EVA  
Sbjct: 165 APL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 223
Query: 252 YVFLACNHCSSYITGQVLH 270
             FLA    +S+ITG  L+
Sbjct: 224 VAFLASRE-ASFITGTCLY 241

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           + LR KV +VTG   GIGRA+A  +  EG+ V    +    E                  
Sbjct: 11  SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDH------------- 57
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                I  D+   +  K  +D +   YG I +LVNNA ++   G +E +      R+   
Sbjct: 58  -----IECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDV 111
Query: 158 NIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLALQL 201
           N+F +++ ++ ++ +M  +   +I+N +SV+    +  A              + +AL  
Sbjct: 112 NLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDY 171
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFS----------EEESAQFGSEVPMKRAGQPIEVAPC 251
               +R N V P  I TPL+  +            E++ +++G E PM+R G+P EVA  
Sbjct: 172 APL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 230
Query: 252 YVFLACNHCSSYITGQVLH 270
             FLA    +S+ITG  L+
Sbjct: 231 VAFLASRE-ASFITGTCLY 248

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 25/247 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  KVALVT    GIG A+A   A +GA V    V S+++++   T+  L+     +   
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVV---VSSRKQENVDRTVATLQ----GEGLS 64
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                  +G  E+ +R+V   VN +G +DILV+NAAV    G++ +  EE  +++   N+
Sbjct: 65  VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 124
Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            +   MT+  +  M +  G +++  +SV      P                + LA++L  
Sbjct: 125 KATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAP 184
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE-VPMKRAGQPIEVAPCYVFLACNHCSS 262
           R IRVN +APG I T      + ++   ++  E + ++R G P + A    FL C+  +S
Sbjct: 185 RNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL-CSEDAS 243
Query: 263 YITGQVL 269
           YITG+ +
Sbjct: 244 YITGETV 250

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTG   GIGR +A   A    +V+     S+ +K     ++ ++    S   +   
Sbjct: 45  KVALVTGAGRGIGREIAKMLA---KSVSHVICISRTQKSCDSVVDEIK----SFGYESSG 97
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
            + D+   E    V+++++  +  +DILVNNA +  +      +  +  E V RTN+ S 
Sbjct: 98  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSL 156
Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPL--------WHSPEA------RGLALQLVERGI 206
           F++T+   + M  N    IIN +S+  L        + S +A      + LA +L  R I
Sbjct: 157 FYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNI 216
Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN +APG I + +     SE+      S +P  R G P EVA    FL+ +  S YI G
Sbjct: 217 TVNAIAPGFISSDM-TDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDK-SGYING 274
Query: 267 QVL 269
           +V 
Sbjct: 275 RVF 277

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 110/246 (44%), Gaps = 34/246 (13%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S +L GKVALV+GG  G G +       EGA V F  +  +E K     L         D
Sbjct: 2   SGRLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVHLD 61
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
              P             K  VD  V A+G + +LVNNA +    G++E+      +R+  
Sbjct: 62  VTQP----------AQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRILD 110
Query: 157 TNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPL-----WHSPEA-----RGL----ALQ 200
            N+   F   R  ++   E    +IIN +S+E L      H   A     RGL    AL+
Sbjct: 111 VNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALE 170
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L   GIRVN + PG + TP   + +  E+  Q      + RA +P+EV+   V+LA +  
Sbjct: 171 LGPSGIRVNSIHPGLVKTP--XTDWVPEDIFQ----TALGRAAEPVEVSNLVVYLASDE- 223
Query: 261 SSYITG 266
           SSY TG
Sbjct: 224 SSYSTG 229

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 109/247 (44%), Gaps = 27/247 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  ++ALVTG   GIGRA+A   A  GA VA  Y  S    D           +    K 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK- 84
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                AD+  +   + +   V+  +G++D+LVNNA +      +  +  +  + V   N+
Sbjct: 85  -----ADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDT-LLLRMKRDDWQSVLDLNL 138
Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
              F  +R + + M       IIN  SV     +P                + +A +L  
Sbjct: 139 GGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELAS 198
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           RGI VN VAPG I T +     SE  + +    +P+ R G+  EVA    FLA +  ++Y
Sbjct: 199 RGITVNAVAPGFIATDMT----SELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAY 254
Query: 264 ITGQVLH 270
           ITGQV++
Sbjct: 255 ITGQVIN 261

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 35/258 (13%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           +N+L+GKVALVTGG SG+G  V      EGA VAF+ +   E    Q   E+        
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI--NEAAGQQLAAEL-------- 50
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +  M +  D+  + +   V+  V    G +++LVNNA +    G +E    E   R+ +
Sbjct: 51  GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP-GDMETGRLEDFSRLLK 109
Query: 157 TNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWH---------------SPEARGLALQ 200
            N  S F   +  +  M E G +IIN  SV   W                S   R  AL 
Sbjct: 110 INTESVFIGCQQGIAAMKETGGSIINMASVSS-WLPIEQYAGYSASKAAVSALTRAAALS 168
Query: 201 LVERG--IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP-MKRAGQ---PIEVAPCYVF 254
             ++G  IRVN + P  I+TP++ +S  +  S +     P + RAG+   P  +A   +F
Sbjct: 169 CRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF 228
Query: 255 LACNHCSSYITGQVLHPN 272
           LA +  SS ++G  LH +
Sbjct: 229 LASDE-SSVMSGSELHAD 245

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 29/252 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK ALVTG   G+G A A   A  GA V    +++    ++ +TL       T    D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL-------TRKGYD 59
Query: 100 PMAISADLGFDENCKRVVDEVVNAYG-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              ++ D+  DE         ++A G  +DIL+NNA +QY+   V E++ E  ++V  TN
Sbjct: 60  AHGVAFDV-TDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMV-ELELENWQKVIDTN 117
Query: 159 IFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE------ARG--------LALQL 201
           + S F ++R + + M   N G  IIN  S+      P       A+G        +A + 
Sbjct: 118 LTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEW 177
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
            +  I+ N + PG I T +  +   +++  +   S  P +R G+P E+    +FL+ +  
Sbjct: 178 AQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLS-SKA 236
Query: 261 SSYITGQVLHPN 272
           S YI GQ+++ +
Sbjct: 237 SDYINGQIIYVD 248

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 38/255 (14%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L+ K+A++TGG +GIGRA+A  +A+EGA +A   +    E +A         A  + 
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---------AIRNL 52
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +  + +  D+    + +    +V++ +G+ DILVNNA + Y     +E+  E+ ++ F 
Sbjct: 53  GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGI-YPLIPFDELTFEQWKKTFE 111
Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA---------------RGLAL 199
            N+ S F M +  +  M  N    IIN TS    W   EA               R LA 
Sbjct: 112 INVDSGFLMAKAFVPGMKRNGWGRIINLTSTT-YWLKIEAYTHYISTKAANIGFTRALAS 170
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP-----MKRAGQPIEVAPCYVF 254
            L + GI VN +AP  + T    +S     SA F   +P     + R   P+++     F
Sbjct: 171 DLGKDGITVNAIAPSLVRTATTEAS---ALSAMF-DVLPNMLQAIPRLQVPLDLTGAAAF 226
Query: 255 LACNHCSSYITGQVL 269
           LA +  +S+ITGQ L
Sbjct: 227 LASDD-ASFITGQTL 240

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 35/255 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           + GKVA++TG  SGIG A+A  +A EGA +          +      E  R  K      
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLV------ARQVDRLHEAARSLKEKFGVR 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + ++ D+   E    VV+ V +++G  DILVNNA       ++ E  +E+ +  +  ++
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE-TIMEAADEKWQFYWELHV 117
Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTS---VEPLWHSPE-----------ARGLALQLVE 203
            +   + R  +  M    G AII+  S   V+PLW+ P            ++ LA ++++
Sbjct: 118 MAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-----------EVPMKRAGQPIEVAPCY 252
             IRVN + PG I TP    +  E      G              P+KR   P E+A  +
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFF 237
Query: 253 VFLACNHCSSYITGQ 267
           VFL C+  ++Y  G 
Sbjct: 238 VFL-CSERATYSVGS 251

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 35/258 (13%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +   K  ++TG  +GIGR  A  +A EGA V  T   S+     +ET +I+ ++  S+ K
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER---LEETRQIILKSGVSE-K 58
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY-----KAGSVEEIDEERLER 153
              ++ AD+  ++   ++++  +  +GKID+LVNNA           G+ + ID     +
Sbjct: 59  QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGID--IYHK 116
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSA-IINTTSV--------EPLWHSPE-------ARGL 197
             + N+ +   MT+    H+      I+N +S+        + L+++          R  
Sbjct: 117 TLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRST 176
Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ----FGSE----VPMKRAGQPIEVA 249
           A+ L + GIRVN V+PG + T    +    ++++Q    F +     +P+  AG+P  +A
Sbjct: 177 AIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIA 236
Query: 250 PCYVFLACNHCSSYITGQ 267
              +FLA  + S YI GQ
Sbjct: 237 NIILFLADRNLSFYILGQ 254

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 38/259 (14%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L  K+A++TG  SGIG A A  +  EGA V  T       KD      +L  A    
Sbjct: 24  TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFIT----GRRKD------VLDAAIAEI 73
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGS---VEEIDEERLER 153
               + I AD        R+ ++V    G+ID+L  NA      GS   + E+ EE+ + 
Sbjct: 74  GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG----GGSXLPLGEVTEEQYDD 129
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLAL 199
            F  N+    F  + +L  +  GS+++ T S      +P               AR   L
Sbjct: 130 TFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWIL 189
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG------SEVPMKRAGQPIEVAPCYV 253
            L +RGIR+N ++PGP  T  +     ++   Q G      ++VP  R G+  EVA   +
Sbjct: 190 DLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAAL 249
Query: 254 FLACNHCSSYITGQVLHPN 272
           FLA +  SS++TG  L  +
Sbjct: 250 FLASDD-SSFVTGAELFVD 267

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 28/248 (11%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L G+ A+VTG  SGIGRA+AH YA  GA V   + ++   K+  +  EI     +++  
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHV-LAWGRTDGVKEVAD--EIADGGGSAE-- 82
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A+ ADL   E    V +E+  A  ++D+LVNNA +  +A   EE+   R   V   N
Sbjct: 83  ---AVVADLADLEGAANVAEELA-ATRRVDVLVNNAGIIARA-PAEEVSLGRWREVLTVN 137
Query: 159 IFSHFFMTRH-SLRHMNEGSAIINTTS----------VEPLWHSPEA-----RGLALQLV 202
           + + + ++R      +  GS  I T +          V     S  A     R LA +  
Sbjct: 138 LDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWA 197
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            RG+ VN +APG + T    +  +++E +A+  + +P  R   P ++    VFLA +  +
Sbjct: 198 GRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASD-AA 256
Query: 262 SYITGQVL 269
           SY+ GQVL
Sbjct: 257 SYVHGQVL 264

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 114/276 (41%), Gaps = 29/276 (10%)
Query: 11  QKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVA 70
           + Q   PG   V+E        + K    L  +  LVTGG  GIGR +A  +A  GA VA
Sbjct: 13  EAQTQGPGSMLVVE---SAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVA 69
Query: 71  FTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDIL 130
                    +  +E   +  E     A + + +  D+    +C      VV+A+G +D++
Sbjct: 70  VA------ARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVV 123
Query: 131 VNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEP 187
             NA + +    ++ +  E+L  V   N+    +  +  L  +     G  I+ ++   P
Sbjct: 124 CANAGI-FPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGP 182
Query: 188 LWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF 233
           +   P                R  A++L  RG+ VN + PG I T  +     EE  +  
Sbjct: 183 VTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL-VDMGEEYISGM 241
Query: 234 GSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
              +PM   G P+++     FLA +  + YITGQ +
Sbjct: 242 ARSIPMGMLGSPVDIGHLAAFLATDE-AGYITGQAI 276

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 30/246 (12%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK AL+TG  +GIG+ VA  YA  GA VA     S       + L+++ +        
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHS-------DALQVVADEIAGVGGK 82
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + I  D+   +  + ++D++    G IDI V NA +     ++ ++  E  +R+  TN+
Sbjct: 83  ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGI-VSVQAMLDMPLEEFQRIQDTNV 141
Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEP-LWHSPE---------------ARGLALQ 200
              F   + + R M +   G  II T S+   + + P+                + +A++
Sbjct: 142 TGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVE 201
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L    IRVN V+PG I T L+      +  A +  ++P+ R G+P E+   Y++LA +  
Sbjct: 202 LAPHQIRVNSVSPGYIRTELVEP--LADYHALWEPKIPLGRMGRPEELTGLYLYLA-SAA 258
Query: 261 SSYITG 266
           SSY+TG
Sbjct: 259 SSYMTG 264

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 26/259 (10%)
Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
           T + Y  S  L+GKVALVTG   GIG+A+A      GA V  T   +   +   ETL+  
Sbjct: 15  TENLYFQSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLK-- 72
Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
                ++  +   +  D+  DE+    ++ +    G+  I+VNNA +      V   D+E
Sbjct: 73  -----ANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDE 127
Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSV--------EPLWHSPEA----- 194
             + V  TN+ S + +++  LR M +     IIN  SV        +  + + +A     
Sbjct: 128 WFD-VVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGF 186
Query: 195 -RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            R LA ++  R I VN VAPG I T +       +  A  G ++P+ R GQ  E+A    
Sbjct: 187 TRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLG-QIPLGRLGQAEEIAKVVG 245
Query: 254 FLACNHCSSYITGQVLHPN 272
           FLA +   +Y+TG  +  N
Sbjct: 246 FLASDGA-AYVTGATVPVN 263

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 35/255 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           + GKVA++TG  SGIG A+A  +A EGA +          +      E  R  K      
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLV------ARQVDRLHEAARSLKEKFGVR 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + ++ D+   E    VV+ V +++G  DILVNNA       ++ E  +E+ +  +   +
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE-TIMEAADEKWQFYWELLV 117
Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTS---VEPLWHSPE-----------ARGLALQLVE 203
            +   + R  +  M    G AII+  S   V+PLW+ P            ++ LA ++++
Sbjct: 118 MAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-----------EVPMKRAGQPIEVAPCY 252
             IRVN + PG I TP    +  E      G              P+KR   P E+A  +
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFF 237
Query: 253 VFLACNHCSSYITGQ 267
           VFL C+  ++Y  G 
Sbjct: 238 VFL-CSERATYSVGS 251

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 37/240 (15%)
Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LVTGG+ GIG A+A  +A  G  VA TY +S E  +                   +A+  
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITY-RSGEPPEGF-----------------LAVKC 66
Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
           D+   E  ++   E+   +G +++L+ NA V  K   +  + EE    V  TN+   F +
Sbjct: 67  DITDTEQVEQAYKEIEETHGPVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNLTGTFRV 125
Query: 166 TRHSLRHM---NEGSAIINTTSVEPLWHSPE-------------ARGLALQLVERGIRVN 209
            + + R M    +G  ++ ++ V  L  + +             AR LA +L  R I  N
Sbjct: 126 VKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFN 185
Query: 210 GVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
            VAPG + T +     ++E+ A   S+VP+ R  +P E+A    FLA +  +SYITG V+
Sbjct: 186 VVAPGFVDTDM-TKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDD-ASYITGAVI 243

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 111/254 (43%), Gaps = 34/254 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVA+VTG  SGIG  +A   A +GA +           DA E  ++           
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG-----DAAEIEKVRAGLAAQHGVK 56
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   ADL   E  + +VD  V   G+IDILVNNA +Q+ A  +E+   E+ + +   N+
Sbjct: 57  VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNL 115
Query: 160 FSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            + F  T  +L HM +     IIN  S   L  S                 +  AL+   
Sbjct: 116 SAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAG 175
Query: 204 RGIRVNGVAPGPIWTPLIPSSFS--------EEESAQ---FGSEVPMKRAGQPIEVAPCY 252
           +GI  N + PG + TPL+    S        ++E+A       + P  +   P ++    
Sbjct: 176 QGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA 235
Query: 253 VFLACNHCSSYITG 266
           VFLA +  ++ ITG
Sbjct: 236 VFLASD-AAAQITG 248

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 39/260 (15%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL G+VAL+TGG SG+GRA+   +  EGA VA             ++ E LRE + +   
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVL----------DKSAERLRELEVAHGG 51
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER----V 154
           + + +  D+   ++ KR  +  + A+GKID L+ NA +   + ++ ++ E++++     +
Sbjct: 52  NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDI 111
Query: 155 FRTNIFSHFFMTRHSLRHM--NEGSAIINTTSV-------EPLWHSPE------ARGLAL 199
           F  N+  +    +  L  +  + GS +   ++         PL+ + +       R +A 
Sbjct: 112 FHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAF 171
Query: 200 QLVERGIRVNGVAPGPIWTPLI-PSSFSEEESA--------QFGSEVPMKRAGQPIEVAP 250
           +L    +RVNGVAPG + T L  PSS    E +           S +P+ R     E   
Sbjct: 172 ELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTG 230
Query: 251 CYVFLACNHCSSYITGQVLH 270
            YVF A    S   TG +L+
Sbjct: 231 AYVFFATRGDSLPATGALLN 250

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 26/249 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  KVALVTG   GIG  VAH  A +GATV    V +   + + E  E   + K   A+ 
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATV----VGTATSQASAEKFENSXKEKGFKARG 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   +D+   E+ +    E+      IDILVNNA +  +        E+  + V  TN+
Sbjct: 59  LVLNISDI---ESIQNFFAEIKAENLAIDILVNNAGIT-RDNLXXRXSEDEWQSVINTNL 114
Query: 160 FSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            S F  ++  +R   +     II+  SV     +P               ++ LA ++  
Sbjct: 115 SSIFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVAS 174
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           R I VN VAPG I T       ++E+ +   +++P  + G+P ++A    FLA    + Y
Sbjct: 175 RNITVNVVAPGFIATDX-TDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE-AKY 232
Query: 264 ITGQVLHPN 272
           ITGQ LH N
Sbjct: 233 ITGQTLHVN 241

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 35/250 (14%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYAL-EGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           L+ KV +VTG  SGIGRA+A  +AL +   VA   ++ +  +  QE    LR       K
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQE----LRGM----GK 56
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           + + + AD+   ++ +  V      Y +ID+L NNA +      V E+ +E  ERV   N
Sbjct: 57  EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVN 116
Query: 159 IFSHFFMTRHSLRHM-NEG-SAIINTTSVEPLWHSPEA--------------RGLALQLV 202
           ++S F+ +R  +  M  +G   I+NT S+  +                    R +A    
Sbjct: 117 LYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG 176
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMK------RAGQPIEVAPCYVFLA 256
           ++GIR   V PG + T +        + ++ G     K      R  +P ++A   VFLA
Sbjct: 177 DQGIRAVAVLPGTVKTNI---GLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLA 233
Query: 257 CNHCSSYITG 266
            +  +S++ G
Sbjct: 234 SDE-ASFVNG 242

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 115/254 (45%), Gaps = 48/254 (18%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVA+VTGG SGIG AV       GA V    +  + + +  +  +I              
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKI-------------- 60
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              D+  +E  K  V++    YG+IDILVNNA ++ +   +     E   R+   N+   
Sbjct: 61  ---DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE-QYSPLHLTPTEIWRRIIDVNVNGS 116
Query: 163 FFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA--------------RGLALQLVERG 205
           + M ++++  M     GS IIN  SV+    +  A              R +A+    + 
Sbjct: 117 YLMAKYTIPVMLAIGHGS-IINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPK- 174
Query: 206 IRVNGVAPGPIWTPLIPSS----FSEEESA------QFGSEVPMKRAGQPIEVAPCYVFL 255
           IR N V PG I TP++  +      E+E+A      ++G + PM R G+P EVA    FL
Sbjct: 175 IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFL 234
Query: 256 ACNHCSSYITGQVL 269
           A +  SS+ITG  L
Sbjct: 235 ASDR-SSFITGACL 247

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
           T + Y  SN +   V LVTG   GIGRA+A   A +G  +   Y   ++   AQETL   
Sbjct: 15  TENLYFQSNAMSRSV-LVTGASKGIGRAIARQLAADGFNIGVHY--HRDAAGAQETL--- 68
Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
             A  ++  +   +S D+   E C+ V++  +  +G    +V+NA +   A +   +  +
Sbjct: 69  -NAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDA-AFPALSND 126
Query: 150 RLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPL--------WHSPEA---- 194
             + V  TN+ S + + +  +  M    +G  II  +SV  +        + + +A    
Sbjct: 127 DWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIG 186
Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
             + LA++L +R I VN +APG I T +I    S  + A   S +PMKR GQ  EVA   
Sbjct: 187 ATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAM--SMIPMKRMGQAEEVAGLA 244
Query: 253 VFLACNHCSSYITGQVLHPN 272
            +L  +  + Y+T QV+  N
Sbjct: 245 SYLMSD-IAGYVTRQVISIN 263

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 34/254 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVA+VTG  SGIG  +A   A +GA +           DA E  ++           
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG-----DAAEIEKVRAGLAAQHGVK 56
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   ADL   E  + +VD  V   G+IDILVNNA +Q+ A  +E+   E+ + +   N+
Sbjct: 57  VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNL 115
Query: 160 FSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            + F  T  +L HM +     IIN  S   L  S                 +  AL+   
Sbjct: 116 SAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAG 175
Query: 204 RGIRVNGVAPGPIWTPLIPSSFS--------EEESAQ---FGSEVPMKRAGQPIEVAPCY 252
           +GI  N + PG + +PL+    S        ++E+A       + P  +   P ++    
Sbjct: 176 QGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA 235
Query: 253 VFLACNHCSSYITG 266
           VFLA +  ++ ITG
Sbjct: 236 VFLASD-AAAQITG 248

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 40/255 (15%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+ ALVTG   G+GRA+A   A+ GA +    +   +     +T++  R        D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARI---LINGTDPSRVAQTVQEFRNV----GHD 76
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGK-------IDILVNNAAVQYKAGSVEEIDEERLE 152
             A++    FD   +    E++ A+ +       +DILVNNA +Q++   + E++    +
Sbjct: 77  AEAVA----FDVTSE---SEIIEAFARLDEQGIDVDILVNNAGIQFRKPMI-ELETADWQ 128
Query: 153 RVFRTNIFSHFFMTRHSLRHM---------NEGS-------AIINTTSVEPLWHSPEARG 196
           RV  TN+ S F + R + + M         N GS       A +   +V         R 
Sbjct: 129 RVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRA 188
Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFL 255
           +A +  + GI+ N + PG + T +  +     E  A   +  P KR G+P E+    VFL
Sbjct: 189 MAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFL 248
Query: 256 ACNHCSSYITGQVLH 270
           + +  S Y+ GQ+++
Sbjct: 249 SAS-ASDYVNGQIIY 262

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 34/254 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVA+VTG  SGIG  +A   A +GA +           DA E  ++           
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG-----DAAEIEKVRAGLAAQHGVK 56
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   ADL   E  + +VD  V   G+IDILVNNA +Q+ A  +E+   E+ + +   N+
Sbjct: 57  VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNL 115
Query: 160 FSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            + F  T  +L HM +     IIN  S   L  S                 +  AL+   
Sbjct: 116 SAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAG 175
Query: 204 RGIRVNGVAPGPIWTPLIPSSFS--------EEESAQ---FGSEVPMKRAGQPIEVAPCY 252
           +GI  N + PG +  PL+    S        ++E+A       + P  +   P ++    
Sbjct: 176 QGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA 235
Query: 253 VFLACNHCSSYITG 266
           VFLA +  ++ ITG
Sbjct: 236 VFLASD-AAAQITG 248

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 28/243 (11%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM--A 102
           AL+TG   GIGRA+A   A +G  +A  Y +++E+ +           +      P+   
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAE-------EARRRGSPLVAV 56
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + A+L   E    +V +     G +D LVNNA +      V   DE+  E V   N+ + 
Sbjct: 57  LGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDED-WEAVLEANLSAV 115
Query: 163 FFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
           F  TR +++ M +     I+N TSV  +  +P                R +A +  +RGI
Sbjct: 116 FRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGI 175
Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN VAPG I T +      +E    +  ++P  R G+P EVA    FL  +  + YITG
Sbjct: 176 TVNAVAPGFIETEM-TERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFL-VSEKAGYITG 233
Query: 267 QVL 269
           Q L
Sbjct: 234 QTL 236

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 28/251 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G  ALVTGG  GIG  +    A  GA+V   Y  S+ +K+  + L   R    S    
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASV---YTCSRNQKELNDCLTQWR----SKGFK 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAA-VQYKAGSVEEIDEERLERVFRT 157
             A   DL      + +++ V N + GK++ILVNNA  V YK      +++  L      
Sbjct: 59  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF 118
Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
               H  +  H     +E   ++  +SV      P                R LA +  +
Sbjct: 119 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 178
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQ----FGSEVPMKRAGQPIEVAPCYVFLACNH 259
             IRVNGV PG I T L+  +  + E  +          ++R G+P E+A    FL C  
Sbjct: 179 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFL-CFP 237
Query: 260 CSSYITGQVLH 270
            +SY+TGQ+++
Sbjct: 238 AASYVTGQIIY 248

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 28/251 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G  ALVTGG  GIG  +    A  GA+V   Y  S+ +K+  + L   R    S    
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASV---YTCSRNQKELNDCLTQWR----SKGFK 59
Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAA-VQYKAGSVEEIDEERLERVFRT 157
             A   DL      + +++ V N + GK++ILVNNA  V YK      +++  L      
Sbjct: 60  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF 119
Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
               H  +  H     +E   ++  +SV      P                R LA +  +
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQ----FGSEVPMKRAGQPIEVAPCYVFLACNH 259
             IRVNGV PG I T L+  +  + E  +          ++R G+P E+A    FL C  
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFL-CFP 238
Query: 260 CSSYITGQVLH 270
            +SY+TGQ+++
Sbjct: 239 AASYVTGQIIY 249

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 110/249 (44%), Gaps = 32/249 (12%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT---SDAKD 99
           +VA+VTG  SG G A+A  +   G  VA   + +       ETLE    A+T   + A  
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSA-------ETLE--ETARTHWHAYADK 53
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV--QYKAGSVEEIDEERLERVFRT 157
            + + AD+  + +    +   +  +G ID+LVNNA +    +AG +     E+ ++V   
Sbjct: 54  VLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113
Query: 158 NIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSP------EARGLALQLVE------ 203
           N+   F   R  L HM       I+N  SV  L   P       ++G  LQL +      
Sbjct: 114 NVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY 173
Query: 204 --RGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
              GIR N V PG I TP+      + E   Q  + +P K  G   +VA   +FLA    
Sbjct: 174 AGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGED- 232
Query: 261 SSYITGQVL 269
           ++Y+ G  L
Sbjct: 233 ATYVNGAAL 241

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           + GKVALVTG   GIGRA A    L+GA VA      +     +  L      +  + + 
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH-----EQFEPQK 59
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + I  D+   +  +    +VV+ +G++DILVNNA V          +E+  E+  + N+
Sbjct: 60  TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINL 110
Query: 160 FSHFFMTRHSLRHMN-----EGSAIINTTSV--------EPLWHSPE--------ARGLA 198
            S    T   L +M+     EG  IIN +S+        +P++ + +        +  LA
Sbjct: 111 VSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA 170
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF 233
             L+  G+R+N + PG + T ++ S   EE   Q+
Sbjct: 171 ANLMNSGVRLNAICPGFVNTAILESIEKEENMGQY 205

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 27/261 (10%)
Query: 30  TSHDYKPSNKLR--GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLE 87
           T + Y  SN ++  GK  L+TG   GIG  +A   A  G  V   Y  + E  DA     
Sbjct: 15  TENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADA----- 69
Query: 88  ILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID 147
            L+            I  D   + +    +  +V + G +  LVNNA V     ++ ++ 
Sbjct: 70  -LKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAI-KMK 127
Query: 148 EERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSV--------EPLWHSPE---- 193
            E    V   N+ S F   R +L+ M++    +++N  S+        +  + + +    
Sbjct: 128 TEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMI 187
Query: 194 --ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
             ++  A +   R IR N V PG I T +  ++  +E  A +   +P+ R G   EVA  
Sbjct: 188 AMSKSFAYEGALRNIRFNSVTPGFIETDM-NANLKDELKADYVKNIPLNRLGSAKEVAEA 246
Query: 252 YVFLACNHCSSYITGQVLHPN 272
             FL  +H SSYITG+ L  N
Sbjct: 247 VAFLLSDH-SSYITGETLKVN 266

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 30/257 (11%)
Query: 31  SHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR 90
           S  Y+    L   VA+VTG  +GIGRA+A  +A  GA+V  T +KS+    A+     +R
Sbjct: 1   SMSYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSE---GAEAVAAAIR 57
Query: 91  EAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID--E 148
           +A        + +  ++  +++ + V+   ++ +GKI +LVNNA      G  +  D   
Sbjct: 58  QA----GGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAG----GGGPKPFDMPM 109
Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVE--------PLWHSPEA---- 194
              E  F+ N+FS F +++ +  HM +  G AI+N +S+           + S +A    
Sbjct: 110 SDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNH 169
Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
             R +A  +   GIRVN +APG I T  + +  + E         P+ R G+  ++A   
Sbjct: 170 LTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAA 229
Query: 253 VFLACNHCSSYITGQVL 269
           +FL C+  +++I+GQVL
Sbjct: 230 LFL-CSPAAAWISGQVL 245

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L GK ALVTG   GIG+A+A   A +GATV  + + ++  K A  ++          
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---------- 50
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAA-VQYKAGSVEEIDEERLERVF 155
            K   AI+AD+    + K +  E+    G IDILVNNA+ V + A   +++D +   ++ 
Sbjct: 51  GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVA--WDDVDLDHWRKII 108
Query: 156 RTNIFSHFFMTRHS---LRHMNEGSAIINTTSVEPLWHSPE--------------ARGLA 198
             N+   F +TR     +R   +   +I+  S      +P                R LA
Sbjct: 109 DVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALA 168
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            +L +  I  N V PG I +  + +S   E          MK  GQP  +A    FLA +
Sbjct: 169 TELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASD 228
Query: 259 HCSSYITGQVLH 270
             + +ITGQ L+
Sbjct: 229 D-ARWITGQTLN 239

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 30/253 (11%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           ++L GK+A+VTG  SGIGRA A  +A EGA V  T       ++     E+  E      
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVT------ARNGNALAELTDEIAGGGG 57
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
           +     + D+G +   + +V+  V  +G +D   NNA      G +  +  E       T
Sbjct: 58  EAAAL-AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDT 116
Query: 158 NIFSHFFMTRH---SLRHMNEGSAIINTT---------SVEPLWHSPEA-----RGLALQ 200
           N+ S F   ++   ++  +  GS    ++          V P   S        + LA++
Sbjct: 117 NLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVE 176
Query: 201 LVERGIRVNGVAPGPIWTPL----IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           L  RGIRVN + PG   TP     +P +  E      G    +KR  +P E+A   ++LA
Sbjct: 177 LGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH-ALKRIARPEEIAEAALYLA 235
Query: 257 CNHCSSYITGQVL 269
            +  +S++TG  L
Sbjct: 236 SD-GASFVTGAAL 247

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 109/246 (44%), Gaps = 40/246 (16%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           +R K  LV     GIGRAVA   + EGA V  T     EE        +L+ +       
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEV--TICARNEE--------LLKRSGHRYVVC 66
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +    DL F++     V EV       DILV NA    KAG  +E+  E  +    +  
Sbjct: 67  DLRKDLDLLFEK-----VKEV-------DILVLNAG-GPKAGFFDELTNEDFKEAIDSLF 113
Query: 160 FSHFFMTRHSLRHMNEGS--AIINTTS------VEPLWHSPEAR--------GLALQLVE 203
            +   + R+ L  M E     I+  TS      +E L+ S  AR         L+ ++  
Sbjct: 114 LNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP 173
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
            GI VN VAPG   T  +    SEE+  Q  S++PM+R  +P E+A    FL C+  +SY
Sbjct: 174 YGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFL-CSEKASY 232
Query: 264 ITGQVL 269
           +TGQ +
Sbjct: 233 LTGQTI 238

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 49/262 (18%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA------KTSD 96
           +VALVTG  SGIG  +A     EG  V   +V ++ E+  + TL+ LREA      +T D
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCD 83
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +    I A          +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  
Sbjct: 84  VRSVPEIEA----------LVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVE 132
Query: 157 TNIFSHFFMTRHSLR---HMNEGSA-IINTTSV---EPLWHSPE-----------ARGLA 198
           TN+   F +T+  L+    +  G+  I+N  S    + L H+              + L 
Sbjct: 133 TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALG 192
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPS----------SFSEEESAQFGSEVPMKRAGQPIEV 248
           L+L   GI VN V PG + TP+  S            +EE   +  + VP+ R  QP EV
Sbjct: 193 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 252
Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    +L     ++ +T Q L+
Sbjct: 253 AEMVAYL-IGPGAAAVTAQALN 273

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 36/249 (14%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+ K  L+TG   GIGRA    +A EGA +    ++    ++A E +         D  
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA--HPVVXDVA 59
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           DP   S + GF E    +        G++D +V+ A +  +     +   E  E V R N
Sbjct: 60  DPA--SVERGFAEALAHL--------GRLDGVVHYAGIT-RDNFHWKXPLEDWELVLRVN 108
Query: 159 IFSHFFMTR---HSLRHMNEGSAIINTTSV------EPLWHSPEA------RGLALQLVE 203
           +   F + +    + R  N GS ++  + V      +  + +  A      R LAL+L  
Sbjct: 109 LTGSFLVAKAASEAXREKNPGSIVLTASRVYLGNLGQANYAASXAGVVGLTRTLALELGR 168
Query: 204 RGIRVNGVAPGPI---WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
            GIRVN +APG I    T  +P    E+  A      P+ RAG+P+EVA   +FL  +  
Sbjct: 169 WGIRVNTLAPGFIETRXTAKVPEKVREKAIAA----TPLGRAGKPLEVAYAALFLLSDE- 223
Query: 261 SSYITGQVL 269
           SS+ITGQVL
Sbjct: 224 SSFITGQVL 232

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 49/262 (18%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA------KTSD 96
           +VALVTG  SGIG  +A     EG  V   +V ++ E+  + TL+ LREA      +T D
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCD 83
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +    I A          +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  
Sbjct: 84  VRSVPEIEA----------LVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLDVVE 132
Query: 157 TNIFSHFFMTRHSLR---HMNEGSA-IINTTSV---EPLWHSPE-----------ARGLA 198
           TN+   F +T+  L+    +  G+  I+N  S    + + H+              + L 
Sbjct: 133 TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG 192
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPS----------SFSEEESAQFGSEVPMKRAGQPIEV 248
           L+L   GI VN V PG + TP+  S            +EE   +  + VP+ R  QP EV
Sbjct: 193 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 252
Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    +L     ++ +T Q L+
Sbjct: 253 AEMVAYL-IGPGAAAVTAQALN 273

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 49/262 (18%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA------KTSD 96
           +VALVTG  SGIG  +A     EG  V   +V ++ E+  + TL+ LREA      +T D
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCD 79
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +    I A          +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  
Sbjct: 80  VRSVPEIEA----------LVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLDVVE 128
Query: 157 TNIFSHFFMTRHSLR---HMNEGSA-IINTTSV---EPLWHSPE-----------ARGLA 198
           TN+   F +T+  L+    +  G+  I+N  S    + + H+              + L 
Sbjct: 129 TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG 188
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPS----------SFSEEESAQFGSEVPMKRAGQPIEV 248
           L+L   GI VN V PG + TP+  S            +EE   +  + VP+ R  QP EV
Sbjct: 189 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 248
Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    +L     ++ +T Q L+
Sbjct: 249 AEMVAYL-IGPGAAAVTAQALN 269

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 119/262 (45%), Gaps = 49/262 (18%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA------KTSD 96
           +VALVTG  SGIG  +A     EG  V   +V ++ E+  + TL+ LREA      +T D
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCD 83
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +    I A          +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  
Sbjct: 84  VRSVPEIEA----------LVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVE 132
Query: 157 TNIFSHFFMTRHSLR---HMNEGSA-IINTTSV---EPLWHSPE-----------ARGLA 198
           TN+   F +T+  L+    +  G+  I+N  S    + + H+              + L 
Sbjct: 133 TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG 192
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSS---FS-------EEESAQFGSEVPMKRAGQPIEV 248
           L+L   GI VN V PG + TP+  S    FS       EE   +  + VP+ R  QP EV
Sbjct: 193 LELARTGITVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEV 252
Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    +L     ++ +T Q L+
Sbjct: 253 AEMVAYL-IGPGAAAVTAQALN 273

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 36/275 (13%)
Query: 23  MEPTPQFTSHDYKPSNK-LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD 81
           M P+   TS     ++K L GKVAL TG   GIGR +A      GA+V   Y  S +  +
Sbjct: 1   MAPSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAE 60
Query: 82  AQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG 141
                E++ E K   A+  +AI AD+        + D+ V+ +G +D +++N+ ++    
Sbjct: 61  -----EVVAELKKLGAQG-VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD 114
Query: 142 SVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV---------EPLWHSP 192
            + E+ +E  ++VF  N    FF+ +  L+H   G  II T+S+           L+   
Sbjct: 115 EL-EVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGS 173
Query: 193 EA------RGLALQLVERGIRVNGVAPGPIWTPLI--------PSSFS----EEESAQFG 234
           +A      R  A+    +G+ VN +APG + T +         P  +     E+      
Sbjct: 174 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLA 233
Query: 235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
           +  P+KR G P ++      L C   S +I GQV+
Sbjct: 234 NMNPLKRIGYPADIGRAVSAL-CQEESEWINGQVI 267

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 49/262 (18%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA------KTSD 96
           +VALVTG  SGIG  +A     EG  V   +V ++ E+  + TL+ LREA      +T D
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCD 79
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +    I A          +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  
Sbjct: 80  VRSVPEIEA----------LVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVE 128
Query: 157 TNIFSHFFMTRHSLR---HMNEGSA-IINTTSV---EPLWHSPE-----------ARGLA 198
           TN+   F +T+  L+    +  G+  I+N  S    + + H+              + L 
Sbjct: 129 TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG 188
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPS----------SFSEEESAQFGSEVPMKRAGQPIEV 248
           L+L   GI VN V PG + TP+  S            +EE   +  + VP+ R  QP EV
Sbjct: 189 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 248
Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    +L     ++ +T Q L+
Sbjct: 249 AEMVAYL-IGPGAAAVTAQALN 269

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 39/257 (15%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT-SDAKDPM 101
           +VALVTG  SGIG  +A     EG  V   +V ++ E+  + TL+ LREA   +D +   
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGR--- 80
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
             + D+      + +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  TN+  
Sbjct: 81  --TCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTG 137
Query: 162 HFFMTRHSLR---HMNEGSA-IINTTSV---EPLWHSPE-----------ARGLALQLVE 203
            F +T+  L+    +  G+  I+N  S    + + H+              + L L+L  
Sbjct: 138 VFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 197
Query: 204 RGIRVNGVAPGPIWTPLIPS----------SFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            GI VN V PG + TP+  S            +EE   +  + VP+ R  QP EVA    
Sbjct: 198 TGITVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA 257
Query: 254 FLACNHCSSYITGQVLH 270
           +L     ++ +T Q L+
Sbjct: 258 YL-IGPGAAAVTAQALN 273

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 39/257 (15%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT-SDAKDPM 101
           +VALVTG  SGIG  +A     EG  V   +V ++ E+  + TL+ LREA   +D +   
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGR--- 80
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
             + D+      + +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  TN+  
Sbjct: 81  --TCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTG 137
Query: 162 HFFMTRHSLR---HMNEGSA-IINTTSV---EPLWHSPE-----------ARGLALQLVE 203
            F +T+  L+    +  G+  I+N  S    + + H+              + L L+L  
Sbjct: 138 VFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 197
Query: 204 RGIRVNGVAPGPIWTPLIPS----------SFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            GI VN V PG + TP+  S            +EE   +  + VP+ R  QP EVA    
Sbjct: 198 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA 257
Query: 254 FLACNHCSSYITGQVLH 270
           +L     ++ +T Q L+
Sbjct: 258 YL-IGPGAAAVTAQALN 273

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 49/262 (18%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA------KTSD 96
           +VALVTG  SGIG  +A     EG  V   +V ++ E+  + TL+ LREA      +T D
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRV---FVCARGEEGLRTTLKELREAGVEADGRTCD 63
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +    I A          +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  
Sbjct: 64  VRSVPEIEA----------LVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVE 112
Query: 157 TNIFSHFFMTRHSLR---HMNEGSA-IINTTSV---EPLWHSPE-----------ARGLA 198
           TN+   F +T+  L+    +  G+  I+N  S    + + H+              + L 
Sbjct: 113 TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG 172
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPS----------SFSEEESAQFGSEVPMKRAGQPIEV 248
           L+L   GI VN V PG + TP+  S            +EE   +  + VP+ R  QP EV
Sbjct: 173 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 232
Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    +L     ++ +T Q L+
Sbjct: 233 AEMVAYL-IGPGAAAVTAQALN 253

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 32/256 (12%)
Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
           P   L G++ALVTGG  GIG+ +A      GA V   ++ +++ +   +T       + S
Sbjct: 23  PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARV---FICARDAEACADT-----ATRLS 74
Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
              D  AI ADL  +   +R+   +     ++DILVNNA   + A ++E       E+V 
Sbjct: 75  AYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGA-ALESYPVSGWEKVM 133
Query: 156 RTNIFSHFFMTRHSL-------------RHMNEGS-AIINTTSVEPLWHSPE-------A 194
           + N+ S F   +  L             R +N GS A I+    +   + P        +
Sbjct: 134 QLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLS 193
Query: 195 RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-EVPMKRAGQPIEVAPCYV 253
           R LA +LV   I VN +APG   + +     ++ ++ +  S  +PM R G+P E+A   +
Sbjct: 194 RMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAI 253
Query: 254 FLACNHCSSYITGQVL 269
            LA     +Y+TG V+
Sbjct: 254 SLA-GTAGAYMTGNVI 268

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 36/251 (14%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG   GIG  +A  +A +GATV    V       A E L+     + +D   
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG-----AAEDLK-----RVADKVG 260
Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             A++ D+  D+   ++   V   + GK+DILVNNA +  +   +  +DE+R + V   N
Sbjct: 261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT-RDKLLANMDEKRWDAVIAVN 319
Query: 159 IFSHFFMTRHSLRH--MNEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           + +   +T   + +  + EG  +I  +S+  +  +                A  LA  L 
Sbjct: 320 LLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLA 379
Query: 203 ERGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           ++GI +N VAPG I T +   IP + + E   +  S   + + GQP++VA    + A + 
Sbjct: 380 DKGITINAVAPGFIETKMTEAIPLA-TREVGRRLNS---LFQGGQPVDVAELIAYFA-SP 434
Query: 260 CSSYITGQVLH 270
            S+ +TG  + 
Sbjct: 435 ASNAVTGNTIR 445

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 107/262 (40%), Gaps = 41/262 (15%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GK AL+TG   GIGRA A  Y  EGATVA   +           +E  R+A      
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADID----------IERARQAAAEIGP 54
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A+  D+   ++    +   V   G +DILVNNAA+ +    + EI  E  E++F  N
Sbjct: 55  AAYAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAAL-FDLAPIVEITRESYEKLFAIN 113
Query: 159 IFSHFFM---TRHSLRHMNEGSAIINTTS--------VEPLWHSPEA------RGLALQL 201
           +    F              G  IIN  S        +  ++ + +A      +   L L
Sbjct: 114 VAGTLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDL 173
Query: 202 VERGIRVNGVAPGPI----WTPLIPSSFSE-------EESAQFGSEVPMKRAGQPIEVAP 250
           ++  I VN +APG +    W   + + F+        E+    G  VP  R G   ++  
Sbjct: 174 IKHRINVNAIAPGVVDGEHWDG-VDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTG 232
Query: 251 CYVFLACNHCSSYITGQVLHPN 272
             +FLA    S YI  Q  + +
Sbjct: 233 XAIFLASAE-SDYIVSQTYNVD 253

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 26/247 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+G+  +VTGG  GIGR +A  +A  GA VA     + +       L+ L   K      
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKV----- 62
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + +  D+     C  +    V  +G ID++  NA V +    +  +  E+L  +F  N+
Sbjct: 63  -IGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV-FPDAPLATMTPEQLNGIFAVNV 120
Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
              F+  +  L  +     G  ++ ++   P+   P                R  A++L 
Sbjct: 121 NGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELA 180
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
              I VN + PG I T  +  +  EE  A     +P    G P ++     FLA    + 
Sbjct: 181 PHKITVNAIMPGNIMTEGLLEN-GEEYIASMARSIPAGALGTPEDIGHLAAFLATKE-AG 238
Query: 263 YITGQVL 269
           YITGQ +
Sbjct: 239 YITGQAI 245

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L GK ALVTG   GIG+A+A   A +GATV  + + ++  K A  ++          
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---------- 50
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAA-VQYKAGSVEEIDEERLERVF 155
            K   AI+AD+    + K +  E+    G IDILVNNA+ V + A   +++D +   ++ 
Sbjct: 51  GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVA--WDDVDLDHWRKII 108
Query: 156 RTNIFSHFFMTRHSL---RHMNEGSAIINTTSVEPLWHSPE--------------ARGLA 198
             N+   F +TR      R   +   +I+  S      +P                R LA
Sbjct: 109 DVNLTGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALA 168
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            +L +  I  N V PG I +  + +S   E           K  GQP  +A    FLA +
Sbjct: 169 TELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLASD 228
Query: 259 HCSSYITGQVLH 270
               +ITGQ L+
Sbjct: 229 DA-RWITGQTLN 239

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 43/263 (16%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  KV +++G    +G  +A   A +GA +              E LE + +  T   + 
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLA-------ARTVERLEDVAKQVTDTGRR 61
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE---ERLERVFR 156
            +++  D+  D     +VDE + AYG++D+++NNA   ++  S++       E +     
Sbjct: 62  ALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNA---FRVPSMKPFANTTFEHMRDAIE 118
Query: 157 TNIFSHFFMTRHSLRHMNEG-SAIINTTSVEPLWHSPEARG---------------LALQ 200
             +F    + +     + E   A++N  S+  + HS    G               LA +
Sbjct: 119 LTVFGALRLIQGFTPALEESKGAVVNVNSM-VVRHSQAKYGAYKMAKSALLAMSQTLATE 177
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-----------PMKRAGQPIEVA 249
           L E+GIRVN V PG IW   + S F E ++ ++G+ V            +KR     EVA
Sbjct: 178 LGEKGIRVNSVLPGYIWGGTLKSYF-EHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVA 236
Query: 250 PCYVFLACNHCSSYITGQVLHPN 272
              +F+A +  S  ITGQ L  N
Sbjct: 237 SAILFMASDLASG-ITGQALDVN 258

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 26/241 (10%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           V +VTG   GIG+A+A      G  V   Y +S   K A+E       +K  +A    AI
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARS--AKAAEEV------SKQIEAYGGQAI 54
Query: 104 S--ADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-------QYKAGSVEEIDEERLERV 154
           +   D+  + + + ++   ++A+G ID++VNNA +       + K    +E+ +  L  V
Sbjct: 55  TFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGV 114
Query: 155 FR-TNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGL-------ALQLVERGI 206
           F  T   +   M +   R +N  S +    ++    ++    G+       A +   R I
Sbjct: 115 FLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNI 174
Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN V PG I + +  +   E+   +    +P+ R GQP  VA    FLA +  +SYITG
Sbjct: 175 NVNVVCPGFIASDM-TAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITG 233
Query: 267 Q 267
           Q
Sbjct: 234 Q 234

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 103/246 (41%), Gaps = 42/246 (17%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KV ++TG   GIG  +   Y      V  T                 R  K S   D   
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATS----------------RSIKPSADPDIHT 72
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           ++ D+   E   R+V E +  +G+ID LVNNA V + A    E  +E  +     N+   
Sbjct: 73  VAGDISKPETADRIVREGIERFGRIDSLVNNAGV-FLAKPFVEXTQEDYDHNLGVNVAGF 131
Query: 163 FFMT-RHSLRHMNEGSAIIN--TTSV--EPLWHSPEA-------------RGLALQLVER 204
           F +T R +   + +GS  I   TTS+  +P    P A             R LA +    
Sbjct: 132 FHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRS 191
Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI 264
           G+RVN V+PG I TP  P+    E  +      P+ R G+  +V    ++L     + +I
Sbjct: 192 GVRVNAVSPGVIKTPXHPA----ETHSTLAGLHPVGRXGEIRDVVDAVLYL---EHAGFI 244
Query: 265 TGQVLH 270
           TG++LH
Sbjct: 245 TGEILH 250

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 41/242 (16%)
Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LVTGG+ GIG A+A   A +G  VA T+  S   K       +  +   SDA D      
Sbjct: 39  LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LFGVEVDVTDSDAVD------ 89
Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
                    R    V    G +++LV+NA +   A  +  + EE+ E+V   N+   F +
Sbjct: 90  ---------RAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFRV 139
Query: 166 TRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVN 209
            + + R M  N+   +I   SV  LW                  AR +A +L +  +  N
Sbjct: 140 AQRASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTAN 199
Query: 210 GVAPGPIWTPLIPSSFSEEESAQFGSE--VPMKRAGQPIEVAPCYVFLACNHCSSYITGQ 267
            VAPG I T +   + + +E  Q G+   +P KR G P EVA    FLA     SYI+G 
Sbjct: 200 VVAPGYIDTDM---TRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDA-SYISGA 255
Query: 268 VL 269
           V+
Sbjct: 256 VI 257

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 41/242 (16%)
Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LVTGG+ GIG A+A   A +G  VA T+  S   K       +  +   SDA D      
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LFGVEVDVTDSDAVD------ 69
Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
                    R    V    G +++LV+NA +   A  +  + EE+ E+V   N+   F +
Sbjct: 70  ---------RAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFRV 119
Query: 166 TRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVN 209
            + + R M  N+   +I   SV  LW                  AR +A +L +  +  N
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTAN 179
Query: 210 GVAPGPIWTPLIPSSFSEEESAQFGSE--VPMKRAGQPIEVAPCYVFLACNHCSSYITGQ 267
            VAPG I T +   + + +E  Q G+   +P KR G P EVA    FLA     SYI+G 
Sbjct: 180 VVAPGYIDTDM---TRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDA-SYISGA 235
Query: 268 VL 269
           V+
Sbjct: 236 VI 237

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG   GIG  +A  +A +GA V    V+S  E  A+   ++   A   D   
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLD--- 288
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              ++AD   D+  + + D   +  GK DILVNNA +      +  +D+ R + V   N+
Sbjct: 289 ---VTADDAVDKISEHLRD---HHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL 341
Query: 160 FSHFFMTRHSLRH--MNEGSAIINTTSVEPL--------WHSPEA------RGLALQLVE 203
            +   +T   + +  + EG  +I  +S+  +        + + +A      + LA  L  
Sbjct: 342 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAA 401
Query: 204 RGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           +GI +N VAPG I T +   IP + + E   +  S   + + GQP++VA    + A +  
Sbjct: 402 KGITINAVAPGFIETQMTAAIPLA-TREVGRRLNS---LLQGGQPVDVAEAIAYFA-SPA 456
Query: 261 SSYITGQVLH 270
           S+ +TG V+ 
Sbjct: 457 SNAVTGNVIR 466

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG   GIG  +A  +A +GA V    V+S  E  A+   ++   A   D   
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLD--- 267
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              ++AD   D+  + + D   +  GK DILVNNA +      +  +D+ R + V   N+
Sbjct: 268 ---VTADDAVDKISEHLRD---HHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL 320
Query: 160 FSHFFMTRHSLRH--MNEGSAIINTTSVEPL--------WHSPEA------RGLALQLVE 203
            +   +T   + +  + EG  +I  +S+  +        + + +A      + LA  L  
Sbjct: 321 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAA 380
Query: 204 RGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           +GI +N VAPG I T +   IP + + E   +  S   + + GQP++VA    + A +  
Sbjct: 381 KGITINAVAPGFIETQMTAAIPLA-TREVGRRLNS---LLQGGQPVDVAEAIAYFA-SPA 435
Query: 261 SSYITGQVLH 270
           S+ +TG V+ 
Sbjct: 436 SNAVTGNVIR 445

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 108/263 (41%), Gaps = 43/263 (16%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S K  GKV LVTG    IG A A   A EG  +A         ++A E  E     K  +
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALL----DMNREALEKAEASVREKGVE 57
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
           A+  +    D+  +E     VD VV  +GKID L NNA  Q     V++   +   RV  
Sbjct: 58  ARSYVC---DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114
Query: 157 TNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE------ARG--------LAL 199
            N+   F + +   R M   N G  I+NT S+  +   P       ++G         AL
Sbjct: 115 INVTGAFHVLKAVSRQMITQNYGR-IVNTASMAGVKGPPNMAAYGTSKGAIIALTETAAL 173
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE----------------VPMKRAG 243
            L    IRVN ++PG +  P        E  A+ GS+                VPM+R G
Sbjct: 174 DLAPYNIRVNAISPGYMG-PGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYG 232
Query: 244 QPIEVAPCYVFLACNHCSSYITG 266
              E+     FL  +  SS++TG
Sbjct: 233 DINEIPGVVAFLLGDD-SSFMTG 254

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ K  LVTGG  GIG A+   +A  GA +   +  ++ E +  E L   ++        
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVI---HTCARNEYELNECLSKWQK----KGFQ 64
Query: 100 PMAISADLGFDENCKRVVDEVVNAYG-KIDILVNNAA-------VQYKAGSVEEIDEERL 151
                 D       ++++  V + +G K+DIL+NN         + Y A          L
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 124
Query: 152 ERVFRTNIFSHFFMTRHSLRHMNEGSAI--INTTSVEPLWHSPE------ARGLALQLVE 203
           E  +  +  +H  +      ++   S+I  + + SV  ++ + +      AR LA +   
Sbjct: 125 ESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWAS 184
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
            GIR N VAP  I TPL  + + +E      S  P+ R G+P EV+    FL C   +SY
Sbjct: 185 DGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFL-CMPAASY 243
Query: 264 ITGQVL 269
           ITGQ +
Sbjct: 244 ITGQTI 249

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA---QETLEILREAKTSD 96
           L+GKVA VTG   GIG AVA  YA  GA VA  Y     ++ A   Q+T  +  +A   +
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE-ERLERVF 155
             DP ++          +  + +    +G ID+ V NA V +  G   ++D  +   ++ 
Sbjct: 92  ISDPKSV----------EETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKII 141
Query: 156 RTNIFSHFFMTRH---SLRHMNEGSAIINTTSVEPLWHSPE---------------ARGL 197
             ++   ++ + +     +   +GS II ++    + + P+               A+ L
Sbjct: 142 SVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSL 201
Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           A++      RVN ++PG I T  I    S++  A++    P+ R G   E+   Y++LA 
Sbjct: 202 AIEWAPFA-RVNTISPGYIDTD-ITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLAS 259
Query: 258 NHCSSYITG 266
           N  S++ TG
Sbjct: 260 N-ASTFTTG 267

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG   GIG  +A  +A +GA V    V+S  E  A+   ++   A   D   
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLD--- 275
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              ++AD   D+  + + D   +  GK DILVNNA +      +  +D+ R + V   N+
Sbjct: 276 ---VTADDAVDKISEHLRD---HHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL 328
Query: 160 FSHFFMTRHSLRH--MNEGSAIINTTSVEPL--------WHSPEA------RGLALQLVE 203
            +   +T   + +  + EG  +I  +S+  +        + + +A      + LA  L  
Sbjct: 329 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAA 388
Query: 204 RGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           +GI +N VAPG I T +   IP + + E   +  S   + + GQP++VA    + A +  
Sbjct: 389 KGITINAVAPGFIETQMTAAIPLA-TREVGRRLNS---LLQGGQPVDVAEAIAYFA-SPA 443
Query: 261 SSYITGQVLH 270
           S+ +TG V+ 
Sbjct: 444 SNAVTGNVIR 453

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG   GIG  +A  +A +GA V    V+S  E  A+   ++   A   D   
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLD--- 251
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              ++AD   D+  + + D   +  GK DILVNNA +      +  +D+ R + V   N+
Sbjct: 252 ---VTADDAVDKISEHLRD---HHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL 304
Query: 160 FSHFFMTRHSLRH--MNEGSAIINTTSVEPL--------WHSPEA------RGLALQLVE 203
            +   +T   + +  + EG  +I  +S+  +        + + +A      + LA  L  
Sbjct: 305 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAA 364
Query: 204 RGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           +GI +N VAPG I T +   IP + + E   +  S   + + GQP++VA    + A +  
Sbjct: 365 KGITINAVAPGFIETQMTAAIPLA-TREVGRRLNS---LLQGGQPVDVAEAIAYFA-SPA 419
Query: 261 SSYITGQVLH 270
           S+ +TG V+ 
Sbjct: 420 SNAVTGNVIR 429

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG   GIG  +A  +A +GA V    V+S  E  A+   ++   A   D   
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLD--- 259
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              ++AD   D+  + + D   +  GK DILVNNA +      +  +D+ R + V   N+
Sbjct: 260 ---VTADDAVDKISEHLRD---HHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNL 312
Query: 160 FSHFFMTRHSLRH--MNEGSAIINTTSVEPL--------WHSPEA------RGLALQLVE 203
            +   +T   + +  + EG  +I  +S+  +        + + +A      + LA  L  
Sbjct: 313 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAA 372
Query: 204 RGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           +GI +N VAPG I T +   IP + + E   +  S   + + GQP++VA    + A +  
Sbjct: 373 KGITINAVAPGFIETQMTAAIPLA-TREVGRRLNS---LLQGGQPVDVAEAIAYFA-SPA 427
Query: 261 SSYITGQVLH 270
           S+ +TG V+ 
Sbjct: 428 SNAVTGNVIR 437

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 39/260 (15%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL+G+  L+TGG SG+GRA+   +  EGA VA             ++ E L E +T    
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVL----------DKSAERLAELETDHGD 51
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL----ERV 154
           + + I  D+   E+ K+     V  +GKID L+ NA +   + ++ ++ EE L    + V
Sbjct: 52  NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEV 111
Query: 155 FRTNIFSHFFMTRHSLRHM--NEGSAIINTTSV-------EPLWHSPE------ARGLAL 199
           F  N+  +    +  L  +  + G+ I   ++         PL+ + +       R LA 
Sbjct: 112 FHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAF 171
Query: 200 QLVERGIRVNGVAPGPIWTPLI-PSSFSEEESA--------QFGSEVPMKRAGQPIEVAP 250
           +L    +RVNGV  G I + L  PSS      A           S +P+ R  +  E   
Sbjct: 172 ELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTG 230
Query: 251 CYVFLACNHCSSYITGQVLH 270
            YVF A    ++  TG +L+
Sbjct: 231 AYVFFATRGDAAPATGALLN 250

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           G+  LVTGG SGIG A+A  +A  GA V    + + +   A     I RE          
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDA-DGVHAPRHPRIRRE---------- 59
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
               D+   +  +R+ +    A  ++D+LVNNA +       EE D    ERV R N+ +
Sbjct: 60  --ELDITDSQRLQRLFE----ALPRLDVLVNNAGISRDR---EEYDLATFERVLRLNLSA 110
Query: 162 HFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
               ++ +   + + G +I+N  S+   + S +               R LA +     I
Sbjct: 111 AMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERI 170
Query: 207 RVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           RVN +APG I TPL     ++ E + +     P+ R G+  EVA    FL C   +S++T
Sbjct: 171 RVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFL-CGPGASFVT 229
Query: 266 GQVL 269
           G VL
Sbjct: 230 GAVL 233

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 104/255 (40%), Gaps = 39/255 (15%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+ A+VTGG  GIG A+A      GATVA   +     +     LE            
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----------NG 59
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A+  D+    +    + + ++A G  D+L  NA V     +V+  DEE  +  F  N 
Sbjct: 60  GFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEE-WDFNFDVNA 118
Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSP--------------EARGLALQLV 202
              F   + + RH    N    I+NT S+     +P                + LA ++ 
Sbjct: 119 RGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA 178
Query: 203 ERGIRVNGVAPG----------PIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
            + IRVN V PG           IW   +     E   A++ S  P+ R  +P +VA   
Sbjct: 179 PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV 238
Query: 253 VFLACNHCSSYITGQ 267
           VFLA +  + ++TGQ
Sbjct: 239 VFLASD-AARFMTGQ 252

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 36/254 (14%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTG   GIG+A+A     +G  VA   +    +  A+     + +A        +A
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVA---IADYNDATAKAVASEINQA----GGHAVA 55
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           +  D+   +     V++     G  D++VNNA V   +  +E I  E +++V+  N+   
Sbjct: 56  VKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGV 114
Query: 163 FFMTR---HSLRHMNEGSAIINTTSVEPLWHSPE----------ARGL----ALQLVERG 205
            +  +    + +    G  IIN  S      +PE           RGL    A  L   G
Sbjct: 115 IWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLG 174
Query: 206 IRVNGVAPGPIWTPL---IPSSFSEEE-------SAQFGSEVPMKRAGQPIEVAPCYVFL 255
           I VNG  PG + TP+   I    SE         +A+F   + + R  +P +VA C  +L
Sbjct: 175 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234
Query: 256 ACNHCSSYITGQVL 269
           A    S Y+TGQ L
Sbjct: 235 ASPD-SDYMTGQSL 247

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 121/267 (45%), Gaps = 32/267 (11%)
Query: 25  PTPQFTSHDYKPSN-KLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKD 81
           P  Q T H+       L+GKV +VTG  G  G+G   A   A  GA VA TY  +   + 
Sbjct: 2   PGQQATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITY--ASRAQG 59
Query: 82  AQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG 141
           A+E ++ L +     AK   A    +   E+C+++V +VV  +G+ID  + NA     +G
Sbjct: 60  AEENVKELEKTYGIKAK---AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG 116
Query: 142 SVEEIDEERLERVFRTNIFSHFFMTR---HSLRHMNEGSAIINTTSVEPLWHSPE----- 193
            + +   E    V + ++   F   +   H  +    GS +I  +    + + P+     
Sbjct: 117 -ILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSY 175
Query: 194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ-FGSEVPMKRA 242
                     AR LA +  +   RVN ++PG I T L  S F  +E+ Q + S +PM R 
Sbjct: 176 NVAKAGCIHMARSLANEWRDFA-RVNSISPGYIDTGL--SDFVPKETQQLWHSMIPMGRD 232
Query: 243 GQPIEVAPCYVFLACNHCSSYITGQVL 269
           G   E+   YV+ A +  S+Y TG  L
Sbjct: 233 GLAKELKGAYVYFASD-ASTYTTGADL 258

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 10/137 (7%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+GK ALVTG  +GIG+A+A     EGA V    +  + E++  ET++ +R        
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANV---LINGRREENVNETIKEIRAQYPDAIL 63
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
            P+   ADLG ++ C+ V+++    Y K+DIL+NN  + ++     +I +E   ++F  N
Sbjct: 64  QPVV--ADLGTEQGCQDVIEK----YPKVDILINNLGI-FEPVEYFDIPDEDWFKLFEVN 116
Query: 159 IFSHFFMTRHSLRHMNE 175
           I S   +TR  L+   E
Sbjct: 117 IXSGVRLTRSYLKKXIE 133

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 105/251 (41%), Gaps = 35/251 (13%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           N L GK  ++TGG  G+G   A      GA V    V  +E       L         DA
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------GDA 52
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                +  D+  +E+ +RVV      +G +D LVNNA +      +E    ER  +V   
Sbjct: 53  ARYQHL--DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM-FLETESVERFRKVVEI 109
Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL-------------WHSPEARGLA-LQL 201
           N+   F   +  +  M +  G +I+N +S   L             W     RGL+ L  
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG---VRGLSKLAA 166
Query: 202 VERG---IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           VE G   IRVN V PG  +TP+   +   +    +    PM R G+P E+A   V L  +
Sbjct: 167 VELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNY-PNTPMGRVGEPGEIAGAVVKL-LS 224
Query: 259 HCSSYITGQVL 269
             SSY+TG  L
Sbjct: 225 DTSSYVTGAEL 235

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 46/249 (18%)
Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LVTGG  GIG+AV                     ++   T+  +   ++  A++   I A
Sbjct: 8   LVTGGSKGIGKAVVELLL----------------QNKNHTVINIDIQQSFSAENLKFIKA 51
Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
           DL   ++   V+D + N     D +  NA +  K GS+ +ID E +++V   N++S  + 
Sbjct: 52  DLTKQQDITNVLDIIKNV--SFDGIFLNAGILIK-GSIFDIDIESIKKVLDLNVWSSIYF 108
Query: 166 TRHSLRHMNEGSAIINTTSVEPLWHSPEA--------------RGLALQLVERGIRVNGV 211
            +    ++  G++I+   S +     P +              + LAL L +  IRVN V
Sbjct: 109 IKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTV 168
Query: 212 APGPIWTPL-----------IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
            PG + T L           +  SF E +  Q   E P+ R  QP E+A   +FL  +  
Sbjct: 169 CPGTVDTDLYRNLIQKYANNVGISFDEAQK-QEEKEFPLNRIAQPQEIAELVIFLLSDK- 226
Query: 261 SSYITGQVL 269
           S + TG ++
Sbjct: 227 SKFXTGGLI 235

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 106/242 (43%), Gaps = 41/242 (16%)
Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISA 105
           LVTGG+ GIG A+A   A +G  VA T+  S   K       +  +   SDA D      
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LFGVECDVTDSDAVD------ 69
Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
                    R    V    G +++LV+NA +   A  +  + EE+ E+V   N+   F +
Sbjct: 70  ---------RAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFRV 119
Query: 166 TRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVN 209
            + + R M  N+   +I   SV   W                  AR +A +L +  +  N
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTAN 179
Query: 210 GVAPGPIWTPLIPSSFSEEESAQFGSE--VPMKRAGQPIEVAPCYVFLACNHCSSYITGQ 267
            VAPG I T +   + + +E  Q G+   +P KR G P EVA    FLA    +SYI+G 
Sbjct: 180 VVAPGYIDTDM---TRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASED-ASYISGA 235
Query: 268 VL 269
           V+
Sbjct: 236 VI 237

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 28/250 (11%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L  KVA++TG   GIG   +   A  GA V           D  ET   L  A  S 
Sbjct: 6   TAELENKVAIITGACGGIGLETSRVLARAGARVVL--------ADLPET--DLAGAAASV 55
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGS-VEEIDEERLERVF 155
            +  +    DL  + + + ++D  ++ +G++DI+ NNAA    A   V ++  +  +  F
Sbjct: 56  GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTF 115
Query: 156 RTNIFSHFFMTRHSLRHMNE--GSAIINTTS--------VEPLWHSPEA------RGLAL 199
             N      M ++++  +    G AI+N +S        +   +   +A      R +A 
Sbjct: 116 TVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVAT 175
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           Q    G+R N +APG + TP +     +     F +     R G+P E+A    FLA + 
Sbjct: 176 QYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR 235
Query: 260 CSSYITGQVL 269
            +++ITGQV+
Sbjct: 236 -AAFITGQVI 244

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 31/252 (12%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           N+LR  +ALVTG  SGIGRAV+   A EGATVA   +   +   AQET+ +L    + + 
Sbjct: 3   NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDL---DRAAAQETVRLLGGPGSKEG 59
Query: 98  ---KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
               +  A  AD+      + ++++V   + +   +V + A   +   +  + E+  ++V
Sbjct: 60  PPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKV 119
Query: 155 FRTNIFSHFFMTRHSLRHMNEG---SAIINTTSV--------EPLWHSPEARGLAL---- 199
              N+   F +T+ + + +       +IIN +S+        +  + + +A  + L    
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTA 179
Query: 200 --QLVERGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF 254
             +L   GIR N V PG I TP+   +P    ++ +      +PM   G P +VA    F
Sbjct: 180 ARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEM----IPMGHLGDPEDVADVVAF 235
Query: 255 LACNHCSSYITG 266
           LA    S YITG
Sbjct: 236 LASED-SGYITG 246

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 31  SHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR 90
           SH Y    +L  +VA+VTGG   IG A     A  GA V    +   +E  A + +E LR
Sbjct: 2   SHMYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARV---IIADLDEAMATKAVEDLR 58
Query: 91  EAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
                +  D  ++  D+   E+ +  V  V    G++DILV  A +       E++ + +
Sbjct: 59  ----MEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQ 114
Query: 151 LERVFRTNIFSHFFMTRHSLRHMNE---------GSA---IINTTSVEPLWHSPEA---- 194
             +    N+   F   +   R M E         GS    I+N    +  +++ +A    
Sbjct: 115 WLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQ 174
Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV---PMKRAGQPIEVA 249
             R LA +    GIR N VAP  I T L  + F  E+   + + +   PM R GQP EVA
Sbjct: 175 YIRSLAAEWAPHGIRANAVAPTYIETTL--TRFGMEKPELYDAWIAGTPMGRVGQPDEVA 232
Query: 250 PCYVFLACNHCSSYITGQVLHPN 272
               FLA +  +S +TG +++ +
Sbjct: 233 SVVQFLASD-AASLMTGAIVNVD 254

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 108/256 (42%), Gaps = 31/256 (12%)
Query: 33  DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           DY+   +L G  A VTG  SGIG  +   +A  GA +             +E   + R A
Sbjct: 2   DYRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILI---------DREAAALDRAA 52
Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
           +   A     I AD+  D            A   + ILVN+A +  +     E D+    
Sbjct: 53  QELGAAVAARIVADV-TDAEAMTAAAAEAEAVAPVSILVNSAGIA-RLHDALETDDATWR 110
Query: 153 RVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVE-PLWHSPE---------------A 194
           +V   N+   F+ +R   R M      AI+N  S+   + + P+                
Sbjct: 111 QVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLT 170
Query: 195 RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYV 253
           R LA +   RG+RVN +APG + T +        E  +   ++ PM R G+P E+A   +
Sbjct: 171 RALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAAL 230
Query: 254 FLACNHCSSYITGQVL 269
           FLA +  +SY+TG +L
Sbjct: 231 FLA-SPAASYVTGAIL 245

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 32/186 (17%)
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           I  D+  +++ K +V E +  +G++D +VNNA         EE   +   ++   N+   
Sbjct: 59  ILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGT 118
Query: 163 FFMTRHSLRHMNEGSA-IINTTSVEPLWHSPEA--------------RGLALQLVERGIR 207
           + +T+ +L ++ +    +IN +S+       +A              + LAL     G+R
Sbjct: 119 YTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVR 178
Query: 208 VNGVAPGPIWTP-------LIP---SSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA- 256
           VN ++PG IWTP       L+P   +S  E   AQ     P+ R GQP EV    VFLA 
Sbjct: 179 VNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ-----PLGRMGQPAEVGAAAVFLAS 233
Query: 257 -CNHCS 261
             N C+
Sbjct: 234 EANFCT 239

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 32/254 (12%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GK+ALVTG   GIG A+A  YA  GAT+ F  +        QE ++    A  +   +
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDIN-------QELVDRGMAAYKAAGIN 84
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                 D+  ++  + +V ++ +  G IDILVNNA +  +   + E+   +  +V   ++
Sbjct: 85  AHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMI-EMTAAQFRQVIDIDL 143
Query: 160 FSHFFMTRHSLRHMNEG--SAIINTTSV------EPLWHSPEARG--------LALQLVE 203
            + F +++  +  M +     IIN  S+      E +     A+G        +A +  E
Sbjct: 144 NAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGE 203
Query: 204 RGIRVNGVAPGPIWTPL------IPSSFSEEESAQF-GSEVPMKRAGQPIEVAPCYVFLA 256
             I+ NG+ PG I TP       +    S     QF  ++ P  R G+  ++    VFLA
Sbjct: 204 ANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLA 263
Query: 257 CNHCSSYITGQVLH 270
            +  S+++ G +L+
Sbjct: 264 SD-ASNFVNGHILY 276

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ KV ++ GG   +G   A  +ALE   +   Y    + KD+    ++  E +   AK 
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHY---HQAKDSDTANKLKDELEDQGAKV 65
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   +DL  +E   ++ D     +GK+DI +N      K   VE  + E        N 
Sbjct: 66  AL-YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNK 124
Query: 160 FSHFFMTRHSLRHMN-EGSAIINTTSVEPLW---HSPEA----------RGLALQLVERG 205
            ++FF+ + + +HMN  G  I   TS+   +   +S  A          R  + +L+++ 
Sbjct: 125 VAYFFI-KQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQ 183
Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           I VN +APGP+ T       ++E +A   S+    +  +  ++AP   FL  +    +I 
Sbjct: 184 ISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGW--WIN 241
Query: 266 GQVLHPN 272
           GQ +  N
Sbjct: 242 GQTIFAN 248

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 34  YKPS-NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           Y+P  + L+ ++ LVTG   GIGR  A  YA  GATV    +   EEK  +    I  E 
Sbjct: 5   YQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVIL--LGRNEEKLRRVAQHIADEQ 62
Query: 93  KTSDAKDPMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
                  P   + DL     E C++V D +   Y ++D +++NA +  + G + E D + 
Sbjct: 63  HVQ----PQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQI 118
Query: 151 LERVFRTNIFSHFFMTR---HSLRHMNEGSAIINTTSV----EPLWHSPEARGLA----L 199
            + V + N+ + F +T+     L   + GS +  ++SV       W +      A    +
Sbjct: 119 WQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMM 178
Query: 200 QLV-----ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF 254
           Q++      R +RVN + PG   T +  S+F  E+  +  +         P ++ P Y++
Sbjct: 179 QVLADEYQNRSLRVNCINPGGTRTSMRASAFPTEDPQKLKT---------PADIMPLYLW 229
Query: 255 L 255
           L
Sbjct: 230 L 230

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 121/280 (43%), Gaps = 51/280 (18%)
Query: 24  EPTPQFTSHDYKPSNK-------LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS 76
           +P P     D  P+ +       LR KVA +TGG SGIG  +A  +   G     T + S
Sbjct: 2   QPPPDVEGDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHG---CHTVIAS 58
Query: 77  QEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV 136
              +     L   R+   +  +  + +S D+         VD+ +  +G+IDIL+N AA 
Sbjct: 59  ---RSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAG 115
Query: 137 QY--KAG--------SVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV- 185
            +   AG        +V +ID      V R  ++  FF         + G  I+N T+  
Sbjct: 116 NFLCPAGALSFNAFKTVMDIDTSGTFNVSRV-LYEKFF--------RDHGGVIVNITATL 166
Query: 186 ----EPLW-HSPEA--------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ 232
               + L  H+  A        R LA++   + IRVN +APGPI            + A 
Sbjct: 167 GNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQ-AS 225
Query: 233 FGSEV---PMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
             ++V   P++R G   E+A   ++LA +  +SY+TG VL
Sbjct: 226 LSTKVTASPLQRLGNKTEIAHSVLYLA-SPLASYVTGAVL 264

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 45/261 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A+VTG    IGRA+A      G  V   Y  S     A+  + +  E     +   +   
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS-----AEAAVSLADELNKERSNTAVVCQ 60
Query: 105 ADLG----FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE---------EIDEERL 151
           ADL        +C+ +++    A+G+ D+LVNNA+  Y    V+         +  E ++
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 152 ERVFRTNIFSHFFMT---------------RHSLRHMNEGSAIINTTSVEPLWHSPEARG 196
             +  TN  + F +T                 +L  +N   A+++   +    ++     
Sbjct: 121 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 180
Query: 197 L-------ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
           L       AL+L   GIRVNGVAPG     L+P +  EEE  ++  +VP+ +R     ++
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAPG---VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 237
Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   +FL     + YITG ++
Sbjct: 238 ADAVIFLVSGS-AQYITGSII 257

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 45/261 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A+VTG    IGRA+A      G  V   Y  S     A+  + +  E     +   +   
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS-----AEAAVSLADELNKERSNTAVVCQ 80
Query: 105 ADLG----FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE---------EIDEERL 151
           ADL        +C+ +++    A+G+ D+LVNNA+  Y    V+         +  E ++
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 152 ERVFRTNIFSHFFMT---------------RHSLRHMNEGSAIINTTSVEPLWHSPEARG 196
             +  TN  + F +T                 +L  +N   A+++   +    ++     
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 200
Query: 197 L-------ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
           L       AL+L   GIRVNGVAPG     L+P +  EEE  ++  +VP+ +R     ++
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAPG---VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 257
Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   +FL     + YITG ++
Sbjct: 258 ADAVIFLVSGS-AQYITGSII 277

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 45/261 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A+VTG    IGRA+A      G  V   Y  S     A+  + +  E     +   +   
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS-----AEAAVSLADELNKERSNTAVVCQ 80
Query: 105 ADLG----FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE---------EIDEERL 151
           ADL        +C+ +++    A+G+ D+LVNNA+  Y    V+         +  E ++
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 152 ERVFRTNIFSHFFMT---------------RHSLRHMNEGSAIINTTSVEPLWHSPEARG 196
             +  TN  + F +T                 +L  +N   A+++   +    ++     
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 200
Query: 197 L-------ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
           L       AL+L   GIRVNGVAPG     L+P +  EEE  ++  +VP+ +R     ++
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAPG---VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 257
Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   +FL     + YITG ++
Sbjct: 258 ADAVIFLVSGS-AQYITGSII 277

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 45/261 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A+VTG    IGRA+A      G  V   Y  S     A+  + +  E     +   +   
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS-----AEAAVSLADELNKERSNTAVVXQ 60
Query: 105 ADLG----FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE---------EIDEERL 151
           ADL        +C+ +++    A+G+ D+LVNNA+  Y    V+         +  E ++
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 152 ERVFRTNIFSHFFMT---------------RHSLRHMNEGSAIINTTSVEPLWHSPEARG 196
             +  TN  + F +T                 +L  +N   A+++   +    ++     
Sbjct: 121 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 180
Query: 197 L-------ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
           L       AL+L   GIRVNGVAPG     L+P +  EEE  ++  +VP+ +R     ++
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAPG---VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 237
Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   +FL     + YITG ++
Sbjct: 238 ADAVIFLVSGS-AQYITGSII 257

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 45/261 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A+VTG    IGRA+A      G  V   Y  S     A+  + +  E     +   +   
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS-----AEAAVSLADELNKERSNTAVVXQ 60
Query: 105 ADLG----FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE---------EIDEERL 151
           ADL        +C+ +++    A+G+ D+LVNNA+  Y    V+         +  E ++
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 152 ERVFRTNIFSHFFMT---------------RHSLRHMNEGSAIINTTSVEPLWHSPEARG 196
             +  TN  + F +T                 +L  +N   A+++   +    ++     
Sbjct: 121 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 180
Query: 197 L-------ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
           L       AL+L   GIRVNGVAPG     L+P +  EEE  ++  +VP+ +R     ++
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAPG---VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 237
Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   +FL     + YITG ++
Sbjct: 238 ADAVIFLVSGS-AQYITGSII 257

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 45/261 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A+VTG    IGRA+A      G  V   Y  S     A+  + +  E     +   +   
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS-----AEAAVSLADELNKERSNTAVVXQ 80
Query: 105 ADLG----FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE---------EIDEERL 151
           ADL        +C+ +++    A+G+ D+LVNNA+  Y    V+         +  E ++
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 152 ERVFRTNIFSHFFMT---------------RHSLRHMNEGSAIINTTSVEPLWHSPEARG 196
             +  TN  + F +T                 +L  +N   A+++   +    ++     
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 200
Query: 197 L-------ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
           L       AL+L   GIRVNGVAPG     L+P +  EEE  ++  +VP+ +R     ++
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAPG---VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 257
Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   +FL     + YITG ++
Sbjct: 258 ADAVIFLVSGS-AQYITGSII 277

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 45/261 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A+VTG    IGRA+A      G  V   Y  S     A+  + +  E     +   +   
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS-----AEAAVSLADELNKERSNTAVVXQ 80
Query: 105 ADLG----FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE---------EIDEERL 151
           ADL        +C+ +++    A+G+ D+LVNNA+  Y    V+         +  E ++
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 152 ERVFRTNIFSHFFMT---------------RHSLRHMNEGSAIINTTSVEPLWHSPEARG 196
             +  TN  + F +T                 +L  +N   A+++   +    ++     
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 200
Query: 197 L-------ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
           L       AL+L   GIRVNGVAPG     L+P +  EEE  ++  +VP+ +R     ++
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAPG---VSLLPVAMGEEEKDKWRRKVPLGRREASAEQI 257
Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   +FL     + YITG ++
Sbjct: 258 ADAVIFLVSGS-AQYITGSII 277

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 25/250 (10%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTY-VKSQEEKDAQETLEILREAKTSDA 97
           +   +  +V G    IGRA A  +A EGA V  TY   ++    A   +E L        
Sbjct: 5   RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-------G 57
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
           +  +AI ADL      +  +    + +G+I  LV+ A       ++ E+DE    +V   
Sbjct: 58  RSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117
Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVE--------PLWHSPE-------ARGLALQLV 202
           N+ S F   + +L  M +G AI+  +S           L ++          RGLA ++ 
Sbjct: 118 NLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG 177
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            + IRVN V PG I T    +    E   +      +KR G   +VA    FLA +  ++
Sbjct: 178 PK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDD-AA 235
Query: 263 YITGQVLHPN 272
           Y+TG     N
Sbjct: 236 YVTGACYDIN 245

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K A++TG  SGIG A+A   A  GA +      + +E        +  E     +   + 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDE-----IRTVTDEVAGLSSGTVLH 80
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE---ERLERVFRTNI 159
             AD             V + +G  DILVNNA VQ+    VE+I++   E+ +R+   N+
Sbjct: 81  HPADXTKPSEIADXXAXVADRFGGADILVNNAGVQF----VEKIEDFPVEQWDRIIAVNL 136
Query: 160 FSHFFMTRHSL--RHMNEGSAIINTTSVEPLWHSP--------------EARGLALQLVE 203
            S F   R ++          IIN  S   L  SP                + +AL++ E
Sbjct: 137 SSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAE 196
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESA------QFGSEVPMKRAGQPI-------EVAP 250
            G+ VN + PG + TPL+     ++         Q  +EV +K  GQP        +VA 
Sbjct: 197 SGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLK--GQPTKKFITVEQVAS 254
Query: 251 CYVFLACNHCSSYITG 266
             ++LA +  +  ITG
Sbjct: 255 LALYLAGDDAAQ-ITG 269

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKD-AQETLEILREAKT- 94
           N+L+GKVA +TG   G GR  A   A +GA  VA    + Q   D AQ + E L+E    
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 95  --SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
                +  +A  AD+    + + VVDE +  +G IDILV+N  +  + G V  + +++  
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQ-GEVVSLTDQQWS 160
Query: 153 RVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP----------EARGLAL 199
            + +TN+   +   R  L  M E   G ++I  +S   L  +P            +GL L
Sbjct: 161 DILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLML 220
Query: 200 QLV----ERGIRVNGVAPGPIWTPL 220
            L        IRVN V PG + T +
Sbjct: 221 SLANEVGRHNIRVNSVNPGAVNTEM 245

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 35  KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT 94
           + S+  R + A VTG  SGIG AVA   A  G  V   Y  +++ K+    ++ LR A  
Sbjct: 17  RGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAV---YGCARDAKNVSAAVDGLRAA-- 71
Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
               D    S D+   +     V   V  +G I ILVN+A  +   G   ++D+     V
Sbjct: 72  --GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAG-RNGGGETADLDDALWADV 128
Query: 155 FRTNIFSHFFMTRHSLR--HMNEG--SAIINTTSVEP----LWHSPE----------ARG 196
             TN+   F +TR  LR   M E     I+N  S       ++ +P            + 
Sbjct: 129 LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKS 188
Query: 197 LALQLVERGIRVNGVAPGPIWTPL---IPSSFS-------EEESAQFGSEVPMKRAGQPI 246
           +  +L + GI VN V PG + TP+   +   ++       +E   +F +++P+ R   P 
Sbjct: 189 VGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE 248
Query: 247 EVAPCYVFLACNHCSSYITGQVLH 270
           EVA    +L  +  +S IT Q L+
Sbjct: 249 EVAGLVGYLVTDAAAS-ITAQALN 271

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 27/198 (13%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVA-----FTYVKSQEEKDAQETLEILREAKTSDAK 98
           + L+TG   GIGRA+A    LE A  A     F  V     + A +  +I  E +   A 
Sbjct: 4   ILLITGAGKGIGRAIA----LEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL 59
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               I+AD+    + +R+   +V  YG ID LVNNA V  + G++ ++ EE  +    TN
Sbjct: 60  TD-TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTN 117
Query: 159 IFSHFFMTR--HSLRHMNEGSAIINTTSV---EPLWHSP-------EARGLA--LQLVER 204
           +   FF+T+   +L        I   TSV   +   HS          RGL   ++L  R
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR 177
Query: 205 --GIRVNGVAPGPIWTPL 220
              +R+  V PG ++TP+
Sbjct: 178 KCNVRITDVQPGAVYTPM 195

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 105/252 (41%), Gaps = 36/252 (14%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           N L GK  ++TGG  G+G   A      GA V    V  +E       L         DA
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------GDA 52
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                +  D+  +E+ +RVV      +G +D LVNNA +      +E    ER  +V   
Sbjct: 53  ARYQHL--DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM-FLETESVERFRKVVEI 109
Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL-------------WHSPEARGLA-LQL 201
           N+   F   +  +  M +  G +I+N +S   L             W     RGL+ L  
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG---VRGLSKLAA 166
Query: 202 VERG---IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAG-QPIEVAPCYVFLAC 257
           VE G   IRVN V PG  +TP+   +   +    +    PM R G +P E+A   V L  
Sbjct: 167 VELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNY-PNTPMGRVGNEPGEIAGAVVKL-L 224
Query: 258 NHCSSYITGQVL 269
           +  SSY+TG  L
Sbjct: 225 SDTSSYVTGAEL 236

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 37/244 (15%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           ALVTGG  GIGRA+A      G  VA   + S+  ++A ++L  +      +  DP    
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVA---IASRNPEEAAQSLGAVPLPTDLEKDDP---- 57
Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
                    K +V   + A G + +LV+ AAV  +  ++ E+  E   RV   ++   F 
Sbjct: 58  ---------KGLVKRALEALGGLHVLVHAAAVNVRKPAL-ELSYEEWRRVLYLHLDVAFL 107
Query: 165 MTRHSLRHMNEG--SAIINTTSVE----------PLWHSPE------ARGLALQLVERGI 206
           + + +  HM E     ++   SV           P + + +       R LA +    GI
Sbjct: 108 LAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167
Query: 207 RVNGVAPGPIWTPL-IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           RVN + PG + T   +P   + E      + +PM R  +P E+A     L C   + Y+T
Sbjct: 168 RVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVL-CGDEAEYLT 226
Query: 266 GQVL 269
           GQ +
Sbjct: 227 GQAV 230

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 21/247 (8%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S  LRGK   ++GG  GIG A+A   A +GA VA     ++       T+    +     
Sbjct: 4   SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA 63
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               + I  D+   +     V + V  +G IDI VNNA+     GS+EE+  +R + +  
Sbjct: 64  GGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASA-INLGSIEEVPLKRFDLMNG 122
Query: 157 TNIFSHFFMTRHSLRHMN--EGSAIINTT---SVEPLWHSPEARGLA---LQLVERGI-- 206
             +   + +++  + HM   +   I+  +    +EP W  P    +A   + L   GI  
Sbjct: 123 IQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAE 182
Query: 207 --RVNGVAPGPIWTPLIPSSFSEEESAQ--FGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             R  G+A   +W    P +     + Q   G +  M R+ +P EV     ++  N  SS
Sbjct: 183 ELRDAGIASNTLW----PRTTVATAAVQNLLGGDEAMARSRKP-EVYADAAYVVLNKPSS 237
Query: 263 YITGQVL 269
           Y TG  L
Sbjct: 238 Y-TGNTL 243

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 27/244 (11%)
Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           + L+GKVAL+TG  SGIG A A          A             E L  L +  T+  
Sbjct: 3   SALQGKVALITGASSGIGEATARAL-------AAEGAAVAIAARRVEKLRALGDELTAAG 55
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                +  D+   +     V   V A G +DILVNNA +    G VE+ D     R+  T
Sbjct: 56  AKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDT 114
Query: 158 NIFSHFFMTRHSLRH-MNEGSAIINTTSV--------EPLWHSPE------ARGLALQLV 202
           N+    +MTR +L H +     ++  +S+          ++ + +      +  L  ++ 
Sbjct: 115 NLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174
Query: 203 ERGIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           ERG+RV  + PG   T L   I  + ++E   Q  S++  K   Q I  A  Y   A +H
Sbjct: 175 ERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIR-KLQAQDIAEAVRYAVTAPHH 233
Query: 260 CSSY 263
            + +
Sbjct: 234 ATVH 237

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 41/250 (16%)
Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
           P+  L+ KV L+TG  +G+G+  A  +A  GA V        + KDA +T++ ++ A   
Sbjct: 316 PTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV-----NDFKDATKTVDEIKAAGGE 370
Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
              D   ++ D       + ++  V++ YG IDILVNNA +  +  S  ++ ++  + V 
Sbjct: 371 AWPDQHDVAKD------SEAIIKNVIDKYGTIDILVNNAGI-LRDRSFAKMSKQEWDSVQ 423
Query: 156 RTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLW-------HSPEARG-------LAL 199
           + ++   F ++R +  +  E     IIN TS   ++       +S    G       +A+
Sbjct: 424 QVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAI 483
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           +  +  I+VN VAP    T +  S   E++   + ++          +VAP  V+L  + 
Sbjct: 484 EGAKNNIKVNIVAPHAE-TAMTLSIMREQDKNLYHAD----------QVAPLLVYLGTDD 532
Query: 260 CSSYITGQVL 269
               +TG+  
Sbjct: 533 VP--VTGETF 540

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK- 98
           L+GK A+VTG  SGIG A+A   A  GA V        E        +I RE  T ++K 
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPE--------DIERERSTLESKF 53
Query: 99  --DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                 ++ADL   +  +  + +   A G +DILVNNA +Q+ A  +EE   ++   +  
Sbjct: 54  GVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTA-PIEEFPVDKWNAIIA 112
Query: 157 TNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEAR----------GL----ALQ 200
            N+ + F  T  +L  M +     IIN  S   L  S              GL    AL+
Sbjct: 113 LNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALE 172
Query: 201 LVERGIRVNGVAPGPIWTPLI 221
              +GI  N + PG + TPL+
Sbjct: 173 NAGKGITCNAICPGWVRTPLV 193

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 103/257 (40%), Gaps = 48/257 (18%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLE-----ILREAKTSDAK 98
           VA+VTGG SGIG A        GA VAF     +  + A+  L          A   D  
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL 69
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           D + + A   F E C+R +       G   ILVNNA  Q +  +  E  +E      +  
Sbjct: 70  DALQVRA---FAEACERTL-------GCASILVNNAG-QGRVSTFAETTDEAWSEELQLK 118
Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----------------ARGLALQ 200
            FS     R  L  +     +AI+   S+  L   PE                 R +A +
Sbjct: 119 FFSVIHPVRAFLPQLESRADAAIVCVNSL--LASQPEPHMVATSAARAGVKNLVRSMAFE 176
Query: 201 LVERGIRVNGVAPGPI----WTPLIPSSFS-----EEESAQFG--SEVPMKRAGQPIEVA 249
              +G+RVNG+  G +    W     +         + +AQ     ++P+ R G+PIE A
Sbjct: 177 FAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAA 236
Query: 250 PCYVFLACNHCSSYITG 266
              +FLA +  S+Y TG
Sbjct: 237 RAILFLA-SPLSAYTTG 252

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG  +GIG AVA   A EG  V    +       A   +     A   D  D
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD 86
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              I A          +VD  V A+G +D LV NA V + A S+ +   E  +RV   N+
Sbjct: 87  EQQIIA----------MVDACVAAFGGVDKLVANAGVVHLA-SLIDTTVEDFDRVIAINL 135
Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSV--EPLWHSPEARGL------------ALQLVE 203
              +  T+H+   M E  G AI+N +S+  +       A G+            A +L  
Sbjct: 136 RGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRS 195
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESA-QFGSEVPM-----KRAGQPIEVAPCYVFLAC 257
            GIR N + P  + TP+  ++ +  + A   G    M      R   P E+A   VFL  
Sbjct: 196 SGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLS 255
Query: 258 NHCSSYITG 266
           +  +S ITG
Sbjct: 256 DD-ASMITG 263

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 33/240 (13%)
Query: 34  YKPS-NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           Y+P  + L  ++ LVTG   GIGR  A  YA  GATV    +   EEK  Q    I  E 
Sbjct: 3   YQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVIL--LGRNEEKLRQVASHINEET 60
Query: 93  KTSDAKDPMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
                + P     DL     ENC+++   +   Y ++D +++NA +      + E + + 
Sbjct: 61  ----GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQV 116
Query: 151 LERVFRTNIFSHFFMTR---HSLRHMNEGSAIINTTSV----EPLWHSPEARGLA----L 199
            + V + N+ + F +T+     L   + GS +  ++SV       W +  A   A    +
Sbjct: 117 WQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMM 176
Query: 200 QLV----ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           Q++    ++ +RVN + PG   T +  S+F  E+  +  +         P ++ P Y++L
Sbjct: 177 QVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKT---------PADIMPLYLWL 227

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 31  SHDYKPS-NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
           S  Y+P  + L  ++ LVTG   GIGR  A  YA  GATV    +   EEK  Q    I 
Sbjct: 2   SLHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVIL--LGRNEEKLRQVASHIN 59
Query: 90  REAKTSDAKDPMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID 147
            E      + P     DL     E+C+++   +   Y ++D +++NA +      + E D
Sbjct: 60  EET----GRQPQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQD 115
Query: 148 EERLERVFRTNIFSHFFMTR---HSLRHMNEGSAIINTTSV----EPLWHSPEARGLA-- 198
            +  + V + N+ + F +T+     L   + GS +  ++SV       W +  A   A  
Sbjct: 116 PQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATE 175
Query: 199 --LQLV----ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
             +Q++    ++ +RVN + PG   T +  S+F  E+  +  +         P ++ P Y
Sbjct: 176 GMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKT---------PADIMPLY 226
Query: 253 VFL 255
           ++L
Sbjct: 227 LWL 229

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 107/262 (40%), Gaps = 47/262 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A++TGG   IG ++A     +G  V   Y  S  E  AQ  +  L  A+   A   +   
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHS--EGAAQRLVAELNAARAGSA---VLCK 68
Query: 105 ADLGFD----ENCKRVVDEVVNAYGKIDILVNNAAVQY-----------KAGSVEEIDEE 149
            DL       + C+ ++D    A+G+ D+LVNNA+  Y            A   + ID +
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128
Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNEGSA-------IINTTSVEPLWHSPE--------- 193
             E +F +N  +  F+ R   R   EG A       ++N          P          
Sbjct: 129 VAE-LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKH 187
Query: 194 -----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRA-GQPIE 247
                 R  AL+L  R IRVN VAPG     L+P +  +E   ++  +VP+ ++     +
Sbjct: 188 ALGGLTRAAALELAPRHIRVNAVAPG---LSLLPPAMPQETQEEYRRKVPLGQSEASAAQ 244
Query: 248 VAPCYVFLACNHCSSYITGQVL 269
           +A    FL     + YITG  L
Sbjct: 245 IADAIAFLVSKD-AGYITGTTL 265

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 32/233 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  ++ LVTG   GIGR  A  YA  GATV    +   EEK  Q    I  E      + 
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVIL--LGRNEEKLRQVASHINEET----GRQ 61
Query: 100 PMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
           P     DL     ENC+++   +V  Y ++D +++NA +      + E + +  + V + 
Sbjct: 62  PQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQI 121
Query: 158 NIFSHFFMTR---HSLRHMNEGSAIINTTSV----EPLWHSPEARGLA----LQLV---- 202
           N+ + F +T+     L   + GS +  ++SV       W +  A   A    +Q++    
Sbjct: 122 NVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY 181
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           ++ +RVN + PG   T +  S+F  E+  +  +         P ++ P Y++L
Sbjct: 182 QQRLRVNCINPGGTRTAMRASAFPTEDPQKLKT---------PADIMPLYLWL 225

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 107/262 (40%), Gaps = 47/262 (17%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A++TGG   IG ++A     +G  V   Y  S  E  AQ  +  L  A+   A   +   
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHS--EGAAQRLVAELNAARAGSA---VLCK 68
Query: 105 ADLGFD----ENCKRVVDEVVNAYGKIDILVNNAAVQY-----------KAGSVEEIDEE 149
            DL       + C+ ++D    A+G+ D+LVNNA+  Y            A   + ID +
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128
Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNEGSA-------IINTTSVEPLWHSPE--------- 193
             E +F +N  +  F+ R   R   EG A       ++N          P          
Sbjct: 129 VAE-LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKH 187
Query: 194 -----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRA-GQPIE 247
                 R  AL+L  R IRVN VAPG     L+P +  +E   ++  +VP+ ++     +
Sbjct: 188 ALGGLTRAAALELAPRHIRVNAVAPG---LSLLPPAXPQETQEEYRRKVPLGQSEASAAQ 244
Query: 248 VAPCYVFLACNHCSSYITGQVL 269
           +A    FL     + YITG  L
Sbjct: 245 IADAIAFLVSKD-AGYITGTTL 265

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 36/257 (14%)
Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK AL+TG   +  I   +A  +  EGA +AFTY   + EK  +E    + +   SD 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVRE----IAKGFGSD- 73
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERV 154
              + +  D+  DE+ K +   +   +G +DI+V++ A   K    G V +   E  +  
Sbjct: 74  ---LVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIA 130
Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTTS------VEPLWH---------SPEARGLAL 199
              +++S   +TR  L  M   +  I T S      V P ++             R LA 
Sbjct: 131 MDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAY 190
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPI---EVAPCYVFL 255
            + + G R+N ++ GP+ T    S        +  ++V P    G+PI   +V    VFL
Sbjct: 191 DIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---GKPITIEDVGDTAVFL 247
Query: 256 ACNHCSSYITGQVLHPN 272
            C+  +  ITG+V+H +
Sbjct: 248 -CSDWARAITGEVVHVD 263

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 37/256 (14%)
Query: 42  GKVALVTGGDSGIGRAVAHC-YALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP 100
           GKV LVTG   GIG+++    ++L+  TV +   +S+           L++ K       
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP---------LKKLKEKYGDRF 52
Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
             +  D+  D   K++V+  V  +GKID LV NA V     +V EID    ++++  N F
Sbjct: 53  FYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFF 112
Query: 161 SHFFMTRHS---LRHMNEGSAIINTTSVEPLWHSPEARG--------LALQLV--ERGIR 207
           S   +   +   L+  N     +++ +    + S  A G         A+ L   ER ++
Sbjct: 113 SIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEERQVK 172
Query: 208 VNGVAPGPIWTPLI--------PSSFSEEESAQFGSEVPMKRAGQPIEV---APCYVFLA 256
              VAPG + T +         PSS S E+   F     +K   Q ++    A  Y  LA
Sbjct: 173 AIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG---LKENNQLLDSSVPATVYAKLA 229
Query: 257 CNHCSSYITGQVLHPN 272
            +     + GQ L  N
Sbjct: 230 LHGIPDGVNGQYLSYN 245

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 27/244 (11%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           AL+T G  G+G+ V      +G +V  TY     +  A ET+   +E      +    + 
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTY---HSDTTAMETM---KETYKDVEERLQFVQ 63
Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAA-VQYKAGSVEEIDEERLERVFRTNIFSHF 163
           AD+   E+  ++V+E ++ +GKID L+NNA    ++   + + +E+    + + N+ + F
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVF 123
Query: 164 FMTRH---SLRHMNEGSAI---INTTSVEPLWHSPEA------------RGLALQLVERG 205
            + +     +R  N G  I          P W    A            + +A +  E G
Sbjct: 124 HLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYG 183
Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           I  N V PG I   +  ++  E    +     P+ R+G   ++A    FL C   S  IT
Sbjct: 184 ITANMVCPGDIIGEMKEATIQEARQLK-EHNTPIGRSGTGEDIARTISFL-CEDDSDMIT 241
Query: 266 GQVL 269
           G ++
Sbjct: 242 GTII 245

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           VA+VTGG  GIG  +A   A  G  +A T +      DA+    ++ E     A+  + +
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGI-----GDAEGVAPVIAELSGLGAR-VIFL 84
Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-QYKAGSVEEIDEERLERVFRTNIFSH 162
            ADL    + +  VD VV  +G+ID LVNNA +         ++  E  + +   N+   
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144
Query: 163 FFMTRHSLRHMNEGSA-----IINTTSVEPLWHSPE--------------ARGLALQLVE 203
            F T+  L+      A     IIN TSV  +  SPE              ++GLAL+L E
Sbjct: 145 VFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAE 204
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
            GI V  V PG I +    +   + +       VP +R G+P ++      LA      +
Sbjct: 205 TGIAVFEVRPGIIRSDXTAAVSGKYDGLIESGLVPXRRWGEPEDIGNIVAGLAGGQF-GF 263
Query: 264 ITGQVLHPN 272
            TG V+  +
Sbjct: 264 ATGSVIQAD 272

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ-------EEKDAQETLEIL 89
           + KL G+VA +TG   G GRA A   A EGA +    +  +       +     +  E +
Sbjct: 6   AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65
Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
           R  + ++ +   A+     FD   ++VVD+ V A G++DI+V NA V     + ++I  E
Sbjct: 66  RLVEAANRRIVAAVVDTRDFDR-LRKVVDDGVAALGRLDIIVANAGVAAPQ-AWDDITPE 123
Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNEGS---AIINTTSVEPLWHSP-------------- 192
               V   N+   +         + EG    +II  +S   +   P              
Sbjct: 124 DFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTG 183
Query: 193 EARGLALQLVERGIRVNGVAPGPIWTPL 220
            AR  A +L +  IRVN V PGP+ TP+
Sbjct: 184 LARAFAAELGKHSIRVNSVHPGPVNTPM 211

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 51/261 (19%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           SN  + KV ++TGG SG G+  A  +A EGA V  T            T E L EAK   
Sbjct: 1   SNAXKEKVVIITGGSSGXGKGXATRFAKEGARVVIT----------GRTKEKLEEAKLEI 50
Query: 97  AKDP---MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER 153
            + P   + +  D+   ++ ++ ++++   +G+IDIL+NNAA  +     E++       
Sbjct: 51  EQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFIC-PAEDLSVNGWNS 109
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSA---IINTTSVEPLW-------HSPEARG------- 196
           V    +   F+ ++   ++  E      IIN  +    W       HS  A+        
Sbjct: 110 VINIVLNGTFYCSQAIGKYWIEKGIKGNIINXVATYA-WDAGPGVIHSAAAKAGVLAXTK 168
Query: 197 -LALQLVER-GIRVNGVAPGPI---------WTPLIPSSFSEEESAQFGSEVPMKRAGQP 245
            LA++   + GIRVN +APGPI         W        SEE + +    VP+ R G P
Sbjct: 169 TLAVEWGRKYGIRVNAIAPGPIERTGGADKLW-------ISEEXAKRTIQSVPLGRLGTP 221
Query: 246 IEVAPCYVFLACNHCSSYITG 266
            E+A    +L C+  ++YI G
Sbjct: 222 EEIAGLAYYL-CSDEAAYING 241

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 120/283 (42%), Gaps = 70/283 (24%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP--- 100
           VALVTG    +G ++A     EG TV   Y +S  +     TL     A T +A+ P   
Sbjct: 9   VALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADA---STL-----AATLNARRPNSA 60
Query: 101 MAISADL------GFDEN-----------CKRVVDEVVNAYGKIDILVNNAAVQYKA--- 140
           + + ADL       F E            C  +VD     +G+ D+LVNNA+  Y     
Sbjct: 61  ITVQADLSNVATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLL 120
Query: 141 ------GSVEEIDEERLE----RVFRTNIFSHFFMTRHSLRHMNEGSA-----------I 179
                 G     D+E LE     +F +N  + +F+ +   + + +  A           +
Sbjct: 121 RKDAGEGGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNM 180
Query: 180 INTTSVEPLW------HSPEA-----RGLALQLVERGIRVNGVAPGPIWTP-LIPSSFSE 227
           ++  + +PL        + EA     R  AL+L    IRVNGV+PG    P  +P S  E
Sbjct: 181 VDAMTSQPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQE 240
Query: 228 EESAQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
           +    +  +VP+ +R     EV+   +FL C+  + YITG  +
Sbjct: 241 D----YRRKVPLYQRNSSAEEVSDVVIFL-CSPKAKYITGTCI 278

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATV-----------AFTYVKSQEEKDAQET 85
           +  L+G+VA +TG   G GR+ A   A EGA +           + TY  +  E D  ET
Sbjct: 10  AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPE-DLDET 68
Query: 86  LEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE 145
             ++ +      +  +    D+  D   + +V + +  +G++D++V NA V    G V E
Sbjct: 69  ARLVED----QGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGV-LSWGRVWE 123
Query: 146 IDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------- 193
           + +E+ + V   N+   +   R ++  M E   G +I+  +S   L  +P          
Sbjct: 124 LTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKH 183
Query: 194 -----ARGLALQLVERGIRVNGVAPGPIWTPLI 221
                   LA++L E GIRVN + P  + TP+I
Sbjct: 184 GLTALTNTLAIELGEYGIRVNSIHPYSVETPMI 216

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 34  YKPS-NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           Y+P  + L+ ++ LVTG   GIGR  A  YA  GATV    +   EEK  +    I  E 
Sbjct: 6   YQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVIL--LGRNEEKLRRVAQHIADEQ 63
Query: 93  KTSDAKDPMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
                  P   + DL     E C++V D +   Y ++D +++NA +  + G   E D + 
Sbjct: 64  HVQ----PQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQI 119
Query: 151 LERVFRTNI---FSHFFMTRHSLRHMNEGSAIINTTSV----EPLWHS---------PEA 194
            + V + N+   F         L   + GS +  ++SV       W +            
Sbjct: 120 WQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXX 179
Query: 195 RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF 254
           + LA +   R +RVN + PG   T    S+F  E+  +  +         P ++ P Y++
Sbjct: 180 QVLADEYQNRSLRVNCINPGGTRTSXRASAFPTEDPQKLKT---------PADIXPLYLW 230
Query: 255 L 255
           L
Sbjct: 231 L 231

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 54/256 (21%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATV-AFTYVKSQEEKD-AQETLEILREAKTSDAKD 99
           GK   VTG   GIG A A  +   GA V  F    +QE+   A E +++   A+ +    
Sbjct: 7   GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVA---- 62
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                      + C+R++ E      ++D LVN A +  + G+ +++ +E  ++ F  N+
Sbjct: 63  -----------QVCQRLLAETE----RLDALVNAAGI-LRMGATDQLSKEDWQQTFAVNV 106
Query: 160 ---FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------------ARGLALQ 200
              F+ F  T +  R    G AI+   S     H+P                 A  + L+
Sbjct: 107 GGAFNLFQQTMNQFRR-QRGGAIVTVASDAA--HTPRIGMSAYGASKAALKSLALSVGLE 163
Query: 201 LVERGIRVNGVAPGPIWT----PLIPSSFSEEE-----SAQFGSEVPMKRAGQPIEVAPC 251
           L   G+R N V+PG   T     L  S  +EE+       QF   +P+ +  +P E+A  
Sbjct: 164 LAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANT 223
Query: 252 YVFLACNHCSSYITGQ 267
            +FLA +  +S+IT Q
Sbjct: 224 ILFLASD-LASHITLQ 238

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 86/213 (40%), Gaps = 38/213 (17%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT----- 94
           L+GK ALVTG  SGIG  +A   A  GA +    V +     A    EI R         
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANI----VLNGFGDPAPALAEIARHGVKAVHHP 57
Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
           +D  D   I A     E            +G +DILVNNA +Q+ A  VE+   E  +++
Sbjct: 58  ADLSDVAQIEALFALAE----------REFGGVDILVNNAGIQHVA-PVEQFPLESWDKI 106
Query: 155 FRTNIFSHFFMTRHSL---RHMNEGSAIINTTSVEPLWHSPE--------------ARGL 197
              N+ + F  TR +L   R  N G  IIN  SV  L  S                 + +
Sbjct: 107 IALNLSAVFHGTRLALPGMRARNWGR-IINIASVHGLVGSTGKAAYVAAKHGVVGLTKVV 165
Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES 230
            L+     +  N + PG + TPL+     +  +
Sbjct: 166 GLETATSNVTCNAICPGWVLTPLVQKQIDDRAA 198

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 101/248 (40%), Gaps = 32/248 (12%)
Query: 41  RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP 100
           +GK A+V GG  G G A        GA V  T          +E       A  SD  D 
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 66
Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
             I A LG                G ID+L  NA V  +    +++ E   +R F  N  
Sbjct: 67  NEI-AVLGAAAG---------QTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTK 115
Query: 161 SHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
             FF  +     + EG +I+ T+SV      P               A  LA +L+ RGI
Sbjct: 116 GAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGI 175
Query: 207 RVNGVAPGPIWTPLIP-SSFSEEESAQF---GSEV-PMKRAGQPIEVAPCYVFLACNHCS 261
           RVN V+PG I TP    +  +E E A+F   G  + P KR G   EVA   +FLA    +
Sbjct: 176 RVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE--A 233
Query: 262 SYITGQVL 269
           ++ TG  L
Sbjct: 234 TFTTGAKL 241

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 101/248 (40%), Gaps = 32/248 (12%)
Query: 41  RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP 100
           +GK A+V GG  G G A        GA V  T          +E       A  SD  D 
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 65
Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
             I A LG                G ID+L  NA V  +    +++ E   +R F  N  
Sbjct: 66  NEI-AVLGAAAG---------QTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTK 114
Query: 161 SHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
             FF  +     + EG +I+ T+SV      P               A  LA +L+ RGI
Sbjct: 115 GAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGI 174
Query: 207 RVNGVAPGPIWTPLIP-SSFSEEESAQF---GSEV-PMKRAGQPIEVAPCYVFLACNHCS 261
           RVN V+PG I TP    +  +E E A+F   G  + P KR G   EVA   +FLA    +
Sbjct: 175 RVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE--A 232
Query: 262 SYITGQVL 269
           ++ TG  L
Sbjct: 233 TFTTGAKL 240

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KV LVTG  SG GRA+A      G TV  T  ++       E L+ L  A    A+   A
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT-------EALDDLVAAYPDRAE---A 55
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           IS D+   E    V  +V+  YG++D+LVNNA  + + G+ EE  E  L  +F  ++F  
Sbjct: 56  ISLDVTDGERIDVVAADVLARYGRVDVLVNNAG-RTQVGAFEETTERELRDLFELHVFGP 114
Query: 163 FFMTRHSL---RHMNEGSAIINTTSVE--------PLWHSPEA------RGLALQLVERG 205
             +TR  L   R    GS ++N +S            + + +A       GLA ++   G
Sbjct: 115 ARLTRALLPQXRERGSGS-VVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFG 173
Query: 206 IRVNGVAPGPIWTPLI---PSSFSEEESA 231
           I+V  V PG   T L     + FSEE  A
Sbjct: 174 IKVLIVEPGAFRTNLFGKGAAYFSEENPA 202

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 52/258 (20%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE------AK 93
           L G+ ALVTG ++G+G+A+A   A  GA V     ++ +     ETL+I+ +      A 
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-----ETLDIIAKDGGNASAL 61
Query: 94  TSDAKDPMAIS---ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
             D  DP+A      D GF                  DILVNNA +  +A SV E  E  
Sbjct: 62  LIDFADPLAAKDSFTDAGF------------------DILVNNAGIIRRADSV-EFSELD 102
Query: 151 LERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSV--------EPLWHSPE------ 193
            + V   N+ + FF T+   + +        ++N  S+         P + + +      
Sbjct: 103 WDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGL 162
Query: 194 ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCY 252
            + LA +   +GI VN +APG I T    +  ++   +      +P  R G   ++A   
Sbjct: 163 TKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAA 222
Query: 253 VFLACNHCSSYITGQVLH 270
           VFL+ +  + Y+ G +L+
Sbjct: 223 VFLS-SAAADYVHGAILN 239

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 41/265 (15%)
Query: 29  FTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATV-AFTYVKSQEEKDAQETLE 87
           F S   +PS      VAL+TG  SGIGRA A   A +G TV A    +++ E+ A E + 
Sbjct: 20  FQSXXNQPS-----PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG 74
Query: 88  ILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID 147
              +A        +A+ AD+  +   +  V ++V  +G +DI+V NA +      ++++ 
Sbjct: 75  AGGQA--------IALEADVSDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLK 126
Query: 148 EERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEP--LWHSPE---------- 193
               +     N+   F     ++ ++ +  G AI+  +S+     + +P           
Sbjct: 127 PFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAA 186
Query: 194 ----ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSEVPMKRA----GQ 244
                + LAL+L +  IRVN V PG I T +  ++    EE      E P  +     GQ
Sbjct: 187 QVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQ 246
Query: 245 PI---EVAPCYVFLACNHCSSYITG 266
           P    +VA    FL     + ++TG
Sbjct: 247 PGRSEDVAELIRFLVSER-ARHVTG 270

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 27/242 (11%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVAL+TG  SGIG A A          A             E L  L +  T+    
Sbjct: 5   LQGKVALITGASSGIGEATARAL-------AAEGAAVAIAARRVEKLRALGDELTAAGAK 57
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +  D+   +     V   V A G +DILVNNA +    G VE+ D     R   TN+
Sbjct: 58  VHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIXL-LGPVEDADTTDWTRXIDTNL 116
Query: 160 FSHFFMTRHSLRH-MNEGSAIINTTSV--------EPLWHSPE------ARGLALQLVER 204
               + TR +L H +     ++  +S+          ++ + +      +  L  ++ ER
Sbjct: 117 LGLXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTER 176
Query: 205 GIRVNGVAPGPIWTPL---IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
           G+RV  + PG   T L   I  + ++E   Q  S++  K   Q I  A  Y   A +H +
Sbjct: 177 GVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQI-RKLQAQDIAEAVRYAVTAPHHAT 235
Query: 262 SY 263
            +
Sbjct: 236 VH 237

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 51/278 (18%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGAT-------------VAFTYVKSQEEKDAQ 83
           + ++ GKVA VTG   G GR+ A   A EGA              V  T + +   +D  
Sbjct: 6   TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLA 65
Query: 84  ETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSV 143
           ET ++++       +  +    D+   +  K  VD  V   G++DI+V NA +     ++
Sbjct: 66  ETADLVK----GHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTL 121
Query: 144 EEIDEERLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA------ 194
           ++  EE    +   N+   +   +  + HM     G +II T+SV  L   P        
Sbjct: 122 DKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAA 181
Query: 195 --------RGLALQLVERGIRVNGVAPGPIWTPLI---------------PSSFSEEESA 231
                   R   ++L +  IRVN V P  + TP++               P         
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC 241
Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
           Q    +P+    +PI+++   +F A +  + YITG  L
Sbjct: 242 QMFHTLPIPWV-EPIDISNAVLFFASDE-ARYITGVTL 277

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE------KDAQETLEILR 90
           + K+ GKVA +TG   G GR+ A   A EGA +    V  Q +          +  E +R
Sbjct: 23  AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVR 82
Query: 91  EAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
           + +    +  +A   D+   +  +  VD+ V   G++DI++ NAA+  +   +  +D + 
Sbjct: 83  QVEAL-GRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT 141
Query: 151 LERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE-------------- 193
              +   N+   +   R ++ H+     G +I+ T+S+  L  +                
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGL 201
Query: 194 ARGLALQLVERGIRVNGVAPGPIWTPLI 221
            R +AL+L  R IRVN V P  + TP++
Sbjct: 202 MRTMALELGPRNIRVNIVCPSSVATPML 229

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 29  FTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI 88
           F  H   P  +  G+V LVTG  +G+GRA A  +A  GA V    +    +   + +L  
Sbjct: 18  FQGHMGSPL-RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAA 76
Query: 89  LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
            +  +    +   A+ A+    E  ++VV   ++A+G+ID++VNNA +  +  S   I +
Sbjct: 77  DKVVEEIRRRGGKAV-ANYDSVEEGEKVVKTALDAFGRIDVVVNNAGI-LRDRSFARISD 134
Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLW 189
           E  + + R ++   F +TR +  HM +     II T+S   ++
Sbjct: 135 EDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIY 177

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 36/257 (14%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           ++GK+A+VT G SG+G A A   A  GA +   + +++E+ +A  +    R A       
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARL-LLFSRNREKLEAAAS----RIASLVSGAQ 59
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              ++ D+    +  R+ ++  +  G  DILV +     + G   E+  E  +  +R   
Sbjct: 60  VDIVAGDIREPGDIDRLFEKARD-LGGADILVYSTG-GPRPGRFMELGVEDWDESYRLLA 117
Query: 160 FSHFFMTRHSLRHMNE---GSAI-INTTSVEPLWHSPE------------ARGLALQLVE 203
            S  ++ R +   M E   G  + I + ++   W                 R LAL+L  
Sbjct: 118 RSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAP 177
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFG-----------SEVPMKRAGQPIEVAPCY 252
            G+ VN V P  I T  +  S +EE + + G           S +PM R G+P E+A   
Sbjct: 178 HGVTVNAVLPSLILTDRV-RSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVV 236
Query: 253 VFLACNHCSSYITGQVL 269
            FLA     S+ITG V+
Sbjct: 237 AFLASEKA-SFITGAVI 252

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           ++A VTGG  GIG ++      +G  V      +    ++   ++ L + K +   D  A
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRVV-----AGCGPNSPRRVKWLEDQK-ALGFDFYA 67
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              ++G  ++ K+  D+V    G+ID+LVNNA +        ++  E  + V  TN+ S 
Sbjct: 68  SEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDV-VFRKMTREDWQAVIDTNLTSL 126
Query: 163 FFMTRHSLRHMNE--GSAIINTTSV--------EPLWHSPEA------RGLALQLVERGI 206
           F +T+  +  M E     IIN +SV        +  + + +A        LA ++  +G+
Sbjct: 127 FNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV 186
Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN V+PG I T ++  +   +   +  + +P++R G P E+     +LA    S + TG
Sbjct: 187 TVNTVSPGYIGTDMVK-AIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEE-SGFSTG 244
Query: 267 QVLHPN 272
                N
Sbjct: 245 ADFSLN 250

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 36/187 (19%)
Query: 110 DENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER------LERVFRTNIFSHF 163
           D  C+  V + +  +G++D LVNNA V    G    +D  R      LER    N+  ++
Sbjct: 67  DAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG----LDAGRDAFVASLER----NLIHYY 118
Query: 164 FMTRHSLRHMNEG-SAIINTTSVEPLWHSPEARG--------------LALQLVERGIRV 208
            M  + + H+     AI+N +S   +       G               A+ L E G+RV
Sbjct: 119 AMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRV 178
Query: 209 NGVAPGPIWTPLIP---SSFSEEES--AQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSS 262
           N V P  + TPL     ++F + E+  A+  ++VP+ +R   P E+A   VFL     +S
Sbjct: 179 NAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPR-AS 237
Query: 263 YITGQVL 269
           + TG+ L
Sbjct: 238 HTTGEWL 244

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 44/262 (16%)
Query: 33  DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           D K  + L G+VA+VTG   GIG A+A      GA V  T       +D ++   + RE 
Sbjct: 20  DDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLT------ARDVEKLRAVEREI 73
Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
             +   +  + + DL   +        V+ A+G+ D+LVNNA V +  G +  +     +
Sbjct: 74  -VAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWD 132
Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGSA--IINTTSVEPLWHSPEARGLAL----------- 199
            +   N+ + + + R     M       IIN +S+     +P A G A            
Sbjct: 133 ALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG--KNPVADGAAYTASKWGLNGLM 190
Query: 200 -----QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAG----QPIEVAP 250
                +L +  +RV+ VAPG + T             +FG  +  K++     +P ++A 
Sbjct: 191 TSAAEELRQHQVRVSLVAPGSVRT-------------EFGVGLSAKKSALGAIEPDDIAD 237
Query: 251 CYVFLACNHCSSYITGQVLHPN 272
               LA     S+I+  ++ P 
Sbjct: 238 VVALLATQADQSFISEVLVRPT 259

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 29  FTSHDYKPS-NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLE 87
           F    Y+P  + L  ++ LVTG   GIGR  A  YA  GATV    +   EEK  Q    
Sbjct: 19  FQGXHYQPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVIL--LGRNEEKLRQVASH 76
Query: 88  ILREAKTSDAKDPMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE 145
           I  E      + P     DL     ENC+++   +V  Y ++D +++NA +        E
Sbjct: 77  INEET----GRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSE 132
Query: 146 IDEERLERVFRTNI---FSHFFMTRHSLRHMNEGSAIINTTSV----EPLWHSPEARGLA 198
            + +  + V + N+   F         L   + GS +  ++SV       W +  A   A
Sbjct: 133 QNPQVWQDVXQINVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFA 192
Query: 199 LQ--------LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAP 250
            +          ++ +RVN + PG   T    S+F  E+  +  +         P ++ P
Sbjct: 193 TEGXXQVLADEYQQRLRVNCINPGGTRTAXRASAFPTEDPQKLKT---------PADIXP 243
Query: 251 CYVFL 255
            Y++L
Sbjct: 244 LYLWL 248

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 58/277 (20%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA-QETLEILR-------EAKTS 95
           VALVTG    +GR++A     EG  V   Y +S  E +A   TL   R       +A  S
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70
Query: 96  D-AKDPMA---ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEI----- 146
           + A  P++    SA +     C  +V      +G+ D+LVNNA+  Y    +        
Sbjct: 71  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 130
Query: 147 ----DEERLER----VFRTNIFSHFFMTR---HSL-----RHMNEGSAIINTTSVEPLWH 190
               D E +E     +F +N  + +F+ +   H +     +H     +IIN   V+ + +
Sbjct: 131 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM--VDAMTN 188
Query: 191 SP----------------EARGLALQLVERGIRVNGVAPG-PIWTPLIPSSFSEEESAQF 233
            P                  R  AL+L    IRVNGV PG  +    +P +  E      
Sbjct: 189 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHR--- 245
Query: 234 GSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
            S+VP+ +R     EV+   +FL C+  + YITG  +
Sbjct: 246 -SKVPLYQRDSSAAEVSDVVIFL-CSSKAKYITGTCV 280

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFM 165
           D+  ++   R VD V   +G++  +V+ A      G + ++D E   R    N+    ++
Sbjct: 71  DITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYV 130
Query: 166 TRHSLRHM--NEGSAIINTTSVEP----LWH-----SPEARGLALQLV--ERG---IRVN 209
            +H+ R M    G + +  +S+       W      +  A    +QL   E G   +RVN
Sbjct: 131 LKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVN 190
Query: 210 GVAPGPIWTPLIPS-SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV 268
            + PG I T L+ + + S E S+ +    P+ R G+  +VA   +FL  +  +S++TGQV
Sbjct: 191 SIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSD-AASFVTGQV 249
Query: 269 LH 270
           ++
Sbjct: 250 IN 251

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 58/277 (20%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA-QETLEILR-------EAKTS 95
           VALVTG    +GR++A     EG  V   Y +S  E +A   TL   R       +A  S
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107
Query: 96  D-AKDPMA---ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEI----- 146
           + A  P++    SA +     C  +V      +G+ D+LVNNA+  Y    +        
Sbjct: 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 167
Query: 147 ----DEERLER----VFRTNIFSHFFMTR---HSL-----RHMNEGSAIINTTSVEPLWH 190
               D E +E     +F +N  + +F+ +   H +     +H     +IIN   V+ + +
Sbjct: 168 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM--VDAMTN 225
Query: 191 SP----------------EARGLALQLVERGIRVNGVAPG-PIWTPLIPSSFSEEESAQF 233
            P                  R  AL+L    IRVNGV PG  +    +P +  E      
Sbjct: 226 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHR--- 282
Query: 234 GSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
            S+VP+ +R     EV+   +FL C+  + YITG  +
Sbjct: 283 -SKVPLYQRDSSAAEVSDVVIFL-CSSKAKYITGTCV 317

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 58/277 (20%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA-QETLEILR-------EAKTS 95
           VALVTG    +GR++A     EG  V   Y +S  E +A   TL   R       +A  S
Sbjct: 27  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 86
Query: 96  D-AKDPMA---ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEI----- 146
           + A  P++    SA +     C  +V      +G+ D+LVNNA+  Y    +        
Sbjct: 87  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 146
Query: 147 ----DEERLER----VFRTNIFSHFFMTR---HSL-----RHMNEGSAIINTTSVEPLWH 190
               D E +E     +F +N  + +F+ +   H +     +H     +IIN   V+ + +
Sbjct: 147 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM--VDAMTN 204
Query: 191 SP----------------EARGLALQLVERGIRVNGVAPG-PIWTPLIPSSFSEEESAQF 233
            P                  R  AL+L    IRVNGV PG  +    +P +  E      
Sbjct: 205 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHR--- 261
Query: 234 GSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
            S+VP+ +R     EV+   +FL C+  + YITG  +
Sbjct: 262 -SKVPLYQRDSSAAEVSDVVIFL-CSSKAKYITGTCV 296

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 58/277 (20%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA-QETLEILR-------EAKTS 95
           VALVTG    +GR++A     EG  V   Y +S  E +A   TL   R       +A  S
Sbjct: 8   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 67
Query: 96  D-AKDPMA---ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEI----- 146
           + A  P++    SA +     C  +V      +G+ D+LVNNA+  Y    +        
Sbjct: 68  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 127
Query: 147 ----DEERLER----VFRTNIFSHFFMTR---HSL-----RHMNEGSAIINTTSVEPLWH 190
               D E +E     +F +N  + +F+ +   H +     +H     +IIN   V+ + +
Sbjct: 128 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM--VDAMTN 185
Query: 191 SP----------------EARGLALQLVERGIRVNGVAPG-PIWTPLIPSSFSEEESAQF 233
            P                  R  AL+L    IRVNGV PG  +    +P +  E      
Sbjct: 186 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHR--- 242
Query: 234 GSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
            S+VP+ +R     EV+   +FL C+  + YITG  +
Sbjct: 243 -SKVPLYQRDSSAAEVSDVVIFL-CSSKAKYITGTCV 277

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 33/240 (13%)
Query: 34  YKPS-NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           Y+P  + L  ++ LVTG   GIGR  A  YA  GATV    +   EEK  Q    I  E 
Sbjct: 3   YQPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVIL--LGRNEEKLRQVASHINEET 60
Query: 93  KTSDAKDPMAISADL--GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
                + P     DL     ENC+++   +   Y ++D +++NA +        E + + 
Sbjct: 61  ----GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQV 116
Query: 151 LERVFRTNI---FSHFFMTRHSLRHMNEGSAIINTTSV----EPLWHSPEARGLALQ--- 200
            + V + N+   F         L   + GS +  ++SV       W +  A   A +   
Sbjct: 117 WQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXX 176
Query: 201 -----LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
                  ++ +RVN + PG   T +  S+F  E+  +  +         P ++ P Y++L
Sbjct: 177 QVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKT---------PADIXPLYLWL 227

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 32/253 (12%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE---KDAQETLEILREAKTSDAK 98
           G+V +VTG   GIGRA A  +A EGA V    +    +          + + +  T+   
Sbjct: 27  GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG 86
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           + +A  +++   +    ++   V  +G +D+LVNNA +  +   +    EE  + V   +
Sbjct: 87  EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI-VRDRMIANTSEEEFDAVIAVH 145
Query: 159 IFSHFFMTRHSLRHM----NEGSA----IINTTSVEPLW-------HSPEARGLA-LQLV 202
           +  HF   RH+  +       G A    IINT+S   L        +S    G+A L LV
Sbjct: 146 LKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLV 205
Query: 203 ------ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
                   G+ VN +AP    T +  + F+E  + Q      M     P  V+P  V+L 
Sbjct: 206 GAAEMGRYGVTVNAIAP-SARTRMTETVFAEMMATQDQDFDAMA----PENVSPLVVWLG 260
Query: 257 CNHCSSYITGQVL 269
                  +TG+V 
Sbjct: 261 SAEARD-VTGKVF 272

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 98/250 (39%), Gaps = 45/250 (18%)
Query: 31  SHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEIL 89
            H       ++G VA++TGG SG+G A A     +GA+ V      S  E  A++     
Sbjct: 1   GHMAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---- 56
Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-------QYKAGS 142
                    + +   AD+  +++ +  +      +G++D+ VN A +         K G 
Sbjct: 57  -------GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQ 109
Query: 143 VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--------SAIINTTSVEPL------ 188
              +  E  +RV   N+   F + R     M +           IINT SV         
Sbjct: 110 THTL--EDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ 167
Query: 189 -WHSPEARG-------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM- 239
             +S    G       +A  L   GIRV  +APG   TPL+ +S  E+      S+VP  
Sbjct: 168 AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL-TSLPEKVCNFLASQVPFP 226
Query: 240 KRAGQPIEVA 249
            R G P E A
Sbjct: 227 SRLGDPAEYA 236

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           ++G VA++TGG SG+G A A     +GA+ V      S  E  A++              
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----------GN 56
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-------QYKAGSVEEIDEERL 151
           + +   AD+  +++ +  +      +G++D+ VN A +         K G    +  E  
Sbjct: 57  NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTL--EDF 114
Query: 152 ERVFRTNIFSHFFMTRHSLRHMNEG--------SAIINTTSVEPL-------WHSPEARG 196
           +RV   N+   F + R     M +           IINT SV           +S    G
Sbjct: 115 QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
Query: 197 -------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
                  +A  L   GIRV  +APG   TPL+ +S  E+      S+VP   R G P E 
Sbjct: 175 IVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL-TSLPEKVCNFLASQVPFPSRLGDPAEY 233
Query: 249 A 249
           A
Sbjct: 234 A 234

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           ++G VA++TGG SG+G A A     +GA+ V      S  E  A++              
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----------GN 56
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-------QYKAGSVEEIDEERL 151
           + +   AD+  +++ +  +      +G++D+ VN A +         K G    +  E  
Sbjct: 57  NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTL--EDF 114
Query: 152 ERVFRTNIFSHFFMTRHSLRHMNEG--------SAIINTTSVEPL-------WHSPEARG 196
           +RV   N+   F + R     M +           IINT SV           +S    G
Sbjct: 115 QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
Query: 197 -------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV 248
                  +A  L   GIRV  +APG   TPL+ +S  E+      S+VP   R G P E 
Sbjct: 175 IVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL-TSLPEKVRNFLASQVPFPSRLGDPAEY 233
Query: 249 A 249
           A
Sbjct: 234 A 234

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 19/195 (9%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S  L GK   +TG   GIG A+A   A +GA VA     +        T+     A  + 
Sbjct: 1   SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA 60
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               +A+  D+  ++  +  V   V+ +G IDILVNNA+  +  G+++    +R +   +
Sbjct: 61  GGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDT-PXKRFDLXQQ 119
Query: 157 TNIFSHFFMTRHSLRHMNEGS-----AIINTTSVEPLW-------------HSPEARGLA 198
            N    F   +  L H+ +        +    S+ P W              S    GLA
Sbjct: 120 VNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLA 179
Query: 199 LQLVERGIRVNGVAP 213
            +   +G+ +N + P
Sbjct: 180 AEFGPQGVAINALWP 194

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 34  YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAK 93
           ++  +K   K+A+VTG  SG+GRAVA   A  G  VA           A   L+ L+E  
Sbjct: 20  FQSXSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVAL----------AGRRLDALQETA 69
Query: 94  TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER 153
                D + +  D+   ++ + +    V  +G++D+L NNA     A   E++   + ++
Sbjct: 70  AEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQ 129
Query: 154 VFRTNIFSHFFMTRHSLRHMN----EGSAIINTTSVE 186
           V  TN+   F  T+ + R        G  IIN  S+ 
Sbjct: 130 VVDTNLTGPFLCTQEAFRVXKAQEPRGGRIINNGSIS 166

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 27/269 (10%)
Query: 23  MEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA 82
           + P     S   K + +L  K  L+TG  +GIG+A A  Y LE +      + +    + 
Sbjct: 14  LVPRGSHMSQGRKAAERLAKKTVLITGASAGIGKATALEY-LEASNGDMKLILAARRLEK 72
Query: 83  QETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGS 142
            E L+   + +  +AK  +A   D+   E  K  ++ +   +  IDILVNNA     +  
Sbjct: 73  LEELKKTIDQEFPNAKVHVA-QLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR 131
Query: 143 VEEIDEERLERVFRTNIFSHFFMTRHSL---RHMNEGSAIINTTSVEPLWHSPEAR---- 195
           V +I  E ++ VF TN+ +   +T+  L   +  N G  I+N  S+      P       
Sbjct: 132 VGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGD-IVNLGSIAGRDAYPTGSIYCA 190
Query: 196 ----------GLALQLVERGIRVNGVAPGPIWT--PLIPSSFSEEESAQ-FGSEVPMKRA 242
                      L  +L+   IRV  +APG + T   L+    +EE++   +    P+   
Sbjct: 191 SKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPL--- 247
Query: 243 GQPIEVAPCYVFLACNHCSSYITGQVLHP 271
               +VA   V+      ++ I   ++ P
Sbjct: 248 -MADDVADLIVYATSRKQNTVIADTLIFP 275

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 32/215 (14%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           +N+L+ KVA++TGG  GIG   A  +   GA V    +     +     +          
Sbjct: 11  TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI---------- 60
Query: 97  AKDPMAIS---ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA-GSVEEIDEERLE 152
              P  IS    D+  DE+ + +VD  +  +GK+DI+  N  V      S+ E   E  +
Sbjct: 61  -GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFK 119
Query: 153 RVFRTNIFSHFFMTRHSLRHM---NEGSAIINT-----TSVEPLWHSPEA---------R 195
           RV   N++  F + +H+ R M    +GS +        T+ E + H   A          
Sbjct: 120 RVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTT 179
Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES 230
            L  +L E GIRVN V+P  + +PL+   F  + S
Sbjct: 180 SLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS 214

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 33/248 (13%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K  +VTGG+ GIG A     A  GA VA  Y      + A + +E+  +          A
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIY------RSAADAVEVTEKVGKEFGVKTKA 68
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              D+   +   + + ++    G I  L+ NA V        E+  E    V+  N+F  
Sbjct: 69  YQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGV 127
Query: 163 FFMTRHS----LRHMNEGSA---------IINTTSV-----EPLWHSPEA------RGLA 198
           F   R      L+   +GS          IIN +S+     +  ++S +A      +GLA
Sbjct: 128 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 187
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            +    GIRVN ++PG + T        +    Q  S +P+ R  QP E+    + L  +
Sbjct: 188 AEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQ-ASNIPLNRFAQPEEMTGQAILLLSD 246
Query: 259 HCSSYITG 266
           H ++Y+TG
Sbjct: 247 H-ATYMTG 253

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 64/280 (22%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           VALVTG    +G  +A     EG  V   Y +S  E +   TL     A+  ++  P  +
Sbjct: 8   VALVTGAAKRLGSGIAEGLHAEGYAVCLHYHRSAAEAN---TLAATLNARRPNSAIP--V 62
Query: 104 SADLG-----------------FDENCKRVVDEVVNAYGKIDILVNNAAVQY-------- 138
            ADL                    + C  +V      +G+ D+LVNNA+  Y        
Sbjct: 63  QADLSNVAKAPAGGADGAAPVTLFKRCADLVAACYTHWGRCDVLVNNASSFYPTPLLRKD 122
Query: 139 KAGSVEEI-DEERLER----VFRTNIFSHFFMTRHSLRHMNEGSA-----------IINT 182
           + G V  + D E +E     +F +N  + +F+ +     + +  A           +++ 
Sbjct: 123 EDGHVPCVGDREAMEAAAADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDA 182
Query: 183 TSVEPLWHSP-----------EARGLALQLVERGIRVNGVAPG-PIWTPLIPSSFSEEES 230
            + +PL                 R  AL+L    IRVNGV PG  +    +P +  E+  
Sbjct: 183 MTSQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLADDMPPAVRED-- 240
Query: 231 AQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
             + S+VP+ +R     EV+   +FL C+  + Y+TG  +
Sbjct: 241 --YRSKVPLYQRDSSAAEVSDVVIFL-CSSKAKYVTGTCV 277

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 38/248 (15%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDP 100
           G  ALVTG   GIGR         GA  VA T   S          +++  AK     +P
Sbjct: 7   GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS----------DLVSLAKECPGIEP 56
Query: 101 MAISADLG-FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
           + +  DLG +D       ++ +   G +D+LVNNAA+      + E+ +E  +R F  N+
Sbjct: 57  VCV--DLGDWDAT-----EKALGGIGPVDLLVNNAALVIMQPFL-EVTKEAFDRSFSVNL 108
Query: 160 FSHFFMTRHSLRHM-NEG--SAIINTTSVEPLWHSPE--------------ARGLALQLV 202
            S F +++   R M N G   +I+N +S+      P                + +A++L 
Sbjct: 109 RSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 168
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVFLACNHCS 261
              IRVN V P  + T +     ++ E A+   E  P+++  +  +V    +FL  +  +
Sbjct: 169 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 228
Query: 262 SYITGQVL 269
           S   G +L
Sbjct: 229 STSGGGIL 236

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVAPCYVFLA 256
           A  L   GIRVN +APG + TP++  S  EE  A+F + +P  KR G P E A    FL 
Sbjct: 202 ARDLSSAGIRVNTIAPGTMKTPIM-ESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLL 260
Query: 257 CNHCSSYITGQVLH 270
            N    YI G+V+ 
Sbjct: 261 TN---GYINGEVMR 271

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           ++G VA++TGG SG+G + A     +GAT     V + E +          EAK      
Sbjct: 7   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGET---------EAKKLGGNC 57
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE-----ERLERV 154
             A  A++  ++  +  +      +G+ID+ VN A +     +  E        E  +RV
Sbjct: 58  IFA-PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRV 116
Query: 155 FRTNIFSHFFMTRHSLRHMNEG--------SAIINTTSVEPL-------WHSPEARG--- 196
              N+   F + R     M +           IINT SV           +S    G   
Sbjct: 117 INVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVG 176
Query: 197 ----LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVA 249
               +A  L   GIRV  +APG   TPL+ ++  ++      S+VP   R G P E A
Sbjct: 177 MTLPIARDLAPIGIRVVTIAPGLFATPLL-TTLPDKVRNFLASQVPFPSRLGDPAEYA 233

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K ALVTG   G+G+A A   A  G  +   Y +S+  K A ET E + +         + 
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK--KAALETAEEIEKLGVK----VLV 58
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + A++G     K +  ++   +G++D+ VNNAA       V E++E   +     N  + 
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWTMNINAKAL 117
Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPLWH------------SPEA--RGLALQLVERGI 206
            F  + + + M  N G  I++ +S+  + +            + EA  R LA++L  + I
Sbjct: 118 LFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQI 177
Query: 207 RVNGVAPGPIWT 218
            VN V+ G I T
Sbjct: 178 IVNAVSGGAIDT 189

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           ++G VA++TGG SG+G + A     +GAT     V + E +          EAK      
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGET---------EAKKLGGNC 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE-----ERLERV 154
             A  A++  ++  +  +      +G+ID+ VN A +     +  E        E  +RV
Sbjct: 59  IFA-PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRV 117
Query: 155 FRTNIFSHFFMTRHSLRHMNEG--------SAIINTTSVEPL-------WHSPEARG--- 196
              N+   F + R     M +           IINT SV           +S    G   
Sbjct: 118 INVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVG 177
Query: 197 ----LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVA 249
               +A  L   GIRV  +APG   TPL+ ++  ++      S+VP   R G P E A
Sbjct: 178 MTLPIARDLAPIGIRVVTIAPGLFATPLL-TTLPDKVRNFLASQVPFPSRLGDPAEYA 234

>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  L+TG   +  I   +A     EGA +AFTYV   + KD  E L        ++ 
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYV--GQFKDRVEKL-------CAEF 74
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
                +  D+  D+  K +  E+   +  +D +V++ A     Q +   ++ +  E    
Sbjct: 75  NPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSI 134
Query: 154 VFRTNIFSHFFMTRHSLRHM-NEGSAII--------------NTTSVEPLWHSPEARGLA 198
               + +S   + +     M N  ++++              NT  V         R  A
Sbjct: 135 AHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTA 194
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVFLAC 257
           L L E GI+VN V+ GPI T       + ++   + + V P+K+    +EV     FL C
Sbjct: 195 LALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFL-C 253
Query: 258 NHCSSYITGQVLHPN 272
           +  ++ ITG+V+H +
Sbjct: 254 SDMATGITGEVVHVD 268

>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  L+TG   +  I   +A     EGA +AFTYV   + KD  E L        ++ 
Sbjct: 4   LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYV--GQFKDRVEKL-------CAEF 54
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
                +  D+  D+  K +  E+   +  +D +V++ A     Q +   ++ +  E    
Sbjct: 55  NPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSI 114
Query: 154 VFRTNIFSHFFMTRHSLRHM-NEGSAII--------------NTTSVEPLWHSPEARGLA 198
               + +S   + +     M N  ++++              NT  V         R  A
Sbjct: 115 AHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTA 174
Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVFLAC 257
           L L E GI+VN V+ GPI T       + ++   + + V P+K+    +EV     FL C
Sbjct: 175 LALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFL-C 233
Query: 258 NHCSSYITGQVLHPN 272
           +  ++ ITG+V+H +
Sbjct: 234 SDMATGITGEVVHVD 248

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 94/238 (39%), Gaps = 39/238 (16%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           ++G VA++TGG SG+G + A     +GAT     V + E +          EAK      
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGET---------EAKKLGGNC 58
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE-----ERLERV 154
             A  A++  ++  +  +      +G+ID+ VN A +     +  E        E  +RV
Sbjct: 59  IFA-PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRV 117
Query: 155 FRTNIFSHFFMTRHSLRHMNEG--------SAIINTTSVEPL-------WHSPEARG--- 196
              N+   F + R     M +           IINT SV           +S    G   
Sbjct: 118 INVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVG 177
Query: 197 ----LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVA 249
               +A  L   GIRV  +APG   TPL+ ++  +       S+VP   R G P E A
Sbjct: 178 MTLPIARDLAPIGIRVVTIAPGLFATPLL-TTLPDTVRNFLASQVPFPSRLGDPAEYA 234

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L G    +TG   GIG+A+A   A +GA +      +Q       T+    E   + 
Sbjct: 40  TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV 99
Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               +    D+  ++     V++ +  +G IDILVNNA+      +++    +RL+ +  
Sbjct: 100 GGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDT-PTKRLDLMMN 158
Query: 157 TNIFSHFFMTRHSLRHMNEGSA--IINTT---SVEPLW 189
            N    +  ++  + ++ +     I+N +   ++ P+W
Sbjct: 159 VNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW 196

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE---KDAQETLEILREAKTS 95
           +  G+V LVTG   G+GRA A  +A  GA V    +    +   K +    +++ E +  
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
             K      A+    E  +++V   ++ +G+ID++VNNA +  +  S   I +E  + + 
Sbjct: 66  GGK----AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI-LRDRSFSRISDEDWDIIQ 120
Query: 156 RTNIFSHFFMTRHSLRHMNEGS--AIINTTSVEPLW 189
           R ++   F +TR +  H  + +   II T S   ++
Sbjct: 121 RVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIY 156

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 40/250 (16%)
Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GKV ++T    GIG+A A  +A EGA V  T +                E+K  + +
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN---------------ESKLQELE 47
Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               I   +  D   K+ +D+  N   ++D+L N A   +  G+V + +E+  +     N
Sbjct: 48  KYPGIQTRV-LDVTKKKQIDQFANEVERLDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLN 105
Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEP---------LWHSPEA------RGLALQL 201
           + S + M +  L  M   +   IIN +SV           ++ + +A      + +A   
Sbjct: 106 VRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADF 165
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           +++GIR N V PG + TP +          EE    F       R     E+A   V+LA
Sbjct: 166 IQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA 225
Query: 257 CNHCSSYITG 266
            +  S+Y+TG
Sbjct: 226 SDE-SAYVTG 234

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 31/254 (12%)
Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK ALV G      +G A+A      GA VA +Y   +   +A++  E L  A     
Sbjct: 6   LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA----- 60
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFR 156
              +   AD+  DE    +   V  A+G +D LV+  A    +A     ID  R + +  
Sbjct: 61  ---LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAXEGRYIDTRRQDWLLA 117
Query: 157 TNI--FSHFFMTRHSLRHMNEGSAIINTT-----SVEPLWH---------SPEARGLALQ 200
             +  +S   + R +   + EG  I+  T      V P ++             R LA +
Sbjct: 118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVXAIAKAALEASVRYLAYE 177
Query: 201 LVERGIRVNGVAPGPIWTPLIPS--SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           L  +G+RVN ++ GP+ T    S   F++    +     P++R     EV    +FL  +
Sbjct: 178 LGPKGVRVNAISAGPVRTVAARSIPGFTKXYD-RVAQTAPLRRNITQEEVGNLGLFL-LS 235
Query: 259 HCSSYITGQVLHPN 272
             +S ITG+V++ +
Sbjct: 236 PLASGITGEVVYVD 249

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 35/248 (14%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+  LVTG   GIGR         GA V     ++Q + D+     ++RE       +
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARV-VAVSRTQADLDS-----LVRECP---GIE 55
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
           P+ +  DLG  E  +R +  V    G +D+LVNNAAV      + E+ +E  +R F  N+
Sbjct: 56  PVCV--DLGDWEATERALGSV----GPVDLLVNNAAVALLQPFL-EVTKEAFDRSFEVNL 108
Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSV--------EPLWHSPEA------RGLALQLV 202
            +   +++   R +       AI+N +S           ++ S +       + +AL+L 
Sbjct: 109 RAVIQVSQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELG 168
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQ-FGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              IRVN V P  + T +  +++S+   A+   + +P+ +  +   V    +FL  +  S
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR-S 227
Query: 262 SYITGQVL 269
              TG  L
Sbjct: 228 GMTTGSTL 235

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L+GK  L+ G   +  I   +A     +GAT+AFTY+    EK  +   +        + 
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQ--------EL 55
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERV 154
             P     D+  +E+ K + + V    G +D +V++ A   K    GS+ E  +      
Sbjct: 56  NSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTA 115
Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH-----------SPEARGLALQ 200
              +++S   +T      +N G++++  +   S + + H               R LA+ 
Sbjct: 116 MEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVD 175
Query: 201 LVERGIRVNGVAPGPIWT 218
           L +  IRVN ++ GPI T
Sbjct: 176 LGKHHIRVNALSAGPIRT 193

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 43  KVALVTGGDSGIGRAVAH--CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP 100
           +VALVTG + GIG A+A   C    G  V    + +++    Q  ++ L+    S    P
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDVV----LTARDVARGQAAVQQLQAEGLS----P 54
Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
                D+   ++ + + D +   YG +++LVNNAAV +K+      D  + E   +TN F
Sbjct: 55  RFHQLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFD-IKAEMTLKTNFF 113
Query: 161 SHFFMTRHSLRHMNEGSAIINTTSVEPL 188
           +   M    L  M     ++N +S++ L
Sbjct: 114 ATRNMCNELLPIMKPHGRVVNISSLQCL 141

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 35/248 (14%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+  LVTG   GIGR         GA V     ++Q + D+     ++RE       +
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARV-VAVSRTQADLDS-----LVRECP---GIE 55
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
           P+ +  DLG  E  +R +  V    G +D+LVNNAAV      + E+ +E  +R F  N+
Sbjct: 56  PVCV--DLGDWEATERALGSV----GPVDLLVNNAAVALLQPFL-EVTKEAFDRSFEVNL 108
Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSV--------EPLWHSPEA------RGLALQLV 202
            +   +++   R +       AI+N +S           ++ S +       + +AL+L 
Sbjct: 109 RAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG 168
Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQ-FGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              IRVN V P  + T +  +++S+   A+   + +P+ +  +   V    +FL  +  S
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR-S 227
Query: 262 SYITGQVL 269
              TG  L
Sbjct: 228 GMTTGSTL 235

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 29  FTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYA-LEGATVAFTYVKSQEEKDAQETLE 87
           F  H  K    + G++ L+TG   GIGR  A+ +A L+   V +   K   E+ A +   
Sbjct: 18  FQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG 77
Query: 88  ILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID 147
           +  +  T           D    E+      +V    G + ILVNNA V Y +      D
Sbjct: 78  LGAKVHT--------FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQD 129
Query: 148 EERLERVFRTNIFSHFFMTRHSLRHMNE 175
            + +E+ F  N+ +HF+ T+  L  M +
Sbjct: 130 PQ-IEKTFEVNVLAHFWTTKAFLPAMTK 156

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 107/275 (38%), Gaps = 57/275 (20%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE---------KDAQETLEILR 90
             GK AL+TGG  G+GR+ A   A  GA +A        +          D  ET+ ++ 
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 91  E------AKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE 144
           +      +   D KD  A+          +  V E  +  G IDI + NA +   A  + 
Sbjct: 68  KTGRRCISAKVDVKDRAAL----------ESFVAEAEDTLGGIDIAITNAGISTIA-LLP 116
Query: 145 EIDEERLERVFRTNIFSHF---------FMTRHSLRHMNEGSAIINTTSVEPLWHSPEAR 195
           E++  + + V  TN+   F          + R+  R +   S + ++ +     +     
Sbjct: 117 EVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKW 176
Query: 196 GL-------ALQLVERGIRVNGVAPGPIWTPLIPSSF--------------SEEESAQFG 234
           G+       A  LV  GI VN VAPG I TP+  + F               + ES    
Sbjct: 177 GVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS 236
Query: 235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
             +      +P EV    +FL  +  SS+ITG VL
Sbjct: 237 LHLQYAPFLKPEEVTRAVLFL-VDEASSHITGTVL 270

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 107/277 (38%), Gaps = 53/277 (19%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVA----------FTYVKSQEEKDAQETL 86
           + ++ GKVA ++G   G GR+ A   A EGA +             Y  S  E D  ET 
Sbjct: 10  TGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPE-DLAETA 68
Query: 87  EILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEI 146
           +++++      +  +    D+   E  K  VD  V   G++DI+V NA V      + +I
Sbjct: 69  DLVKDLD----RRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKI 124
Query: 147 DEERLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA--------- 194
            +   + +   N+   +   +  + H+     G +I+ T+SV      P           
Sbjct: 125 RDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHG 184
Query: 195 -----RGLALQLVERGIRVNGVAPGPIWTPLI-----------------PSSFSEEESAQ 232
                R  A++L    IRVN V P  + T ++                 P  F+      
Sbjct: 185 VIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMM 244
Query: 233 FGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
               VP   A    +++   +FLA +  S Y+TG  L
Sbjct: 245 HTLPVPWVDAS---DISNAVLFLASDE-SRYVTGVSL 277

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 30/258 (11%)
Query: 25  PTPQFTSHD-YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQ 83
           P    T+ D Y    +L GK AL+TG   GIG  +A  +A  GA +  +       +D  
Sbjct: 2   PGSMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLS------GRDVS 55
Query: 84  ETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSV 143
           E     R        D   ++ DL   +    +      A+G +D+LVNNA + +    V
Sbjct: 56  ELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ-PV 114
Query: 144 EEIDEERLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINT----------------TS 184
            + D +  +     N+ +   +     + M    EG AII                  TS
Sbjct: 115 VDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTS 174
Query: 185 VEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE-ESAQFGSEVPMKRAG 243
              L  + +   LA +L   GIR N V P  + T +    + +E +SA   + +P+ R  
Sbjct: 175 KAGLVMATKV--LARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFA 232
Query: 244 QPIEVAPCYVFLACNHCS 261
            P EV+   V+LA +  S
Sbjct: 233 VPHEVSDAVVWLASDAAS 250

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 31/254 (12%)
Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK ALV G      +G A+A      GA VA +Y   +   +A++  E L  A     
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA----- 60
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFR 156
              +   AD+  DE    +   V  A+G +D LV+  A    +A     ID  R + +  
Sbjct: 61  ---LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117
Query: 157 TNI--FSHFFMTRHSLRHMNEGSAIINTT-----SVEPLWH---------SPEARGLALQ 200
             +  +S   + R +   + EG  I+  T      V P ++             R LA +
Sbjct: 118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE 177
Query: 201 LVERGIRVNGVAPGPIWTPLIPS--SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           L  +G+RVN ++ GP+ T    S   F++    +     P++R     EV    +FL  +
Sbjct: 178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYD-RVAQTAPLRRNITQEEVGNLGLFL-LS 235
Query: 259 HCSSYITGQVLHPN 272
             +S ITG+V++ +
Sbjct: 236 PLASGITGEVVYVD 249

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 39  KLR--GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD--AQETLEILREAKT 94
           KLR  G+VA+VTG  +G+GR  A  +A  GA V    +      D  +Q   +I+ +   
Sbjct: 14  KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR 73
Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
               + +A   D     +  +V++  + A+G++DILVNNA +  +  S+ +  E+    V
Sbjct: 74  KAGGEAVA---DYNSVIDGAKVIETAIKAFGRVDILVNNAGI-LRDRSLVKTSEQDWNLV 129
Query: 155 FRTNIFSHFFMTRHSLRHM---NEGSAIINTTS 184
              ++   F  T+ +  +M   N G  I+ +++
Sbjct: 130 NDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSN 162

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD-AQETLEILREAKTSDAKDPMAI 103
            +VTGG  GIG+ +   +   G  V F  +  +   D A+E   +       D  DP+ +
Sbjct: 5   VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFY--FHGDVADPLTL 62
Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHF 163
                     K+ V+  +    +ID+LVNNA    K G +  +  E  + +    + + +
Sbjct: 63  ----------KKFVEYAMEKLQRIDVLVNNACRGSK-GILSSLLYEEFDYILSVGLKAPY 111
Query: 164 FMTRHSLRHM--NEGSAIINTTSVEPLWHSPE------ARGLALQLVER-------GIRV 208
            ++R     +  N+G  IIN  S       P+      A+G  + L           + V
Sbjct: 112 ELSRLCRDELIKNKGR-IINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPDVLV 170
Query: 209 NGVAPGPIWTPLIPSS-FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQ 267
           N +APG  W  +     F++E+ A     +P  + G P +++   +FL C     +ITG+
Sbjct: 171 NCIAPG--WINVTEQQEFTQEDCAA----IPAGKVGTPKDISNMVLFL-CQQ--DFITGE 221
Query: 268 VL 269
            +
Sbjct: 222 TI 223

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 15/148 (10%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           ++G V L+TG   GIG A A     +G  V      +++EK  Q        A  ++ + 
Sbjct: 4   MKGAV-LITGASRGIGEATARLLHAKGYRVGLM---ARDEKRLQ--------ALAAELEG 51
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + +  D+  + +  R V  +  A+G++  LVNNA V      V E+  E    V  TN+
Sbjct: 52  ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMK-PVHELTLEEWRLVLDTNL 110
Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSV 185
              F   RH++  +    G  I+N  S+
Sbjct: 111 TGAFLGIRHAVPALLRRGGGTIVNVGSL 138

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           K+ L+TG  SG GR  A   A  G  V +   +    ++A     I   A+ +D  D   
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRV-YASXRDIVGRNASNVEAIAGFARDNDV-DLRT 63
Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           +  D+    +  R +D+++   G+ID+L++NA      G  E    E+   ++  N+ S 
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG-HXVFGPAEAFTPEQFAELYDINVLST 122
Query: 163 FFMTRHSLRH 172
             + R +L H
Sbjct: 123 QRVNRAALPH 132

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 110/267 (41%), Gaps = 54/267 (20%)
Query: 34  YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI---LR 90
           ++      GKVALVTG   GIG AV    AL  A              A + L +   LR
Sbjct: 20  FQSXQGFEGKVALVTGAAGGIGGAVVT--ALRAAGARVAVADRAVAGIAAD-LHLPGDLR 76
Query: 91  EAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEER 150
           EA  +D   P A++A L                 G++DI+VNNA V  + G + E  +  
Sbjct: 77  EAAYADGL-PGAVAAGL-----------------GRLDIVVNNAGVISR-GRITETTDAD 117
Query: 151 LERVFRTNIFSHFFMTRHS--LRHMNEGSAIINTTSVEPLWHSPEARGLALQLVER---- 204
                  N+ + F + R +  L     G AI+N  S   L   P   G AL  + +    
Sbjct: 118 WSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVNVASCWGLRPGP---GHALYCLTKAALA 174
Query: 205 -------------GIRVNGVAPGPIWTPLIPSSFS------EEESAQFGSEVPMKRAGQP 245
                        GIR+N V P  + TP + + F+      +   A+ G  VP+ R  +P
Sbjct: 175 SLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAKRGFDPDRAVAELGRTVPLGRIAEP 234
Query: 246 IEVAPCYVFLACNHCSSYITGQVLHPN 272
            ++A   +FLA +  + Y+ G ++  N
Sbjct: 235 EDIADVVLFLA-SDAARYLCGSLVEVN 260

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 51/259 (19%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           LRGK AL+T G  G G A    +   GA V  T  +++ E   +E               
Sbjct: 9   LRGKRALITAGTKGAGAATVSLFLELGAQV-LTTARARPEGLPEE--------------- 52
Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNN-AAVQYKAGSVEEIDEERLERVFRTN 158
            + + ADL   E C  V +      G +D++V+         G    + ++        N
Sbjct: 53  -LFVEADLTTKEGCAIVAEATRQRLGGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLN 111
Query: 159 IFSHFFMTRHSL-RHMNEGSA-IINTTSVEPLWHSPE---------------ARGLALQL 201
           +F+   + R  +   +  GS  +++ TS++ +   PE               ++  + ++
Sbjct: 112 LFAAVRLDRQLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEV 171
Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE--------------VPMKRAGQPIE 247
             +G+RV  V+PG I T       +E  + Q G++              +P+ R  +P E
Sbjct: 172 SPKGVRVVRVSPGWIETE-ASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLGRPAKPEE 230
Query: 248 VAPCYVFLACNHCSSYITG 266
           VA    FLA +  +S ITG
Sbjct: 231 VANLIAFLASDRAAS-ITG 248

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 90/249 (36%), Gaps = 41/249 (16%)
Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S ++R  VA+VTGG SG+G A        GA V    ++ +   D    L        +D
Sbjct: 4   SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADLGDRARFAAAD 60
Query: 97  AKDPMAISADLGFDENCK--RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
             D  A+++ L   E     R+V         I +L  +      A            ++
Sbjct: 61  VTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAA----------FRKI 110
Query: 155 FRTNIFSHFFMTRHSLRHM----------NEGSAIINTTSVEPL-------WHSPEARG- 196
              N+   F + R +   +           E   IINT SV           +S    G 
Sbjct: 111 VDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGV 170
Query: 197 ------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVA 249
                 +A  L    IRV  +APG   TPL+ +S  EE  A  G +VP   R G P E  
Sbjct: 171 VGMTLPIARDLASHRIRVMTIAPGLFDTPLL-ASLPEEARASLGKQVPHPSRLGNPDEYG 229
Query: 250 PCYVFLACN 258
              V +  N
Sbjct: 230 ALAVHIIEN 238

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 102/255 (40%), Gaps = 32/255 (12%)
Query: 40  LRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LVTG  S   I   +A     EGA +AFTY   Q +K     L+   E   +  
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDK-----LKGRVEEFAAQL 55
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
              + +  D+  D +   +  E+   + K D  V++ A     Q     V  +  E  + 
Sbjct: 56  GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIAFAPGDQLDGDYVNAVTREGFKI 115
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLAL 199
               + +S   M +     +N GSA++              N   +         R +A 
Sbjct: 116 AHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 175
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +   G+RVN ++ GPI T L  S   +  +  A   +  P++R     +V     FL C
Sbjct: 176 AMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL-C 233
Query: 258 NHCSSYITGQVLHPN 272
           +  S+ I+G+V+H +
Sbjct: 234 SDLSAGISGEVVHVD 248

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 39/265 (14%)
Query: 29  FTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI 88
           F S   +    LRG+ ALVTG   GIG A+A   A  GA V    VK       Q+   I
Sbjct: 20  FQSMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQ--RI 77
Query: 89  LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
           +    T+       ++ DL  +      + E   A   +DILV NA+ Q  A ++  +  
Sbjct: 78  IASGGTAQ-----ELAGDLS-EAGAGTDLIERAEAIAPVDILVINASAQINA-TLSALTP 130
Query: 149 ERLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPL--------WHSPEA---- 194
             L      N+ S   M + +L  M   +   +++  S+  L        + + +A    
Sbjct: 131 NDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHN 190
Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ--------FGSEVPMKRAGQ 244
             +  A       + +N +APG     L+ +  + +  AQ          +   M RAG+
Sbjct: 191 LIQSQARDFAGDNVLLNTLAPG-----LVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGR 245
Query: 245 PIEVAPCYVFLACNHCSSYITGQVL 269
           P E+    +FLA   C S++TG+ +
Sbjct: 246 PEEMVGAALFLASEAC-SFMTGETI 269

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 27/209 (12%)
Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI 103
           +A++TG   GIG  +A   A +G  V       Q  +   +  EI R  K    ++P+ +
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHD--EIXRSNK--HVQEPIVL 64
Query: 104 SADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE-IDEERLERVFRTNIFSH 162
             D+         + ++   YG +DILV NAA  +  GS+ E +D  R  ++   N+ + 
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILV-NAAAXFXDGSLSEPVDNFR--KIXEINVIAQ 121
Query: 163 F--FMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
           +    T   +  + +   I N  S    +   +              A  L  +L   GI
Sbjct: 122 YGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 207 RVNGVAPGPIWTPLIPSS---FSEEESAQ 232
           RV  + PG + T     +   F +EE  Q
Sbjct: 182 RVTTLCPGWVNTDXAKKAGTPFKDEEXIQ 210

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 41/262 (15%)
Query: 35  KPSNKLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           K +  L GK  L+ G   +  I   +A   +  GA +AFTY   Q E   +    +  E 
Sbjct: 7   KGNGLLYGKRGLILGLANNRSIAWGIAKTASSAGAELAFTY---QGEAXKKRVEPLAEEV 63
Query: 93  KT-----SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVE 144
           K       D  D  +I A          V + +   +GK+D LV+      K   +G   
Sbjct: 64  KGFVCGHCDVSDSASIDA----------VFNTIEKKWGKLDFLVHAIGFSDKEELSGRYV 113
Query: 145 EIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT-----SVEPLWH--------- 190
           +I E         +++S   +T+ + +  ++G +I+  T      V P ++         
Sbjct: 114 DISESNFXXTXNISVYSLTALTKRAEKLXSDGGSILTLTYYGAEKVVPNYNVXGVAKAAL 173
Query: 191 SPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE--VPMKRAGQPIEV 248
               + LA+ L  + IRVN ++ GPI T L  S   +       +E   P++R     EV
Sbjct: 174 EASVKYLAVDLGPKHIRVNAISAGPIKT-LAASGIGDFRYILKWNEYNAPLRRTVTIEEV 232
Query: 249 APCYVFLACNHCSSYITGQVLH 270
               ++L  +  S  +TG+V H
Sbjct: 233 GDSALYL-LSDLSRSVTGEVHH 253

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           + G+V +VTG   GIGR +A      GATV   Y+  +      +TL ++ +   S    
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATV---YITGRH----LDTLRVVAQEAQSLGGQ 55
Query: 100 PMAISADLGFDENCKRVVDEV-VNAYGKIDILVNNA------AVQYKAGSVEEIDEERLE 152
            + +  D   +   + + ++V     G++D+LVNNA       +  +  +  E      +
Sbjct: 56  CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 115
Query: 153 RVFRTNIFSHFFMTRHSLRHM---NEGSAIINTT--SVEPLWHSPEARG----------L 197
            +    +  H+F + +  R M    +G  ++ ++  S++ +++ P   G           
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADC 175
Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ 232
           A +L   G+    + PG + T L+    ++EE  Q
Sbjct: 176 AHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQ 210

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 32/255 (12%)
Query: 40  LRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LVTG  S   I   +A     EGA +AFTY   Q +K     L+   E   +  
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDK-----LKGRVEEFAAQL 55
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
              + +  D+  D +   +  E+   + K D  V++ +     Q     V  +  E  + 
Sbjct: 56  GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSISFAPGDQLDGDYVNAVTREGFKI 115
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLAL 199
               + +S   M +     +N GSA++              N   +         R +A 
Sbjct: 116 AHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 175
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +   G+RVN ++ GPI T L  S   +  +  A   +  P++R     +V     FL C
Sbjct: 176 AMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL-C 233
Query: 258 NHCSSYITGQVLHPN 272
           +  S+ I+G+V+H +
Sbjct: 234 SDLSAGISGEVVHVD 248

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 32/255 (12%)
Query: 40  LRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LVTG  S   I   +A     EGA +AFTY   Q +K     L+   E   +  
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDK-----LKGRVEEFAAQL 55
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
              + +  D+  D +   +  E+   + K D  V++       Q     V  +  E  + 
Sbjct: 56  GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKI 115
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLAL 199
               + +S   M +     +N GSA++              N   +         R +A 
Sbjct: 116 AHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 175
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +   G+RVN ++ GPI T L  S   +  +  A   +  P++R     +V     FL C
Sbjct: 176 AMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL-C 233
Query: 258 NHCSSYITGQVLHPN 272
           +  S+ I+G+V+H +
Sbjct: 234 SDLSAGISGEVVHVD 248

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 32/255 (12%)
Query: 40  LRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LVTG  S   I   +A     EGA +AFTY   Q +K     L+   E   +  
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDK-----LKGRVEEFAAQL 54
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
              + +  D+  D +   +  E+   + K D  V++       Q     V  +  E  + 
Sbjct: 55  GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKI 114
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLAL 199
               + +S   M +     +N GSA++              N   +         R +A 
Sbjct: 115 AHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 174
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +   G+RVN ++ GPI T L  S   +  +  A   +  P++R     +V     FL C
Sbjct: 175 AMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL-C 232
Query: 258 NHCSSYITGQVLHPN 272
           +  S+ I+G+V+H +
Sbjct: 233 SDLSAGISGEVVHVD 247

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 32/255 (12%)
Query: 40  LRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LVTG  S   I   +A     EGA +AFTY   Q +K     L+   E   +  
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDK-----LKGRVEEFAAQL 58
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
              + +  D+  D +   +  E+   + K D  V++       Q     V  +  E  + 
Sbjct: 59  GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKI 118
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLAL 199
               + +S   M +     +N GSA++              N   +         R +A 
Sbjct: 119 AHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 178
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +   G+RVN ++ GPI T L  S   +  +  A   +  P++R     +V     FL C
Sbjct: 179 AMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL-C 236
Query: 258 NHCSSYITGQVLHPN 272
           +  S+ I+G+V+H +
Sbjct: 237 SDLSAGISGEVVHVD 251

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 32/255 (12%)
Query: 40  LRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LVTG  S   I   +A     EGA +AFTY   Q +K     L+   E   +  
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDK-----LKGRVEEFAAQL 55
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLER 153
              + +  D+  D +   +  E+   + K D  V++       Q     V  +  E  + 
Sbjct: 56  GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIVFAPGDQLDGDYVNAVTREGFKI 115
Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLAL 199
               + +S   M +     +N GSA++              N   +         R +A 
Sbjct: 116 AHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 175
Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +   G+RVN ++ GPI T L  S   +  +  A   +  P++R     +V     FL C
Sbjct: 176 AMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL-C 233
Query: 258 NHCSSYITGQVLHPN 272
           +  S+ I+G+V+H +
Sbjct: 234 SDLSAGISGEVVHVD 248

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           G+ A VTGG +G+G  +      +G  VA   ++      A  TLE           + M
Sbjct: 8   GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLE-----AEGSGPEVM 62
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV 136
            +  D+   E  K   DEV   +G + IL NNA V
Sbjct: 63  GVQLDVASREGFKMAADEVEARFGPVSILCNNAGV 97

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 99/259 (38%), Gaps = 39/259 (15%)
Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L+GK  +V G      I   +A      GA + FTY   + E++ +E       A T + 
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVREL------ADTLEG 57
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE-IDEERLERVFR 156
           ++ + +  D+  DE      + +    G I  + +  A   +     E +D  R   +  
Sbjct: 58  QESLVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLA 117
Query: 157 TNI--FSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLALQ 200
            NI  FS   + R + + M EG  I+              N   V         + LA  
Sbjct: 118 QNISAFSLTAVAREAKKVMTEGGNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLAND 177
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-------EVPMKRAGQPIEVAPCYV 253
           L + GIRVN ++ GPI T       S +    F S         P++R     EV    V
Sbjct: 178 LGQHGIRVNAISAGPIRT------LSAKGVGDFNSILREIEERAPLRRTTTQEEVGDTAV 231
Query: 254 FLACNHCSSYITGQVLHPN 272
           FL  +  +  +TG+ +H +
Sbjct: 232 FLFSD-LARGVTGENIHVD 249

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 99/259 (38%), Gaps = 39/259 (15%)
Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L+GK  +V G      I   +A      GA + FTY   + E++ +E       A T + 
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVREL------ADTLEG 57
Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE-IDEERLERVFR 156
           ++ + +  D+  DE      + +    G I  + +  A   +     E +D  R   +  
Sbjct: 58  QESLVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLA 117
Query: 157 TNI--FSHFFMTRHSLRHMNEGSAII--------------NTTSVEPLWHSPEARGLALQ 200
            NI  FS   + R + + M EG  I+              N   V         + LA  
Sbjct: 118 QNISAFSLTAVAREAKKVMTEGGNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLAND 177
Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-------EVPMKRAGQPIEVAPCYV 253
           L + GIRVN ++ GPI T       S +    F S         P++R     EV    V
Sbjct: 178 LGQHGIRVNAISAGPIRT------LSAKGVGDFNSILREIEERAPLRRTTTQEEVGDTAV 231
Query: 254 FLACNHCSSYITGQVLHPN 272
           FL  +  +  +TG+ +H +
Sbjct: 232 FLFSD-LARGVTGENIHVD 249

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 44  VALVTGGDSGIGRAVAH--CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           VALVTGG+ GIG A+    C    G  V    + +++    Q  ++ L+    ++   P 
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVV----LTARDVTRGQAAVQQLQ----AEGLSPR 57
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
               D+   ++ + + D +   YG +D+LVNNA + +K         +  E   +TN F 
Sbjct: 58  FHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ-AEVTMKTNFFG 116
Query: 162 HFFMTRHSLRHMNEGSAIINTTSV 185
              +    L  +     ++N +S+
Sbjct: 117 TRDVXTELLPLIKPQGRVVNVSSI 140

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 33/190 (17%)
Query: 46  LVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAK----TSDAKDPM 101
            +TG  SG G A A  +A  G ++  T    +EE+      E+  + +    T D +D  
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLT--GRREERLQALAGELSAKTRVLPLTLDVRDRA 82
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           A SA           VD +   +  +  L+NNA +       +  D +  +    TNI  
Sbjct: 83  AXSA----------AVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKG 132
Query: 162 HFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEAR--------------GLALQLVER 204
             + TR  L  +     G++I+N  SV   W  P +                L   L   
Sbjct: 133 LLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGT 192
Query: 205 GIRVNGVAPG 214
           G+RV  + PG
Sbjct: 193 GVRVTNLEPG 202

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 35/259 (13%)
Query: 37  SNKLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE--A 92
           S  L+GK  L+ G   +  I   +A      GA +AFTY     +K  +   E L    A
Sbjct: 26  SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVA 85
Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEE 149
              D  D  +I A          V + +   +GK+D LV+      K    G   +  E 
Sbjct: 86  GHCDVADAASIDA----------VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEA 135
Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT-----SVEPLWH---------SPEAR 195
                   +++S   ++R + + M +G +I+  T      V P ++             +
Sbjct: 136 NFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAALEASVK 195
Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE--VPMKRAGQPIEVAPCYV 253
            LA+ L  + IRVN ++ GPI T L  S   +       +E   P++R     EV    +
Sbjct: 196 YLAVDLGPQNIRVNAISAGPIKT-LAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGL 254
Query: 254 FLACNHCSSYITGQVLHPN 272
           +   +  S  +TG+V H +
Sbjct: 255 YF-LSDLSRSVTGEVHHAD 272

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 44  VALVTGGDSGIGRAVAH--CYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           VALVTGG+ GIG A+    C    G  V    + +++    Q  ++ L+    ++   P 
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVV----LTARDVTRGQAAVQQLQ----AEGLSPR 57
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
               D+   ++ + + D +   YG +D+LVNNA + +K         +  E   +TN F 
Sbjct: 58  FHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ-AEVTMKTNFFG 116
Query: 162 HFFMTRHSLRHMNEGSAIINTTSV 185
              +    L  +     ++N +S+
Sbjct: 117 TRDVCTELLPLIKPQGRVVNVSSI 140

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
           P+   + + A+VTGG+ GIG  +    +  G  V  T    ++     E +E L+ +   
Sbjct: 6   PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLT---CRDVTKGHEAVEKLKNSNHE 62
Query: 96  -------DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV 136
                  D  DP+A  + L          D +   +GK+DILVNNA V
Sbjct: 63  NVVFHQLDVTDPIATMSSLA---------DFIKTHFGKLDILVNNAGV 101

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 33  DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           +++P   L+GK  +VTG   GIGR +A+  +  GA V  T   ++ E+  Q+ +    E 
Sbjct: 1   EFRP-EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLT---ARSEEGLQKVVSRCLEL 56
Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
             + A        D+ F E   + + +     G +D+L+ N   Q  + S+   D   + 
Sbjct: 57  GAASAHYIAGTMEDMTFAE---QFIVKAGKLMGGLDMLILNHITQ-TSLSLFHDDIHSVR 112
Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS 184
           RV   N  S+  M+  +L  + + +  I   S
Sbjct: 113 RVMEVNFLSYVVMSTAALPMLKQSNGSIAVIS 144

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 33  DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           +++P   L+GK  +VTG   GIGR +A+  +  GA V  T   ++ E+  Q+ +    E 
Sbjct: 10  EFRP-EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLT---ARSEEGLQKVVSRCLEL 65
Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
             + A        D+ F E   + + +     G +D+L+ N   Q  + S+   D   + 
Sbjct: 66  GAASAHYIAGTMEDMTFAE---QFIVKAGKLMGGLDMLILNHITQ-TSLSLFHDDIHSVR 121
Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS 184
           RV   N  S+  M+  +L  + + +  I   S
Sbjct: 122 RVMEVNFLSYVVMSTAALPMLKQSNGSIAVIS 153

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           G+ A+VTGG SGIG A A  +A  GA +  + V        Q  LE           D  
Sbjct: 31  GRAAVVTGGASGIGLATATEFARRGARLVLSDVD-------QPALEQAVNGLRGQGFDAH 83
Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+   +   R+ DE     G +D++ +NA +   AG + +++ +    V   +++ 
Sbjct: 84  GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGI-VVAGPLAQMNHDDWRWVIDIDLWG 142

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 204 RGIRVNGVAPGPIWTPLIPSSFSE----EESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           RG+R+N VAPG + TPL+ +S ++    E + +F    P+ R  +P EVA    FL    
Sbjct: 174 RGVRLNVVAPGAVETPLLQASKADPRYGESTRRF--VAPLGRGSEPREVAEAIAFLLGPQ 231
Query: 260 CSSYITGQVL 269
            +S+I G VL
Sbjct: 232 -ASFIHGSVL 240

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	272
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-148
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-143
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-89
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-87
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-83
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-81
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-79
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	5e-75
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-74
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-73
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-73
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-73
1spx_A	278	Short-chain reductase family member (5L265); paral	5e-73
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-72
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-70
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-70
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-70
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-69
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	4e-69
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	8e-69
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-68
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-68
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-68
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	7e-68
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-68
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-67
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-67
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-67
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-67
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-67
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	6e-67
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	6e-67
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	7e-67
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-66
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-66
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-66
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	7e-66
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	8e-66
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	9e-66
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-65
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-65
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-65
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-65
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-65
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-65
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-65
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	5e-65
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-65
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-64
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	3e-64
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-64
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	7e-64
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	8e-64
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-63
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-63
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-63
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	8e-63
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	8e-63
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	8e-63
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-62
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-62
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-62
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-62
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	4e-62
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-62
3imf_A	257	Short chain dehydrogenase; structural genomics, in	6e-62
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-61
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-61
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-61
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-61
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	4e-61
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-61
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	7e-61
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	8e-61
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-60
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-60
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-60
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-60
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-60
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	9e-60
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	9e-60
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-59
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-59
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	5e-59
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	8e-59
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-58
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-58
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-58
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-58
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	6e-58
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	6e-58
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-57
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-57
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-57
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-57
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-56
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-56
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-56
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	7e-56
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	7e-56
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-55
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-55
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	5e-55
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-55
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	9e-54
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-53
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-53
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-53
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	6e-53
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	7e-53
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-52
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-52
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-52
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-52
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-52
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	4e-52
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	6e-52
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-51
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-51
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-51
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-51
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-51
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-51
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-51
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	5e-51
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	7e-51
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-50
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-50
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-50
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-49
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-49
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-49
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-49
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-49
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-49
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	9e-49
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-48
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-48
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-48
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	4e-48
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	8e-48
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-47
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-47
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	4e-46
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	5e-45
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	8e-45
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-44
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-44
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	8e-43
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-41
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-41
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-40
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-39
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	5e-39
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-38
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-38
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	4e-37
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-36
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-36
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-35
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-33
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-33
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-32
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-30
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	8e-32
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-28
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	5e-28
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-28
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	9e-28
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-27
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-27
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-26
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-26
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-25
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	7e-24
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	7e-24
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-23
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-23
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	6e-23
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-22
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	5e-21
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	5e-20
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	7e-19
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-18
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-18
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-17
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	2e-17
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	3e-17
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-17
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	5e-17
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	5e-17
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-16
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	2e-16
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	4e-16
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	7e-16
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-15
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	2e-15
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	5e-15
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	1e-11
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-11
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	3e-07
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  415 bits (1068), Expect = e-148
 Identities = 132/281 (46%), Positives = 175/281 (62%), Gaps = 21/281 (7%)

Query: 6   QQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALE 65
              P Q Q  QPG E +M P PQF   +YK S KL+GK  L+TGGDSGIGRAV+  +A E
Sbjct: 11  VTMPAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKE 70

Query: 66  GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYG 125
           GA +A  Y+   EE DA ET + + +         + +  DL  +++CK +V E V   G
Sbjct: 71  GANIAIAYLD--EEGDANETKQYVEKEG----VKCVLLPGDLSDEQHCKDIVQETVRQLG 124

Query: 126 KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV 185
            ++ILVNN A QY    +E I  E+LE+ FR NIFS+F +T+ +L H+ +G  IINT S+
Sbjct: 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI 184

Query: 186 EPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA 231
                +                 R L+  LV++GIRVNGVAPGPIWTPLIPSSF E++ +
Sbjct: 185 VAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVS 244

Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           QFGS VPM+R GQP E+AP YV+LA +  SSY+TGQ++H N
Sbjct: 245 QFGSNVPMQRPGQPYELAPAYVYLASS-DSSYVTGQMIHVN 284

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  403 bits (1037), Expect = e-143
 Identities = 107/281 (38%), Positives = 160/281 (56%), Gaps = 22/281 (7%)

Query: 7   QFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG 66
           ++P QKQ   PG +  M P P      Y  S +L+ + ALVTGGDSGIGRA A  YA EG
Sbjct: 15  EYPKQKQP-APGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREG 73

Query: 67  ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGK 126
           A VA  Y+ + EE+DAQ+   ++ E      +  + +  DL  +   + +V +   A G 
Sbjct: 74  ADVAINYLPA-EEEDAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHKAREALGG 128

Query: 127 IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE 186
           +DIL   A  Q     ++++  E+ ++ F  N+F+ F++T+ ++  + +G++II T+S++
Sbjct: 129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQ 188

Query: 187 PLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPL-IPSSFSEEESA 231
               SP               +RGLA Q+ E+GIRVN VAPGPIWT L I    ++++  
Sbjct: 189 AYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP 248

Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           QFG + PMKRAGQP E+AP YV+LA    SSY+T +V    
Sbjct: 249 QFGQQTPMKRAGQPAELAPVYVYLASQ-ESSYVTAEVHGVC 288

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  267 bits (684), Expect = 1e-89
 Identities = 73/280 (26%), Positives = 119/280 (42%), Gaps = 29/280 (10%)

Query: 18  GKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ 77
           G  H                 +  GK  ++TG  +GIGR+ A  +A EGA V  T     
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR--- 58

Query: 78  EEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ 137
            E   +ET + + +A    A+   A+ AD+        +++  +  +GKIDILVNNA   
Sbjct: 59  NEDRLEETKQQILKAGVP-AEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGAN 117

Query: 138 YKAGS-VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTS-VEPLWHSPEA 194
              G+   +   E  ++ F+ N  +   MT+ +  H+ +    I+N +S V         
Sbjct: 118 LADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGY 177

Query: 195 --------------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES--------AQ 232
                         R  A+ L++ G+RVN V+PG + T  + +    E +          
Sbjct: 178 PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS 237

Query: 233 FGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
               +P+   G+P E+A   VFLA  + SSYI GQ +  +
Sbjct: 238 RKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVAD 277

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  259 bits (664), Expect = 3e-87
 Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 23/250 (9%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +   +  +V G    IGRA A  +A EGA V  TY  + E   A   +  + +      
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAE--GAATAVAEIEKL----G 57

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
           +  +AI ADL      +  +    + +G+I  LV+ A       ++ E+DE    +V   
Sbjct: 58  RSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117

Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA---------------RGLALQLV 202
           N+ S F   + +L  M +G AI+  +S                         RGLA ++ 
Sbjct: 118 NLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG 177

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            + IRVN V PG I T    +    E   +      +KR G   +VA    FLA +  ++
Sbjct: 178 PK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDD-AA 235

Query: 263 YITGQVLHPN 272
           Y+TG     N
Sbjct: 236 YVTGACYDIN 245

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  250 bits (640), Expect = 2e-83
 Identities = 76/258 (29%), Positives = 115/258 (44%), Gaps = 29/258 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
              L+GK  L+TG   GIG A A  +A  GA V     K+    +  ET+  +R      
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPA--NIDETIASMRAD---- 55

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
             D    +ADL   E C+++VDE V  +G ID+L+NNA        + EID+   + V  
Sbjct: 56  GGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115

Query: 157 TNIFSHFFMTRHSLRHM-------NEGSAIINTTSVEPLWHSPE---------------A 194
            NI S    T+ +L H+        + SA+I+T S+                        
Sbjct: 116 ANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVH 175

Query: 195 RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF 254
           +       + G+R N V+PG + T       +++   +  + +PM R G   E+AP ++F
Sbjct: 176 KNWVDFHTKDGVRFNIVSPGTVDTAFHA-DKTQDVRDRISNGIPMGRFGTAEEMAPAFLF 234

Query: 255 LACNHCSSYITGQVLHPN 272
            A +  S YITGQVL  N
Sbjct: 235 FASHLASGYITGQVLDIN 252

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  245 bits (628), Expect = 1e-81
 Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 21/251 (8%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
             + L+ KV ++ GG   +G   A  +ALE   +   Y ++++   A +  + L E + +
Sbjct: 5   KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL-EDQGA 63

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
                    +DL  +E   ++ D     +GK+DI +N          + E  E   + + 
Sbjct: 64  KV---ALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGK-VLKKPIVETSEAEFDAMD 119

Query: 156 RTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP------------EA--RGLALQL 201
             N    +F  + + +HMN    II   +     ++             E   R  + +L
Sbjct: 120 TINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKEL 179

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
           +++ I VN +APGP+ T       ++E +A   S+    +  +  ++AP   FL  +   
Sbjct: 180 MKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD--G 237

Query: 262 SYITGQVLHPN 272
            +I GQ +  N
Sbjct: 238 WWINGQTIFAN 248

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  239 bits (612), Expect = 3e-79
 Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 33/261 (12%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
              L  KV +++G    +G  +A   A +GA +          +  ++  + + +     
Sbjct: 6   GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAART---VERLEDVAKQVTDT---- 58

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +  +++  D+  D     +VDE + AYG++D+++NNA              E +     
Sbjct: 59  GRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118

Query: 157 TNIFSHFFMTRHSLRHMNEGS-AIINTTSVEPLWHSPE--------------ARGLALQL 201
             +F    + +     + E   A++N  S+       +              ++ LA +L
Sbjct: 119 LTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATEL 178

Query: 202 VERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEVAPC 251
            E+GIRVN V PG IW   + S F           E+      +   +KR     EVA  
Sbjct: 179 GEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA 238

Query: 252 YVFLACNHCSSYITGQVLHPN 272
            +F+A +  +S ITGQ L  N
Sbjct: 239 ILFMASDL-ASGITGQALDVN 258

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  227 bits (581), Expect = 5e-75
 Identities = 26/249 (10%), Positives = 75/249 (30%), Gaps = 44/249 (17%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           +     +V GG   +G A+   +   G TV    + + +                  A  
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND-----------------QADS 43

Query: 100 PMAISADLGFDENCKRVVDEVVNA--YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
            + +  +  + E  + ++++  ++    ++D +   A       +  +   +  + + + 
Sbjct: 44  NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQ 103

Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQL-- 201
           +++S     + +  H+  G  +  T +   +  +P                  LA +   
Sbjct: 104 SVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSG 163

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
           +     V  + P  + TP+        +                  ++   +       S
Sbjct: 164 LPDNSAVLTIMPVTLDTPMNRKWMPNAD---------HSSWTPLSFISEHLLKWTTETSS 214

Query: 262 SYITGQVLH 270
              +G +L 
Sbjct: 215 RPSSGALLK 223

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  226 bits (578), Expect = 3e-74
 Identities = 68/252 (26%), Positives = 96/252 (38%), Gaps = 32/252 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
              +GK A+V GG  G+G A        GA V  T          +E  E          
Sbjct: 4   GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE--EFGPRV----- 56

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
               A+ +D+        +        G ID+L  NA V  +    +++ E   +R F  
Sbjct: 57  ---HALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGV-SELEPFDQVSEASYDRQFAV 112

Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
           N    FF  +     + EG +I+ T+SV      P               A  LA +L+ 
Sbjct: 113 NTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLP 172

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEES-----AQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           RGIRVN V+PG I TP    +   E           +  PMKR G   EVA   +FLA  
Sbjct: 173 RGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE 232

Query: 259 HCSSYITGQVLH 270
             +++ TG  L 
Sbjct: 233 --ATFTTGAKLA 242

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  225 bits (575), Expect = 1e-73
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
             +  GKV +VTGG  GIG  +   +   GA V        +E   +   + L  A    
Sbjct: 4   GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK---DESGGRALEQELPGA---- 56

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               + I  D+  +++ K +V E +  +G++D +VNNA         EE   +   ++  
Sbjct: 57  ----VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLE 112

Query: 157 TNIFSHFFMTRHSLRHMNEGS-AIINTTSVEPLWHSPEA--------------RGLALQL 201
            N+   + +T+ +L ++ +    +IN +S+       +A              + LAL  
Sbjct: 113 LNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDE 172

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
              G+RVN ++PG IWTPL     +          +     P+ R GQP EV    VFLA
Sbjct: 173 SPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA 232

Query: 257 CNHCSSYITGQVLH 270
               +++ TG  L 
Sbjct: 233 SE--ANFCTGIELL 244

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  224 bits (574), Expect = 2e-73
 Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 32/254 (12%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L  K+A++TG  SGIG A A  +  EGA V  T  +      A    EI   A    
Sbjct: 24  TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA--EIGGGA---- 77

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               + I AD        R+ ++V    G+ID+L  NA        + E+ EE+ +  F 
Sbjct: 78  ----VGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGG-GSMLPLGEVTEEQYDDTFD 132

Query: 157 TNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
            N+    F  + +L  +  GS+++ T S      +P               AR   L L 
Sbjct: 133 RNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLK 192

Query: 203 ERGIRVNGVAPGPIWTPLI------PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           +RGIR+N ++PGP  T  +           +       ++VPM R G+  EVA   +FLA
Sbjct: 193 DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLA 252

Query: 257 CNHCSSYITGQVLH 270
            +  SS++TG  L 
Sbjct: 253 SDD-SSFVTGAELF 265

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  223 bits (572), Expect = 3e-73
 Identities = 78/265 (29%), Positives = 121/265 (45%), Gaps = 27/265 (10%)

Query: 28  QFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLE 87
              + +    +     V LVTGG  GIG AV    A +G  V   Y  ++E   A   + 
Sbjct: 12  DLGTENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREA--ADAVVA 69

Query: 88  ILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID 147
            + E+   +A   +AI  D+G   +   +   V   +G++D LVNNA +      V+E+ 
Sbjct: 70  AITES-GGEA---VAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMS 125

Query: 148 EERLERVFRTNIFSHFFMTRHSLRHM-----NEGSAIINTTSVEPLWHSPEA-------- 194
            ER+ER+ R N+         ++R M      +G AI+N +S+  +  S           
Sbjct: 126 VERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK 185

Query: 195 -------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIE 247
                   GLA ++   GIRVN V PG I T L  S    + + +    VPM+RAG P E
Sbjct: 186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEE 245

Query: 248 VAPCYVFLACNHCSSYITGQVLHPN 272
           VA   ++L     +SY+TG +L+ +
Sbjct: 246 VADAILYLLSPS-ASYVTGSILNVS 269

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  224 bits (572), Expect = 5e-73
 Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 31/260 (11%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +   KVA++TG  +GIGRA A  +A EGA V  T       +  +ET + +  A  S  
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH---AERLEETRQQILAAGVS-E 57

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY---KAGSVEEIDEERLERV 154
           ++  ++ AD+  D     ++   +  +GK+DILVNNA       ++ +      E  +  
Sbjct: 58  QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDAT 117

Query: 155 FRTNIFSHFFMTRHSLRHMNEGS-AIINTTSVEPLWHSPE---------------ARGLA 198
              N+ S   +T+ ++ H++     I+N +S+    H+                  R  A
Sbjct: 118 LNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTA 177

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEES--------AQFGSEVPMKRAGQPIEVAP 250
           + L++ GIRVN ++PG + T    +    EE+        A     VP    GQP ++A 
Sbjct: 178 IDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAE 237

Query: 251 CYVFLACNHCSSYITGQVLH 270
              FLA    SSYI G  L 
Sbjct: 238 VIAFLADRKTSSYIIGHQLV 257

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  222 bits (567), Expect = 3e-72
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 31/260 (11%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +   K  ++TG  +GIGR  A  +A EGA V  T       +  +ET +I+ ++  S  
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS---SERLEETRQIILKSGVS-E 57

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG---SVEEIDEERLERV 154
           K   ++ AD+  ++   ++++  +  +GKID+LVNNA          +  +   +   + 
Sbjct: 58  KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT 117

Query: 155 FRTNIFSHFFMTRHSLRHMNEGS-AIINTTSVEPLWHS-PEA--------------RGLA 198
            + N+ +   MT+    H+      I+N +S+     + P+               R  A
Sbjct: 118 LKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTA 177

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEES--------AQFGSEVPMKRAGQPIEVAP 250
           + L + GIRVN V+PG + T    +    +++        A     +P+  AG+P  +A 
Sbjct: 178 IDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIAN 237

Query: 251 CYVFLACNHCSSYITGQVLH 270
             +FLA  + S YI GQ + 
Sbjct: 238 IILFLADRNLSFYILGQSIV 257

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  216 bits (552), Expect = 1e-70
 Identities = 29/250 (11%), Positives = 73/250 (29%), Gaps = 41/250 (16%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           +     +  LV GG   +G      +      VA   V   E ++A  ++ +        
Sbjct: 2   AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDV--VENEEASASVIV-------- 51

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                 ++       +        +    K+D ++  A       +  +   +  + +++
Sbjct: 52  -----KMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWK 106

Query: 157 TNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQL- 201
            +I++    +  + +H+ EG  +    +   L  +P                + LA +  
Sbjct: 107 QSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNS 166

Query: 202 -VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
            +  G     V P  + TP+   S  E                    +   +      + 
Sbjct: 167 GMPSGAAAIAVLPVTLDTPMNRKSMPEA---------DFSSWTPLEFLVETFHDWITGN- 216

Query: 261 SSYITGQVLH 270
               +G ++ 
Sbjct: 217 KRPNSGSLIQ 226

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  216 bits (552), Expect = 3e-70
 Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 25/258 (9%)

Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
            S   +    L  KVALVT    GIG A+A   A +GA V  +  K   +++   T+  L
Sbjct: 2   ASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK---QENVDRTVATL 58

Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
           +                +G  E+ +R+V   VN +G +DILV+NAAV    G++ +  EE
Sbjct: 59  QGE----GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEE 114

Query: 150 RLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE-------------- 193
             +++   N+ +   MT+  +  M    G +++  +SV      P               
Sbjct: 115 VWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGL 174

Query: 194 ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCY 252
            + LA++L  R IRVN +APG I T      + ++         + ++R G P + A   
Sbjct: 175 TKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIV 234

Query: 253 VFLACNHCSSYITGQVLH 270
            FL     +SYITG+ + 
Sbjct: 235 SFLCSED-ASYITGETVV 251

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  216 bits (553), Expect = 3e-70
 Identities = 76/268 (28%), Positives = 112/268 (41%), Gaps = 22/268 (8%)

Query: 19  KEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE 78
             H        T + Y  S     KVA+VTG   GIG A+A   A +G TV   Y     
Sbjct: 4   HHHHSSGVDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAA 63

Query: 79  EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY 138
              A+E    + EA    A   +   AD+      +R+      A+G +D+LVNNA +  
Sbjct: 64  A--AEEVAGKI-EAAGGKA---LTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGI-M 116

Query: 139 KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----- 193
              ++ E  +   +RV   N+   F   R + + +  G  IIN ++ +     P      
Sbjct: 117 PLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYA 176

Query: 194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQ 244
                       L+ +L  R I VN VAPGP  T L     S+E   +F    P++R G 
Sbjct: 177 AAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGT 236

Query: 245 PIEVAPCYVFLACNHCSSYITGQVLHPN 272
           P ++A    FLA     +++ GQVL  N
Sbjct: 237 PQDIAGAVAFLAGPD-GAWVNGQVLRAN 263

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  214 bits (547), Expect = 3e-69
 Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 39/260 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL G+VAL+TGG SG+GRA+   +  EGA VA             E L  L  A   +A 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKS-------AERLRELEVAHGGNA- 53

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL----ERV 154
             + +  D+   ++ KR  +  + A+GKID L+ NA +   + ++ ++ E+++    + +
Sbjct: 54  --VGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDI 111

Query: 155 FRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE--------------ARGLAL 199
           F  N+  +    +  L  +     +++ T S    + +                 R +A 
Sbjct: 112 FHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAF 171

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSF---------SEEESAQFGSEVPMKRAGQPIEVAP 250
           +L    +RVNGVAPG + T L   S          S   +    S +P+ R     E   
Sbjct: 172 ELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTG 230

Query: 251 CYVFLACNHCSSYITGQVLH 270
            YVF A    S   TG +L+
Sbjct: 231 AYVFFATRGDSLPATGALLN 250

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  213 bits (544), Expect = 4e-69
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 26/248 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GK A++TG  +GIG+ +A  +A  GA+V  + +       A   ++ +++       
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN---ADAANHVVDEIQQL----GG 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A   D+  ++    + D  ++  GK+DILVNNA          ++      R +  N
Sbjct: 61  QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGG--GPKPFDMPMADFRRAYELN 118

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +FS F +++     M +  G  I+  TS+     +                 R +A  L 
Sbjct: 119 VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG 178

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           E+ IRVNG+APG I T  + S  + E   +     P++R GQP ++A   +FL     +S
Sbjct: 179 EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA-AS 237

Query: 263 YITGQVLH 270
           +++GQ+L 
Sbjct: 238 WVSGQILT 245

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  212 bits (543), Expect = 8e-69
 Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 26/252 (10%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
              L GKV ++TG  +G+G+++A  +A E A V   Y   ++E  A   LE +++    +
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE--ANSVLEEIKKVG-GE 58

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
           A   +A+  D+  + +   +V   +  +GK+D+++NNA ++    S  E+      +V  
Sbjct: 59  A---IAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVID 114

Query: 157 TNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLAL 199
           TN+   F  +R ++++    +    +IN +SV      P                  LAL
Sbjct: 115 TNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLAL 174

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           +   +GIRVN + PG I TP+    F++ E  A   S +PM   G+P E+A    +LA +
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS 234

Query: 259 HCSSYITGQVLH 270
             +SY+TG  L 
Sbjct: 235 E-ASYVTGITLF 245

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  211 bits (539), Expect = 3e-68
 Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 38/258 (14%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            KVA+VTGG  GIGR ++   A +G  +A   +  QEE+ A ET++++  A     +  +
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQ-AAETIKLIEAA----DQKAV 56

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+    N    +DE     G  D+LVNNA +  +   + E+ EE L++++  N+FS
Sbjct: 57  FVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVNVFS 115

Query: 162 HFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA------------RGL----ALQLV 202
            FF  + + R          IIN  S+                     RGL    A +L 
Sbjct: 116 VFFGIQAASRKFDELGVKGKIINAASI--AAIQGFPILSAYSTTKFAVRGLTQAAAQELA 173

Query: 203 ERGIRVNGVAPGPIWTPL----------IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
            +G  VN  APG + T +          I      E   ++ S + + R   P +VA   
Sbjct: 174 PKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV 233

Query: 253 VFLACNHCSSYITGQVLH 270
            FLA  + S+Y+TGQV+ 
Sbjct: 234 SFLASEN-SNYVTGQVML 250

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  211 bits (540), Expect = 4e-68
 Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 22/248 (8%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
            + +  LVTGG SGIG+ VA      GA+V                ++ L     ++   
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN---PDKLAGAVQELEAL-GANGGA 64

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                 D+  ++   R VD V   +G++  +V+ A      G + ++D E   R    N+
Sbjct: 65  IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNV 124

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLALQLVE 203
               ++ +H+ R M    G + +  +S+                       +  A +L  
Sbjct: 125 NGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGA 184

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             +RVN + PG I T L+ +     E S+ +    P+ R G+  +VA   +FL  +  +S
Sbjct: 185 SWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDA-AS 243

Query: 263 YITGQVLH 270
           ++TGQV++
Sbjct: 244 FVTGQVIN 251

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  210 bits (537), Expect = 4e-68
 Identities = 66/248 (26%), Positives = 101/248 (40%), Gaps = 26/248 (10%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            +VA+VTG  SG G A+A  +   G  VA   +     +  +ET      A        +
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLS---AETLEETARTHWHAYADKV---L 55

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNA--AVQYKAGSVEEIDEERLERVFRTNI 159
            + AD+  + +    +   +  +G ID+LVNNA      +AG +     E+ ++V   N+
Sbjct: 56  RVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNV 115

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLALQLVE 203
              F   R  L HM       I+N  SV  L   P                + +A+    
Sbjct: 116 RGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAG 175

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            GIR N V PG I TP+      + E   Q  + +P K  G   +VA   +FLA    ++
Sbjct: 176 SGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGED-AT 234

Query: 263 YITGQVLH 270
           Y+ G  L 
Sbjct: 235 YVNGAALV 242

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  210 bits (536), Expect = 7e-68
 Identities = 80/254 (31%), Positives = 113/254 (44%), Gaps = 36/254 (14%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
               GK  LVTGG  GIGRA+A  +A EGA VA   ++ + ++ A+              
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI-----GG----- 51

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                   DL  +    R V+E   A G++D+LVNNAA+    GS   +      RV   
Sbjct: 52  ---AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEV 107

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLALQL 201
           N+ +   ++  + R M +  G AI+N  SV+ L+   E               R LAL L
Sbjct: 108 NLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDL 167

Query: 202 VERGIRVNGVAPGPIWTPLI-----PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
               IRVN VAPG I T  +      S   E     +     ++R G+P EVA   +FLA
Sbjct: 168 APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 227

Query: 257 CNHCSSYITGQVLH 270
               +S+ITG +L 
Sbjct: 228 SEK-ASFITGAILP 240

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  210 bits (536), Expect = 9e-68
 Identities = 81/260 (31%), Positives = 113/260 (43%), Gaps = 25/260 (9%)

Query: 26  TPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQET 85
           T          S  L GK A VTGG  GIG A+A   ALEGA VA TYV + E   AQ  
Sbjct: 15  TENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAER--AQAV 72

Query: 86  LEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE 145
           +  + E     A   +AI AD    E  ++ + E V A G +DILVN+A + + +  +EE
Sbjct: 73  VSEI-EQAGGRA---VAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGI-WHSAPLEE 127

Query: 146 IDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS-VEPLWHSPE----------- 193
                 + V   N  + F   R + RH+ +G  II   S +  L   P            
Sbjct: 128 TTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAAL 187

Query: 194 ---ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAP 250
               +GLA  L  RGI VN V PG   T + P+    + +      +     G+P ++A 
Sbjct: 188 AGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA--DGDHAEAQRERIATGSYGEPQDIAG 245

Query: 251 CYVFLACNHCSSYITGQVLH 270
              +LA      ++TG  L 
Sbjct: 246 LVAWLAGPQ-GKFVTGASLT 264

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  210 bits (536), Expect = 1e-67
 Identities = 79/264 (29%), Positives = 117/264 (44%), Gaps = 36/264 (13%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKT 94
              +L GKVALVTG   GIG AVA      GA V   Y  S ++  A++ + EI  +A  
Sbjct: 12  IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKD--AEKVVSEI--KALG 67

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
           SDA   +AI AD+       ++ D+ V  +G +DI V+N+ V    G ++++ EE  +RV
Sbjct: 68  SDA---IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRV 123

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA---------------RGLAL 199
           F  N    FF+ R + RH+ EG  I+ T+S      S                  R  + 
Sbjct: 124 FSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSK 183

Query: 200 QLVERGIRVNGVAPGPIWTPLIP-----------SSFSEEESAQFGSEVPMKRAGQPIEV 248
              ++ I VN VAPG   T +             S  +E+         P+ R G P +V
Sbjct: 184 DCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDV 243

Query: 249 APCYVFLACNHCSSYITGQVLHPN 272
           A    FL       ++ G+VL  +
Sbjct: 244 ANVVGFLVSKE-GEWVNGKVLTLD 266

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  209 bits (534), Expect = 2e-67
 Identities = 67/272 (24%), Positives = 110/272 (40%), Gaps = 38/272 (13%)

Query: 23  MEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA 82
           M  T         P+ +   +V L+TGG SG+GRA A   A EGA ++   V     +  
Sbjct: 1   MTATSS-------PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS---SEGL 50

Query: 83  QETL-EILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG 141
           + +   +L  A  ++    +   AD+  +   +  V      +G+ID   NNA ++ K  
Sbjct: 51  EASKAAVLETAPDAEV---LTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQN 107

Query: 142 SVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA----- 194
             E       ++V   N+   F      L+ M E     ++NT SV  +           
Sbjct: 108 PTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA 167

Query: 195 ---------RGLALQLVERGIRVNGVAPGPIWTPLI-------PSSFSEEESAQFGSEVP 238
                    R  A++    GIR+N +APG IWTP++             + + +F    P
Sbjct: 168 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP 227

Query: 239 MKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
            KR G+  E+A    FL  +  +SY+   V+ 
Sbjct: 228 SKRYGEAPEIAAVVAFLLSDD-ASYVNATVVP 258

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  209 bits (535), Expect = 2e-67
 Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 38/279 (13%)

Query: 23  MEPTPQFTSH-DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD 81
           M P+   TS      S  L GKVAL TG   GIGR +A      GA+V   Y  S +   
Sbjct: 1   MAPSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKA-- 58

Query: 82  AQETL-EILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA 140
           A+E + E+  +   +     +AI AD+        + D+ V+ +G +D +++N+ +    
Sbjct: 59  AEEVVAEL--KKLGAQG---VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM-EVW 112

Query: 141 GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA------ 194
               E+ +E  ++VF  N    FF+ +  L+H   G  II T+S+  +            
Sbjct: 113 CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAG 172

Query: 195 ---------RGLALQLVERGIRVNGVAPGPIWTPLIPS------------SFSEEESAQF 233
                    R  A+    +G+ VN +APG + T +                  E+     
Sbjct: 173 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL 232

Query: 234 GSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
            +  P+KR G P ++      L     S +I GQV+   
Sbjct: 233 ANMNPLKRIGYPADIGRAVSALCQEE-SEWINGQVIKLT 270

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  209 bits (534), Expect = 2e-67
 Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 36/258 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKTS 95
           S  L GKVAL+TG  SG G  +A  +A  GA V         +  A+    EI   A   
Sbjct: 4   SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEIGDAA--- 57

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
                +A++AD+  + +    V+  ++ +GK+DILVNNA + +K  + E ++ E  +R+ 
Sbjct: 58  -----LAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIV 112

Query: 156 RTNIFSHFFMTRHSLRHMNE------GSAIINTTSVEPLWHSPEA--------------R 195
             N+   + MT   + H  E         I+N  S       P                +
Sbjct: 113 GVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTK 172

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCY 252
            LA++L    IRV  + P    TPL+ +     SEE   +F   +PM R  +P ++A   
Sbjct: 173 ALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAA 232

Query: 253 VFLACNHCSSYITGQVLH 270
            FL     +S ITG  L 
Sbjct: 233 AFLCSPQ-ASMITGVALD 249

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  208 bits (532), Expect = 4e-67
 Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 35/259 (13%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            + GKVA++TG  SGIG A+A  +A EGA +     +        E    L+E       
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDR---LHEAARSLKEKFGVRV- 59

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + ++ D+   E    VV+ V +++G  DILVNNA       ++ E  +E+ +  +   
Sbjct: 60  --LEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTG-SNETIMEAADEKWQFYWELL 116

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           + +   + R  +  M    G AII+  S+  +                   ++ LA +++
Sbjct: 117 VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176

Query: 203 ERGIRVNGVAPGPIWTPLI-----------PSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
           +  IRVN + PG I TP                +     +      P+KR   P E+A  
Sbjct: 177 KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF 236

Query: 252 YVFLACNHCSSYITGQVLH 270
           +VFL     ++Y  G    
Sbjct: 237 FVFLCSER-ATYSVGSAYF 254

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  207 bits (529), Expect = 6e-67
 Identities = 72/252 (28%), Positives = 109/252 (43%), Gaps = 29/252 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           SN+L GKVA++TGG  GIG A+A  +  EGA V  T          ++  + +       
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH---SDVGEKAAKSVGTPDQI- 56

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                    D   ++   ++ D    A+G +  LVNNA +     SVEE       ++  
Sbjct: 57  ----QFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLA 111

Query: 157 TNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA--------------RGLAL 199
            N+   FF TR  ++ M     G++IIN +S+E     P                +  AL
Sbjct: 112 VNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAAL 171

Query: 200 QLVER--GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
               +   +RVN V PG I TPL+      EE+    ++ PM   G+P ++A   V+LA 
Sbjct: 172 DCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231

Query: 258 NHCSSYITGQVL 269
           N  S + TG   
Sbjct: 232 NE-SKFATGSEF 242

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  207 bits (529), Expect = 6e-67
 Identities = 62/254 (24%), Positives = 96/254 (37%), Gaps = 33/254 (12%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKV LVTG   GIG+++               V   E       L+ L+E          
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP-----LKKLKEKYGDRF---F 53

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+  D   K++V+  V  +GKID LV NA V     +V EID    ++++  N FS
Sbjct: 54  YVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFS 113

Query: 162 HFFMTRHSLRHMNEGS-AIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
              +   +L  + + +  ++  +S     +                 A  LA +  ER +
Sbjct: 114 IVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQV 171

Query: 207 RVNGVAPGPIWTPLI--------PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           +   VAPG + T +         PSS S E+   F       +       A  Y  LA +
Sbjct: 172 KAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALH 231

Query: 259 HCSSYITGQVLHPN 272
                + GQ L  N
Sbjct: 232 GIPDGVNGQYLSYN 245

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  207 bits (530), Expect = 7e-67
 Identities = 68/251 (27%), Positives = 102/251 (40%), Gaps = 27/251 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L  +VA+VTGG   IG A     A  GA V    +    E  A + +E LR        
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD---EAMATKAVEDLRME----GH 62

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           D  ++  D+   E+ +  V  V    G++DILV  A +       E++ + +  +    N
Sbjct: 63  DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDIN 122

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSV------EPLWHSPEA----------RGLALQ 200
           +   F   +   R M E     I+   S+       P   +             R LA +
Sbjct: 123 LNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAE 182

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
               GIR N VAP  I T L      + E    + +  PM R GQP EVA    FLA + 
Sbjct: 183 WAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDA 242

Query: 260 CSSYITGQVLH 270
            +S +TG +++
Sbjct: 243 -ASLMTGAIVN 252

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  206 bits (527), Expect = 1e-66
 Identities = 61/255 (23%), Positives = 98/255 (38%), Gaps = 44/255 (17%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
                 LVTGG  GIG+AV                  Q    + E L+            
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF--SAENLK------------ 47

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              I ADL   ++   V+D +       D +  NA +    GS+ +ID E +++V   N+
Sbjct: 48  --FIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGI-LIKGSIFDIDIESIKKVLDLNV 102

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA--------------RGLALQLVERG 205
           +S  +  +    ++  G++I+   S +     P +              + LAL L +  
Sbjct: 103 WSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQ 162

Query: 206 IRVNGVAPGPIWTPLI----------PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           IRVN V PG + T L                +E   Q   E P+ R  QP E+A   +FL
Sbjct: 163 IRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFL 222

Query: 256 ACNHCSSYITGQVLH 270
             +  S ++TG ++ 
Sbjct: 223 LSDK-SKFMTGGLIP 236

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  207 bits (530), Expect = 1e-66
 Identities = 82/286 (28%), Positives = 126/286 (44%), Gaps = 40/286 (13%)

Query: 15  AQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV 74
            QP  E   +  P         S  L GKVALVTG   GIGR +A      G  V   Y 
Sbjct: 5   TQPRGESKYDAIPGPLG---PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA 61

Query: 75  KSQEEKDAQETL-EILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNN 133
            S E   A+E +  I  +   SDA     + A++G  E+  R+ +E V  +GK+DI+ +N
Sbjct: 62  NSTES--AEEVVAAI--KKNGSDA---ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSN 114

Query: 134 AAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE 193
           + V    G V+++  E  +RVF  N    FF+ R + +H+  G  +I   S+     +  
Sbjct: 115 SGV-VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP 173

Query: 194 A---------------RGLALQLVERGIRVNGVAPGPIWTPLIPS------------SFS 226
                           R +A+ + ++ I VN VAPG I T +  +            S  
Sbjct: 174 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNE 233

Query: 227 EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           E +        P++R G PI++A    FLA N    ++TG+V+  +
Sbjct: 234 EVDEYAAVQWSPLRRVGLPIDIARVVCFLASND-GGWVTGKVIGID 278

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  207 bits (529), Expect = 2e-66
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 35/262 (13%)

Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EI 88
           T + Y  S  L  +V +VTGG SGIGRA A  +A  GA V    V    E  A     EI
Sbjct: 15  TENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN---EDAAVRVANEI 71

Query: 89  LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
             +A          +  D+   ++ + +V++    +G++D+LVNNA      G+V  I E
Sbjct: 72  GSKA--------FGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFG-TTGNVVTIPE 122

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA------------ 194
           E  +R+   N+   F  +++ +  M    G +IINTTS        +             
Sbjct: 123 ETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISS 182

Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIE 247
             R +A+   + GIRVN VAPG I +P     F+      +  + F +   M R G   E
Sbjct: 183 LTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEE 242

Query: 248 VAPCYVFLACNHCSSYITGQVL 269
           +A   +FLA +  S + TG +L
Sbjct: 243 IAEAMLFLASDR-SRFATGSIL 263

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  205 bits (523), Expect = 7e-66
 Identities = 70/265 (26%), Positives = 102/265 (38%), Gaps = 39/265 (14%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S K  GKV LVTG    IG A A   A EG  +A   +     +  ++    +RE     
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN---REALEKAEASVREK---- 54

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
             +  +   D+  +E     VD VV  +GKID L NNA  Q     V++   +   RV  
Sbjct: 55  GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114

Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLALQ 200
            N+   F + +   R M       I+NT S+  +   P                   AL 
Sbjct: 115 INVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALD 174

Query: 201 LVERGIRVNGVAPGPIWTPLI---------------PSSFSEEESAQFGSEVPMKRAGQP 245
           L    IRVN ++PG +    +                S+  +  + Q    VPM+R G  
Sbjct: 175 LAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 234

Query: 246 IEVAPCYVFLACNHCSSYITGQVLH 270
            E+     FL  +  SS++TG  L 
Sbjct: 235 NEIPGVVAFLLGDD-SSFMTGVNLP 258

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  205 bits (524), Expect = 8e-66
 Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 28/252 (11%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           ++L GK+A+VTG  SGIGRA A  +A EGA V  T           E  + +        
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN---GNALAELTDEIAGG----G 56

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
            +  A++ D+G +   + +V+  V  +G +D   NNA      G +  +  E       T
Sbjct: 57  GEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDT 116

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVE-PLWHSPEA--------------RGLALQ 200
           N+ S F   ++ +  +    G ++  T+S                         + LA++
Sbjct: 117 NLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVE 176

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           L  RGIRVN + PG   TP   ++    + E          +KR  +P E+A   ++LA 
Sbjct: 177 LGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLAS 236

Query: 258 NHCSSYITGQVL 269
           +  +S++TG  L
Sbjct: 237 DG-ASFVTGAAL 247

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  204 bits (522), Expect = 9e-66
 Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 25/250 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
            + K ALVTG   G+G+A A   A  G  +   Y +S++   A ET E + E        
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKA--ALETAEEI-EKLGVKV-- 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + + A++G     K +  ++   +G++D+ VNNAA       V E++E   +     N 
Sbjct: 57  -LVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS-GVLRPVMELEETHWDWTMNINA 114

Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            +  F  + + + M  N G  I++ +S+  + +                  R LA++L  
Sbjct: 115 KALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSP 174

Query: 204 RGIRVNGVAPGPIWTPLIPS-SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           + I VN V+ G I T  +      E+         P  R  +  ++     FL  +  + 
Sbjct: 175 KQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSK-AD 233

Query: 263 YITGQVLHPN 272
            I GQ +  +
Sbjct: 234 MIRGQTIIVD 243

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  205 bits (523), Expect = 1e-65
 Identities = 64/270 (23%), Positives = 102/270 (37%), Gaps = 45/270 (16%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
                   A++TGG   IG ++A     +G  V   Y  S+    AQ  +  L  A+   
Sbjct: 6   HEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA--AQRLVAELNAARAGS 63

Query: 97  AKDPMAISADLGFDE----NCKRVVDEVVNAYGKIDILVNNAAVQY----------KAGS 142
           A   +    DL         C+ ++D    A+G+ D+LVNNA+  Y             +
Sbjct: 64  A---VLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAA 120

Query: 143 VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSA-------IINTTSVEPLWHSPEA- 194
             +  + ++  +F +N  +  F+ R   R   EG A       ++N          P   
Sbjct: 121 DAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFC 180

Query: 195 -------------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKR 241
                        R  AL+L  R IRVN VAPG       P +  +E   ++  +VP+ +
Sbjct: 181 VYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL---PPAMPQETQEEYRRKVPLGQ 237

Query: 242 -AGQPIEVAPCYVFLACNHCSSYITGQVLH 270
                 ++A    FL     + YITG  L 
Sbjct: 238 SEASAAQIADAIAFLVSKD-AGYITGTTLK 266

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  204 bits (521), Expect = 1e-65
 Identities = 75/261 (28%), Positives = 105/261 (40%), Gaps = 41/261 (15%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKTSD 96
            +L GK AL+TG   GIGRA A  Y  EGATVA   +  +    A++   EI   A    
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIER---ARQAAAEIGPAA---- 56

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                A+  D+   ++    +   V   G +DILVNNAA+ +    + EI  E  E++F 
Sbjct: 57  ----YAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAAL-FDLAPIVEITRESYEKLFA 111

Query: 157 TNIFSHFFMTRHSLRHMNE---GSAIINTTSV-----EPLWHSPEA-----RGL----AL 199
            N+    F  + + R M     G  IIN  S      E L     A       L     L
Sbjct: 112 INVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGL 171

Query: 200 QLVERGIRVNGVAPGPIWTPL----------IPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
            L++  I VN +APG +                +    E+    G  VP  R G   ++ 
Sbjct: 172 DLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLT 231

Query: 250 PCYVFLACNHCSSYITGQVLH 270
              +FLA    S YI  Q  +
Sbjct: 232 GMAIFLASAE-SDYIVSQTYN 251

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  204 bits (522), Expect = 1e-65
 Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 28/251 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L  KVA++TG   GIG   +   A  GA V    +   E   A     + R A    
Sbjct: 6   TAELENKVAIITGACGGIGLETSRVLARAGARVVLADL--PETDLAGAAASVGRGA---- 59

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG-SVEEIDEERLERVF 155
               +    DL  + + + ++D  ++ +G++DI+ NNAA    A   V ++  +  +  F
Sbjct: 60  ----VHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTF 115

Query: 156 RTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLAL 199
             N      M ++++  +    G AI+N +S         +              R +A 
Sbjct: 116 TVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVAT 175

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           Q    G+R N +APG + TP +     +     F +     R G+P E+A    FLA + 
Sbjct: 176 QYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR 235

Query: 260 CSSYITGQVLH 270
            +++ITGQV+ 
Sbjct: 236 -AAFITGQVIA 245

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  204 bits (521), Expect = 2e-65
 Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 26/249 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GK AL+TG   GIG  +A  +A  GA +  +     E          L E   +D   
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSE---LDAARRALGEQFGTDV-- 72

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              ++ DL   +    +      A+G +D+LVNNA +      V + D +  +     N+
Sbjct: 73  -HTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNL 130

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
            +   +     + M     G AII   S   L   P+               + LA +L 
Sbjct: 131 RAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELG 190

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             GIR N V P  + T +    + +E  SA   + +P+ R   P EV+   V+LA +  +
Sbjct: 191 PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDA-A 249

Query: 262 SYITGQVLH 270
           S I G  + 
Sbjct: 250 SMINGVDIP 258

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  203 bits (520), Expect = 2e-65
 Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 30/268 (11%)

Query: 23  MEPTPQFTSHDYKPSNKLRGKVALVTGG-DSGIGRAVAHCYALEGATVAFTYVKSQEEKD 81
           +   P+           L+GKV LVT    +GIG   A    LEGA V  +      E+ 
Sbjct: 7   LSEAPKEID----GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH---ERR 59

Query: 82  AQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG 141
             ET + L +          A+  D+   E    ++ + V   G++D+LVNNA +     
Sbjct: 60  LGETRDQLADLGLGRV---EAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG-GQT 115

Query: 142 SVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE----- 193
            V ++ +E  +RV    + S    TR +LR+      G  I+N  SV             
Sbjct: 116 PVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYA 175

Query: 194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQ 244
                     R  A++ VE G+R+N V+P       +  + S E   +  S+    RA +
Sbjct: 176 AAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAE 235

Query: 245 PIEVAPCYVFLACNHCSSYITGQVLHPN 272
           P EVA    FLA ++ SSY+TG+V+  +
Sbjct: 236 PWEVAATIAFLASDY-SSYMTGEVVSVS 262

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  203 bits (518), Expect = 4e-65
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 27/250 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ KV +VTG  SGIGRA+A  +AL  + V    +    E    + ++ LR     +   
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL---EDRLNQIVQELRGMG-KEV-- 58

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + + AD+   ++ +  V      Y +ID+L NNA +      V E+ +E  ERV   N+
Sbjct: 59  -LGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLALQLVE 203
           +S F+ +R  +  M +     I+NT S+  +                    R +A    +
Sbjct: 118 YSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGD 177

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEES---AQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           +GIR   V PG + T +   S    E              R  +P ++A   VFLA +  
Sbjct: 178 QGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDE- 236

Query: 261 SSYITGQVLH 270
           +S++ G  + 
Sbjct: 237 ASFVNGDAVV 246

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  202 bits (517), Expect = 4e-65
 Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 23/249 (9%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S +   KV +VTG   GIG+A A   A EGA V    +     + A+   + +       
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN---AEAAEAVAKQIVAD---- 56

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY--KAGSVEEIDEERLERV 154
               ++++ D+   E+ K + D  +  +G ID LVNNAA+    K   +  ID E  ++ 
Sbjct: 57  GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKF 116

Query: 155 FRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-----------ARGLALQL 201
              N+    + TR   + M +  G AI+N +S     +S              + L+ +L
Sbjct: 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNYYGLAKVGINGLTQQLSREL 176

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             R IR+N +APGPI T    ++  +E        +P+ R G P ++    +FL  +  +
Sbjct: 177 GGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDE-A 235

Query: 262 SYITGQVLH 270
           S+ITGQ+ +
Sbjct: 236 SWITGQIFN 244

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  202 bits (517), Expect = 5e-65
 Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 31/256 (12%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKTS 95
           ++ L+GKVALVTG   GIGRA+A   A +GA VA  Y   +EE  A+ET+ EI  ++   
Sbjct: 2   NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE--AEETVYEI--QSNGG 57

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNA------YGKIDILVNNAAVQYKAGSVEEIDEE 149
            A    +I A+L      + +   + N         K DIL+NNA +      +EE  E+
Sbjct: 58  SA---FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQ 113

Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA--------------R 195
             +R+   N  + FF+ + +L  + + S IIN +S       P+                
Sbjct: 114 FFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTF 173

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVF 254
            LA QL  RGI VN + PG + T +     S+    Q+ + +    R G+  ++A    F
Sbjct: 174 TLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAF 233

Query: 255 LACNHCSSYITGQVLH 270
           LA    S ++TGQ++ 
Sbjct: 234 LASPD-SRWVTGQLID 248

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  202 bits (516), Expect = 6e-65
 Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 28/253 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L+ K+A++TGG +GIGRA+A  +A+EGA +A   +       A E    +R      
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP-----APEAEAAIRNL---- 52

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            +  + +  D+    + +    +V++ +G+ DILVNNA + Y     +E+  E+ ++ F 
Sbjct: 53  GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGI-YPLIPFDELTFEQWKKTFE 111

Query: 157 TNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQ 200
            N+ S F M +  +  M       IIN TS                        R LA  
Sbjct: 112 INVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASD 171

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVFLACNH 259
           L + GI VN +AP  + T    +S          + +  + R   P+++     FLA + 
Sbjct: 172 LGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD 231

Query: 260 CSSYITGQVLHPN 272
            +S+ITGQ L  +
Sbjct: 232 -ASFITGQTLAVD 243

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  202 bits (516), Expect = 1e-64
 Identities = 75/253 (29%), Positives = 112/253 (44%), Gaps = 31/253 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+G  ALVTGG  GIG A+    A  GA V         EK+  E LEI RE       +
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN---EKELDECLEIWREK----GLN 71

Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                 DL       +++  V + + GK++ILVNNA V       ++  E+    +  TN
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTN 130

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
             + + +++ +   +       +I  +S+      P                + LA +  
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190

Query: 203 ERGIRVNGVAPGPIWTPLI-----PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           +  IRVN VAPG I TPL+      +   +EE   F  + PM RAG+P EV+    FL  
Sbjct: 191 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCF 250

Query: 258 NHCSSYITGQVLH 270
              +SYITGQ++ 
Sbjct: 251 P-AASYITGQIIW 262

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  200 bits (512), Expect = 3e-64
 Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 26/248 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L   VA+VTG  +GIGRA+A  +A  GA+V  T +K    + A+     +R+A      
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK---SEGAEAVAAAIRQA----GG 61

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + +  ++  +++ + V+   ++ +GKI +LVNNA          ++     E  F+ N
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGG--GPKPFDMPMSDFEWAFKLN 119

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +FS F +++ +  HM +  G AI+N +S+     +                 R +A  + 
Sbjct: 120 LFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVG 179

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             GIRVN +APG I T  + +  + E         P+ R G+  ++A   +FL     ++
Sbjct: 180 PMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPA-AA 238

Query: 263 YITGQVLH 270
           +I+GQVL 
Sbjct: 239 WISGQVLT 246

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  200 bits (511), Expect = 4e-64
 Identities = 71/250 (28%), Positives = 103/250 (41%), Gaps = 30/250 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           N L GK  ++TGG  G+G   A      GA V    V   +E+ A    E+   A     
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADV--LDEEGAATARELGDAA----- 53

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                   D+  +E+ +RVV      +G +D LVNNA +      +E    ER  +V   
Sbjct: 54  ---RYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI-STGMFLETESVERFRKVVEI 109

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA----------RGL----ALQL 201
           N+   F   +  +  M +  G +I+N +S   L                RGL    A++L
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL 169

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAG-QPIEVAPCYVFLACNHC 260
               IRVN V PG  +TP+  +     +        PM R G +P E+A   V L  +  
Sbjct: 170 GTDRIRVNSVHPGMTYTPMT-AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT- 227

Query: 261 SSYITGQVLH 270
           SSY+TG  L 
Sbjct: 228 SSYVTGAELA 237

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  200 bits (510), Expect = 7e-64
 Identities = 62/255 (24%), Positives = 97/255 (38%), Gaps = 42/255 (16%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
               GKVALVTG   GIG AV       GA VA                           
Sbjct: 24  QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD--------------- 68

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              + +  DL        +   V    G++DI+VNNA V    G + E  +         
Sbjct: 69  ---LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVI-SRGRITETTDADWSLSLGV 124

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLALQL 201
           N+ + F + R ++  M    G AI+N  S   L   P                + + +  
Sbjct: 125 NVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDH 184

Query: 202 VERGIRVNGVAPGPIWTPLIPSSF------SEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
             +GIR+N V P  + TP++ + F       +   A+ G  VP+ R  +P ++A   +FL
Sbjct: 185 APQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFL 244

Query: 256 ACNHCSSYITGQVLH 270
           A +  + Y+ G ++ 
Sbjct: 245 ASDA-ARYLCGSLVE 258

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  199 bits (508), Expect = 8e-64
 Identities = 47/250 (18%), Positives = 79/250 (31%), Gaps = 36/250 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            +ALVT      G A       +G TV           DA E      E   + A     
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASF---ADAAERQRFESENPGTIALAE-- 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ--YKAGSVEEIDEERLERVFRTNIF 160
                   +  +R+VD  +     ID +V+N  +        +E   E  + ++F     
Sbjct: 57  --------QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSI 108

Query: 161 SHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLALQLVER 204
               + + ++  +    G+++I  TS                           A  L   
Sbjct: 109 FPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRD 168

Query: 205 GIRVNGVAPGPIWTP----LIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           GI +  + P     P          + E   +   +VP+ R G+P E+     FLA    
Sbjct: 169 GILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRR- 227

Query: 261 SSYITGQVLH 270
           ++ I GQ   
Sbjct: 228 AAPIVGQFFA 237

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  199 bits (509), Expect = 2e-63
 Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 34/258 (13%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
                VAL+TG  SGIGRA A   A +G TV           + +E  + +  A    A 
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRT---RTEVEEVADEIVGAG-GQA- 79

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             +A+ AD+  +   +  V ++V  +G +DI+V NA +      ++++     +     N
Sbjct: 80  --IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVN 137

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA----------------RGLALQ 200
           +   F     ++ ++ +  G AI+  +S+                         + LAL+
Sbjct: 138 LRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALE 197

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE--------VPMKRAGQPIEVAPCY 252
           L +  IRVN V PG I T +  ++    E               +   + G+  +VA   
Sbjct: 198 LGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELI 257

Query: 253 VFLACNHCSSYITGQVLH 270
            FL     + ++TG  + 
Sbjct: 258 RFLVSER-ARHVTGSPVW 274

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  197 bits (503), Expect = 4e-63
 Identities = 62/256 (24%), Positives = 100/256 (39%), Gaps = 42/256 (16%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR-EAKTSD 96
            +L GKV ++T    GIG+A A  +A EGA V  T +    E   QE  +    + +  D
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN---ESKLQELEKYPGIQTRVLD 58

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                               +D+  N   ++D+L N A      G+V + +E+  +    
Sbjct: 59  VTKKKQ--------------IDQFANEVERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMN 103

Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSVE-PLWHSPEA--------------RGLAL 199
            N+ S + M +  L  M   +   IIN +SV   +                    + +A 
Sbjct: 104 LNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA 163

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIEVAPCYVF 254
             +++GIR N V PG + TP +          EE    F       R     E+A   V+
Sbjct: 164 DFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVY 223

Query: 255 LACNHCSSYITGQVLH 270
           LA +  S+Y+TG  + 
Sbjct: 224 LASDE-SAYVTGNPVI 238

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  197 bits (504), Expect = 5e-63
 Identities = 61/254 (24%), Positives = 101/254 (39%), Gaps = 46/254 (18%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           + + KV ++TG   GIG  +   Y      V  T    +   D                 
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDI-------------- 70

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               ++ D+   E   R+V E +  +G+ID LVNNA V + A    E+ +E  +     N
Sbjct: 71  --HTVAGDISKPETADRIVREGIERFGRIDSLVNNAGV-FLAKPFVEMTQEDYDHNLGVN 127

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA------------------RGLA 198
           +   F +T+ +   M       I++ T+   L   P                    R LA
Sbjct: 128 VAGFFHITQRAAAEMLKQGSGHIVSITTS--LVDQPMVGMPSALASLTKGGLNAVTRSLA 185

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           ++    G+RVN V+PG I TP+ P     E  +      P+ R G+  +V    ++L   
Sbjct: 186 MEFSRSGVRVNAVSPGVIKTPMHP----AETHSTLAGLHPVGRMGEIRDVVDAVLYLE-- 239

Query: 259 HCSSYITGQVLHPN 272
             + +ITG++LH +
Sbjct: 240 -HAGFITGEILHVD 252

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  197 bits (503), Expect = 8e-63
 Identities = 61/258 (23%), Positives = 91/258 (35%), Gaps = 34/258 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L   VA+VTGG SGIG A        GA VAF        +  +     LR+        
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD---GERLRAAESALRQRFPGA--R 60

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A   D+      +   +      G   ILVNNA    +  +  E  +E      +   
Sbjct: 61  LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQG-RVSTFAETTDEAWSEELQLKF 119

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSV---EPLWHSPE-----------ARGLALQLVE 203
           FS     R  L  +     +AI+   S+   +P  H               R +A +   
Sbjct: 120 FSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAP 179

Query: 204 RGIRVNGVAPGPIWTPL-----------IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
           +G+RVNG+  G + +                            ++P+ R G+PIE A   
Sbjct: 180 KGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI 239

Query: 253 VFLACNHCSSYITGQVLH 270
           +FLA    S+Y TG  + 
Sbjct: 240 LFLASP-LSAYTTGSHID 256

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  197 bits (503), Expect = 8e-63
 Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 47/259 (18%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           + LR KV +VTG   GIGRA+A  +  EG+ V    +    E                  
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY--------------- 48

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                I  D+   +  K  +D +   YG I +LVNNA ++   G +E +      R+   
Sbjct: 49  ---DHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDV 104

Query: 158 NIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLALQL 201
           N+F +++ ++ ++ +M      +I+N +SV+    +  A              + +AL  
Sbjct: 105 NLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDY 164

Query: 202 VERGIRVNGVAPGPIWTPLI----------PSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
               +R N V P  I TPL+               E++ +++G E PM+R G+P EVA  
Sbjct: 165 A-PLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 223

Query: 252 YVFLACNHCSSYITGQVLH 270
             FLA    +S+ITG  L+
Sbjct: 224 VAFLASRE-ASFITGTCLY 241

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  198 bits (505), Expect = 8e-63
 Identities = 67/287 (23%), Positives = 110/287 (38%), Gaps = 49/287 (17%)

Query: 24  EPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQ 83
                 +S      + +    A+VTG    IGRA+A      G  V   Y  S E   A 
Sbjct: 5   HHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEA--AV 62

Query: 84  ETLEILREAKTSDAKDPMAISADL----GFDENCKRVVDEVVNAYGKIDILVNNAAVQYK 139
              + L + +++ A   +   ADL        +C+ +++    A+G+ D+LVNNA+  Y 
Sbjct: 63  SLADELNKERSNTA---VVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYP 119

Query: 140 AGSVEEIDEERL---------ERVFRTNIFSHFFMTRHSLRHMNEGSA--------IINT 182
              V+   E+             +  TN  + F +T    +     +         I+N 
Sbjct: 120 TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179

Query: 183 TSVEPLWHSPEA----------------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFS 226
                    P                  +  AL+L   GIRVNGVAPG       P +  
Sbjct: 180 CDAMVD--QPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLL---PVAMG 234

Query: 227 EEESAQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           EEE  ++  +VP+ +R     ++A   +FL     + YITG ++  +
Sbjct: 235 EEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS-AQYITGSIIKVD 280

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  196 bits (501), Expect = 2e-62
 Identities = 75/281 (26%), Positives = 118/281 (41%), Gaps = 42/281 (14%)

Query: 9   PPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGAT 68
             + Q   PG   V++    F          L GK AL+TG  +GIG+ VA  YA  GA 
Sbjct: 11  TLEAQTQGPGSMSVLD---LF---------DLSGKRALITGASTGIGKKVALAYAEAGAQ 58

Query: 69  VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKID 128
           VA     S      Q   + +           + I  D+   +  + ++D++    G ID
Sbjct: 59  VAVAARHSDA---LQVVADEIAGVG----GKALPIRCDVTQPDQVRGMLDQMTGELGGID 111

Query: 129 ILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSV 185
           I V NA +     ++ ++  E  +R+  TN+   F   + + R M     G  II T S+
Sbjct: 112 IAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASM 170

Query: 186 ------EPLWHSPEA----------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE 229
                  P   S             + +A++L    IRVN V+PG I T L       + 
Sbjct: 171 SGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL--VEPLADY 228

Query: 230 SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
            A +  ++P+ R G+P E+   Y++LA    SSY+TG  + 
Sbjct: 229 HALWEPKIPLGRMGRPEELTGLYLYLASAA-SSYMTGSDIV 268

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  196 bits (501), Expect = 2e-62
 Identities = 69/254 (27%), Positives = 100/254 (39%), Gaps = 36/254 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL-REAKTSDAK 98
           L GKVA+VTG  +GIG AVA   A EG  V    +       A      +   A      
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADID---GDAADAAATKIGCGA------ 77

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A   D+  ++    +VD  V A+G +D LV NA V     S+ +   E  +RV   N
Sbjct: 78  --AACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAIN 134

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
           +   +  T+H+   M E  G AI+N +S+                       R  A +L 
Sbjct: 135 LRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR 194

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFS------EEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
             GIR N + P  + TP+  ++ +          A+        R   P E+A   VFL 
Sbjct: 195 SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLL 254

Query: 257 CNHCSSYITGQVLH 270
            +  +S ITG    
Sbjct: 255 SDD-ASMITGTTQI 267

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  196 bits (500), Expect = 3e-62
 Identities = 74/267 (27%), Positives = 110/267 (41%), Gaps = 46/267 (17%)

Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
             H +    +   KVA+VTGG SGIG AV       GA V    +    EK      +  
Sbjct: 2   GHHHHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLD---EKSDVNVSD-- 56

Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
                           D+  +E  K  V++    YG+IDILVNNA ++ +   +     E
Sbjct: 57  ------------HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE-QYSPLHLTPTE 103

Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA------------- 194
              R+   N+   + M ++++  M      +IIN  SV+    +  A             
Sbjct: 104 IWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGL 163

Query: 195 -RGLALQLVERGIRVNGVAPGPIWTPLI----------PSSFSEEESAQFGSEVPMKRAG 243
            R +A+      IR N V PG I TP++            +  E +  ++G + PM R G
Sbjct: 164 TRSVAIDYA-PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIG 222

Query: 244 QPIEVAPCYVFLACNHCSSYITGQVLH 270
           +P EVA    FLA +  SS+ITG  L 
Sbjct: 223 RPEEVAEVVAFLASDR-SSFITGACLT 248

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  195 bits (499), Expect = 4e-62
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 26/246 (10%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +L GK  LVTG  SGIGRA    +A EGA++     +  E   A+    +  EA     
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE--ERLLAEAVAALEAEA----- 54

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              +A+ AD+   +  + V  E +  +G++  + + A V   +     +  E  E+V R 
Sbjct: 55  ---IAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV-AHSALSWNLPLEAWEKVLRV 110

Query: 158 NIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA-------------RGLALQLVER 204
           N+   F + R +   + EG +++ T SV  L     A             R LAL+L  +
Sbjct: 111 NLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARK 170

Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI 264
           G+RVN + PG I TP+  +        Q     P+ RAG+P EVA   +FL     S+YI
Sbjct: 171 GVRVNVLLPGLIQTPMT-AGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE-SAYI 228

Query: 265 TGQVLH 270
           TGQ L+
Sbjct: 229 TGQALY 234

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  195 bits (498), Expect = 4e-62
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 34/250 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S +L GKVALV+GG  G+G +       EGA V F  +   +E+      E+   A    
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI--LDEEGKAMAAELADAA---- 55

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                 +  D+      K  VD  V A+G + +LVNNA +    G++E+      +R+  
Sbjct: 56  ----RYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRILD 110

Query: 157 TNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA----------RGL----ALQ 200
            N+   F   R  ++ M E    +IIN +S+E L  +             RGL    AL+
Sbjct: 111 VNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALE 170

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L   GIRVN + PG + TP+       +   +   +  + RA +P+EV+   V+LA +  
Sbjct: 171 LGPSGIRVNSIHPGLVKTPMT------DWVPEDIFQTALGRAAEPVEVSNLVVYLASDE- 223

Query: 261 SSYITGQVLH 270
           SSY TG    
Sbjct: 224 SSYSTGAEFV 233

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  195 bits (497), Expect = 6e-62
 Identities = 62/257 (24%), Positives = 100/257 (38%), Gaps = 35/257 (13%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
               K  +VTGG+ GIG A     A  GA VA  Y  +    DA E  E + +      K
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA---ADAVEVTEKVGKEFGVKTK 67

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A   D+   +   + + ++    G I  L+ NA V        E+  E    V+  N
Sbjct: 68  ---AYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVN 123

Query: 159 IFSHFFMTRHSLRHMNE----GSAIINTTSV------EPLWHSPE--------------- 193
           +F  F   R   +   +    GS I+ T+S+      +   +                  
Sbjct: 124 VFGVFNTCRAVAKLWLQKQQKGS-IVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNL 182

Query: 194 ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            +GLA +    GIRVN ++PG + T    +   ++      S +P+ R  QP E+    +
Sbjct: 183 VKGLAAEWASAGIRVNALSPGYVNTDQT-AHMDKKIRDHQASNIPLNRFAQPEEMTGQAI 241

Query: 254 FLACNHCSSYITGQVLH 270
            L  +H ++Y+TG    
Sbjct: 242 LLLSDH-ATYMTGGEYF 257

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  195 bits (497), Expect = 6e-62
 Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 29/254 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           SN ++ KV ++TGG SG+G+ +A  +A EGA V  T    ++    +E    + +     
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK---LEEAKLEIEQF-PGQ 56

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               + +  D+   ++ +++++++   +G+IDIL+NNAA        E++       V  
Sbjct: 57  I---LTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGN-FICPAEDLSVNGWNSVIN 112

Query: 157 TNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLW------HSPEARG--------LAL 199
             +   F+ ++   ++         IIN  +           HS  A+         LA+
Sbjct: 113 IVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAV 172

Query: 200 QLVER-GIRVNGVAPGPIWTPLIPSSF--SEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           +   + GIRVN +APGPI           SEE + +    VP+ R G P E+A    +L 
Sbjct: 173 EWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLC 232

Query: 257 CNHCSSYITGQVLH 270
            +  ++YI G  + 
Sbjct: 233 SDE-AAYINGTCMT 245

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  195 bits (497), Expect = 2e-61
 Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 26/255 (10%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
               L+G+VA+VTGG +GIG+A+       G+ V     K +  K A +  E+      +
Sbjct: 12  APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD--ELQANLPPT 69

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
                + I  ++  +E    +V   ++ +GKI+ LVNN   Q      E I  +    V 
Sbjct: 70  KQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVL 128

Query: 156 RTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLW-------HSPEARG--------LA 198
            TN+   F+M +          G +I+N               HS  AR         LA
Sbjct: 129 ETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP--TKAGFPLAVHSGAARAGVYNLTKSLA 186

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           L+    GIR+N VAPG I++     ++    +        ++P KR G P EV+    FL
Sbjct: 187 LEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFL 246

Query: 256 ACNHCSSYITGQVLH 270
                +S+ITGQ + 
Sbjct: 247 LSPA-ASFITGQSVD 260

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  194 bits (495), Expect = 2e-61
 Identities = 71/253 (28%), Positives = 106/253 (41%), Gaps = 27/253 (10%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +    VA+VTGG  GIG  +A   A  G  +A T +   E       +  L        
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEG--VAPVIAELSGL----G 78

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV-QYKAGSVEEIDEERLERVFR 156
              + + ADL    + +  VD VV  +G+ID LVNNA +         ++  E  + +  
Sbjct: 79  ARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVG 138

Query: 157 TNIFSHFFMTRHSLRHMNEGSA-----IINTTSVEPLWHSPE--------------ARGL 197
            N+    F T+  L+ M    A     IIN TSV  +  SPE              ++GL
Sbjct: 139 VNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGL 198

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           AL+L E GI V  V PG I + +  +   + +       VPM+R G+P ++      LA 
Sbjct: 199 ALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAG 258

Query: 258 NHCSSYITGQVLH 270
                + TG V+ 
Sbjct: 259 GQ-FGFATGSVIQ 270

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  193 bits (494), Expect = 2e-61
 Identities = 66/261 (25%), Positives = 105/261 (40%), Gaps = 39/261 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L G+ A+VTGG  GIG A+A      GATVA   +       AQ  +  L         
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLD---VMAAQAVVAGLENGG----- 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A+  D+    +    + + ++A G  D+L  NA V        +I +E  +  F  N
Sbjct: 61  --FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGV-STMRPAVDITDEEWDFNFDVN 117

Query: 159 IFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------------ARGLALQL 201
               F   + + RH         I+NT S+     +P                + LA ++
Sbjct: 118 ARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREM 177

Query: 202 VERGIRVNGVAPGPIWTPL----------IPSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
             + IRVN V PG + T +          +     E   A++ S  P+ R  +P +VA  
Sbjct: 178 APKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADV 237

Query: 252 YVFLACNHCSSYITGQVLHPN 272
            VFLA +  + ++TGQ ++  
Sbjct: 238 VVFLASDA-ARFMTGQGINVT 257

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  193 bits (494), Expect = 3e-61
 Identities = 54/265 (20%), Positives = 92/265 (34%), Gaps = 26/265 (9%)

Query: 26  TPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQET 85
              F S   +      G++ALVTGG +G+GR +A   + EG +V  T  +          
Sbjct: 17  NLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDV---LDAA 73

Query: 86  LEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE 145
              +     +      A+  D+G  +    +   V   + ++D+LVNNA        +EE
Sbjct: 74  AGEIGGRTGNIV---RAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEE 130

Query: 146 IDEERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLWHSPEA------- 194
           +  E+   +   N+   F  T+H+ R M      G  IIN  S+      P +       
Sbjct: 131 VTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATK 190

Query: 195 -------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIE 247
                  +  AL      I    +  G   T +           Q   EV  +       
Sbjct: 191 HAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR--MSTGVLQANGEVAAEPTIPIEH 248

Query: 248 VAPCYVFLACNHCSSYITGQVLHPN 272
           +A   V++A    S+ +    +   
Sbjct: 249 IAEAVVYMASLPLSANVLTMTVMAT 273

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  192 bits (491), Expect = 4e-61
 Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 36/255 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTG   GIG+A+A     +G  VA        +  A+     + +A        +A
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN---DATAKAVASEINQA----GGHAVA 55

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           +  D+   +     V++     G  D++VNNA V   +  +E I  E +++V+  N+   
Sbjct: 56  VKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGV-APSTPIESITPEIVDKVYNINVKGV 114

Query: 163 FFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA----------RGL----ALQLVERG 205
            +  + ++        G  IIN  S      +PE           RGL    A  L   G
Sbjct: 115 IWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLG 174

Query: 206 IRVNGVAPGPIWTPL---IPSSFSE-------EESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           I VNG  PG + TP+   I    SE         +A+F   + + R  +P +VA C  +L
Sbjct: 175 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234

Query: 256 ACNHCSSYITGQVLH 270
           A    S Y+TGQ L 
Sbjct: 235 ASPD-SDYMTGQSLL 248

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  193 bits (493), Expect = 4e-61
 Identities = 65/272 (23%), Positives = 104/272 (38%), Gaps = 33/272 (12%)

Query: 24  EPTPQFTSHDYKPSNK-------LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS 76
           +P P     D  P+ +       LR KVA +TGG SGIG  +A  +   G          
Sbjct: 2   QPPPDVEGDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSL 61

Query: 77  QEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV 136
                       L  A        + +S D+         VD+ +  +G+IDIL+N AA 
Sbjct: 62  PR---VLTAARKLAGATGRRC---LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAG 115

Query: 137 QYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLW----- 189
            +       +     + V   +    F ++R        + G  I+N T+          
Sbjct: 116 NFLC-PAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ 174

Query: 190 -HSPEARG--------LALQLVERGIRVNGVAPGPIWTPLIPS--SFSEEESAQFGSEVP 238
            H+  A+         LA++   + IRVN +APGPI            +   +   +  P
Sbjct: 175 VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP 234

Query: 239 MKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
           ++R G   E+A   ++LA    +SY+TG VL 
Sbjct: 235 LQRLGNKTEIAHSVLYLASPL-ASYVTGAVLV 265

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  192 bits (491), Expect = 7e-61
 Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 31/262 (11%)

Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
           TS     +N+L+ KVA++TGG  GIG   A  +   GA V    +   ++   Q+    +
Sbjct: 4   TSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI--ADDH-GQKVCNNI 60

Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY-KAGSVEEIDE 148
                        +  D+  DE+ + +VD  +  +GK+DI+  N  V      S+ E   
Sbjct: 61  GSPDVI-----SFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGN 115

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL---WHSPEA--------- 194
           E  +RV   N++  F + +H+ R M      +I+ T S+                     
Sbjct: 116 EDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVL 175

Query: 195 ---RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ----FGSEVPMKRAGQPIE 247
                L  +L E GIRVN V+P  + +PL+   F  + S        +        +  +
Sbjct: 176 GLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED 235

Query: 248 VAPCYVFLACNHCSSYITGQVL 269
           VA    +LA +  S Y++G  L
Sbjct: 236 VADAVAYLAGDE-SKYVSGLNL 256

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  191 bits (489), Expect = 8e-61
 Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 33/254 (12%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           +N+L+GKVALVTGG SG+G  V      EGA VAF+ +   E    Q   E+   +    
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI--NEAAGQQLAAELGERS---- 54

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               M +  D+  + +   V+  V    G +++LVNNA +    G +E    E   R+ +
Sbjct: 55  ----MFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI-LLPGDMETGRLEDFSRLLK 109

Query: 157 TNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPEA--------------RGLALQL 201
            N  S F   +  +  M E G +IIN  SV       +               R  AL  
Sbjct: 110 INTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSC 169

Query: 202 VERG--IRVNGVAPGPIWTPLI----PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
            ++G  IRVN + P  I+TP++    P   S+E            RA  P  +A   +FL
Sbjct: 170 RKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFL 229

Query: 256 ACNHCSSYITGQVL 269
           A +  SS ++G  L
Sbjct: 230 ASDE-SSVMSGSEL 242

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  191 bits (487), Expect = 1e-60
 Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 34/258 (13%)

Query: 32  HDYKPSNK-LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EIL 89
            DY    + L+G+V LVTG   GIG A A  YA  GA+V         E    E   +I 
Sbjct: 3   FDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT---EASLAEVSDQI- 58

Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
            ++        +A++ +    +  + +   V + +G++D L++NA++      +E++ +E
Sbjct: 59  -KSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDE 117

Query: 150 RLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE-------------- 193
              +V   N+ + F +TR  L  +  +E ++I  T+S                       
Sbjct: 118 DFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGL 177

Query: 194 ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
            + LA +L     +R N + PG   T +         +  +  E P+     P ++ P Y
Sbjct: 178 MQTLADELEGVTAVRANSINPGATRTGMR--------AQAYPDENPLNNPA-PEDIMPVY 228

Query: 253 VFLACNHCSSYITGQVLH 270
           ++L     S+ I GQ L+
Sbjct: 229 LYLMGPD-STGINGQALN 245

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  191 bits (488), Expect = 1e-60
 Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 30/252 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G  ALVTGG  GIG  +    A  GA+V         +K+  + L   R         
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRSK----GFK 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             A   DL      + +++ V N + GK++ILVNNA +       ++   E    +   N
Sbjct: 60  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSIN 118

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
             + + ++  +   +       ++  +SV      P                R LA +  
Sbjct: 119 FEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA 178

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV----PMKRAGQPIEVAPCYVFLACN 258
           +  IRVNGV PG I T L+  +  + E  +  +++     ++R G+P E+A    FL C 
Sbjct: 179 KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFL-CF 237

Query: 259 HCSSYITGQVLH 270
             +SY+TGQ+++
Sbjct: 238 PAASYVTGQIIY 249

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  192 bits (491), Expect = 1e-60
 Identities = 59/282 (20%), Positives = 112/282 (39%), Gaps = 39/282 (13%)

Query: 8   FPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGA 67
              Q +   P ++ ++ P            N  +GKVA +TGG +G+G+ +    +  GA
Sbjct: 4   EALQSKFFSPLQKAMLPP------------NSFQGKVAFITGGGTGLGKGMTTLLSSLGA 51

Query: 68  TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKI 127
                  K   +   + T E +     +      AI  D+   +  +  V E++   G  
Sbjct: 52  QCVIASRK--MDV-LKATAEQISSQTGNKV---HAIQCDVRDPDMVQNTVSELIKVAGHP 105

Query: 128 DILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTS 184
           +I++NNAA  + +   E +     + +    +    F+T    + +    +G+A ++ T+
Sbjct: 106 NIVINNAAGNFIS-PTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT 164

Query: 185 VEPLW------HSPEARG--------LALQLVERGIRVNGVAPGPIWTPLIPSSF--SEE 228
           +           S  A+         LA +  + G+R N + PGPI T    S    +  
Sbjct: 165 IYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT 224

Query: 229 ESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
              +    +P  R G   E+A    FL  ++ +S+I G V+ 
Sbjct: 225 FEKEMIGRIPCGRLGTVEELANLAAFLCSDY-ASWINGAVIK 265

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  192 bits (489), Expect = 2e-60
 Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 45/287 (15%)

Query: 5   NQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYAL 64
           N++  P   +A    ++V++    F          L+GKVA VTG   GIG AVA  YA 
Sbjct: 9   NKELGPLPTKAPTLSKNVLD---LF---------SLKGKVASVTGSSGGIGWAVAEAYAQ 56

Query: 65  EGATVAFTYVKSQEEKDAQETLEIL-REAKTSDAKDPMAISADLGFDENCKRVVDEVVNA 123
            GA VA  Y     ++ A+   +     +K        A   ++   ++ +  + +    
Sbjct: 57  AGADVAIWYNSHPADEKAEHLQKTYGVHSK--------AYKCNISDPKSVEETISQQEKD 108

Query: 124 YGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAI 179
           +G ID+ V NA V   +   ++  + +   ++   ++   ++ + +  +   +   GS +
Sbjct: 109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGS-L 167

Query: 180 INTTSV------EPLWHSPEA----------RGLALQLVERGIRVNGVAPGPIWTPLIPS 223
           I T+S+       P   +P            + LA++      RVN ++PG I T +   
Sbjct: 168 IITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDIT-D 225

Query: 224 SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
             S++  A++    P+ R G   E+   Y++LA N  S++ TG  + 
Sbjct: 226 FASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNA-STFTTGSDVV 271

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  191 bits (487), Expect = 2e-60
 Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 28/249 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ K  LVTGG  GIG A+   +A  GA +         E +  E L   ++        
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN---EYELNECLSKWQKK----GFQ 64

Query: 100 PMAISADLGFDENCKRVVDEVVNAYG-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                 D       ++++  V + +G K+DIL+NN     ++    +   E       TN
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTN 123

Query: 159 IFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------------ARGLALQL 201
           + S + +++ +   +     G+ II  +S+  +  +                AR LA + 
Sbjct: 124 LESAYHLSQLAHPLLKASGCGN-IIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEW 182

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              GIR N VAP  I TPL  + + +E      S  P+ R G+P EV+    FL     +
Sbjct: 183 ASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMP-AA 241

Query: 262 SYITGQVLH 270
           SYITGQ + 
Sbjct: 242 SYITGQTIC 250

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  189 bits (482), Expect = 9e-60
 Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 36/257 (14%)

Query: 33  DYKP-SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE 91
            Y+P  + L  ++ LVTG   GIGR  A  YA  GATV         E+  ++    + E
Sbjct: 2   HYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRN---EEKLRQVASHINE 58

Query: 92  AKTSDAKDPMAISADLGF--DENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
                 + P     DL     ENC+++   +   Y ++D +++NA +      + E + +
Sbjct: 59  E---TGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQ 115

Query: 150 RLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSV-----EPLW-------HSPEA- 194
             + V + N+ + F +T+  L  +  ++  +++ T+S         W        + E  
Sbjct: 116 VWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGM 175

Query: 195 -RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            + LA +  ++ +RVN + PG   T +  S+F  E           ++   P ++ P Y+
Sbjct: 176 MQVLADEY-QQRLRVNCINPGGTRTAMRASAFPTE---------DPQKLKTPADIMPLYL 225

Query: 254 FLACNHCSSYITGQVLH 270
           +L  +  S   TG    
Sbjct: 226 WLMGDD-SRRKTGMTFD 241

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  189 bits (481), Expect = 9e-60
 Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 44/256 (17%)

Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL 89
            S    P      K  LV GG   +G  V   +  +         +     D        
Sbjct: 10  HSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH------- 62

Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
                       + +     +E  K V++++ +   K+D  V  A       +  +   +
Sbjct: 63  ------------SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLK 110

Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------AR 195
            ++ +   N++S F       + +N+G   + T +   L  +                 +
Sbjct: 111 SVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIK 170

Query: 196 GLALQL--VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            LA +   +  G    G+ P  + TP      S+   A F    P+    + +       
Sbjct: 171 DLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD---ANFDDWTPLSEVAEKL------F 221

Query: 254 FLACNHCSSYITGQVL 269
             + N  S    G ++
Sbjct: 222 EWSTNSDSRPTNGSLV 237

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  189 bits (482), Expect = 1e-59
 Identities = 38/248 (15%), Positives = 78/248 (31%), Gaps = 37/248 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L     L+TG    +G   A      G  V  +Y          E    LR+A      
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS--VTE----LRQAGA---- 73

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             +A+  D   +      +D +      +  +V+NA+           + +   R+F  +
Sbjct: 74  --VALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLA--ETPGEEADNFTRMFSVH 129

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
           + + + +  H    +  +E + I++ +       S +                  A +  
Sbjct: 130 MLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA 189

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
              ++VNG+AP  +              A   ++  +        +     +L     S+
Sbjct: 190 PL-VKVNGIAPALLMFQP---KDDAAYRANALAKSALGIEPGAEVIYQSLRYLL---DST 242

Query: 263 YITGQVLH 270
           Y+TG  L 
Sbjct: 243 YVTGTTLT 250

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  190 bits (484), Expect = 1e-59
 Identities = 53/281 (18%), Positives = 94/281 (33%), Gaps = 56/281 (19%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE---------EKDAQETLEI 88
            +++ KV LVTGG  G GR+ A   A EGA +    +              +D +E    
Sbjct: 6   GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE 65

Query: 89  LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
           + +      +       D+       R +   V  +GK+D++V NA +         +  
Sbjct: 66  VEKT----GRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI---CPLGAHLPV 118

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV-----------EPLWHSPE---- 193
           +     F  +          +L ++  G++II T SV                 P     
Sbjct: 119 QAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGY 178

Query: 194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLI----------PSSFSEEESAQF 233
                        LA QL  + IR N + P  + T ++          P   +   +   
Sbjct: 179 SYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADAL 238

Query: 234 GSEVPMKRAG----QPIEVAPCYVFLACNHCSSYITGQVLH 270
            +   M+       +  +++    FLA +  S Y+TG    
Sbjct: 239 LAFPAMQAMPTPYVEASDISNAVCFLASDE-SRYVTGLQFK 278

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  188 bits (480), Expect = 2e-59
 Identities = 56/249 (22%), Positives = 94/249 (37%), Gaps = 35/249 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+  LVTG   GIGR         GA V         + D    +      +      
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVRECPGIE------ 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +  DLG D       +  + + G +D+LVNNAAV        E+ +E  +R F  N+
Sbjct: 56  --PVCVDLG-DWE---ATERALGSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNL 108

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
            +   +++   R +       AI+N +S                        + +AL+L 
Sbjct: 109 RAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG 168

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              IRVN V P  + T +  +++S+   +    + +P+ +  +   V    +FL  +  S
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR-S 227

Query: 262 SYITGQVLH 270
              TG  L 
Sbjct: 228 GMTTGSTLP 236

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  187 bits (478), Expect = 5e-59
 Identities = 76/263 (28%), Positives = 117/263 (44%), Gaps = 43/263 (16%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+GK ALVTG  +GIG+A+A     EGA V     + +E     ET++ +R A+  DA 
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLING-RREEN--VNETIKEIR-AQYPDAI 62

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               + ADLG ++ C+ V+++    Y K+DIL+NN  + ++     +I +E   ++F  N
Sbjct: 63  -LQPVVADLGTEQGCQDVIEK----YPKVDILINNLGI-FEPVEYFDIPDEDWFKLFEVN 116

Query: 159 IFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQL 201
           I S   +TR  L+ M    EG  +I   S   +  S E              +R LA   
Sbjct: 117 IMSGVRLTRSYLKKMIERKEGR-VIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELT 175

Query: 202 VERGIRVNGVAPGPIWTPLI----------PSSFSEEESAQFGSE----VPMKRAGQPIE 247
               + VN + PG   T  +               EE   +F  E      ++R  +P E
Sbjct: 176 TGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEE 235

Query: 248 VAPCYVFLACNHCSSYITGQVLH 270
           +A    FL+    SS I G  L 
Sbjct: 236 IAHLVTFLSSPL-SSAINGSALR 257

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  187 bits (477), Expect = 8e-59
 Identities = 70/253 (27%), Positives = 108/253 (42%), Gaps = 31/253 (12%)

Query: 39  KLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
            L+GKV +VTG  G  G+G   A   A  GA VA TY    +   A+E ++ L +     
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQG--AEENVKELEKTYGIK 74

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
           AK   A    +   E+C+++V +VV  +G+ID  + NA        + +   E    V +
Sbjct: 75  AK---AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGAT-ADSGILDGSVEAWNHVVQ 130

Query: 157 TNIFSHFFMTRHSLRHMNE---GSAIINTTSV------EPLWHSPEA----------RGL 197
            ++   F   +    H  E   GS ++ T S+       P   +             R L
Sbjct: 131 VDLNGTFHCAKAVGHHFKERGTGS-LVITASMSGHIANFPQEQTSYNVAKAGCIHMARSL 189

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           A +  +   RVN ++PG I T L      +E    + S +PM R G   E+   YV+ A 
Sbjct: 190 ANEWRDF-ARVNSISPGYIDTGLS-DFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFAS 247

Query: 258 NHCSSYITGQVLH 270
           +  S+Y TG  L 
Sbjct: 248 DA-STYTTGADLL 259

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  187 bits (476), Expect = 1e-58
 Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 45/262 (17%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           ++ + GKVALVTG   GIGRA A    L+GA VA        E   Q    +  + +   
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW--NLEAGVQCKAALHEQFEPQK 59

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               + I  D+   +  +    +VV+ +G++DILVNNA V          +E+  E+  +
Sbjct: 60  T---LFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQ 107

Query: 157 TNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSPE----------------AR 195
            N+ S    T   L +M++     G  IIN +S+  L    +                + 
Sbjct: 108 INLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSA 167

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLI-------PSSFSEEESAQFGSEVPMKRAGQPIEV 248
            LA  L+  G+R+N + PG + T ++             E        +       P  +
Sbjct: 168 ALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLI 227

Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A   + L  +     + G ++ 
Sbjct: 228 ANGLITLIED---DALNGAIMK 246

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  185 bits (473), Expect = 2e-58
 Identities = 68/258 (26%), Positives = 104/258 (40%), Gaps = 34/258 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVA+VTG  SGIG  +A   A +GA +         E   ++    L          
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAE--IEKVRAGLAAQHGVKV-- 57

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   ADL   E  + +VD  V   G+IDILVNNA +Q+ A  +E+   E+ + +   N+
Sbjct: 58  -LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNL 115

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            + F  T  +L HM +     IIN  S   L  S                 +  AL+   
Sbjct: 116 SAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAG 175

Query: 204 RGIRVNGVAPGPIWTPLI-----------PSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
           +GI  N + PG + TPL+                         + P  +   P ++    
Sbjct: 176 QGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA 235

Query: 253 VFLACNHCSSYITGQVLH 270
           VFL  +  ++ ITG  + 
Sbjct: 236 VFL-ASDAAAQITGTTVS 252

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  185 bits (472), Expect = 3e-58
 Identities = 71/257 (27%), Positives = 104/257 (40%), Gaps = 31/257 (12%)

Query: 33  DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           DY+   +L G  A VTG  SGIG  +   +A  GA +     ++     A + L      
Sbjct: 2   DYRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----- 56

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
               A     I AD+   E       E   A   + ILVN+A +  +     E D+    
Sbjct: 57  ----AAVAARIVADVTDAEAMTAAAAEAE-AVAPVSILVNSAGIA-RLHDALETDDATWR 110

Query: 153 RVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSV------EPLWHSPEA---------- 194
           +V   N+   F+ +R   R M      AI+N  S+       P + S             
Sbjct: 111 QVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLT 170

Query: 195 RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYV 253
           R LA +   RG+RVN +APG + T +        E    +    PM R G+P E+A   +
Sbjct: 171 RALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAAL 230

Query: 254 FLACNHCSSYITGQVLH 270
           FLA    +SY+TG +L 
Sbjct: 231 FLASPA-ASYVTGAILA 246

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  185 bits (472), Expect = 3e-58
 Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 34/257 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           ++GK+A+VT G SG+G A A   A  GA +      S+  +  +     +    +     
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLF---SRNREKLEAAASRIASLVS--GAQ 59

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              ++ D+    +  R+ ++     G  DILV +     + G   E+  E  +  +R   
Sbjct: 60  VDIVAGDIREPGDIDRLFEKAR-DLGGADILVYSTGG-PRPGRFMELGVEDWDESYRLLA 117

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSV---EPLW---HSPEAR--------GLALQLVE 203
            S  ++ R +   M E     ++   SV    P      S   R         LAL+L  
Sbjct: 118 RSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAP 177

Query: 204 RGIRVNGVAPGPIWTPLIPSSFS----------EEESAQFGSEVPMKRAGQPIEVAPCYV 253
            G+ VN V P  I T  + S             EE      S +PM R G+P E+A    
Sbjct: 178 HGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVA 237

Query: 254 FLACNHCSSYITGQVLH 270
           FLA    +S+ITG V+ 
Sbjct: 238 FLASEK-ASFITGAVIP 253

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  185 bits (471), Expect = 6e-58
 Identities = 53/251 (21%), Positives = 86/251 (34%), Gaps = 31/251 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L GK   +TG   GIG A+A   A +GA VA     +        T+     A  +   
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             +A+  D+  ++  +  V   V+ +G IDILVNNA+         +   +R + + + N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVN 121

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSV---EPLWHSPEA-------------RGLALQ 200
               F   +  L H+       I+         P W                   GLA +
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181

Query: 201 LVERGIRVNGVAPGP-IWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
              +G+ +N + P   I T  I               V      +P  +A     +    
Sbjct: 182 FGPQGVAINALWPRTVIATDAI----------NMLPGVDAAACRRPEIMADAAHAVLTRE 231

Query: 260 CSSYITGQVLH 270
            ++   GQ L 
Sbjct: 232 -AAGFHGQFLI 241

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  184 bits (469), Expect = 6e-58
 Identities = 55/249 (22%), Positives = 96/249 (38%), Gaps = 35/249 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
             G  ALVTG   GIGR         GA V           D     +     +      
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDLVSLAKECPGIE------ 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +  DLG D +     ++ +   G +D+LVNNAA+        E+ +E  +R F  N+
Sbjct: 56  --PVCVDLG-DWD---ATEKALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNL 108

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
            S F +++   R M       +I+N +S+      P                + +A++L 
Sbjct: 109 RSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 168

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              IRVN V P  + T +     ++ E + +     P+++  +  +V    +FL  +  S
Sbjct: 169 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR-S 227

Query: 262 SYITGQVLH 270
           +  +G  + 
Sbjct: 228 ASTSGGGIL 236

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  184 bits (469), Expect = 2e-57
 Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 34/262 (12%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
               +  K A++TG  SGIG A+A   A  GA +      + +E   +   + +    + 
Sbjct: 19  YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDE--IRTVTDEVAGLSSG 76

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
                +   AD+        ++  V + +G  DILVNNA VQ+    +E+   E+ +R+ 
Sbjct: 77  TV---LHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVE-KIEDFPVEQWDRII 132

Query: 156 RTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLAL 199
             N+ S F   R ++  M +     IIN  S   L  SP                + +AL
Sbjct: 133 AVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVAL 192

Query: 200 QLVERGIRVNGVAPGPIWTPLI-----------PSSFSEEESAQFGSEVPMKRAGQPIEV 248
           ++ E G+ VN + PG + TPL+             +  +  +       P K+     +V
Sbjct: 193 EVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQV 252

Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A   ++L     ++ ITG  + 
Sbjct: 253 ASLALYL-AGDDAAQITGTHVS 273

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  183 bits (466), Expect = 2e-57
 Identities = 54/259 (20%), Positives = 93/259 (35%), Gaps = 48/259 (18%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
              GK   VTG   GIG A A  +   GA V        +E                   
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----------------QY 46

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                  D+       +V   ++    ++D LVN A +  + G+ +++ +E  ++ F  N
Sbjct: 47  PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGIL-RMGATDQLSKEDWQQTFAVN 105

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA----------------RGLALQ 200
           +   F + + ++       G AI+   S     H+P                    + L+
Sbjct: 106 VGGAFNLFQQTMNQFRRQRGGAIVTVASD--AAHTPRIGMSAYGASKAALKSLALSVGLE 163

Query: 201 LVERGIRVNGVAPGPIWTPL---------IPSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
           L   G+R N V+PG   T +                    QF   +P+ +  +P E+A  
Sbjct: 164 LAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANT 223

Query: 252 YVFLACNHCSSYITGQVLH 270
            +FLA +  +S+IT Q + 
Sbjct: 224 ILFLASDL-ASHITLQDIV 241

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  184 bits (468), Expect = 2e-57
 Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 27/252 (10%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
            S  LRGK   ++GG  GIG A+A   A +GA VA     ++       T+    +    
Sbjct: 3   GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE 62

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
                + I  D+   +     V + V  +G IDI VNNA+     GS+EE+  +R + + 
Sbjct: 63  AGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMN 121

Query: 156 RTNIFSHFFMTRHSLRHM--NEGSAIINTTSV---EPLWHSPEA------------RGLA 198
              +   + +++  + HM   +   I+  +     EP W  P               G+A
Sbjct: 122 GIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIA 181

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            +L + GI  N + P            +       G +  M R+ +P   A     +   
Sbjct: 182 EELRDAGIASNTLWPRTTVA-------TAAVQNLLGGDEAMARSRKPEVYADAAYVVL-- 232

Query: 259 HCSSYITGQVLH 270
           +  S  TG  L 
Sbjct: 233 NKPSSYTGNTLL 244

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  182 bits (464), Expect = 4e-57
 Identities = 49/253 (19%), Positives = 76/253 (30%), Gaps = 37/253 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
             A+VT      G   A   +  G TVA         K   E                  
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDES---FKQKDELEAFAETYPQLKPMSE-- 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
                   +    +++ V +AYG++D+LV+N     +   +++   E             
Sbjct: 57  --------QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRP 108

Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
           F +       M   +   II  TS  P     E              A  L+ +L E  I
Sbjct: 109 FALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNI 168

Query: 207 RVNGVAPGPIWTP-------LIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
            V  + P  + +          P   + E  A       ++R G   E+     FLA   
Sbjct: 169 PVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS 228

Query: 260 CSSYITGQVLHPN 272
              Y+TGQV    
Sbjct: 229 -CDYLTGQVFWLA 240

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  181 bits (462), Expect = 1e-56
 Identities = 59/255 (23%), Positives = 99/255 (38%), Gaps = 38/255 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L+G+  +VTGG  GIGR +A  +A  GA VA     + +       +  L +  +    
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTAD---IDACVADLDQLGSGKV- 62

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + +  D+     C  +    V  +G ID++  NA V +    +  +  E+L  +F  N
Sbjct: 63  --IGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV-FPDAPLATMTPEQLNGIFAVN 119

Query: 159 IFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEARG------------------- 196
           +   F+  +  L  +     G  ++ T+S+     +    G                   
Sbjct: 120 VNGTFYAVQACLDALIASGSGR-VVLTSSI-----TGPITGYPGWSHYGATKAAQLGFMR 173

Query: 197 -LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
             A++L    I VN + PG I T  +     EE  A     +P    G P ++     FL
Sbjct: 174 TAAIELAPHKITVNAIMPGNIMTEGL-LENGEEYIASMARSIPAGALGTPEDIGHLAAFL 232

Query: 256 ACNHCSSYITGQVLH 270
           A    + YITGQ + 
Sbjct: 233 ATKE-AGYITGQAIA 246

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  181 bits (461), Expect = 1e-56
 Identities = 60/257 (23%), Positives = 92/257 (35%), Gaps = 37/257 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GK ALVTG  SGIG  +A   A  GA +           D    L  +          
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGF-----GDPAPALAEIARH----GVK 52

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   ADL      + +       +G +DILVNNA +Q     VE+   E  +++   N+
Sbjct: 53  AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNL 111

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            + F  TR +L  M       IIN  SV  L  S                 + + L+   
Sbjct: 112 SAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETAT 171

Query: 204 RGIRVNGVAPGPIWTPLI----------PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
             +  N + PG + TPL+               + +      + P      P  +    +
Sbjct: 172 SNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVL 231

Query: 254 FLACNHCSSYITGQVLH 270
           FL C+   S + G   +
Sbjct: 232 FL-CSEAGSQVRGAAWN 247

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  181 bits (462), Expect = 2e-56
 Identities = 62/287 (21%), Positives = 97/287 (33%), Gaps = 64/287 (22%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
                 VALVTG    +GR++A     EG  V   Y +S  E  A      L   + + A
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE--ANALSATLNARRPNSA 62

Query: 98  KDPMAISADLG-----------------FDENCKRVVDEVVNAYGKIDILVNNAAVQYKA 140
              + + ADL                      C  +V      +G+ D+LVNNA+  +  
Sbjct: 63  ---ITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS-FYP 118

Query: 141 GSVEEIDEE--------------RLERVFRTNIFSHFFMTRHSLRHM--------NEGSA 178
             +   DE+                  +F +N  + +F+ +     +            +
Sbjct: 119 TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYS 178

Query: 179 IINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS 224
           IIN                           R  AL+L    IRVNGV PG     ++   
Sbjct: 179 IINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS---VLVDD 235

Query: 225 FSEEESAQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
                     S+VP+ +R     EV+   +FL  +  + YITG  + 
Sbjct: 236 MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK-AKYITGTCVK 281

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  180 bits (460), Expect = 3e-56
 Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 32/253 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G++ALVTGG  GIG+ +A      GA V      ++   D    L    +        
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDC------- 79

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             AI ADL  +   +R+   +     ++DILVNNA   + A ++E       E+V + N+
Sbjct: 80  -QAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGA-ALESYPVSGWEKVMQLNV 137

Query: 160 FSHFFMTRHSLRHM------NEGSAIINTTSVEPLWHSPE---------------ARGLA 198
            S F   +  L  +         + +IN  SV  +    E               +R LA
Sbjct: 138 TSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLA 197

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +LV   I VN +APG   + +     ++ +      + +PM R G+P E+A   + LA 
Sbjct: 198 KELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLA- 256

Query: 258 NHCSSYITGQVLH 270
               +Y+TG V+ 
Sbjct: 257 GTAGAYMTGNVIP 269

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  179 bits (457), Expect = 7e-56
 Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 36/256 (14%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL-EILREAKTSD 96
           +K   K+A+VTG  SG+GRAVA   A  G  VA    +       QET  EI  +A    
Sbjct: 24  SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDA---LQETAAEIGDDA---- 76

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               + +  D+   ++ + +    V  +G++D+L NNA     A  +E++   + ++V  
Sbjct: 77  ----LCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132

Query: 157 TNIFSHFFMTRHSLRHM----NEGSAIINTTSVEPLWHSPEA----------------RG 196
           TN+   F  T+ + R M      G  IIN  S+     SP                  + 
Sbjct: 133 TNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSI--SATSPRPYSAPYTATKHAITGLTKS 190

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
            +L      I    +  G   TP+      +    Q    + ++       VA   V++A
Sbjct: 191 TSLDGRVHDIACGQIDIGNADTPMAQK--MKAGVPQADLSIKVEPVMDVAHVASAVVYMA 248

Query: 257 CNHCSSYITGQVLHPN 272
                + +    +   
Sbjct: 249 SLPLDANVQFMTIMAT 264

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  178 bits (455), Expect = 7e-56
 Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 29/251 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L GK ALVTG   GIG+A+A   A +GATV  + +    E        I ++A    
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN--AEGAKAAAASIGKKA---- 54

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                AI+AD+    + K +  E+    G IDILVNNA++     + +++D +   ++  
Sbjct: 55  ----RAIAADISDPGSVKALFAEIQALTGGIDILVNNASI-VPFVAWDDVDLDHWRKIID 109

Query: 157 TNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSP-EA-------------RGLAL 199
            N+   F +TR     M    +   +I+  S      +P  A             R LA 
Sbjct: 110 VNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALAT 169

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           +L +  I  N V PG I +  + +S   E          MK  GQP  +A    FLA + 
Sbjct: 170 ELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD 229

Query: 260 CSSYITGQVLH 270
            + +ITGQ L+
Sbjct: 230 -ARWITGQTLN 239

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  179 bits (456), Expect = 1e-55
 Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 42/270 (15%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE----------EKDAQETL 86
           + KL G+VA +TG   G GRA A   A EGA +    +  +             D  ET+
Sbjct: 6   AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65

Query: 87  EILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEI 146
            ++  A     +  +A   D    +  ++VVD+ V A G++DI+V NA V     + ++I
Sbjct: 66  RLVEAA----NRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGV-AAPQAWDDI 120

Query: 147 DEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE---------- 193
             E    V   N+   +         + E   G +II  +S   +   P           
Sbjct: 121 TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHA 180

Query: 194 ----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---------SEEESAQFGSEVPMK 240
               AR  A +L +  IRVN V PGP+ TP+              +  + +   +     
Sbjct: 181 VTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240

Query: 241 RAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
              +P ++A    +LA +  S  +T   + 
Sbjct: 241 WVAEPEDIADTVCWLASDE-SRKVTAAQIP 269

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  179 bits (457), Expect = 3e-55
 Identities = 62/287 (21%), Positives = 97/287 (33%), Gaps = 64/287 (22%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
                 VALVTG    +GR++A     EG  V   Y +S  E  A      L   + + A
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE--ANALSATLNARRPNSA 99

Query: 98  KDPMAISADLG-----------------FDENCKRVVDEVVNAYGKIDILVNNAAVQYKA 140
              + + ADL                      C  +V      +G+ D+LVNNA+  +  
Sbjct: 100 ---ITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS-FYP 155

Query: 141 GSVEEIDEE--------------RLERVFRTNIFSHFFMTRHSLRHM--------NEGSA 178
             +   DE+                  +F +N  + +F+ +     +            +
Sbjct: 156 TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYS 215

Query: 179 IINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS 224
           IIN                           R  AL+L    IRVNGV PG     ++   
Sbjct: 216 IINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS---VLVDD 272

Query: 225 FSEEESAQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
                     S+VP+ +R     EV+   +FL  +  + YITG  + 
Sbjct: 273 MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK-AKYITGTCVK 318

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  177 bits (452), Expect = 5e-55
 Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 34/253 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           LRG+VALVTGG  G+G  +A   A  G +V       +E   A E  + L E    +   
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEE---ASEAAQKLTEKYGVET-- 73

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            MA   D+   E  K++++ V   +GK+D +VN A +  +    EE   +   +V   N+
Sbjct: 74  -MAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNL 131

Query: 160 FSHFFMTRHSLRHMNEGSA--IINTTSVEPLWHSPEA-------------------RGLA 198
           F  +++ R +   + E     IIN  S+       E                    + LA
Sbjct: 132 FGTYYVCREAFSLLRESDNPSIINIGSL----TVEEVTMPNISAYAASKGGVASLTKALA 187

Query: 199 LQLVERGIRVNGVAPGPIWTPL-IPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +    GIRVN +APG   T +        E+       +P+ R G P ++    VFLA 
Sbjct: 188 KEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLA- 246

Query: 258 NHCSSYITGQVLH 270
           +  + Y+TGQ++ 
Sbjct: 247 SEEAKYVTGQIIF 259

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  178 bits (453), Expect = 6e-55
 Identities = 68/283 (24%), Positives = 110/283 (38%), Gaps = 41/283 (14%)

Query: 11  QKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVA 70
           + Q   PG   V+E          K    L  +  LVTGG  GIGR +A  +A  GA VA
Sbjct: 13  EAQTQGPGSMLVVESAEPAER---KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVA 69

Query: 71  FTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDIL 130
                 +E          L E    +      +  D+    +C      VV+A+G +D++
Sbjct: 70  VAARSPRE---LSSVTAELGELGAGNVI---GVRLDVSDPGSCADAARTVVDAFGALDVV 123

Query: 131 VNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEP 187
             NA + +    ++ +  E+L  V   N+    +  +  L  +     G  +I T+S+  
Sbjct: 124 CANAGI-FPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGR-VILTSSI-- 179

Query: 188 LWHSPEARG--------------------LALQLVERGIRVNGVAPGPIWTPLIPSSFSE 227
              +    G                     A++L  RG+ VN + PG I T  +     E
Sbjct: 180 ---TGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL-VDMGE 235

Query: 228 EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
           E  +     +PM   G P+++     FLA +  + YITGQ + 
Sbjct: 236 EYISGMARSIPMGMLGSPVDIGHLAAFLATDE-AGYITGQAIV 277

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  174 bits (443), Expect = 9e-54
 Identities = 67/259 (25%), Positives = 109/259 (42%), Gaps = 35/259 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
            N+LR  +ALVTG  SGIGRAV+   A EGATVA   +     ++    L      +   
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKI-DILVNNAAVQYKAGSVEEIDEERLERVF 155
             +  A  AD+      + ++++V   + +   ++V+ A +  +   +  + E+  ++V 
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKVI 120

Query: 156 RTNIFSHFFMTRHSLRHM----NEGSAIINTTSVEPLWHSPEARG--------------- 196
             N+   F +T+ + + +      GS IIN +S+          G               
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGS-IINISSIVGK------VGNVGQTNYAASKAGVI 173

Query: 197 -----LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
                 A +L   GIR N V PG I TP+      ++   +    +PM   G P +VA  
Sbjct: 174 GLTQTAARELGRHGIRCNSVLPGFIATPMT-QKVPQKVVDKITEMIPMGHLGDPEDVADV 232

Query: 252 YVFLACNHCSSYITGQVLH 270
             FLA    S YITG  + 
Sbjct: 233 VAFLASED-SGYITGTSVE 250

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  174 bits (443), Expect = 2e-53
 Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 47/273 (17%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE---------EKDAQETLEIL 89
           K+ GKVA +TG   G GR+ A   A EGA +    V  Q            D  ET+  +
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84

Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
                   +  +A   D+   +  +  VD+ V   G++DI++ NAA+  +   +  +D +
Sbjct: 85  EAL----GRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPK 140

Query: 150 RLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE------------- 193
               +   N+   +   R ++ H+     G +I+ T+S+  L  +               
Sbjct: 141 TWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHG 200

Query: 194 -ARGLALQLVERGIRVNGVAPGPIWTPLI---------------PSSFSEEESAQFGSEV 237
             R +AL+L  R IRVN V P  + TP++               P+    + +++    +
Sbjct: 201 LMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL 260

Query: 238 PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
           P+    +P +++   +FL  +  + YITG  L 
Sbjct: 261 PIPY-VEPADISNAILFLVSDD-ARYITGVSLP 291

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  171 bits (437), Expect = 3e-53
 Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 37/247 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           + ALVTGG  GIGRA+A      G  VA      +E   +   +                
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV---------------P 47

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           +  DL   ++ K +V   + A G + +LV+ AAV        E+  E   RV   ++   
Sbjct: 48  LPTDLE-KDDPKGLVKRALEALGGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVA 105

Query: 163 FFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA----------------RGLALQLVER 204
           F + + +  HM E     ++   SV                         R LA +    
Sbjct: 106 FLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARL 165

Query: 205 GIRVNGVAPGPIWTPLI-PSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           GIRVN + PG + T    P   + E      + +PM R  +P E+A     L  +  + Y
Sbjct: 166 GIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDE-AEY 224

Query: 264 ITGQVLH 270
           +TGQ + 
Sbjct: 225 LTGQAVA 231

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  172 bits (439), Expect = 6e-53
 Identities = 64/279 (22%), Positives = 109/279 (39%), Gaps = 51/279 (18%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE-------------EKDAQ 83
           + ++ GKVA VTG   G GR+ A   A EGA +    +                  +D  
Sbjct: 6   TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLA 65

Query: 84  ETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSV 143
           ET ++++       +  +    D+   +  K  VD  V   G++DI+V NA +     ++
Sbjct: 66  ETADLVKGH----NRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTL 121

Query: 144 EEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA------ 194
           ++  EE    +   N+   +   +  + HM     G +II T+SV  L   P        
Sbjct: 122 DKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAA 181

Query: 195 --------RGLALQLVERGIRVNGVAPGPIWTPLI---------------PSSFSEEESA 231
                   R   ++L +  IRVN V P  + TP++               P         
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC 241

Query: 232 QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
           Q    +P+    +PI+++   +F A +  + YITG  L 
Sbjct: 242 QMFHTLPIPW-VEPIDISNAVLFFASDE-ARYITGVTLP 278

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  171 bits (436), Expect = 7e-53
 Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 27/251 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+GK A+VTG   G+G+A+A      GA +      +        T E  + A      
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTS--LDATAEEFKAAGI---- 55

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           + +    D+   E+ + +V   ++A+G+IDILVNNA +  +   + ++ E+  + V  TN
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT-RDTLMLKMSEKDWDDVLNTN 114

Query: 159 IFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQL 201
           + S +  T+   + M     G  IIN TS+  +  +                 + +A + 
Sbjct: 115 LKSAYLCTKAVSKIMLKQKSGK-IINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEF 173

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             +GI  N VAPG I T +      ++    + + +P+KR G P EVA    FLA +  S
Sbjct: 174 AAKGIYCNAVAPGIIKTDMT-DVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD-S 231

Query: 262 SYITGQVLHPN 272
           +YITGQV++ +
Sbjct: 232 NYITGQVINID 242

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  171 bits (435), Expect = 1e-52
 Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 29/250 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL-REAKTSDAK 98
           L GK ALVTG   G+G A A   A  GA V    +++    ++ +TL     +A      
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA------ 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               ++ D+  +   +    ++      +DIL+NNA +Q     + E++ E  ++V  TN
Sbjct: 61  --HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTN 117

Query: 159 IFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA--------------RGLALQL 201
           + S F ++R + + M   N G  IIN  S+      P                  +A + 
Sbjct: 118 LTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEW 177

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
            +  I+ N + PG I T +  +   +++  +   S  P +R G+P E+    +FL+ +  
Sbjct: 178 AQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLS-SKA 236

Query: 261 SSYITGQVLH 270
           S YI GQ+++
Sbjct: 237 SDYINGQIIY 246

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  170 bits (434), Expect = 2e-52
 Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 29/252 (11%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
               + AL+T G  G+G+ V      +G +V  TY         +   E  ++ +     
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTA--METMKETYKDVEE---- 57

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFRT 157
               + AD+   E+  ++V+E ++ +GKID L+NNA    ++   + + +E+    + + 
Sbjct: 58  RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQG 117

Query: 158 NIFSHFFMTRHSLRHM---NEGSAIIN--TTSVEPLWHSPE--------------ARGLA 198
           N+ + F + +  +  M   N G  IIN      +                      + +A
Sbjct: 118 NLTAVFHLLKLVVPVMRKQNFGR-IINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVA 176

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            +  E GI  N V PG I   +   +  +E         P+ R+G   ++A    FL  +
Sbjct: 177 YEEAEYGITANMVCPGDIIGEMK-EATIQEARQLKEHNTPIGRSGTGEDIARTISFLCED 235

Query: 259 HCSSYITGQVLH 270
             S  ITG ++ 
Sbjct: 236 D-SDMITGTIIE 246

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  171 bits (435), Expect = 2e-52
 Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 41/267 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE----------EKDAQETLEI 88
            L+G+VA +TG   G GR+ A   A EGA +    + +             +D  ET  +
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 89  LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
           + +      +  +    D+  D   + +V + +  +G++D++V NA V    G V E+ +
Sbjct: 72  VEDQ----GRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTD 126

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE------------ 193
           E+ + V   N+   +   R ++  M E   G +I+  +S   L  +P             
Sbjct: 127 EQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLT 186

Query: 194 --ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--------EEESAQFGSEVPMKRAG 243
                LA++L E GIRVN + P  + TP+I                 +     V      
Sbjct: 187 ALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFM 246

Query: 244 QPIEVAPCYVFLACNHCSSYITGQVLH 270
              EVA    +LA +  S  +TG  + 
Sbjct: 247 TADEVADVVAWLAGDG-SGTLTGTQIP 272

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  170 bits (432), Expect = 2e-52
 Identities = 72/248 (29%), Positives = 106/248 (42%), Gaps = 42/248 (16%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           +R K  LV     GIGRAVA   + EGA V                 E+L+ +       
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICA----------RNEELLKRSGHR---- 62

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +  DL      ++ +D +     ++DILV NA    KAG  +E+  E  +    +  
Sbjct: 63  --YVVCDL------RKDLDLLFEKVKEVDILVLNAGG-PKAGFFDELTNEDFKEAIDSLF 113

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSV---EP---LWHSPEAR--------GLALQLV 202
            +   + R+ L  M E   G  I+  TS     P   L+ S  AR         L+ ++ 
Sbjct: 114 LNMIKIVRNYLPAMKEKGWGR-IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA 172

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             GI VN VAPG   T  +    SEE+  Q  S++PM+R  +P E+A    FL     +S
Sbjct: 173 PYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK-AS 231

Query: 263 YITGQVLH 270
           Y+TGQ + 
Sbjct: 232 YLTGQTIV 239

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  170 bits (433), Expect = 3e-52
 Identities = 50/257 (19%), Positives = 89/257 (34%), Gaps = 33/257 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           + G+V +VTG   GIGR +A      GATV  T          +   +  +         
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRH---LDTLRVVAQEAQSL----GGQ 55

Query: 100 PMAISADLGFDENCKRVVDEV-VNAYGKIDILVNNAAVQYKA------GSVEEIDEERLE 152
            + +  D   +   + + ++V     G++D+LVNNA    +        +  E      +
Sbjct: 56  CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 115

Query: 153 RVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE-------------ARGL 197
            +    +  H+F + +  R M       I+  +S   L +                A   
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADC 175

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE---SAQFGSEVPMKR-AGQPIEVAPCYV 253
           A +L   G+    + PG + T L+    ++EE                A        C V
Sbjct: 176 AHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVV 235

Query: 254 FLACNHCSSYITGQVLH 270
            LA +     ++G+VL 
Sbjct: 236 ALATDPNILSLSGKVLP 252

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  169 bits (430), Expect = 4e-52
 Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 32/248 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+ K  L+TG   GIGRA    +A EGA +    ++    ++A E +            
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA---------- 51

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               +  D+    + +R   E +   G++D +V+ A +  +     ++  E  E V R N
Sbjct: 52  --HPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVN 108

Query: 159 IFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA-------------RGLALQLV 202
           +   F + + +   M E   GS I+ T S   L +  +A             R LAL+L 
Sbjct: 109 LTGSFLVAKAASEAMREKNPGS-IVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELG 167

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             GIRVN +APG I T +  +   E+   +  +  P+ RAG+P+EVA   +FL  +  SS
Sbjct: 168 RWGIRVNTLAPGFIETRMT-AKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE-SS 225

Query: 263 YITGQVLH 270
           +ITGQVL 
Sbjct: 226 FITGQVLF 233

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  169 bits (431), Expect = 6e-52
 Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 27/250 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L  ++ALVTG   GIGRA+A   A  GA VA  Y  S     A E +  +  A      
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGA--ADEVVAAIAAAGG---- 78

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           +  A+ AD+  +   + +   V+  +G++D+LVNNA +  +   +  +  +  + V   N
Sbjct: 79  EAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGIT-RDTLLLRMKRDDWQSVLDLN 137

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +   F  +R + + M       IIN  SV     +P                + +A +L 
Sbjct: 138 LGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA 197

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            RGI VN VAPG I T +  S  + E   +    +P+ R G+  EVA    FLA +  ++
Sbjct: 198 SRGITVNAVAPGFIATDMT-SELAAE---KLLEVIPLGRYGEAAEVAGVVRFLAADPAAA 253

Query: 263 YITGQVLHPN 272
           YITGQV++ +
Sbjct: 254 YITGQVINID 263

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  168 bits (429), Expect = 1e-51
 Identities = 70/264 (26%), Positives = 103/264 (39%), Gaps = 37/264 (14%)

Query: 35  KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT 94
           + S+  R + A VTG  SGIG AVA   A  G  V          K+    ++ LR A  
Sbjct: 17  RGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD---AKNVSAAVDGLRAA-- 71

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
               D    S D+   +     V   V  +G I ILVN+A      G   ++D+     V
Sbjct: 72  --GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRN-GGGETADLDDALWADV 128

Query: 155 FRTNIFSHFFMTRHSLRH---MNEGS-AIINTTSVEPLWHSP-EA-------------RG 196
             TN+   F +TR  LR       G   I+N  S          A             + 
Sbjct: 129 LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKS 188

Query: 197 LALQLVERGIRVNGVAPGPIWTPL----------IPSSFSEEESAQFGSEVPMKRAGQPI 246
           +  +L + GI VN V PG + TP+                +E   +F +++P+ R   P 
Sbjct: 189 VGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE 248

Query: 247 EVAPCYVFLACNHCSSYITGQVLH 270
           EVA    +L  +  ++ IT Q L+
Sbjct: 249 EVAGLVGYLVTDA-AASITAQALN 271

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  168 bits (428), Expect = 1e-51
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 39/256 (15%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           +  ++A VTGG  GIG ++      +G  V      +       + LE  +        D
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPR--RVKWLEDQKAL----GFD 64

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A   ++G  ++ K+  D+V    G+ID+LVNNA +  +     ++  E  + V  TN+
Sbjct: 65  FYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT-RDVVFRKMTREDWQAVIDTNL 123

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEARG-------------------- 196
            S F +T+  +  M E   G  IIN +SV         +G                    
Sbjct: 124 TSLFNVTKQVIDGMVERGWGR-IINISSVNGQ------KGQFGQTNYSTAKAGIHGFTMS 176

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           LA ++  +G+ VN V+PG I T ++  +   +   +  + +P++R G P E+     +LA
Sbjct: 177 LAQEVATKGVTVNTVSPGYIGTDMV-KAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA 235

Query: 257 CNHCSSYITGQVLHPN 272
               S + TG     N
Sbjct: 236 SEE-SGFSTGADFSLN 250

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  167 bits (426), Expect = 2e-51
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 27/250 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
              K ALVTG   GIGR++A   A EG  VA  Y  S+E+  A+  +E ++        D
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK--AEAVVEEIKAKGV----D 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             AI A++   +  K ++ EVV+ +G +D+LVNNA +  +   +  + E+  + V  TN+
Sbjct: 56  SFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT-RDNLLMRMKEQEWDDVIDTNL 114

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
              F   + +   M     G+ IIN +SV     +P                +  A +L 
Sbjct: 115 KGVFNCIQKATPQMLRQRSGA-IINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELA 173

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            RGI VN VAPG I + +   + S+E   Q  +++P+ R GQ  ++A    FLA +  + 
Sbjct: 174 SRGITVNAVAPGFIVSDMT-DALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDK-AK 231

Query: 263 YITGQVLHPN 272
           YITGQ +H N
Sbjct: 232 YITGQTIHVN 241

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  167 bits (426), Expect = 2e-51
 Identities = 52/254 (20%), Positives = 81/254 (31%), Gaps = 40/254 (15%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            V  +TG  SGIG A+    A  G TV              +    L      +     A
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDR------GQADIEADLSTPGGRET----A 51

Query: 103 ISADLGFDENCKRVVDEVVNA--------YGKIDILVNNAAVQYKA-GSVEEIDEERLER 153
           ++A L   + C  V+D +V             + + VN   V     G  E +   +   
Sbjct: 52  VAAVL---DRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPA 108

Query: 154 VFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPEA-------------RGLA 198
                  +        L  +             +                      R   
Sbjct: 109 AVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNV 168

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEES--AQFGSEVPMKRAGQPIEVAPCYVFLA 256
           +    RG+R+N VAPG + TPL+ +S ++     +      P+ R  +P EVA    FL 
Sbjct: 169 VDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLL 228

Query: 257 CNHCSSYITGQVLH 270
               +S+I G VL 
Sbjct: 229 GPQ-ASFIHGSVLF 241

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  167 bits (425), Expect = 3e-51
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 27/250 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVALVTG   GIGRA+A   A +GA V   Y  ++++  A E ++ +++  +    D
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQK--ANEVVDEIKKLGS----D 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+ AD+   E+   +V + V+ +G++DILVNNA V  K   +  + EE  + V  TN+
Sbjct: 56  AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNL 114

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
              F  T+   R M     G  I+N  SV  +  +P                +  A +L 
Sbjct: 115 KGVFLCTKAVSRFMMRQRHGR-IVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELA 173

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            R I VN +APG I T +      E   A+    +P  + G+  ++A    F A +  S 
Sbjct: 174 SRNITVNAIAPGFIATDMT-DVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQ-SK 231

Query: 263 YITGQVLHPN 272
           YITGQ L+ +
Sbjct: 232 YITGQTLNVD 241

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  166 bits (424), Expect = 4e-51
 Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 24/246 (9%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            V +VTG   GIG+A+A      G  V   Y +S +   A+E  + +           + 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKA--AEEVSKQIEAYGG----QAIT 55

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              D+  + + + ++   ++A+G ID++VNNA +  +   +  + + + + V   N+   
Sbjct: 56  FGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGV 114

Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
           F  T+ + + M       IIN  SV  L  +                ++  A +   R I
Sbjct: 115 FLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNI 174

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN V PG I + +  +   E+   +    +P+ R GQP  VA    FLA +  +SYITG
Sbjct: 175 NVNVVCPGFIASDMT-AKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITG 233

Query: 267 QVLHPN 272
           Q    +
Sbjct: 234 QAFTID 239

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  166 bits (423), Expect = 5e-51
 Identities = 35/253 (13%), Positives = 70/253 (27%), Gaps = 40/253 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L  K  +      GIG   +               + +      E   I  +       
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNI---- 57

Query: 99  DPMAISADLGFD-ENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                + D+       K+++ ++ +    +DIL+N A +         +D+ ++ER    
Sbjct: 58  --TFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQIERTIAI 106

Query: 158 NIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSPEA--------------RGLA 198
           N       T   L   ++     G  I N  SV       +                 LA
Sbjct: 107 NFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLA 166

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPS-SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
                 G+    + PG   TPL+ + +   +   +    +         +    +V    
Sbjct: 167 KLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI- 225

Query: 258 NHCSSYITGQVLH 270
               +   G +  
Sbjct: 226 ---EANKNGAIWK 235

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  166 bits (424), Expect = 7e-51
 Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 38/270 (14%)

Query: 26  TPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQET 85
                +    P +    +VA VTGG  G+G A++      G  VA ++ +  +       
Sbjct: 9   MGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDH--VSTW 66

Query: 86  LEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEE 145
           L   R+A     +D  A + D+   E+C+R  ++V+  +GK+D+L+NNA +  +  +  +
Sbjct: 67  LMHERDA----GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGIT-RDATFMK 121

Query: 146 IDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEARG------ 196
           + +   + V RT++ + F +T+  +  M E   G  I+N  SV         RG      
Sbjct: 122 MTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGR-IVNIGSVNGS------RGAFGQAN 174

Query: 197 --------------LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRA 242
                         LAL+  +RGI VN V+PG + T ++ +   +   A+   ++P+ R 
Sbjct: 175 YASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRL 234

Query: 243 GQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           G+P EVA    FL  +  + ++TG  L  N
Sbjct: 235 GRPDEVAALIAFLCSDD-AGFVTGADLAIN 263

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  166 bits (423), Expect = 1e-50
 Identities = 57/275 (20%), Positives = 106/275 (38%), Gaps = 51/275 (18%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE---------EKDAQETL 86
               L GKVA +TG   G GRA A   A +GA +    +  Q           ++   T+
Sbjct: 7   SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATV 66

Query: 87  EILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEI 146
           +++ +         +A  AD+   E+    +   ++  G++DI+V NA +     +    
Sbjct: 67  KLVEDI----GSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI-----APMSA 117

Query: 147 DEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA--------- 194
            ++    V   N+   +   + ++  + +   G +I+  +S   L     A         
Sbjct: 118 GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVA 177

Query: 195 ---------RGLALQLVERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGS 235
                    R  A  L  + IRVN + P  + TP+I + F          + +     G+
Sbjct: 178 AKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGN 237

Query: 236 EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
            +P++    P +VA    +L  +  + YITG  L 
Sbjct: 238 AMPVEV-LAPEDVANAVAWLVSDQ-ARYITGVTLP 270

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  166 bits (422), Expect = 2e-50
 Identities = 73/260 (28%), Positives = 107/260 (41%), Gaps = 37/260 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
               +VALVTG  SGIG  +A     EG  V         E+  + TL+ LREA      
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG---EEGLRTTLKELREA----GV 71

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           +    + D+      + +V  VV  YG +D+LVNNA      G+  E+ +E    V  TN
Sbjct: 72  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR-PGGGATAELADELWLDVVETN 130

Query: 159 IFSHFFMTRHSLRH---MNEGS-AIINTTSVEPLWHSPE--------------ARGLALQ 200
           +   F +T+  L+    +  G+  I+N  S                        + L L+
Sbjct: 131 LTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLE 190

Query: 201 LVERGIRVNGVAPGPIWTP----------LIPSSFSEEESAQFGSEVPMKRAGQPIEVAP 250
           L   GI VN V PG + TP           I    +EE   +  + VP+ R  QP EVA 
Sbjct: 191 LARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 250

Query: 251 CYVFLACNHCSSYITGQVLH 270
              +L     ++ +T Q L+
Sbjct: 251 MVAYLIGPG-AAAVTAQALN 269

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  164 bits (419), Expect = 2e-50
 Identities = 83/261 (31%), Positives = 122/261 (46%), Gaps = 47/261 (18%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL+GKV+LVTG   GIGRA+A   A  G+TV  T    +    A+   E +       A 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGER---AKAVAEEIANKYGVKAH 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG----------SVEEIDE 148
               +  +L  +E+  +  +E+ N    IDILVNN      AG          S+ + +E
Sbjct: 61  ---GVEMNLLSEESINKAFEEIYNLVDGIDILVNN------AGITRDKLFLRMSLLDWEE 111

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE------------ 193
                V + N+   F +T++SLR M     G  I+N +SV     +              
Sbjct: 112 -----VLKVNLTGTFLVTQNSLRKMIKQRWGR-IVNISSVVGFTGNVGQVNYSTTKAGLI 165

Query: 194 --ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
              + LA +L  R + VN VAPG I T +  +  SEE   ++  ++P+ R G P EVA  
Sbjct: 166 GFTKSLAKELAPRNVLVNAVAPGFIETDMT-AVLSEEIKQKYKEQIPLGRFGSPEEVANV 224

Query: 252 YVFLACNHCSSYITGQVLHPN 272
            +FL     +SYITG+V+H N
Sbjct: 225 VLFLCSEL-ASYITGEVIHVN 244

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  163 bits (414), Expect = 1e-49
 Identities = 67/250 (26%), Positives = 101/250 (40%), Gaps = 37/250 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
               +  LVTGG+ GIG A+A   A +G  VA T+  S   K                  
Sbjct: 12  PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL---------------- 55

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               +  D+   +   R    V    G +++LV+NA +      +  + EE+ E+V   N
Sbjct: 56  --FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINAN 112

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +   F + + + R M  N+   +I   SV  LW                  AR +A +L 
Sbjct: 113 LTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS 172

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           +  +  N VAPG I T +   +  E         +P KR G P EVA    FLA    +S
Sbjct: 173 KANVTANVVAPGYIDTDMT-RALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASED-AS 230

Query: 263 YITGQVLHPN 272
           YI+G V+  +
Sbjct: 231 YISGAVIPVD 240

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  163 bits (414), Expect = 2e-49
 Identities = 60/271 (22%), Positives = 99/271 (36%), Gaps = 36/271 (13%)

Query: 18  GKEHVMEPTPQFTSH---DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV 74
           G  H        + H   D K  + L G+VA+VTG   GIG A+A      GA V  T  
Sbjct: 2   GHHHHHHHHHHSSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTAR 61

Query: 75  KSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNA 134
                +  +     +  A      +  + + DL   +        V+ A+G+ D+LVNNA
Sbjct: 62  D---VEKLRAVEREIVAA----GGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNA 114

Query: 135 AVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP 192
            V +  G +  +     + +   N+ + + + R     M       IIN +S+       
Sbjct: 115 GVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA 174

Query: 193 EA--------------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP 238
           +                  A +L +  +RV+ VAPG + T       S ++S        
Sbjct: 175 DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF-GVGLSAKKS-------- 225

Query: 239 MKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
              A +P ++A     LA          +VL
Sbjct: 226 ALGAIEPDDIADVVALLATQA-DQSFISEVL 255

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  162 bits (412), Expect = 2e-49
 Identities = 41/248 (16%), Positives = 80/248 (32%), Gaps = 36/248 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           +     +VTG  SG+GRA+       G  V+    +        + L+       +    
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR-------YQRLQQQELLLGNAV-- 51

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + I ADL   E+        V   G  +++++ A      G V     E++ RV  +N+
Sbjct: 52  -IGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVMESNL 109

Query: 160 FSHFFMTRHSLRHMNEGS-AIINTTSVEPLWHSPE--------------ARGLALQLVER 204
            S   + + ++R + E    + N  S                          L  +L + 
Sbjct: 110 VSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDS 169

Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI 264
            +R+  + P  I +    ++            V       P + A   +       S ++
Sbjct: 170 PLRLVNLYPSGIRSEFWDNT----------DHVDPSGFMTPEDAAAYMLDALEARSSCHV 219

Query: 265 TGQVLHPN 272
           T   +  N
Sbjct: 220 TDLFIGRN 227

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  164 bits (416), Expect = 6e-49
 Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 32/253 (12%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           + +L G    +TG   GIG+A+A   A +GA +      +Q       T+    E   + 
Sbjct: 40  TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV 99

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               +    D+  ++     V++ +  +G IDILVNNA+      +  +   +RL+ +  
Sbjct: 100 GGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASA-ISLTNTLDTPTKRLDLMMN 158

Query: 157 TNIFSHFFMTRHSLRHM--NEGSAIINTTSV---EPLWHSPEA-------------RGLA 198
            N    +  ++  + ++  ++ + I+N +      P+W                   G+A
Sbjct: 159 VNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMA 218

Query: 199 LQLVERGIRVNGVAPG-PIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
            +  +  I VN + P   I T  +            G      +  +   +A     +  
Sbjct: 219 EEF-KGEIAVNALWPKTAIHTAAM---------DMLGGPGIESQCRKVDIIADAAYSIF- 267

Query: 258 NHCSSYITGQVLH 270
                  TG  + 
Sbjct: 268 -QKPKSFTGNFVI 279

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  163 bits (414), Expect = 6e-49
 Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 48/302 (15%)

Query: 11  QKQEAQPGKEHVMEPTPQFTSHDYKPSN--KLRGKVALVTGGDSGIGRAVAHCYALEGAT 68
           + Q   PG            S   + +   +L+GKVA +TG   G GR  A   A +GA 
Sbjct: 13  EAQTQGPGSMVDPVRRSTRVSARGQGARMNRLQGKVAFITGAARGQGRTHAVRLAQDGAD 72

Query: 69  VAFTYVKSQE---------EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE 119
           +    +  Q+          ++ +ET+ ++ E      +  +A  AD+    + + VVDE
Sbjct: 73  IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ---GRR-IIARQADVRDLASLQAVVDE 128

Query: 120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM---NEG 176
            +  +G IDILV+N  +    G V  + +++   + +TN+   +   R  L  M    +G
Sbjct: 129 ALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQG 187

Query: 177 SAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLI- 221
            ++I  +S   L  +P                  LA ++    IRVN V PG + T +  
Sbjct: 188 GSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL 247

Query: 222 -----------PSSFSEEESAQFGSEVPMKRA--GQPIEVAPCYVFLACNHCSSYITGQV 268
                        + + E++A+  S++ +      +P +V+    +LA +  + YI G  
Sbjct: 248 NEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDE-ARYIHGAA 306

Query: 269 LH 270
           + 
Sbjct: 307 IP 308

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  161 bits (410), Expect = 8e-49
 Identities = 75/270 (27%), Positives = 116/270 (42%), Gaps = 26/270 (9%)

Query: 19  KEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE 78
             H M      T         L  +VA+VTG   GIGRA+A   A  GA V  T   + E
Sbjct: 5   HHHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTA--TTE 62

Query: 79  EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY 138
              A+      ++A      +      ++        +V+  +  +G +++LVNNA +  
Sbjct: 63  AG-AEGIGAAFKQAGL----EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGIT- 116

Query: 139 KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--- 193
           +      + ++  + V  TN+ + F ++R  LR M    G  I+N TSV     +P    
Sbjct: 117 QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVN 176

Query: 194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRA 242
                       R LA ++  RGI VN VAPG I T +      +E+     +++P+ R 
Sbjct: 177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMT-KGLPQEQQTALKTQIPLGRL 235

Query: 243 GQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           G P ++A    FLA    + YITG  LH N
Sbjct: 236 GSPEDIAHAVAFLASPQ-AGYITGTTLHVN 264

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  160 bits (408), Expect = 9e-49
 Identities = 74/247 (29%), Positives = 114/247 (46%), Gaps = 26/247 (10%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           + AL+TG   GIGRA+A   A +G  +A  Y +++E+  A+E  E  R   +        
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREK--AEEVAEEARRRGSPLVA---V 56

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + A+L   E    +V +     G +D LVNNA +  +   +  + +E  E V   N+ + 
Sbjct: 57  LGANLLEAEAATALVHQAAEVLGGLDTLVNNAGIT-RDTLLVRMKDEDWEAVLEANLSAV 115

Query: 163 FFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERG 205
           F  TR +++ M     G  I+N TSV  +  +P                R +A +  +RG
Sbjct: 116 FRTTREAVKLMMKARFGR-IVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRG 174

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           I VN VAPG I T +      +E    +  ++P  R G+P EVA    FL     + YIT
Sbjct: 175 ITVNAVAPGFIETEMT-ERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEK-AGYIT 232

Query: 266 GQVLHPN 272
           GQ L  +
Sbjct: 233 GQTLCVD 239

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  161 bits (411), Expect = 1e-48
 Identities = 63/271 (23%), Positives = 99/271 (36%), Gaps = 45/271 (16%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE---------EKDAQETLEIL 89
              GK AL+TGG  G+GR+ A   A  GA +A                   D  ET+ ++
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 90  REAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE 149
            +      +  ++   D+      +  V E  +  G IDI + NA +      + E++  
Sbjct: 67  EKT---GRR-CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI-STIALLPEVESA 121

Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------------- 193
           + + V  TN+   F         M +     I+  +S+     +                
Sbjct: 122 QWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGL 181

Query: 194 ARGLALQLVERGIRVNGVAPGPIWTPLIPS--------------SFSEEESAQFGSEVPM 239
            +  A  LV  GI VN VAPG I TP+  +              +  + ES      +  
Sbjct: 182 TKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY 241

Query: 240 KRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
               +P EV    +FL     SS+ITG VL 
Sbjct: 242 APFLKPEEVTRAVLFLVDEA-SSHITGTVLP 271

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  160 bits (408), Expect = 1e-48
 Identities = 69/249 (27%), Positives = 110/249 (44%), Gaps = 37/249 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
              +  LVTGG+ GIG A+A  +A  G  VA TY   +  +                   
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF----------------- 61

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+  D+   E  ++   E+   +G +++L+ NA V  K   +  + EE    V  TN+
Sbjct: 62  -LAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNL 119

Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
              F + + + R M   +   ++  +SV  L  S                AR LA +L  
Sbjct: 120 TGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGS 179

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           R I  N VAPG + T +     ++E+ A   S+VP+ R  +P E+A    FLA +  +SY
Sbjct: 180 RNITFNVVAPGFVDTDMT-KVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDD-ASY 237

Query: 264 ITGQVLHPN 272
           ITG V+  +
Sbjct: 238 ITGAVIPVD 246

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  161 bits (409), Expect = 2e-48
 Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 30/249 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+ A+VTG  SGIGRA+AH YA  GA V         ++ A E  +    A       
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSA------- 81

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A+ ADL   E    V +E+  A  ++D+LVNNA +       EE+   R   V   N+
Sbjct: 82  -EAVVADLADLEGAANVAEELA-ATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNL 138

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
            + + ++R     M     G  I+   S+                       R LA +  
Sbjct: 139 DAAWVLSRSFGTAMLAHGSGR-IVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWA 197

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            RG+ VN +APG + T    +  +++E +A+  + +P  R   P ++    VFLA +  +
Sbjct: 198 GRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLA-SDAA 256

Query: 262 SYITGQVLH 270
           SY+ GQVL 
Sbjct: 257 SYVHGQVLA 265

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  159 bits (404), Expect = 4e-48
 Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 29/250 (11%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L GKVALVTG   GIG+A+A   A  GA V  T   + E      +  +    K     
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTA--TSESGAQAISDYLGDNGK----- 58

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               ++ ++   E+ + V+  + + +G +DILVNNA +  +   +  + EE    +  TN
Sbjct: 59  ---GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETN 114

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           + S F +++  LR M       IIN  SV     +                 + +A ++ 
Sbjct: 115 LTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 174

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            RG+ VN VAPG I T +   + ++E+     ++VP  R G P E+A    FLA    ++
Sbjct: 175 SRGVTVNTVAPGFIETDMT-KALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPE-AA 232

Query: 263 YITGQVLHPN 272
           YITG+ LH N
Sbjct: 233 YITGETLHVN 242

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  159 bits (405), Expect = 8e-48
 Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 26/250 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
               KVALVTG   GIGR +A   A   + V         +K     ++ ++        
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT---QKSCDSVVDEIKSFGY---- 93

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           +    + D+   E    V+++++  +  +DILVNNA +  +      +  +  E V RTN
Sbjct: 94  ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTN 152

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           + S F++T+   + M  N    IIN +S+  L  +                 + LA +L 
Sbjct: 153 LNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA 212

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            R I VN +APG I + +     SE+      S +P  R G P EVA    FL+ +  S 
Sbjct: 213 SRNITVNAIAPGFISSDMT-DKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDK-SG 270

Query: 263 YITGQVLHPN 272
           YI G+V   +
Sbjct: 271 YINGRVFVID 280

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  158 bits (401), Expect = 1e-47
 Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 26/250 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L  KVALVTG   GIG  VAH  A +GATV  T   + +   A++    ++E       
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTA--TSQAS-AEKFENSMKEKGF---- 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               +  ++   E+ +    E+      IDILVNNA +  +   +  + E+  + V  TN
Sbjct: 55  KARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGIT-RDNLMMRMSEDEWQSVINTN 113

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           + S F M++  +R M       II+  SV     +P               ++ LA ++ 
Sbjct: 114 LSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVA 173

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
            R I VN VAPG I T +     ++E+ +   +++P  + G+P ++A    FLA    + 
Sbjct: 174 SRNITVNVVAPGFIATDMT-DKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE-AK 231

Query: 263 YITGQVLHPN 272
           YITGQ LH N
Sbjct: 232 YITGQTLHVN 241

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  158 bits (402), Expect = 1e-47
 Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 49/261 (18%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            KL G+ ALVTG   GIG A+A C+  +GA V      ++E+K  +   ++ ++      
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHG--TREDKLKEIAADLGKDVF---- 76

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG----------SVEEID 147
                 SA+L   ++ K++ +        IDILVNN      AG            ++ D
Sbjct: 77  ----VFSANLSDRKSIKQLAEVAEREMEGIDILVNN------AGITRDGLFVRMQDQDWD 126

Query: 148 EERLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE------------ 193
           +     V   N+ +   +TR  +  M       IIN TS+  +  +P             
Sbjct: 127 D-----VLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLI 181

Query: 194 --ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC 251
             ++ LA ++  R I VN +APG I + +     +E++     + +PMKR G   E+A  
Sbjct: 182 GFSKALAQEIASRNITVNCIAPGFIKSAMT-DKLNEKQKEAIMAMIPMKRMGIGEEIAFA 240

Query: 252 YVFLACNHCSSYITGQVLHPN 272
            V+LA +  ++Y+TGQ LH N
Sbjct: 241 TVYLASDE-AAYLTGQTLHIN 260

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  154 bits (391), Expect = 4e-46
 Identities = 50/275 (18%), Positives = 85/275 (30%), Gaps = 80/275 (29%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            + +++G  +GIG A        G  +                   +R+A          
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGID---------------IRDA---------E 37

Query: 103 ISADLGFDENCKRVVDEVV-NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
           + ADL   E  K+ + +V+      +D LV  A +            + L  V   N F 
Sbjct: 38  VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGL--------GPQTKVLGNVVSVNYFG 89

Query: 162 HFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPEA------------------------- 194
              +    L  + +G   A +  +SV     + +                          
Sbjct: 90  ATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ 149

Query: 195 -----------------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ--FGS 235
                            R  A    E G+R+N +APG   TPL+ +   +    +     
Sbjct: 150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF 209

Query: 236 EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
             PM R  +P E+A    FL     +SY+ G  + 
Sbjct: 210 VPPMGRRAEPSEMASVIAFLMSPA-ASYVHGAQIV 243

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  151 bits (383), Expect = 5e-45
 Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 53/260 (20%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            L GK +L+TG  SGIG A+A      G+ V  +    ++ K     L+     +  +  
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLA 70

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG----------SVEEIDE 148
           +                    +++    +DILV N      AG            ++ D+
Sbjct: 71  NKEE--------------CSNLISKTSNLDILVCN------AGITSDTLAIRMKDQDFDK 110

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSP--------EA---- 194
                V   N+ ++F + R +++ M       IIN +S+  +  +P        +A    
Sbjct: 111 -----VIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIG 165

Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY 252
             + L+ ++  RGI VN VAPG I + +     +E++      ++P+   G P +VA   
Sbjct: 166 MTKSLSYEVATRGITVNAVAPGFIKSDMT-DKLNEKQREAIVQKIPLGTYGIPEDVAYAV 224

Query: 253 VFLACNHCSSYITGQVLHPN 272
            FLA N+ +SYITGQ LH N
Sbjct: 225 AFLASNN-ASYITGQTLHVN 243

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  155 bits (395), Expect = 8e-45
 Identities = 66/262 (25%), Positives = 102/262 (38%), Gaps = 58/262 (22%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKVA+VTG   GIG  +A  +A +GATV    V    E   +   ++   A T D   
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTA 270

Query: 100 PMAISADLGFDENCKRVVDEVVNAYG-KIDILVNNAAVQYKAGSVEEI---------DEE 149
                      +   ++   V   +G K+DILVNN      AG    I         DE+
Sbjct: 271 D----------DAVDKITAHVTEHHGGKVDILVNN------AG----ITRDKLLANMDEK 310

Query: 150 RLERVFRTNIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA------------- 194
           R + V   N+ +   +T   + +    EG  +I  +S+     +  A             
Sbjct: 311 RWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSM-----AGIAGNRGQTNYATTKA 365

Query: 195 ------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEV 248
                   LA  L ++GI +N VAPG I T +   +              + + GQP++V
Sbjct: 366 GMIGLAEALAPVLADKGITINAVAPGFIETKMT-EAIPLATREVGRRLNSLFQGGQPVDV 424

Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    + A    S+ +TG  + 
Sbjct: 425 AELIAYFASPA-SNAVTGNTIR 445

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  149 bits (378), Expect = 2e-44
 Identities = 44/253 (17%), Positives = 79/253 (31%), Gaps = 28/253 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S   R     V G    IG  +A  +A EG TV              E L  L     + 
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRN-------GEKLAPLVAEIEAA 54

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               +A S D   ++     ++   +A+  +++ + N         + E  +    +V+ 
Sbjct: 55  GGRIVARSLDARNEDEVTAFLNA-ADAHAPLEVTIFNVGAN-VNFPILETTDRVFRKVWE 112

Query: 157 TNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQ 200
              ++ F   R S R M       I  T +   L                   A+ +A +
Sbjct: 113 MACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARE 172

Query: 201 LVERGIRV-NGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           L+ + I V + +    + T  +      E+     +         P  VA  Y  L    
Sbjct: 173 LMPKNIHVAHLIIDSGVDTAWVRERR--EQMFGKDALANPDLLMPPAAVAGAYWQLYQQP 230

Query: 260 CSSYITGQVLHPN 272
            S++     + P 
Sbjct: 231 KSAWTFEMEIRPY 243

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  149 bits (378), Expect = 3e-44
 Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 31/251 (12%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S + +  +A++TG   GIG  +A   A +G  V       Q  +   + +          
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEI----MRSNKH 57

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
            ++P+ +  D+         + ++   YG +DILVN AA+            +   ++  
Sbjct: 58  VQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMD--GSLSEPVDNFRKIME 115

Query: 157 TNIFSHFFMTRHSLRHMNE-GSA-IINTTSVEPLWHSPEA--------------RGLALQ 200
            N+ + + + +     M    +  I N  S    +   +                 L  +
Sbjct: 116 INVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRE 175

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L   GIRV  + PG + T +         + + G+    +   QP ++      L     
Sbjct: 176 LAPLGIRVTTLCPGWVNTDM---------AKKAGTPFKDEEMIQPDDLLNTIRCLLNLSE 226

Query: 261 SSYITGQVLHP 271
           +  I   V   
Sbjct: 227 NVCIKDIVFEM 237

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  145 bits (369), Expect = 8e-43
 Identities = 50/261 (19%), Positives = 95/261 (36%), Gaps = 34/261 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           ++ L   V ++TG   G GRA+A   A   +  +   V ++ E   ++  E L  A+  D
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL-GAQQPD 59

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYG----KIDILVNNAAV--QYKAGSVEEIDEER 150
            K  +  +ADLG +   +R++  V         +  +L+NNAA       G +   D   
Sbjct: 60  LK-VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAE 118

Query: 151 LERVFRTNIFSHFFMTRHSLRHM----NEGSAIINTTSVEPLWHSPE------------- 193
           +   +  N+ S   +T  +L            ++N +S+  L                  
Sbjct: 119 VNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDM 178

Query: 194 -ARGLALQLVERGIRVNGVAPGPIWTPL---IPSSFSEEES-AQFGSEVPMKRAGQPIEV 248
             + LA +  E  +RV   APGP+   +      +  + E  ++                
Sbjct: 179 LYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTS 236

Query: 249 APCYVFLACNHCSSYITGQVL 269
           A   + L      ++ +G  +
Sbjct: 237 AQKLLGLLQKD--TFQSGAHV 255

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  142 bits (360), Expect = 3e-41
 Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 34/241 (14%)

Query: 12  KQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAF 71
           K + Q   +H  +   Q  + +++P   L+GK  +VTG   GIGR +A+  A  GA V  
Sbjct: 2   KHQHQHQHQHQHQ---QPLNEEFRPEM-LQGKKVIVTGASKGIGREMAYHLAKMGAHVVV 57

Query: 72  TYVKSQEEKDA--QETLE-ILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKID 128
           T         A  +ETL+ ++       A     I+  +      ++ V +     G +D
Sbjct: 58  T---------ARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD 108

Query: 129 ILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGS-AIINTTSVEP 187
           +L+ N      + ++   D   + +    N  S+  +T  +L  + + + +I+  +S+  
Sbjct: 109 MLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG 167

Query: 188 LWHSPEA--------------RGLALQLVERG--IRVNGVAPGPIWTPLIPSSFSEEESA 231
               P                  +  +       + +     G I T     + S     
Sbjct: 168 KVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHM 227

Query: 232 Q 232
           Q
Sbjct: 228 Q 228

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  139 bits (352), Expect = 5e-41
 Identities = 32/243 (13%), Positives = 71/243 (29%), Gaps = 59/243 (24%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
               L+ G    +G AV      + A V                            +   
Sbjct: 3   AMKILLIGASGTLGSAVKERLE-KKAEVITA------------------------GRHSG 37

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            ++ D+   ++ K++ ++V    GK+D +V+          + E+  E+      + +  
Sbjct: 38  DVTVDITNIDSIKKMYEQV----GKVDAIVSATGS-ATFSPLTELTPEKNAVTISSKLGG 92

Query: 162 HFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIR 207
              +    +  +N+  +   TT +       +              A+  A+++  RGIR
Sbjct: 93  QINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIR 151

Query: 208 VNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQ 267
           +N V+P  +               +              +VA  +            TG+
Sbjct: 152 INTVSPNVLEESW----------DKLEPFFEGFLPVPAAKVARAFEKSV----FGAQTGE 197

Query: 268 VLH 270
              
Sbjct: 198 SYQ 200

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  140 bits (355), Expect = 2e-40
 Identities = 55/268 (20%), Positives = 90/268 (33%), Gaps = 59/268 (22%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +  G  A+V+GG  G+G A       +G  V    +    EK      E+   A      
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADL--AAEKGKALADELGNRA------ 78

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSV----EEIDEERLERV 154
               +S ++  +++    ++           +V +         V       D     + 
Sbjct: 79  --EFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKT 136

Query: 155 FRTNIFSHFFMTRHSLRHM--------NEGSAIINTTSVE-------------------- 186
               +   + + R     +         E  A++ T S+                     
Sbjct: 137 IDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIG 196

Query: 187 ---PLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRA 242
                     AR L+      GIRVN +APG + TP++  S  EE  A+F + +P  KR 
Sbjct: 197 LTIAA-----ARDLS----SAGIRVNTIAPGTMKTPIM-ESVGEEALAKFAANIPFPKRL 246

Query: 243 GQPIEVAPCYVFLACNHCSSYITGQVLH 270
           G P E A    FL  N    YI G+V+ 
Sbjct: 247 GTPDEFADAAAFLLTN---GYINGEVMR 271

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  137 bits (347), Expect = 4e-39
 Identities = 49/229 (21%), Positives = 87/229 (37%), Gaps = 25/229 (10%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           +   G+ A+VTGG SGIG A A  +A  GA +  + V   ++   ++ +  LR       
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDV---DQPALEQAVNGLRGQ----G 79

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
            D   +  D+   +   R+ DE     G +D++ +NA +   AG + +++ +    V   
Sbjct: 80  FDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDI 138

Query: 158 NIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE--------------ARGLALQ 200
           +++         L  +     G  I  T S   L  +                A  LA +
Sbjct: 139 DLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLARE 198

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
           +   GI V+ + P  + T L+ +S     +    S  P    G      
Sbjct: 199 VKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQD 247

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  135 bits (342), Expect = 5e-39
 Identities = 54/247 (21%), Positives = 91/247 (36%), Gaps = 36/247 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVK----SQEEKDAQETLEILREAKTSDAK 98
            + L+TG   GIGRA+A  +A                S+   D ++     R        
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA---- 58

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               I+AD+    + +R+   +V  YG ID LVNNA V  + G++ ++ EE  +    TN
Sbjct: 59  LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGV-GRFGALSDLTEEDFDYTMNTN 117

Query: 159 IFSHFFMTRHSLRHMNE-GSA-IINTTSVEPLWHSPEA--------------RGLALQLV 202
           +   FF+T+     M    S  I   TSV        +                + L   
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR 177

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           +  +R+  V PG ++TP+      +E                P ++A   V       S 
Sbjct: 178 KCNVRITDVQPGAVYTPM-WGKVDDEM---------QALMMMPEDIAAPVVQAYLQP-SR 226

Query: 263 YITGQVL 269
            +  +++
Sbjct: 227 TVVEEII 233

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  135 bits (341), Expect = 1e-38
 Identities = 59/267 (22%), Positives = 93/267 (34%), Gaps = 58/267 (21%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+ +V +VTG  SG+G AV    A EGATV    +  +     +   E+          
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDL--KPPAGEEPAAELGAAV------ 55

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERVF 155
                +AD+  + +    +      +G +  LVN A         G       +   R  
Sbjct: 56  --RFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTV 113

Query: 156 RTNIFSHFFMTRHSLRHM--------NEGSAIINTTSV---------------------- 185
             N+   F M R +   M         E   I+NT S+                      
Sbjct: 114 AVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAAL 173

Query: 186 -EPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAG 243
             P      AR LA      GIRV  +APG   TP++ +   ++      + VP   R G
Sbjct: 174 TLPA-----ARELA----RFGIRVVTIAPGIFDTPMM-AGMPQDVQDALAASVPFPPRLG 223

Query: 244 QPIEVAPCYVFLACNHCSSYITGQVLH 270
           +  E A     +  N   + + G+V+ 
Sbjct: 224 RAEEYAALVKHICEN---TMLNGEVIR 247

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  133 bits (336), Expect = 6e-38
 Identities = 62/269 (23%), Positives = 100/269 (37%), Gaps = 60/269 (22%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
            ++G VA++TGG SG+G A A     +GA+     +         +  ++          
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDL--PNSGGEAQAKKLGNNCV----- 61

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ-----YKAGSVEEIDEERLER 153
                 AD+  +++ +  +      +G++D+ VN A +      Y     +    E  +R
Sbjct: 62  ---FAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQR 118

Query: 154 VFRTNIFSHFFMTRHSLRHM--------NEGSAIINTTSV-------------------- 185
           V   N+   F + R     M         +   IINT SV                    
Sbjct: 119 VLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIV 178

Query: 186 ---EPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KR 241
               P+     AR LA      GIRV  +APG   TPL+ +S  E+      S+VP   R
Sbjct: 179 GMTLPI-----ARDLA----PIGIRVMTIAPGLFGTPLL-TSLPEKVCNFLASQVPFPSR 228

Query: 242 AGQPIEVAPCYVFLACNHCSSYITGQVLH 270
            G P E A     +  N    ++ G+V+ 
Sbjct: 229 LGDPAEYAHLVQAIIEN---PFLNGEVIR 254

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  132 bits (335), Expect = 4e-37
 Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 42/261 (16%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATV-------AFTYVKSQEEKDAQETL-EILRE 91
           + G+V +VTG   GIGRA A  +A EGA V             +     AQ  + EI   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEI--T 82

Query: 92  AKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL 151
           A   +A   +A  +++   +    ++   V  +G +D+LVNNA +  +   +    EE  
Sbjct: 83  AAGGEA---VADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI-VRDRMIANTSEEEF 138

Query: 152 ERVFRTNIFSHFFMTRHSLRHMNEGS--------AIINTTSVEPLWHSPE---------- 193
           + V   ++  HF   RH+  +    S         IINT+S   L  S            
Sbjct: 139 DAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAG 198

Query: 194 ----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
                   A ++   G+ VN +AP    T +  + F+E  + Q         A  P  V+
Sbjct: 199 IATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQ----DQDFDAMAPENVS 253

Query: 250 PCYVFLACNHCSSYITGQVLH 270
           P  V+L        +TG+V  
Sbjct: 254 PLVVWLGSAEA-RDVTGKVFE 273

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  128 bits (325), Expect = 2e-36
 Identities = 62/269 (23%), Positives = 91/269 (33%), Gaps = 64/269 (23%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           ++R  VA+VTGG SG+G A        GA V    ++   E    +              
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR--GEDVVADL-----------GD 52

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERVF 155
                +AD+  +      +D +    G + I+VN A                     ++ 
Sbjct: 53  RARFAAADVTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIV 111

Query: 156 RTNIFSHFFMTRHSLRHM----------NEGSAIINTTSV-------------------- 185
             N+   F + R +   +           E   IINT SV                    
Sbjct: 112 DINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVV 171

Query: 186 ---EPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KR 241
               P+     AR LA       IRV  +APG   TPL+ +S  EE  A  G +VP   R
Sbjct: 172 GMTLPI-----ARDLA----SHRIRVMTIAPGLFDTPLL-ASLPEEARASLGKQVPHPSR 221

Query: 242 AGQPIEVAPCYVFLACNHCSSYITGQVLH 270
            G P E     V +  N     + G+V+ 
Sbjct: 222 LGNPDEYGALAVHIIEN---PMLNGEVIR 247

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  128 bits (324), Expect = 3e-36
 Identities = 51/247 (20%), Positives = 90/247 (36%), Gaps = 35/247 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ K+A+VTG   G+G  +    + +    A             E L  L E +  +   
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGR--------NPEHLAALAEIEGVE--- 51

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              I +D+  +   +  VD+ +     +D LV+ AAV  +  ++E             N+
Sbjct: 52  --PIESDIVKEVLEEGGVDK-LKNLDHVDTLVHAAAV-ARDTTIEAGSVAEWHAHLDLNV 107

Query: 160 FSHFFMTRHSLRHMNEGSA-IINTTSVEPLWHSPE--------------ARGLALQLVER 204
                ++R  L  +   S  +I   S       P               A     +    
Sbjct: 108 IVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANN 167

Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI 264
           GIRV+ V+PGP  TP+      + +   F  E+ +    +P E+A    F+     ++ I
Sbjct: 168 GIRVSTVSPGPTNTPM-LQGLMDSQGTNFRPEIYI----EPKEIANAIRFVIDAGETTQI 222

Query: 265 TGQVLHP 271
           T   + P
Sbjct: 223 TNVDVRP 229

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  125 bits (316), Expect = 4e-35
 Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 68/263 (25%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           + ALVTGG SG+GRA A      G  V    ++                    + +D + 
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLR-------------------REGEDLIY 43

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERVFRTNI 159
           +  D+  +E+ +R V         +  +V+ A V       G       E   RV   N+
Sbjct: 44  VEGDVTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNL 102

Query: 160 FSHFFMTRHSLRHM--------NEGSAIINTTSV-----------------------EPL 188
              F + R +   M         +   I+NT SV                        P 
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPA 162

Query: 189 WHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIE 247
                AR LA      GIRV  VAPG   TPL+     E+  A   ++VP   R G+P E
Sbjct: 163 -----ARELA----GWGIRVVTVAPGLFDTPLL-QGLPEKAKASLAAQVPFPPRLGRPEE 212

Query: 248 VAPCYVFLACNHCSSYITGQVLH 270
            A   + +  N     + G+V+ 
Sbjct: 213 YAALVLHILEN---PMLNGEVVR 232

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  123 bits (310), Expect = 2e-33
 Identities = 44/244 (18%), Positives = 79/244 (32%), Gaps = 38/244 (15%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
               G+ A VTGG +G+G  +      +G  VA   +    +    + L  L    +   
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADI---RQDSIDKALATLEAEGS--G 58

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
            + M +  D+   E  K   DEV   +G + IL NNA V      +EE   +  + +   
Sbjct: 59  PEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGV 117

Query: 158 NIFSHFFMTRHSLRHM--------NEGSAIINTTSVEPLWHSPEA--------------R 195
           N+          +  M         +G  ++NT S+     +                  
Sbjct: 118 NLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSE 177

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSS----------FSEEESAQFGSEVPMKRAGQP 245
            L   L++  I V+ + PG + + +  S               +         +   G  
Sbjct: 178 SLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGME 237

Query: 246 IEVA 249
            +V 
Sbjct: 238 PDVI 241

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  122 bits (307), Expect = 4e-33
 Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 45/254 (17%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV------KSQEEKDAQETL-EILREA 92
             G+V LVTG   G+GRA A  +A  GA V    +        +    A + + EI    
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI--RR 64

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
           +   A   +A    +   E  +++V   ++ +G+ID++VNNA +  +  S   I +E  +
Sbjct: 65  RGGKA---VANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWD 117

Query: 153 RVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARG 196
            + R ++   F +TR +  HM +     II T S   ++ +                A  
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANT 177

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           L ++  +  I  N +AP    + +  +   E+               +P  VAP  ++L 
Sbjct: 178 LVIEGRKNNIHCNTIAPN-AGSRMTETVMPEDLVEAL----------KPEYVAPLVLWLC 226

Query: 257 CNHCSSYITGQVLH 270
             H S    G +  
Sbjct: 227 --HESCEENGGLFE 238

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  123 bits (311), Expect = 3e-32
 Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 45/254 (17%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATV------AFTYVKSQEEKDAQETL-EILREA 92
            + KV ++TG   G+G+  +  +A  GA V           +    K A   + EI    
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI--VK 63

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
               A   +A   ++    +  ++V+  V  +G + +++NNA +  +  S++++ E+  +
Sbjct: 64  NGGVA---VADYNNV---LDGDKIVETAVKNFGTVHVIINNAGI-LRDASMKKMTEKDYK 116

Query: 153 RVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARG 196
            V   ++   F +T+ +  +  +     I+NT+S   L+ +                A  
Sbjct: 117 LVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAET 176

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           LA +  +  I+ N +AP    + +  S               M     P +VAP  ++L+
Sbjct: 177 LAKEGAKYNIKANAIAPL-ARSRMTESIMPPP----------MLEKLGPEKVAPLVLYLS 225

Query: 257 CNHCSSYITGQVLH 270
                + +TGQ   
Sbjct: 226 --SAENELTGQFFE 237

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  119 bits (299), Expect = 1e-30
 Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 45/287 (15%)

Query: 1   MASGNQQFPPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAH 60
                 Q+P    +                     P+  L+ KV L+TG  +G+G+  A 
Sbjct: 283 PEYLKNQYPFMLNDYATLTNE--ARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAK 340

Query: 61  CYALEGATVAFTYVKSQEEKDAQETL-EILREAKTSDAKDPMAISADLGFDENCKRVVDE 119
            +A  GA V     K     DA +T+ EI  +A   +A        D+   ++ + ++  
Sbjct: 341 WFAKYGAKVVVNDFK-----DATKTVDEI--KAAGGEA---WPDQHDVA--KDSEAIIKN 388

Query: 120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GS 177
           V++ YG IDILVNNA +  +  S  ++ ++  + V + ++   F ++R +  +  E    
Sbjct: 389 VIDKYGTIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG 447

Query: 178 AIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS 223
            IIN TS   ++ +                ++ +A++  +  I+VN VAP    T +  S
Sbjct: 448 RIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH-AETAMTLS 506

Query: 224 SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
              E+           K      +VAP  V+L        +TG+   
Sbjct: 507 IMREQ----------DKNLYHADQVAPLLVYLG--TDDVPVTGETFE 541

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  117 bits (295), Expect = 8e-32
 Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 29/207 (14%)

Query: 35  KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT 94
           K    + G++ L+TG   GIGR  A+ +A   + +    +    +   +ET    +    
Sbjct: 24  KRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN---KHGLEETAAKCKGLGA 80

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
                      D    E+      +V    G + ILVNNA V Y    +    + ++E+ 
Sbjct: 81  ----KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKT 135

Query: 155 FRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE----------ARGL--AL 199
           F  N+ +HF+ T+  L  M   N G  I+   S       P           A G    L
Sbjct: 136 FEVNVLAHFWTTKAFLPAMTKNNHG-HIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTL 194

Query: 200 -----QLVERGIRVNGVAPGPIWTPLI 221
                 L   G++   + P  + T  I
Sbjct: 195 TDELAALQITGVKTTCLCPNFVNTGFI 221

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  108 bits (271), Expect = 1e-28
 Identities = 34/224 (15%), Positives = 78/224 (34%), Gaps = 42/224 (18%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTSDAKDP 100
            + ++TG  SG+G  +A  Y  EG     T            +  L  +    +++    
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLT---------GRSESKLSTVTNCLSNNVG-- 50

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
              + DL   +  +++ +++         +V++A   Y  G ++E D E+++ +   N+ 
Sbjct: 51  -YRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGY-FGLLQEQDPEQIQTLIENNLS 105

Query: 161 SHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPEA--------------RGLALQLVERG 205
           S   + R  ++   +    ++   S        +                 + L+L  + 
Sbjct: 106 SAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKP 165

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
           +++  V PG + T      F E       +   M       + A
Sbjct: 166 MKIIAVYPGGMATE-----FWETSGKSLDTSSFM----SAEDAA 200

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  106 bits (267), Expect = 5e-28
 Identities = 44/207 (21%), Positives = 76/207 (36%), Gaps = 26/207 (12%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTSDAKD 99
            KVA++TG   GIG A+A   A +G  +A           A   + LE +      +   
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALG---------ARSVDRLEKIAHELMQEQGV 52

Query: 100 P-MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                  D+   E+ +    +V+  +G +D++V NA + Y    +EE+ EE    +   N
Sbjct: 53  EVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFHEMIEVN 111

Query: 159 IFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPEA----------RGL--ALQLVERG 205
           +   +   +  L  +   G   + TTS       P            R L    Q+    
Sbjct: 112 LLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIENPD 171

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQ 232
           +R   + PG + T    S   + +   
Sbjct: 172 VRFFELRPGAVDTYFGGSKPGKPKEKG 198

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  105 bits (265), Expect = 6e-28
 Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 54/223 (24%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTSDAKDPMA 102
            L+TG   G+G A A   AL+G  +  +               L  L     + A     
Sbjct: 3   VLITGATGGLGGAFAR--ALKGHDLLLS---------GRRAGALAELAREVGARA----- 46

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           + ADL  +   K +++E     G +D+LV+         SV E   + +E +   ++ + 
Sbjct: 47  LPADLADELEAKALLEEA----GPLDLLVHAVGK-AGRASVREAGRDLVEEMLAAHLLT- 100

Query: 163 FFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
                  L+H     G+  +   +       P                     +L+  G+
Sbjct: 101 ---AAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGV 157

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
            +  V    + T L                 P K A  P E A
Sbjct: 158 HLVLVRLPAVATGLWAP-----------LGGPPKGALSPEEAA 189

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  106 bits (268), Expect = 9e-28
 Identities = 44/216 (20%), Positives = 76/216 (35%), Gaps = 29/216 (13%)

Query: 35  KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREA 92
            P          +TG  SG G A A  +A  G ++  T            +E L+ L   
Sbjct: 14  VPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLT---------GRREERLQAL-AG 63

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
           + S     + ++ D+         VD +   +  +  L+NNA +       +  D +  +
Sbjct: 64  ELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWD 123

Query: 153 RVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA--------------R 195
            +  TNI    + TR  L  +     G++I+N  SV   W  P +               
Sbjct: 124 TMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSL 183

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA 231
            L   L   G+RV  + PG   +      F  +++ 
Sbjct: 184 NLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQAR 219

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  104 bits (263), Expect = 2e-27
 Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 34/198 (17%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTSDAKD 99
               L+TG   GIG A A     +G  V            A  ++ L+ L      + + 
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLM---------ARDEKRLQALAA----ELEG 51

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            + +  D+  + +  R V  +  A+G++  LVNNA V      V E+  E    V  TN+
Sbjct: 52  ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNL 110

Query: 160 FSHFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPEA--------------RGLALQLV 202
              F   RH++  +     G+ I+N  S+                           L L 
Sbjct: 111 TGAFLGIRHAVPALLRRGGGT-IVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLR 169

Query: 203 ERGIRVNGVAPGPIWTPL 220
           E  +RV  V PG + T  
Sbjct: 170 EANVRVVNVLPGSVDTGF 187

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  109 bits (273), Expect = 4e-27
 Identities = 49/254 (19%), Positives = 96/254 (37%), Gaps = 45/254 (17%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATV------AFTYVKSQEEKDAQETL-EILREA 92
             G+VA+VTG  +G+GR  A  +A  GA V               ++ A   + EI    
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEI--RK 74

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
              +A   +A    +    +  +V++  + A+G++DILVNNA +  +  S+ +  E+   
Sbjct: 75  AGGEA---VADYNSV---IDGAKVIETAIKAFGRVDILVNNAGIL-RDRSLVKTSEQDWN 127

Query: 153 RVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARG 196
            V   ++   F  T+ +  +M +     II T+S   ++ +                A  
Sbjct: 128 LVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANT 187

Query: 197 LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA 256
           +A++     +  N + P    + +      +    +           +P  +AP   +L 
Sbjct: 188 VAIEGARNNVLCNVIVPTA-ASRMTEGILPDILFNEL----------KPKLIAPVVAYLC 236

Query: 257 CNHCSSYITGQVLH 270
              C     G  + 
Sbjct: 237 HESCE--DNGSYIE 248

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  102 bits (257), Expect = 2e-26
 Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 27/201 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKT 94
            + L+GKVAL+TG  SGIG A A   A EGA VA           A   E L  L +  T
Sbjct: 2   PSALQGKVALITGASSGIGEATARALAAEGAAVAIA---------ARRVEKLRALGDELT 52

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
           +       +  D+   +     V   V A G +DILVNNA +    G VE+ D     R+
Sbjct: 53  AAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRM 111

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSA-IINTTSVEPLWHSPEA--------------RGLAL 199
             TN+    +MTR +L H+      ++  +S+    +   A                L  
Sbjct: 112 IDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQ 171

Query: 200 QLVERGIRVNGVAPGPIWTPL 220
           ++ ERG+RV  + PG   T L
Sbjct: 172 EVTERGVRVVVIEPGTTDTEL 192

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  102 bits (257), Expect = 6e-26
 Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 20/194 (10%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            K+ L+TG  SG GR  A   A  G  V  + ++    ++A   +E +      +  D  
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVYAS-MRDIVGRNASN-VEAIAGFARDNDVDLR 62

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            +  D+    +  R +D+++   G+ID+L++NA      G  E    E+   ++  N+ S
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLS 121

Query: 162 HFFMTRHSLRHMNE-GS-AIINTTSVEPLWHSPEARG---------------LALQLVER 204
              + R +L HM       +I  +S      +P                    A +L   
Sbjct: 122 TQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRW 181

Query: 205 GIRVNGVAPGPIWT 218
           GI  + + PG   +
Sbjct: 182 GIETSIIVPGAFTS 195

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  100 bits (252), Expect = 2e-25
 Identities = 61/200 (30%), Positives = 84/200 (42%), Gaps = 31/200 (15%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KV LVTG  SG GRA+A      G TV  T  ++       E L+ L  A    A+   A
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT-------EALDDLVAAYPDRAE---A 55

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           IS D+   E    V  +V+  YG++D+LVNNA      G+ EE  E  L  +F  ++F  
Sbjct: 56  ISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGP 114

Query: 163 FFMTRHSLRHMNE--GSAIINTTSVEPLWHSP----------------EARGLALQLVER 204
             +TR  L  M E    +++N +S                        E   LA ++   
Sbjct: 115 ARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEG--LADEVAPF 172

Query: 205 GIRVNGVAPGPIWTPLIPSS 224
           GI+V  V PG   T L    
Sbjct: 173 GIKVLIVEPGAFRTNLFGKG 192

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 96.7 bits (241), Expect = 7e-24
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 9/145 (6%)

Query: 42  GKVALVTGGDSGIGRAVAHCYA-LEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP 100
             VALVTGG+ GIG A+      L    V    + +++    Q  ++ L+     +   P
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDV---VLTARDVTRGQAAVQQLQA----EGLSP 56

Query: 101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
                D+   ++ + + D +   YG +D+LVNNA + +K          + E   +TN F
Sbjct: 57  RFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTP-FHIQAEVTMKTNFF 115

Query: 161 SHFFMTRHSLRHMNEGSAIINTTSV 185
               +    L  +     ++N +S+
Sbjct: 116 GTRDVCTELLPLIKPQGRVVNVSSI 140

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 96.6 bits (241), Expect = 7e-24
 Identities = 53/234 (22%), Positives = 85/234 (36%), Gaps = 32/234 (13%)

Query: 21  HVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG---ATVAFTYVKSQ 77
             + P     S   K + +L  K  L+TG  +GIG+A A  Y         +        
Sbjct: 12  SFLVPRGSHMSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILA----- 66

Query: 78  EEKDA--QETLEILRE--AKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNN 133
               A   E LE L++   +            D+   E  K  ++ +   +  IDILVNN
Sbjct: 67  ----ARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNN 122

Query: 134 AAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSA--IINTTSVEPLWHS 191
           A     +  V +I  E ++ VF TN+ +   +T+  L      ++  I+N  S+      
Sbjct: 123 AGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY 182

Query: 192 PEA--------------RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA 231
           P                  L  +L+   IRV  +APG + T      +   E  
Sbjct: 183 PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQ 236

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 41/208 (19%), Positives = 72/208 (34%), Gaps = 34/208 (16%)

Query: 31  SHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEI 88
           +   +       K+ ++TG  SGIG A+A  ++ EG  +            A   E L+ 
Sbjct: 5   TGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLL---------ARRVERLKA 55

Query: 89  LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
           L    T      +    D+         +      YG  D +VNNA +    G ++  + 
Sbjct: 56  LNLPNT------LCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEA 108

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNE-GSA-IINTTSVEPLWHSPEA------------ 194
              +R+F  N+       +  L  M       IIN +S+      P+             
Sbjct: 109 NEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHA 168

Query: 195 --RGLALQLVERGIRVNGVAPGPIWTPL 220
               +  ++    +RV  +AP  + T L
Sbjct: 169 ISENVREEVAASNVRVMTIAPSAVKTEL 196

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 95.3 bits (238), Expect = 1e-23
 Identities = 50/208 (24%), Positives = 75/208 (36%), Gaps = 26/208 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTSDA 97
           +  KV L+TG   GIG  +A    + GA +            A  Q  +E +        
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLG---------ARRQARIEAIATEIRDAG 52

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              +A   D+    +        V+ +G+ID+LVNNA V      +  +  +  ER+   
Sbjct: 53  GTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMIDV 111

Query: 158 NIFSHFFMTRHSLRHMNEGSA--IINTTSVEPLWHSP------------EARGLALQLVE 203
           NI    +     L  M    +  IIN  S+  L   P             A    L+   
Sbjct: 112 NIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES 171

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESA 231
             IRV  V PG + + L  +   EE  A
Sbjct: 172 TNIRVTCVNPGVVESELAGTITHEETMA 199

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 94.8 bits (236), Expect = 6e-23
 Identities = 51/241 (21%), Positives = 85/241 (35%), Gaps = 40/241 (16%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            V L+TG  SGIG  +A        + +F    +  +   Q  L     A          
Sbjct: 3   TVVLITGCSSGIGLHLAV-RLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           +  D+   ++     + V    G++D+LV NA +    G +E + E+ +  V   N+   
Sbjct: 62  LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGT 118

Query: 163 FFMTRHSLRHMNE-GS-AIINTTSVEPLWHSP----------------EARGLALQLVER 204
             M +  L  M   GS  ++ T SV  L   P                E+  LA+ L+  
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCES--LAVLLLPF 176

Query: 205 GIRVNGVAPGPIWTPLIPSSFSEEESA----------------QFGSEVPMKRAGQPIEV 248
           G+ ++ +  GP+ T  +       E                      +V  + A  P EV
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV 236

Query: 249 A 249
           A
Sbjct: 237 A 237

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 91.2 bits (227), Expect = 6e-22
 Identities = 44/220 (20%), Positives = 78/220 (35%), Gaps = 36/220 (16%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTS 95
            + R ++ALVTG   GIG AVA     +G  V            A     +E L     S
Sbjct: 28  ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGC---------ARTVGNIEELAAECKS 78

Query: 96  DAKDP--MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER 153
                  +    DL  +E+   +   + + +  +DI +NNA +  +  ++        + 
Sbjct: 79  AGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKD 137

Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSA----IINTTSVEPLWHSPEA------------RGL 197
           +F  N+ +    TR + + M E +     IIN  S+      P +              L
Sbjct: 138 MFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTAL 197

Query: 198 A------LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA 231
                  L+  +  IR   ++PG + T        ++   
Sbjct: 198 TEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEK 237

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 88.0 bits (219), Expect = 5e-21
 Identities = 43/193 (22%), Positives = 66/193 (34%), Gaps = 30/193 (15%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA--QETLEILREAKTSDAKDPM 101
           + LVTG  +G G  +   +  +G  V  T            QE L+ L++    +     
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIAT---------GRRQERLQELKDELGDNL---Y 49

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
               D+      + ++  +   +  IDILVNNA +        +   E  E +  TN   
Sbjct: 50  IAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKG 109

Query: 162 HFFMTRHSLRHMNEGSA--IINTTSVEPLWHSPEA--------------RGLALQLVERG 205
             +MTR  L  M E +   IIN  S    W                     L   L    
Sbjct: 110 LVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 206 IRVNGVAPGPIWT 218
           +RV  + PG +  
Sbjct: 170 VRVTDIEPGLVGG 182

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 85.5 bits (212), Expect = 5e-20
 Identities = 37/212 (17%), Positives = 67/212 (31%), Gaps = 46/212 (21%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
              +VTG + GIG  +      +          +++ + A E    L+  K S       
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRH-IIATARDVEKATE----LKSIKDSRVH---V 55

Query: 103 ISADLGFDENCKRVVDEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
           +   +  D++    V +V    G   + +L+NNA V    G+  E +   +      N  
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 161 SHFFMTRHSLRHMNEGSA-------------IINTTSV--------EPLWHSPE------ 193
           S   +T+  L  +   ++             +I  +S               P       
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175

Query: 194 -------ARGLALQLVERGIRVNGVAPGPIWT 218
                   R LA+ L +  + V    PG  W 
Sbjct: 176 KAAINMFGRTLAVDLKDDNVLVVNFCPG--WV 205

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 83.1 bits (206), Expect = 7e-19
 Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 43/259 (16%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L  K  ++ G      I   VA      GA + FTY   ++E+ +++ LE L   +  + 
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTY---RKER-SRKELEKL--LEQLNQ 83

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERV 154
            +      D+  DE      +++    G ID + ++ A        G   E   E     
Sbjct: 84  PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLA 143

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--RGLALQ 200
              + +S   +   + + M EG +I+ TT       + +         S EA  + LAL 
Sbjct: 144 QDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALD 203

Query: 201 LVERGIRVNGVAPGPIWTPL----IPS-----SFSEEESAQFGSEVPMKRAGQPIEVAPC 251
           L    IRVN ++ GPI T L    +          EE +       P+KR    +EV   
Sbjct: 204 LGPDNIRVNAISAGPIRT-LSAKGVGGFNTILKEIEERA-------PLKRNVDQVEVGKT 255

Query: 252 YVFLACNHCSSYITGQVLH 270
             +L  +  SS +TG+ +H
Sbjct: 256 AAYL-LSDLSSGVTGENIH 273

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 82.7 bits (204), Expect = 1e-18
 Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 38/184 (20%)

Query: 33  DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           +  P+   + + A+VTGG+ GIG  +    +  G  V  T    ++     E +E L+  
Sbjct: 3   ETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLT---CRDVTKGHEAVEKLKN- 58

Query: 93  KTSDAKDPMAISADLG-FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE------- 144
             S+ ++ +    D+         + D +   +GK+DILVNNA V   +   +       
Sbjct: 59  --SNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMIS 116

Query: 145 ----------------------EIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSA--II 180
                                     E  E   + N      +T   +  +    +  I+
Sbjct: 117 DIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIV 176

Query: 181 NTTS 184
           N +S
Sbjct: 177 NVSS 180

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 59/259 (22%), Positives = 96/259 (37%), Gaps = 43/259 (16%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L G+  +V G      I   +A      GA + FTY     E+  ++++  L  A T D 
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTY---AGER-LEKSVHEL--AGTLDR 58

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERV 154
            D + +  D+  D   +     +    G I  + +  A   K    G     + +     
Sbjct: 59  NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLA 118

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--RGLALQ 200
              + +S   + + +   M EG +I+  T       + +         S +A  + LA  
Sbjct: 119 HNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAAD 178

Query: 201 LVERGIRVNGVAPGPIWTPLIPS---------SFSEEESAQFGSEVPMKRAGQPIEVAPC 251
           L +  IRVN ++ GPI T L               EE +       P++R   P EV   
Sbjct: 179 LGKENIRVNSISAGPIRT-LSAKGISDFNSILKDIEERA-------PLRRTTTPEEVGDT 230

Query: 252 YVFLACNHCSSYITGQVLH 270
             FL  +  S  ITG+ LH
Sbjct: 231 AAFL-FSDMSRGITGENLH 248

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 37/204 (18%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
              L+TG + G+G  +              +   +  + A+E LE L     S+      
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLA-KNHSNIH---I 76

Query: 103 ISADLGFDENCKRVVDEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
           +  DL   +   ++V ++        +++L NNA +  K+  +  +  + L    +TN  
Sbjct: 77  LEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTV 136

Query: 161 SHFFMTRHSLRHMNEGS-------------AIINTTSV--------EPLWHSPEA----- 194
               + +  L  + + +             AIIN +S+        +   ++        
Sbjct: 137 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSAL 196

Query: 195 ----RGLALQLVERGIRVNGVAPG 214
               + L++ L  + I    + PG
Sbjct: 197 NAATKSLSVDLYPQRIMCVSLHPG 220

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 45/259 (17%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK ALV G      +G A+A      GA VA +Y   Q E+  +   E L EA     
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY---QAER-LRPEAEKLAEALGGA- 60

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERV 154
              +   AD+  DE    +   V  A+G +D LV+  A   +    G   +   +     
Sbjct: 61  ---LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--RGLALQ 200
              + +S   + R +   + EG  I+  T   S + +           + EA  R LA +
Sbjct: 118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE 177

Query: 201 LVERGIRVNGVAPGPIWTPL----IPS-----SFSEEESAQFGSEVPMKRAGQPIEVAPC 251
           L  +G+RVN ++ GP+ T +    IP          + +       P++R     EV   
Sbjct: 178 LGPKGVRVNAISAGPVRT-VAARSIPGFTKMYDRVAQTA-------PLRRNITQEEVGNL 229

Query: 252 YVFLACNHCSSYITGQVLH 270
            +FL  +  +S ITG+V++
Sbjct: 230 GLFL-LSPLASGITGEVVY 247

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 54/264 (20%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  L+TG   +  I   +A     EGA +AFTY     ++  ++ +        S+ 
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTY---VGDR-FKDRITEFAAEFGSE- 66

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              +    D+  D     +   +   +  +D LV++     +    E I  + L+ + R 
Sbjct: 67  ---LVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPR----EAIAGDFLDGLTRE 119

Query: 158 N------IFSHFF--MTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--R 195
           N      I ++ F  + + +L  +++ ++++  +   +   + +         + EA  R
Sbjct: 120 NFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVR 179

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPS---------SFSEEESAQFGSEVPMKRAGQPI 246
            LA+ L  +G+RVN ++ GPI T L  S          F E  S       P+KR     
Sbjct: 180 YLAVSLGAKGVRVNAISAGPIKT-LAASGIKSFGKILDFVESNS-------PLKRNVTIE 231

Query: 247 EVAPCYVFLACNHCSSYITGQVLH 270
           +V     FL  +  +S +T +V+H
Sbjct: 232 QVGNAGAFL-LSDLASGVTAEVMH 254

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 78.1 bits (193), Expect = 4e-17
 Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 45/277 (16%)

Query: 22  VMEPTPQFTSHDYKPSNKLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEE 79
            +E   Q        S  L+GK  L+ G   +  I   +A      GA +AFTY   Q +
Sbjct: 11  TLEAQTQGPGSMTAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTY---QGD 67

Query: 80  KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK 139
              ++ +E L E   +     +A   D+    +   V + +   +GK+D LV+      K
Sbjct: 68  A-LKKRVEPLAEELGAF----VAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDK 122

Query: 140 ---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH--- 190
               G   +  E         +++S   ++R + + M +G +I+  T   + + + +   
Sbjct: 123 DELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNV 182

Query: 191 ------SPEA--RGLALQLVERGIRVNGVAPGPIWTPLIPS---------SFSEEESAQF 233
                 + EA  + LA+ L  + IRVN ++ GPI T L  S          ++E  +   
Sbjct: 183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKT-LAASGIGDFRYILKWNEYNA--- 238

Query: 234 GSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
               P++R     EV    ++   +  S  +TG+V H
Sbjct: 239 ----PLRRTVTIDEVGDVGLYF-LSDLSRSVTGEVHH 270

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 63/264 (23%), Positives = 106/264 (40%), Gaps = 54/264 (20%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LVTG      I   +A     EGA +AFTY   Q +K  +  +E       SD 
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY---QNDK-LKGRVEEFAAQLGSD- 61

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              + +  D+  D +   +  E+   + K D  V++          +++D + +  V R 
Sbjct: 62  ---IVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPG----DQLDGDYVNAVTRE 114

Query: 158 NI--------FSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--R 195
                     +S   M +     +N GSA++  +   +   + +         S EA  R
Sbjct: 115 GFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVR 174

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPS---------SFSEEESAQFGSEVPMKRAGQPI 246
            +A  +   G+RVN ++ GPI T L  S         +  E  +       P++R     
Sbjct: 175 YMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVT-------PIRRTVTIE 226

Query: 247 EVAPCYVFLACNHCSSYITGQVLH 270
           +V     FL C+  S+ I+G+V+H
Sbjct: 227 DVGNSAAFL-CSDLSAGISGEVVH 249

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 78.3 bits (193), Expect = 5e-17
 Identities = 56/285 (19%), Positives = 97/285 (34%), Gaps = 58/285 (20%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYV---------KSQEEKDAQETLEI 88
           LRG+ A V G     G G A+A   A  GA VA               Q  +  ++    
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 89  LREAKTSDAKDPMAISADLGFDENC----------------KRVVDEVVNAYGKIDILVN 132
                      P+  + D   D                   K V  +V    G IDILV+
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 133 NAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT-----S 184
             ++         + E   +        + +S   + +H    MNEG + +  +      
Sbjct: 127 --SLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAER 184

Query: 185 VEPLWH--------SPEA--RGLALQL-VERGIRVNGVAPGPIWTPLIPSSFSEEESAQF 233
           V P +         + E+  R LA +   + G+RVN ++ GP+ +    S+  +     F
Sbjct: 185 VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS-RAASAIGKSGEKSF 243

Query: 234 GSEV--------PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
                       P++R     +V    +FL  +  +  ++G  L+
Sbjct: 244 IDYAIDYSYNNAPLRRDLHSDDVGGAALFL-LSPLARAVSGVTLY 287

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 58/259 (22%), Positives = 110/259 (42%), Gaps = 45/259 (17%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L+GK  L+ G   +  I   +A     +GAT+AFTY     E   ++ +  + +   S  
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY---LNES-LEKRVRPIAQELNSP- 58

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERV 154
                   D+  +E+ K + + V    G +D +V++ A   K    GS+ E  +      
Sbjct: 59  ---YVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTA 115

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--RGLALQ 200
              +++S   +T      +N G++++  +   S + + H         + E+  R LA+ 
Sbjct: 116 MEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVD 175

Query: 201 LVERGIRVNGVAPGPIWTPL----IPS-----SFSEEESAQFGSEVPMKRAGQPIEVAPC 251
           L +  IRVN ++ GPI T L    I        ++E  +       P+++     EV   
Sbjct: 176 LGKHHIRVNALSAGPIRT-LASSGIADFRMILKWNEINA-------PLRKNVSLEEVGNA 227

Query: 252 YVFLACNHCSSYITGQVLH 270
            ++L  +  SS ++G+V  
Sbjct: 228 GMYL-LSSLSSGVSGEVHF 245

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 49/264 (18%), Positives = 103/264 (39%), Gaps = 45/264 (17%)

Query: 35  KPSNKLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           +    + GK  ++ G   D  +   +A     +GA VA TY     E   ++ ++ L E+
Sbjct: 23  RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTY---LSET-FKKRVDPLAES 78

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEE 149
                   + +  D+   E+   +   +   +G +D +V+  A   K    G   +    
Sbjct: 79  LGVK----LTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLG 134

Query: 150 RLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPLWH---------SPEA--R 195
                   + +S  ++   +   M  G +I+  +   + + + H         + EA  +
Sbjct: 135 NFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVCKAALEASVK 194

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPS---------SFSEEESAQFGSEVPMKRAGQPI 246
            LA+ L ++ IRVN ++ GP+ T L  S         ++++  S       P++R     
Sbjct: 195 YLAVDLGKQQIRVNAISAGPVRT-LASSGISDFHYILTWNKYNS-------PLRRNTTLD 246

Query: 247 EVAPCYVFLACNHCSSYITGQVLH 270
           +V    ++L  +      TG+ +H
Sbjct: 247 DVGGAALYL-LSDLGRGTTGETVH 269

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 75.5 bits (186), Expect = 4e-16
 Identities = 58/286 (20%), Positives = 96/286 (33%), Gaps = 66/286 (23%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYV---------KSQEEKDAQETLEI 88
           LRGK A + G   D+G G AVA   A  GA +                +  K  Q  +  
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 89  LREAKTSDAKDPMAISADLGFDENC----------------KRVVDEVVNAYGKIDILVN 132
                      P+    D   D                   +   + V   +G IDILV+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 133 NAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVE 186
             ++      +  + E   +        + +S   +  H L  MN G A I+ T   S  
Sbjct: 126 --SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASER 183

Query: 187 PLWH----------SPEA--RGLALQL-VERGIRVNGVAPGPIWTPLIPS---------S 224
            +            + E+  R LA +   ++ IRVN ++ GP+ +               
Sbjct: 184 IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS-RAAKAIGFIDTMIE 242

Query: 225 FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
           +S   +       P+++     EV     FL  +  +S ITG  ++
Sbjct: 243 YSYNNA-------PIQKTLTADEVGNAAAFL-VSPLASAITGATIY 280

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 74.6 bits (184), Expect = 7e-16
 Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 62/288 (21%)

Query: 23  MEPTPQFTSHDYKPSNK------LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYV 74
           M  +     H      +      L GK  L+TG   +  I   +A     EGA +AFTYV
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYV 60

Query: 75  KSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNA 134
                   ++ +E L             +  D+  D+  K +  E+   +  +D +V++ 
Sbjct: 61  G-----QFKDRVEKLCAEFNPA----AVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSI 111

Query: 135 AVQYKAGSVEEIDEERLERVFRTN------IFSHFF--MTRHSLRHM-NEGSAIINTT-- 183
           A   +    ++++   ++ V R        I ++ F  + +     M N  ++++  T  
Sbjct: 112 AFAPR----DQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYI 167

Query: 184 -SVEPLWH---------SPEA--RGLALQLVERGIRVNGVAPGPIWTPL----IPS---- 223
            + + +           S EA  R  AL L E GI+VN V+ GPI T L    I +    
Sbjct: 168 GAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKT-LAASGISNFKKM 226

Query: 224 -SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
             ++   S       P+K+    +EV     FL C+  ++ ITG+V+H
Sbjct: 227 LDYNAMVS-------PLKKNVDIMEVGNTVAFL-CSDMATGITGEVVH 266

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 53/266 (19%), Positives = 92/266 (34%), Gaps = 46/266 (17%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK  LV+G   DS I   +A     +GA +  T       +  Q   + L        
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF--DRLRLIQRITDRL-------P 55

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYG---KIDILVNNAA----VQYKAGSVEEIDEER 150
                +  D+  +E+   +   V  A G   K+D +V++               +     
Sbjct: 56  AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYAD 115

Query: 151 LERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT----SVEPLWH-------SPEA--RGL 197
           + +    + +S+  M +  L  MN G +I+          P ++       + E+  R +
Sbjct: 116 VSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFV 175

Query: 198 ALQLVERGIRVNGVAPGPIWTPL----IPSSFSEEESAQFGSEV--------PMKR-AGQ 244
           A +  + G+R N VA GPI T L    I      EE+      +        P+      
Sbjct: 176 AREAGKYGVRSNLVAAGPIRT-LAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD 234

Query: 245 PIEVAPCYVFLACNHCSSYITGQVLH 270
              VA     L  +      TG +++
Sbjct: 235 ATPVAKTVCAL-LSDWLPATTGDIIY 259

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 46/278 (16%)

Query: 22  VMEPTPQFTSHDYKPSNKLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEE 79
           ++    +F++        L GK AL+TG   +  I   +A  +  EGA +AFTY      
Sbjct: 1   MLRKLSKFSNKGEVFMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTY---ATP 57

Query: 80  KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK 139
           K  ++ +  + +   SD    + +  D+  DE+ K +   +   +G +DI+V++ A   K
Sbjct: 58  K-LEKRVREIAKGFGSD----LVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPK 112

Query: 140 ---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN-EGSAIINTT---SVEPLWH-- 190
               G V +   E  +     +++S   +TR  L  M     AI+  +   + + + H  
Sbjct: 113 EEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYN 172

Query: 191 -------SPEA--RGLALQLVERGIRVNGVAPGPIWTPL----IPS-----SFSEEESAQ 232
                  + E+  R LA  + + G R+N ++ GP+ T L    I         + + +  
Sbjct: 173 VMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKT-LAAYSITGFHLLMEHTTKVN-- 229

Query: 233 FGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
                P  +     +V    VFL C+  +  ITG+V+H
Sbjct: 230 -----PFGKPITIEDVGDTAVFL-CSDWARAITGEVVH 261

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 72.9 bits (179), Expect = 5e-15
 Identities = 52/298 (17%), Positives = 97/298 (32%), Gaps = 71/298 (23%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           LRGK A V G    +G G A+       GA V             +       E  +  A
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 98  KD----------------------PMAISADLGFDENC----------------KRVVDE 119
           ++                      P+    D   D                     V + 
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEA 126

Query: 120 VVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG 176
           V    G+IDILV+  ++         + +   +       ++ +S   + +H L  M EG
Sbjct: 127 VRADVGQIDILVH--SLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG 184

Query: 177 SAIINTT---SVEPLWH----------SPEA--RGLALQL-VERGIRVNGVAPGPIWTPL 220
            + +  +   S + +            + E+  R LA +    R +RVN ++ GP+ +  
Sbjct: 185 GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS-R 243

Query: 221 IPSSFSEEESAQFGSEV--------PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
             S+  +     F            P+++  +  +V    +FL  +  +  +TG  L+
Sbjct: 244 AASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFL-LSPLARAVTGATLY 300

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 63.0 bits (153), Expect = 1e-11
 Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 48/223 (21%)

Query: 42  GKVALVTG--GDSGIGRAVAHCYALEGATVAFTYV---------KSQEEKDAQETLEILR 90
             +  + G    +G G  +A   +     + F              +  K   + +    
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 91  EAKTSDAKDPMAISADLGFDENC----------------KRVVDEVVNAYGKIDILVNNA 134
           +        P   S D   D +                 + V + +   YGKI++LV+  
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVH-- 119

Query: 135 AVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT---SVEPL 188
           ++         +     +        + +S   + ++ +  M   S+II+ T   S + +
Sbjct: 120 SLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV 179

Query: 189 WH----------SPEA--RGLALQL-VERGIRVNGVAPGPIWT 218
                       + E+  R LA  L     IR+N ++ GP+ +
Sbjct: 180 PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL---REAKTSD 96
              +  ++TG +SG+G   A   A  GATV                  I+      K   
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATV------------------IMAVRDTRKGEA 55

Query: 97  AKDPMAISADLGF---DENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER 153
           A     ++  +     D      V    +     D+L+NNA +         +  +  E 
Sbjct: 56  AAR--TMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGI---MAVPYALTVDGFES 110

Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV 185
              TN   HF +T   L  +     ++  +S+
Sbjct: 111 QIGTNHLGHFALTNLLLPRLT--DRVVTVSSM 140

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 61.8 bits (150), Expect = 2e-11
 Identities = 21/127 (16%), Positives = 41/127 (32%), Gaps = 20/127 (15%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
              ++GK A+V  G   +G   A   A EGA V       ++   AQ   + + +    +
Sbjct: 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLC---GRKLDKAQAAADSVNKRFKVN 170

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                  +A+   D +    V            +    A     G +E + +   +    
Sbjct: 171 -----VTAAETADDASRAEAVKGA-------HFVFTAGA----IG-LELLPQAAWQNESS 213

Query: 157 TNIFSHF 163
             I + +
Sbjct: 214 IEIVADY 220

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 49.8 bits (118), Expect = 3e-07
 Identities = 43/300 (14%), Positives = 73/300 (24%), Gaps = 67/300 (22%)

Query: 35  KPSNKLRGKVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREA 92
           +       K  LV G  SG G A     A      T+   + K      A         A
Sbjct: 54  RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAA 113

Query: 93  KTSDAK----DPMAISADLGFDENCKRVVDEVVNAYG-KIDILVNNAA------------ 135
               AK       +I+ D   D    +V++ +    G ++D++V + A            
Sbjct: 114 FDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEV 173

Query: 136 ------------------------VQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLR 171
                                   +Q         + E    V     +  +        
Sbjct: 174 KRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAG 233

Query: 172 HMNEGSAIINTTSVEPLWHSPE----------------ARGLALQLVERGIRVNGVAPGP 215
            + +G+  +  + +      P                 A+ L  +L + G   N      
Sbjct: 234 VLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKS 293

Query: 216 IWTP---LIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN 272
           + T     IP       S  +     MK  G           L          GQ    +
Sbjct: 294 VVTQASAAIP-VMPLYISMVYK---IMKEKGLHEGTIEQLDRL-FRERLYRQDGQPAEVD 348

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* Length = 405

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 6/108 (5%)

Query: 34  YKPSNKLRGKVALVTGGDSGIGRAVAHCYAL--EGATVAFTYVKSQEEKDAQETLEILRE 91
            +       K  LV G  +G G A     A      T+   + +  EE     +      
Sbjct: 39  TEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSA 98

Query: 92  AKTSDAKDP----MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAA 135
           A    A        +I+ D   DE  +  +D +    G++D ++ + A
Sbjct: 99  AFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLA 146

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 34/213 (15%), Positives = 63/213 (29%), Gaps = 78/213 (36%)

Query: 77  QEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV---DEVVNAYGKIDILVNN 133
            + K  +  L +L      + ++  A +A   F+ +CK ++    + V      D L   
Sbjct: 238 LKSKPYENCLLVLL-----NVQNAKAWNA---FNLSCKILLTTRFKQV-----TDFLSAA 284

Query: 134 AAVQYKAGSVEEI-----DEERLERVFRTNIFSHFF-MTRHSLRHMNEGSAIINTTSVEP 187
                   S++        +E         +   +       L               E 
Sbjct: 285 TTTHI---SLDHHSMTLTPDEVKS------LLLKYLDCRPQDLPR-------------EV 322

Query: 188 LWHSPEARGLALQLVERGIRVNGVAPGPIW-----------TPLIPSSFSEEESAQFGSE 236
           L  +P      L ++   IR +G+A    W           T +I SS +  E       
Sbjct: 323 LTTNP----RRLSIIAESIR-DGLA---TWDNWKHVNCDKLTTIIESSLNVLE------- 367

Query: 237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL 269
                   P E    +  L+    S++I   +L
Sbjct: 368 --------PAEYRKMFDRLSVFPPSAHIPTILL 392

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 3e-04
 Identities = 23/152 (15%), Positives = 58/152 (38%), Gaps = 40/152 (26%)

Query: 78  EEKDAQETLEILREAKTSDAKDPMAISAD------LGFD-------ENCKRVVDEVVNA- 123
           +  D ++  ++ +   + +  D + +S D        F        E  ++ V+EV+   
Sbjct: 31  DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN 90

Query: 124 YGKIDILVNNAAVQYKAGSVEEID-EERLERVFRTN-IFSHFFMTRHSLRHMNEGSAIIN 181
           Y     L++    + +  S+      E+ +R++  N +F+ + ++R              
Sbjct: 91  Y---KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL------------- 134

Query: 182 TTSVEPLWHSPEARGLALQL-VERGIRVNGVA 212
               +P     + R   L+L   + + ++GV 
Sbjct: 135 ----QPYL---KLRQALLELRPAKNVLIDGVL 159

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	272
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.96
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.88
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.88
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.86
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.86
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.86
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.86
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.85
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.85
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.85
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.84
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.84
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.84
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.84
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.84
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.84
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.83
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.83
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.83
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.83
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.83
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.83
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.83
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.82
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.82
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.82
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.82
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.81
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.81
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.81
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.8
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.8
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.8
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.8
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.8
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.79
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.79
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.79
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.78
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.78
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.78
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.78
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.77
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.77
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.77
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.77
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.77
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.76
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.76
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.75
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.75
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.75
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.75
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.74
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.74
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.74
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.74
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.73
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.72
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.72
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.72
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.72
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.72
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.71
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.71
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.71
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.71
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.69
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.68
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.68
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.67
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.66
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.65
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.65
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.64
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.64
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.64
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.64
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.63
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.6
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.56
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.55
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.53
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.51
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.48
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.47
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.46
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.44
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.43
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.36
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.23
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.08
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.89
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.88
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.87
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.79
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.78
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.72
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.67
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.66
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.65
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.58
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.55
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.53
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.49
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.49
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.48
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.44
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.43
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.43
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.41
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.41
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.4
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.39
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.35
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.35
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.33
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.33
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.32
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.3
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.28
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.21
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.2
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.2
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.19
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.18
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.18
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.16
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.09
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.09
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.09
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.08
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	98.04
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.01
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.01
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.99
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.97
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.96
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.94
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.94
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.94
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.91
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.89
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.88
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.87
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.86
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.86
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.85
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.85
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.78
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.77
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.76
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.76
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.75
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.73
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.7
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.67
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.67
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.64
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.63
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.62
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.57
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.57
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.56
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.56
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.56
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.54
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.54
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.54
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.53
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.49
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.49
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.47
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.46
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.43
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.42
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.42
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.36
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.33
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.3
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.29
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.24
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.23
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	97.23
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.22
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.21
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.21
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.2
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.19
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.19
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.17
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.16
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.16
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.14
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.13
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.08
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.08
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.08
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.08
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.07
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.98
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.97
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.95
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.93
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.9
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.81
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.8
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.79
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.77
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.65
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.63
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.57
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.57
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.57
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.55
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.54
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.48
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.46
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.46
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.43
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.43
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.39
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.35
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.28
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.28
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.26
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.24
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.22
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.22
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.21
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.16
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.15
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.09
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.09
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.09
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.07
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.06
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.04
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.0
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.0
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.97
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.96
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.96
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.94
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.9
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.89
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.88
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.83
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.8
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.8
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.79
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.79
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.78
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.78
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.76
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.75
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	95.74
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.72
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.68
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.68
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	95.66
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	95.64
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.62
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.62
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.61
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.61
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.61
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.59
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.58
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.58
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.57
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.54
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	95.53

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2.4e-51  Score=344.57  Aligned_cols=227  Identities=28%  Similarity=0.429  Sum_probs=201.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+   .+.+++..+++.+    .+.++.++++|+++++++++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~---~~~~~~~~~~i~~----~g~~~~~~~~Dvt~~~~v~~~~   75 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL---EDRLNQIVQELRG----MGKEVLGVKADVSKKKDVEEFV   75 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHH
Confidence            47999999999999999999999999999999999998   4455556666655    5778999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+.....++.+.+.++|+++|++|+.|+|+++|+++|+|++  +|+||++||.++..+.+.  
T Consensus        76 ~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~  155 (254)
T 4fn4_A           76 RRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGA  155 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCH
T ss_pred             HHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCCh
Confidence            9999999999999999998665678999999999999999999999999999999965  589999999998877665  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH--HHHH-hhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE--EESA-QFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                  +++||.||+++|||||+|+||+|+|+|......+  .... ......|++|+.+|+|||++++||+|+
T Consensus       156 ~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd  235 (254)
T 4fn4_A          156 PYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASD  235 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence                        7999999999999999999999999987554332  2222 233446789999999999999999999


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.|+|||+|.+|
T Consensus       236 ~-a~~iTG~~i~VD  248 (254)
T 4fn4_A          236 E-ASFVNGDAVVVD  248 (254)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             h-hcCCcCCEEEeC
Confidence            8 999999999998

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.4e-51  Score=346.20  Aligned_cols=228  Identities=28%  Similarity=0.405  Sum_probs=204.8

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..++|+||++|||||++|||+++|+.|+++|++|++++|+   .+.+++..+++.+    .+.++.++++|+++++++++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~---~~~~~~~~~~l~~----~g~~~~~~~~Dv~~~~~v~~   75 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIR---ATLLAESVDTLTR----KGYDAHGVAFDVTDELAIEA   75 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC---HHHHHHHHHHHHH----TTCCEEECCCCTTCHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHH
Confidence            3578999999999999999999999999999999999998   4555566666655    56789999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+|+++|+++|+|++   +|+||++||.++..+.+
T Consensus        76 ~~~~~~~~~G~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~  154 (255)
T 4g81_D           76 AFSKLDAEGIHVDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP  154 (255)
T ss_dssp             HHHHHHHTTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT
T ss_pred             HHHHHHHHCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC
Confidence            99999999999999999999954 589999999999999999999999999999999942   58999999999888776


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              ++++|.||+++|||||+|+||+|+|++..... .++..+.+...+|++|+.+|+|||+.++||+|
T Consensus       155 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S  234 (255)
T 4g81_D          155 TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSS  234 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence            5              79999999999999999999999999875433 23445667788999999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.|+|||+|.+|
T Consensus       235 ~~-a~~iTG~~i~VD  248 (255)
T 4g81_D          235 KA-SDYINGQIIYVD  248 (255)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             ch-hCCCcCCEEEEC
Confidence            98 999999999998

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=7.4e-51  Score=344.75  Aligned_cols=226  Identities=30%  Similarity=0.437  Sum_probs=195.5

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           35 KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        35 ~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .|..+|+||++|||||++|||+++|+.|+++|++|++++|+.   +.+.+..+++       +.++.++++|++++++++
T Consensus        22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~---~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~   91 (273)
T 4fgs_A           22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRK---DVLDAAIAEI-------GGGAVGIQADSANLAELD   91 (273)
T ss_dssp             ---CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHH-------CTTCEEEECCTTCHHHHH
T ss_pred             hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHc-------CCCeEEEEecCCCHHHHH
Confidence            456679999999999999999999999999999999999983   4444444443       567889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++++.+++|+||+||||||+. ...++.+.+.++|+++|++|+.|+|+++++++|+|+++|+||+++|.++..+.+. 
T Consensus        92 ~~~~~~~~~~G~iDiLVNNAG~~-~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~  170 (273)
T 4fgs_A           92 RLYEKVKAEAGRIDVLFVNAGGG-SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF  170 (273)
T ss_dssp             HHHHHHHHHHSCEEEEEECCCCC-CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC-CCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc
Confidence            99999999999999999999985 4589999999999999999999999999999999999999999999998887766 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH------HHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE------EESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                                   ++++|.||+++|||||+|+||+|+|++.......      +..+.+...+|++|+.+|+|||++++|
T Consensus       171 ~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~F  250 (273)
T 4fgs_A          171 SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence                         7999999999999999999999999987654322      223456678999999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+. +.|+|||+|.+|
T Consensus       251 LaSd~-a~~iTG~~i~VD  267 (273)
T 4fgs_A          251 LASDD-SSFVTGAELFVD  267 (273)
T ss_dssp             HHSGG-GTTCCSCEEEES
T ss_pred             HhCch-hcCccCCeEeEC
Confidence            99998 999999999998

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.8e-49  Score=333.37  Aligned_cols=226  Identities=28%  Similarity=0.405  Sum_probs=194.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      |.++|+||++|||||++|||+++|+.|+++|++|++++|+.+..+.+    +++.+    .+.++.++.+|+++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~----~~~~~----~~~~~~~~~~Dv~~~~~v~~   72 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFL----DALAQ----RQPRATYLPVELQDDAQCRD   72 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH----HHHHH----HCTTCEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH----HHHHh----cCCCEEEEEeecCCHHHHHH
Confidence            45789999999999999999999999999999999999986654322    23332    46788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++++.+++|++|+||||||+..  ....+.+.++|++.+++|+.++++++++++|+|++ +|+||++||.++..+.+. 
T Consensus        73 ~v~~~~~~~G~iDiLVNnAGi~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~  150 (258)
T 4gkb_A           73 AVAQTIATFGRLDGLVNNAGVND--GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT  150 (258)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC--CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC
T ss_pred             HHHHHHHHhCCCCEEEECCCCCC--CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc
Confidence            99999999999999999999853  33447899999999999999999999999999965 699999999988777655 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-----HHHHHhhccCCCCC-CCCCccchhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMK-RAGQPIEVAPCYVF  254 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~dva~~~~~  254 (272)
                                   ++++|.|++++|||||+|+||+|+|++......     ++..+.+...+|++ |+.+|+|||++++|
T Consensus       151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~f  230 (258)
T 4gkb_A          151 SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVF  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence                         799999999999999999999999999865332     23345567788885 89999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+. +.|+|||+|.+|
T Consensus       231 LaS~~-a~~iTG~~i~VD  247 (258)
T 4gkb_A          231 LLSPR-ASHTTGEWLFVD  247 (258)
T ss_dssp             HHSGG-GTTCCSCEEEES
T ss_pred             HhCch-hcCccCCeEEEC
Confidence            99998 999999999998

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=8.9e-49  Score=325.70  Aligned_cols=213  Identities=31%  Similarity=0.419  Sum_probs=186.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+..+.             ....++..+.+|++++++++++++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------------~~~~~~~~~~~Dv~~~~~v~~~~~   74 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------------PRHPRIRREELDITDSQRLQRLFE   74 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------------CCCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------------hhcCCeEEEEecCCCHHHHHHHHH
Confidence            3699999999999999999999999999999999998554321             145678899999999999887765


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~----  193 (272)
                          ++|++|+||||||+.   .++.+.+.++|++++++|+.++|+++|+++|+|++ +|+||++||.++..+.+.    
T Consensus        75 ----~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y  147 (242)
T 4b79_A           75 ----ALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAY  147 (242)
T ss_dssp             ----HCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHH
T ss_pred             ----hcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHH
Confidence                579999999999984   46788999999999999999999999999999965 699999999998877665    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                +|++|.||+++|||||+|+||+|+|+|...... ++..+.+.+.+|++|+.+|+|||++++||+|+. +.
T Consensus       148 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~-a~  226 (242)
T 4b79_A          148 SASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPG-AS  226 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG-GT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch-hc
Confidence                      799999999999999999999999999866543 455677888999999999999999999999998 99


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      |+|||+|.+|
T Consensus       227 ~iTG~~l~VD  236 (242)
T 4b79_A          227 FVTGAVLAVD  236 (242)
T ss_dssp             TCCSCEEEES
T ss_pred             CccCceEEEC
Confidence            9999999998

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.2e-49  Score=329.99  Aligned_cols=220  Identities=27%  Similarity=0.385  Sum_probs=193.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+..+     +..+++.+    .+.++.++.+|++|+++++++
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~-----~~~~~~~~----~g~~~~~~~~Dv~d~~~v~~~   74 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-----ETLDIIAK----DGGNASALLIDFADPLAAKDS   74 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH-----HHHHHHHH----TTCCEEEEECCTTSTTTTTTS
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH-----HHHHHHHH----hCCcEEEEEccCCCHHHHHHH
Confidence            468999999999999999999999999999999999997432     22333433    577899999999999998887


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++     ++++|+||||||+.. ..++.+.+.++|+++|++|+.|+|+++|+++|.|++   +|+||++||..+..+.+.
T Consensus        75 ~~-----~g~iDiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~  148 (247)
T 4hp8_A           75 FT-----DAGFDILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR  148 (247)
T ss_dssp             ST-----TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS
T ss_pred             HH-----hCCCCEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC
Confidence            74     489999999999954 579999999999999999999999999999999853   589999999988877665


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +|++|.||+++|||||+|+||+|+|+|..... .++..+.+.+.+|++|+.+|+|||++++||+|+
T Consensus       149 ~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd  228 (247)
T 4hp8_A          149 VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSA  228 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSG
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence                          79999999999999999999999999975432 234456677899999999999999999999999


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ++|+|||+|.+|
T Consensus       229 ~-a~~iTG~~i~VD  241 (247)
T 4hp8_A          229 A-ADYVHGAILNVD  241 (247)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             h-hcCCcCCeEEEC
Confidence            8 999999999998

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=7.9e-48  Score=325.48  Aligned_cols=229  Identities=24%  Similarity=0.309  Sum_probs=202.2

Q ss_pred             CCCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +++|+||++|||||+|  |||+++|+.|+++|++|++++|+.+..+.+.+.++++      .+.++.++++|++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~   74 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL------NQPEAHLYQIDVQSDEEVI   74 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG------TCSSCEEEECCTTCHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCCcEEEEEccCCCHHHHH
Confidence            4689999999999875  9999999999999999999999865555544433321      3567899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS  191 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~  191 (272)
                      ++++++.+++|++|+||||||+...   ..++.+.+.++|...+++|+.+++.+++.+.++|+++|+||++||.++..+.
T Consensus        75 ~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~  154 (256)
T 4fs3_A           75 NGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV  154 (256)
T ss_dssp             HHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc
Confidence            9999999999999999999997532   3467789999999999999999999999999999999999999999988777


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      +.              +++||.||+++|||||+|+||+++|++...... ++..+.+.+.+|++|+.+|+|||++++||+
T Consensus       155 ~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~  234 (256)
T 4fs3_A          155 QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLL  234 (256)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            65              799999999999999999999999999866544 345567788899999999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      |+. +.|+|||+|.+|
T Consensus       235 Sd~-a~~iTG~~i~VD  249 (256)
T 4fs3_A          235 SDL-SSGVTGENIHVD  249 (256)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Cch-hcCccCCEEEEC
Confidence            998 999999999998

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.7e-47  Score=317.84  Aligned_cols=210  Identities=21%  Similarity=0.366  Sum_probs=184.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|+||||||++|||+++|+.|+++|++|++++|+.+.   +.+    +.+    ...++.++++|++++++++++++++.
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~---~~~----~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~   70 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKR---SAD----FAK----ERPNLFYFHGDVADPLTLKKFVEYAM   70 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHH----HHT----TCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHH----HHH----hcCCEEEEEecCCCHHHHHHHHHHHH
Confidence            6999999999999999999999999999999997432   222    221    45678899999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-------  193 (272)
                      +++|++|+||||||+.. ..++.+.+.++|++++++|+.++|++++++.|+|++ +|+||++||..+..+.+.       
T Consensus        71 ~~~g~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~as  149 (247)
T 3ged_A           71 EKLQRIDVLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASA  149 (247)
T ss_dssp             HHHSCCCEEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHH
Confidence            99999999999999854 579999999999999999999999999999999965 699999999998888766       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccc
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG  266 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG  266 (272)
                             ++++|.||++ |||||+|+||+++|++..+..     +.....+|++|+.+|+|||++++||+|+   .|+||
T Consensus       150 Kaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~-----~~~~~~~Pl~R~g~pediA~~v~fL~s~---~~iTG  220 (247)
T 3ged_A          150 KGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT-----QEDCAAIPAGKVGTPKDISNMVLFLCQQ---DFITG  220 (247)
T ss_dssp             HHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CC-----HHHHHTSTTSSCBCHHHHHHHHHHHHHC---SSCCS
T ss_pred             HHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH-----HHHHhcCCCCCCcCHHHHHHHHHHHHhC---CCCCC
Confidence                   7999999997 999999999999999864432     2334568999999999999999999984   49999


Q ss_pred             eeeccC
Q 039897          267 QVLHPN  272 (272)
Q Consensus       267 ~~i~id  272 (272)
                      |+|.+|
T Consensus       221 ~~i~VD  226 (247)
T 3ged_A          221 ETIIVD  226 (247)
T ss_dssp             CEEEES
T ss_pred             CeEEEC
Confidence            999998

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=3e-47  Score=321.84  Aligned_cols=217  Identities=25%  Similarity=0.364  Sum_probs=190.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+...                 ...+..++++|+++++++++++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------------~~~~~~~~~~Dv~~~~~v~~~~   69 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE-----------------GLPEELFVEADLTTKEGCAIVA   69 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TSCTTTEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-----------------CCCcEEEEEcCCCCHHHHHHHH
Confidence            57999999999999999999999999999999999997432                 2334568999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+++|++|+||||||+... ..++.+.+.++|++++++|+.++++++++++|+|++  +|+||+++|..+..+.+. 
T Consensus        70 ~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~  149 (261)
T 4h15_A           70 EATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES  149 (261)
T ss_dssp             HHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT
T ss_pred             HHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc
Confidence            9999999999999999998543 357899999999999999999999999999999965  589999999987766542 


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC---------CC----HHHHHhhccCCCCCCCCCcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS---------FS----EEESAQFGSEVPMKRAGQPI  246 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~---------~~----~~~~~~~~~~~~~~~~~~~~  246 (272)
                                    ++++|.||+++|||||+|+||+|+|++....         ..    .+........+|++|+.+|+
T Consensus       150 ~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe  229 (261)
T 4h15_A          150 TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPE  229 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHH
Confidence                          7999999999999999999999999975321         11    12233456789999999999


Q ss_pred             chhhhhhhhhccCCCCcccceeeccC
Q 039897          247 EVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       247 dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |||+.++||+|+. +.|+|||+|.+|
T Consensus       230 evA~~v~fLaS~~-a~~itG~~i~VD  254 (261)
T 4h15_A          230 EVANLIAFLASDR-AASITGAEYTID  254 (261)
T ss_dssp             HHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHHHHhCch-hcCccCcEEEEC
Confidence            9999999999998 999999999998

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=3.5e-45  Score=314.91  Aligned_cols=257  Identities=50%  Similarity=0.855  Sum_probs=222.2

Q ss_pred             CCcccccCCCCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHH
Q 039897            9 PPQKQEAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI   88 (272)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~   88 (272)
                      |..-....|+....|.+.+.+..+++....+|+||++|||||++|||++++++|+++|++|++++|+....  .....+.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~~   91 (291)
T 3ijr_A           14 PAQHQNKQPGIESLMNPLPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGD--ANETKQY   91 (291)
T ss_dssp             CCCCCSSSSCCGGGCSSCCCCCCTTCCCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHHHHH
T ss_pred             CcccCccccchhccCCCCccccccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH--HHHHHHH
Confidence            44455556667777888888888888888899999999999999999999999999999999999985432  2222222


Q ss_pred             HHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHH
Q 039897           89 LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRH  168 (272)
Q Consensus        89 ~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  168 (272)
                      +.+    .+.++.++.+|++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.++++++++
T Consensus        92 ~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  167 (291)
T 3ijr_A           92 VEK----EGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKA  167 (291)
T ss_dssp             HHT----TTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHh----cCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence            222    5678899999999999999999999999999999999999866556788999999999999999999999999


Q ss_pred             HHhccccCCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhc
Q 039897          169 SLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG  234 (272)
Q Consensus       169 ~~~~~~~~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~  234 (272)
                      ++|+|+++++||++||..+..+.+.              +++++.|++++||+||+|+||+|+|++.......+....+.
T Consensus       168 ~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~  247 (291)
T 3ijr_A          168 ALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG  247 (291)
T ss_dssp             HHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTT
T ss_pred             HHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHH
Confidence            9999998899999999987766543              68999999999999999999999999875555566667778


Q ss_pred             cCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       235 ~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ...|.+++.+|+|+|++++||+++. +.++||++|++|
T Consensus       248 ~~~p~~r~~~p~dvA~~v~~L~s~~-~~~itG~~i~vd  284 (291)
T 3ijr_A          248 SNVPMQRPGQPYELAPAYVYLASSD-SSYVTGQMIHVN  284 (291)
T ss_dssp             TTSTTSSCBCGGGTHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             ccCCCCCCcCHHHHHHHHHHHhCCc-cCCCcCCEEEEC
Confidence            8899999999999999999999998 899999999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.5e-44  Score=309.95  Aligned_cols=250  Identities=40%  Similarity=0.687  Sum_probs=211.1

Q ss_pred             CCCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcC
Q 039897           17 PGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD   96 (272)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~   96 (272)
                      |.....+.|.|.....++....+|+||++|||||++|||++++++|+++|++|++++++... ....+..+.+.+    .
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~~~~~~~----~   98 (294)
T 3r3s_A           24 PGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEE-EDAQQVKALIEE----C   98 (294)
T ss_dssp             TCCGGGSSSCCCCSTTTCCCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGH-HHHHHHHHHHHH----T
T ss_pred             ccccccCCCCccccccCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch-hHHHHHHHHHHH----c
Confidence            34444455666555556666788999999999999999999999999999999999886332 223333333333    5


Q ss_pred             CCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC
Q 039897           97 AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG  176 (272)
Q Consensus        97 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  176 (272)
                      +.++.++.+|++++++++++++++.+.++++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|+++
T Consensus        99 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~  178 (294)
T 3r3s_A           99 GRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG  178 (294)
T ss_dssp             TCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence            67889999999999999999999999999999999999986555678999999999999999999999999999999989


Q ss_pred             CeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCC-CCCCCHHHHHhhccCCCCCC
Q 039897          177 SAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLI-PSSFSEEESAQFGSEVPMKR  241 (272)
Q Consensus       177 g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~-~~~~~~~~~~~~~~~~~~~~  241 (272)
                      |+||++||..+..+.+.              +++++.|++++||+||+|+||+|+|++. ......+....+....|.++
T Consensus       179 g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r  258 (294)
T 3r3s_A          179 ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKR  258 (294)
T ss_dssp             CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSS
T ss_pred             CEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCC
Confidence            99999999988877654              7899999999999999999999999873 22233444556677889999


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.+|+|+|++++||+++. +.++||++|++|
T Consensus       259 ~~~p~dvA~~v~~L~s~~-~~~itG~~i~vd  288 (294)
T 3r3s_A          259 AGQPAELAPVYVYLASQE-SSYVTAEVHGVC  288 (294)
T ss_dssp             CBCGGGGHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             CcCHHHHHHHHHHHhCcc-ccCCCCCEEEEC
Confidence            999999999999999998 899999999987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.4e-44  Score=307.91  Aligned_cols=247  Identities=30%  Similarity=0.415  Sum_probs=198.2

Q ss_pred             CCCCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhc
Q 039897           16 QPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS   95 (272)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~   95 (272)
                      .|++.+++...+.....+..|..+|++|++|||||++|||+++|++|+++|++|++++|+...   +.+..+++.+    
T Consensus         2 ~~~~~~~~~~~~~~~~gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~----   74 (270)
T 3ftp_A            2 AHHHHHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAG---AEGIGAAFKQ----   74 (270)
T ss_dssp             ---------------------CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHHH----
T ss_pred             CCCCccccccccCCCCCCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----
Confidence            367778888888888888888889999999999999999999999999999999999998544   3333444433    


Q ss_pred             CCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc
Q 039897           96 DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE  175 (272)
Q Consensus        96 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  175 (272)
                      .+.++.++.+|++|+++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++
T Consensus        75 ~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~  153 (270)
T 3ftp_A           75 AGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMK  153 (270)
T ss_dssp             HTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            3567889999999999999999999999999999999999854 467888999999999999999999999999999854


Q ss_pred             --CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC
Q 039897          176 --GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM  239 (272)
Q Consensus       176 --~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~  239 (272)
                        .|+||++||.++..+.+.              +++++.|++++||+||+|+||+|+|++... ...+....+....|+
T Consensus       154 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p~  232 (270)
T 3ftp_A          154 ARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTALKTQIPL  232 (270)
T ss_dssp             HTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHHHTTCTT
T ss_pred             cCCCEEEEECchhhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHHHhcCCC
Confidence              589999999877766544              689999999999999999999999998643 345555667778899


Q ss_pred             CCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          240 KRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++.+|+|+|++++||+++. +.++||++|++|
T Consensus       233 ~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vd  264 (270)
T 3ftp_A          233 GRLGSPEDIAHAVAFLASPQ-AGYITGTTLHVN  264 (270)
T ss_dssp             CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             CCCCCHHHHHHHHHHHhCCC-cCCccCcEEEEC
Confidence            99999999999999999988 889999999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1e-43  Score=300.29  Aligned_cols=227  Identities=30%  Similarity=0.484  Sum_probs=200.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..+|+||++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++.+    .+.++.++.+|++|++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~   78 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEG---AEAVAAAIRQ----AGGKAIGLECNVTDEQHREA   78 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHH---HHHHHHHHHH----TTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCcEEEEECCCCCHHHHHH
Confidence            3567999999999999999999999999999999999998544   4444444443    56788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.++++|+||||||+.. ..++ +.+.++|++++++|+.++++++++++|+|++  .|+||++||.++..+.+.
T Consensus        79 ~~~~~~~~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  156 (256)
T 3gaf_A           79 VIKAALDQFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR  156 (256)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC
Confidence            99999999999999999999865 3566 8899999999999999999999999999965  579999999988777654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|++++||+||+|+||+++|++......++....+....|++++.+|+|+|++++||+++.
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~  236 (256)
T 3gaf_A          157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPA  236 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence                          789999999999999999999999998755445666667778899999999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|++|
T Consensus       237 -~~~itG~~i~vd  248 (256)
T 3gaf_A          237 -AAWISGQVLTVS  248 (256)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -ccCccCCEEEEC
Confidence             899999999987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=6.8e-43  Score=299.79  Aligned_cols=232  Identities=27%  Similarity=0.409  Sum_probs=195.9

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc-------------chhhhHHHHHHHHHHhhhcCCCCce
Q 039897           35 KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS-------------QEEKDAQETLEILREAKTSDAKDPM  101 (272)
Q Consensus        35 ~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~  101 (272)
                      +|..+|+||++|||||++|||+++|++|+++|++|++++|+.             +..+.+.+..+++..    .+.++.
T Consensus         4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~   79 (286)
T 3uve_A            4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG----HNRRIV   79 (286)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT----TTCCEE
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh----cCCceE
Confidence            456779999999999999999999999999999999999872             224455555555443    567889


Q ss_pred             EEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCe
Q 039897          102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSA  178 (272)
Q Consensus       102 ~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~  178 (272)
                      ++.+|++++++++++++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++   .|+
T Consensus        80 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~  159 (286)
T 3uve_A           80 TAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGS  159 (286)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             EEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcE
Confidence            99999999999999999999999999999999998665445889999999999999999999999999999965   579


Q ss_pred             EEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC------------CCHHHH--
Q 039897          179 IINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS------------FSEEES--  230 (272)
Q Consensus       179 iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~------------~~~~~~--  230 (272)
                      ||++||..+..+.+.              +++++.|++++||+||+|+||+|+|++....            ...+..  
T Consensus       160 iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T 3uve_A          160 IILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAP  239 (286)
T ss_dssp             EEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred             EEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHH
Confidence            999999988877654              7899999999999999999999999987431            111111  


Q ss_pred             -HhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          231 -AQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       231 -~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                       .......| +++.+|+|+|++++||+++. +.++||++|++|
T Consensus       240 ~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~-a~~itG~~i~vd  280 (286)
T 3uve_A          240 ICQMFHTLP-IPWVEPIDISNAVLFFASDE-ARYITGVTLPID  280 (286)
T ss_dssp             HHHTTCSSS-CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHhhhccC-CCcCCHHHHHHHHHHHcCcc-ccCCcCCEEeEC
Confidence             12445666 88899999999999999998 899999999997

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-43  Score=300.10  Aligned_cols=227  Identities=30%  Similarity=0.455  Sum_probs=188.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +.+++|++|||||++|||+++|++|+++|++|++++++..  +.+++..+++..    .+.++.++.+|+++++++++++
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~   96 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA--AAAEEVAGKIEA----AGGKALTAQADVSDPAAVRRLF   96 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS--HHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHH
Confidence            4578999999999999999999999999999999865433  233333444443    5678899999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++|+||++||..+..+.+.    
T Consensus        97 ~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  175 (267)
T 3u5t_A           97 ATAEEAFGGVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIY  175 (267)
T ss_dssp             HHHHHHHSCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHH
Confidence            999999999999999999954 478899999999999999999999999999999988899999999876655543    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.|++++||+||+|+||+|+|++......++..+.+....|++++.+|+|+|++++||+++. +.+
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~-~~~  254 (267)
T 3u5t_A          176 AAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPD-GAW  254 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTT-TTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-ccC
Confidence                      789999999999999999999999999765545555666778899999999999999999999988 899


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      +||++|++|
T Consensus       255 itG~~i~vd  263 (267)
T 3u5t_A          255 VNGQVLRAN  263 (267)
T ss_dssp             CCSEEEEES
T ss_pred             ccCCEEEeC
Confidence            999999987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=6.4e-44  Score=302.56  Aligned_cols=230  Identities=23%  Similarity=0.365  Sum_probs=194.6

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..++|+||++|||||++|||+++|++|+++|++|++++|..++.+.+.+..+++..    .+.++.++.+|+++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~   80 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED----QGAKVALYQSDLSNEEEVAK   80 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT----TTCEEEEEECCCCSHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHH
Confidence            34679999999999999999999999999999999999887777777777776654    46678999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++|+||++||..+..+.+.  
T Consensus        81 ~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~  159 (262)
T 3ksu_A           81 LFDFAEKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYS  159 (262)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCc
Confidence            99999999999999999999865 478889999999999999999999999999999988899999999855433221  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.|++++||+||+|+||+|+|++.......+....+....|.+++.+|+|+|++++||+++  +
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~--~  237 (262)
T 3ksu_A          160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD--G  237 (262)
T ss_dssp             C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTT--T
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC--C
Confidence                        78999999999999999999999999875544444555566778999999999999999999986  6


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||++|++|
T Consensus       238 ~~itG~~i~vd  248 (262)
T 3ksu_A          238 WWINGQTIFAN  248 (262)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCccCCEEEEC
Confidence            79999999987

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=4.9e-43  Score=298.38  Aligned_cols=229  Identities=33%  Similarity=0.511  Sum_probs=197.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..+|+||++|||||++|||++++++|+++|++|++++++..  +.+.+..+++.+    .+.++.++.+|+++++++++
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~   85 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST--KDAEKVVSEIKA----LGSDAIAIKADIRQVPEIVK   85 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHH
Confidence            346799999999999999999999999999999999887633  334444445544    56788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC-CccCChh-
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE-PLWHSPE-  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~-~~~~~~~-  193 (272)
                      +++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++|+||++||.. ...+.+. 
T Consensus        86 ~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  164 (270)
T 3is3_A           86 LFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKH  164 (270)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCC
Confidence            99999999999999999999964 57889999999999999999999999999999999999999999987 4444333 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCC-----------CCCHHHHHhhccCCCCCCCCCccchh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-----------SFSEEESAQFGSEVPMKRAGQPIEVA  249 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~dva  249 (272)
                                   +++++.|++++||+||+|+||+|+|++...           ...++....+....|++++.+|+|+|
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  244 (270)
T 3is3_A          165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVA  244 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHH
Confidence                         789999999999999999999999998631           11233344556678999999999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++||+++. +.++||++|++|
T Consensus       245 ~~v~~L~s~~-~~~itG~~i~vd  266 (270)
T 3is3_A          245 NVVGFLVSKE-GEWVNGKVLTLD  266 (270)
T ss_dssp             HHHHHHTSGG-GTTCCSCEEEES
T ss_pred             HHHHHHcCCc-cCCccCcEEEeC
Confidence            9999999988 899999999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-43  Score=300.58  Aligned_cols=229  Identities=25%  Similarity=0.387  Sum_probs=199.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      |...|+||++|||||++|||++++++|+++|++|++++|+..   .+.+..+++.+    .+.++.++.+|+++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~   77 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVE---RLEDVAKQVTD----TGRRALSVGTDITDDAQVAH   77 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHH----TTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHH---HHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHH
Confidence            556799999999999999999999999999999999999844   44444455544    56788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++++.+.++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++ +|+||++||..+..+.+. 
T Consensus        78 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  157 (264)
T 3ucx_A           78 LVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKY  157 (264)
T ss_dssp             HHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTC
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCcc
Confidence            999999999999999999998655678999999999999999999999999999999965 689999999988776654 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----------CHHHHHhhccCCCCCCCCCccchhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                                   +++++.|++++||+||+|+||+|+|++.....          .++..+.+....|.+++.+|+|+|+
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~  237 (264)
T 3ucx_A          158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVAS  237 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHH
Confidence                         68999999999999999999999998753221          1333455677889999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+++. +.++||++|++|
T Consensus       238 ~v~~L~s~~-~~~itG~~i~vd  258 (264)
T 3ucx_A          238 AILFMASDL-ASGITGQALDVN  258 (264)
T ss_dssp             HHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHcCcc-ccCCCCCEEEEC
Confidence            999999988 899999999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=6.4e-43  Score=301.89  Aligned_cols=244  Identities=27%  Similarity=0.375  Sum_probs=196.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc---------hhhhHHHHHHHHHHhh
Q 039897           23 MEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ---------EEKDAQETLEILREAK   93 (272)
Q Consensus        23 ~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~---------~~~~~~~~~~~~~~~~   93 (272)
                      +-..|+..+++..|..+|+||++|||||++|||+++|++|+++|++|++++|+..         +.+.+.+...++..  
T Consensus         9 ~~~~~~~~~~p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   86 (299)
T 3t7c_A            9 MGTLEAQTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA--   86 (299)
T ss_dssp             -------------CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH--
T ss_pred             ccceeccCCCCcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh--
Confidence            3344555556666778899999999999999999999999999999999998732         24455555555554  


Q ss_pred             hcCCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc
Q 039897           94 TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM  173 (272)
Q Consensus        94 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  173 (272)
                        .+.++.++.+|++++++++++++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|
T Consensus        87 --~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  164 (299)
T 3t7c_A           87 --LGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHI  164 (299)
T ss_dssp             --TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             --cCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence              567899999999999999999999999999999999999986654458899999999999999999999999999998


Q ss_pred             cc---CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-----------
Q 039897          174 NE---GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-----------  225 (272)
Q Consensus       174 ~~---~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-----------  225 (272)
                      ++   .|+||++||.++..+.+.              +++++.|++++||+||+|+||+|+|++.....           
T Consensus       165 ~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  244 (299)
T 3t7c_A          165 MAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLEN  244 (299)
T ss_dssp             HHTTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSS
T ss_pred             HhcCCCcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhcc
Confidence            43   479999999988776654              78999999999999999999999999874310           


Q ss_pred             -CHHH---HHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          226 -SEEE---SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       226 -~~~~---~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                       ..+.   ........| +++.+|+|+|++++||+++. +.++||++|++|
T Consensus       245 ~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~-a~~itG~~i~vd  293 (299)
T 3t7c_A          245 PTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDD-ARYITGVSLPVD  293 (299)
T ss_dssp             CCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             chhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcc-cccCcCCEEeeC
Confidence             0111   112334455 78889999999999999998 899999999997

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=7.1e-43  Score=298.27  Aligned_cols=226  Identities=30%  Similarity=0.454  Sum_probs=196.5

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..++|+||++|||||++|||++++++|+++|++|++++|+....+.+   .+++..    .+.++.++.+|+++++++++
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~~~~----~~~~~~~~~~Dl~d~~~v~~   98 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVV---ADEIAG----VGGKALPIRCDVTQPDQVRG   98 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH---HHHHHH----TTCCCEEEECCTTCHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHh----cCCeEEEEEcCCCCHHHHHH
Confidence            35679999999999999999999999999999999999986554444   344433    46788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   +++||++||..+.....
T Consensus        99 ~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~  177 (276)
T 3r1i_A           99 MLDQMTGELGGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI  177 (276)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC
Confidence            99999999999999999999864 468889999999999999999999999999999965   37899999987654321


Q ss_pred             --h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          193 --E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       193 --~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                        .              +++++.|++++||+||+|+||+|+|++....  .+....+....|++++.+|+|+|++++||+
T Consensus       178 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  255 (276)
T 3r1i_A          178 PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL--ADYHALWEPKIPLGRMGRPEELTGLYLYLA  255 (276)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG--GGGHHHHGGGSTTSSCBCGGGSHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence              1              7899999999999999999999999997542  234455677889999999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|++|
T Consensus       256 s~~-~~~itG~~i~vd  270 (276)
T 3r1i_A          256 SAA-SSYMTGSDIVID  270 (276)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Ccc-ccCccCcEEEEC
Confidence            988 899999999987

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-42  Score=296.44  Aligned_cols=227  Identities=26%  Similarity=0.395  Sum_probs=197.4

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           35 KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        35 ~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .|..+|+||++|||||++|||++++++|+++|++|++++|+....+..   .+++       +.++.++.+|++++++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-------~~~~~~~~~Dv~~~~~v~   73 (271)
T 3tzq_B            4 SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA---AASV-------GRGAVHHVVDLTNEVSVR   73 (271)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH---HHHH-------CTTCEEEECCTTCHHHHH
T ss_pred             CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHh-------CCCeEEEECCCCCHHHHH
Confidence            355679999999999999999999999999999999999986554333   2222       457889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS  191 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~  191 (272)
                      ++++++.+.+|++|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|+|++  .++||++||..+..+.
T Consensus        74 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  153 (271)
T 3tzq_B           74 ALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY  153 (271)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC
Confidence            9999999999999999999998633 457889999999999999999999999999999965  5799999999887665


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      +.              +++++.|++++||+||+|+||+|+|++.......+....+....|.+++.+|+|+|++++||++
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s  233 (271)
T 3tzq_B          154 DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLAS  233 (271)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            44              7899999999999999999999999998755666677777888999999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|++|
T Consensus       234 ~~-~~~itG~~i~vd  247 (271)
T 3tzq_B          234 DR-AAFITGQVIAAD  247 (271)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             cc-cCCcCCCEEEEC
Confidence            88 899999999987

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=5e-43  Score=294.75  Aligned_cols=223  Identities=34%  Similarity=0.483  Sum_probs=194.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +++++||++|||||++|||+++|++|+++|++|++++|+...   +.+..+++.       .+..++.+|++|+++++++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~   73 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYLG-------DNGKGMALNVTNPESIEAV   73 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHG-------GGEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhc-------ccceEEEEeCCCHHHHHHH
Confidence            467899999999999999999999999999999999998443   333333332       2357899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+.+. 
T Consensus        74 ~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  152 (248)
T 3op4_A           74 LKAITDEFGGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ  152 (248)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC
Confidence            9999999999999999999865 478899999999999999999999999999999954  589999999877666544 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.|++++||+||+|+||+++|++... ..++....+....|.+++.+|+|+|++++||+++. 
T Consensus       153 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~-  230 (248)
T 3op4_A          153 ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-LNDEQRTATLAQVPAGRLGDPREIASAVAFLASPE-  230 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT-SCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG-
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc-
Confidence                         789999999999999999999999999754 34555566677889999999999999999999988 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++||++|++|
T Consensus       231 ~~~itG~~i~vd  242 (248)
T 3op4_A          231 AAYITGETLHVN  242 (248)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cCCccCcEEEEC
Confidence            899999999987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=8.2e-43  Score=300.79  Aligned_cols=233  Identities=18%  Similarity=0.271  Sum_probs=198.4

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCC
Q 039897           31 SHDYKPSNKLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLG  108 (272)
Q Consensus        31 ~~~~~~~~~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (272)
                      +.++.++++|+||++|||||+|  |||+++|++|+++|++|++++|+.+..+.+.+..+.        .+.+.++.+|++
T Consensus        19 p~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~   90 (296)
T 3k31_A           19 PGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES--------LGVKLTVPCDVS   90 (296)
T ss_dssp             --CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------HTCCEEEECCTT
T ss_pred             CccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh--------cCCeEEEEcCCC
Confidence            3345566789999999999997  999999999999999999999985544433333222        234688999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          109 FDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      ++++++++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|+|+++|+||++||.
T Consensus        91 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~  170 (296)
T 3k31_A           91 DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY  170 (296)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence            9999999999999999999999999998642   2678899999999999999999999999999999889999999998


Q ss_pred             CCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhh
Q 039897          186 EPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       186 ~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                      .+..+.+.              +++++.|++++||+||+|+||+|+|++...... .+....+....|++++.+|+|+|+
T Consensus       171 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  250 (296)
T 3k31_A          171 GAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGG  250 (296)
T ss_dssp             GGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred             hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            87766544              789999999999999999999999998754322 233445666789999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+++. +.++||++|++|
T Consensus       251 ~v~fL~s~~-a~~itG~~i~vd  271 (296)
T 3k31_A          251 AALYLLSDL-GRGTTGETVHVD  271 (296)
T ss_dssp             HHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHcCCc-cCCccCCEEEEC
Confidence            999999988 889999999987

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.2e-43  Score=299.27  Aligned_cols=229  Identities=26%  Similarity=0.378  Sum_probs=192.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+..   .+.+..+++..    .+.++.++.+|++|++++++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~   94 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRT---EVEEVADEIVG----AGGQAIALEADVSDELQMRN   94 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHTT----TTCCEEEEECCTTCHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHh----cCCcEEEEEccCCCHHHHHH
Confidence            356789999999999999999999999999999999999843   34444444432    46778999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc--CC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW--HS  191 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~--~~  191 (272)
                      +++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.++..  +.
T Consensus        95 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~  174 (283)
T 3v8b_A           95 AVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT  174 (283)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC
Confidence            999999999999999999998655578899999999999999999999999999999965  58999999988766  33


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHH-----HHhhccCCCC--CCCCCccchh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEE-----SAQFGSEVPM--KRAGQPIEVA  249 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~-----~~~~~~~~~~--~~~~~~~dva  249 (272)
                      +.              +++++.|++++||+||+|+||+|+|++...... .+.     ........|.  +++.+|+|+|
T Consensus       175 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA  254 (283)
T 3v8b_A          175 PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVA  254 (283)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHH
Confidence            32              789999999999999999999999999755321 121     1223445666  8899999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++||+++. +.++||++|.+|
T Consensus       255 ~~v~fL~s~~-a~~itG~~i~vd  276 (283)
T 3v8b_A          255 ELIRFLVSER-ARHVTGSPVWID  276 (283)
T ss_dssp             HHHHHHTSGG-GTTCCSCEEEES
T ss_pred             HHHHHHcCcc-ccCCcCCEEEEC
Confidence            9999999998 899999999987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-42  Score=296.21  Aligned_cols=226  Identities=34%  Similarity=0.468  Sum_probs=195.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|+||++|||||++|||+++|++|+++|++|++++++..  +.+.+..+++.+    .+.++.++.+|++++++++++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~--~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~   99 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA--ERAQAVVSEIEQ----AGGRAVAIRADNRDAEAIEQA   99 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHH
Confidence            45799999999999999999999999999999999977642  334444445544    567889999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-Chh--
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-SPE--  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-~~~--  193 (272)
                      ++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.|.|+++|+||++||..+... .+.  
T Consensus       100 ~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~  178 (271)
T 3v2g_A          100 IRETVEALGGLDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGIS  178 (271)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCH
T ss_pred             HHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCch
Confidence            9999999999999999999864 478899999999999999999999999999999998999999999755443 232  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.|++++||+||+|+||+|+|++.....  +..+......|.+++.+|+|+|++++||+++. +
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~-~  255 (271)
T 3v2g_A          179 LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIATGSYGEPQDIAGLVAWLAGPQ-G  255 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG-G
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc-c
Confidence                        78999999999999999999999999975432  23344556789999999999999999999988 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||++|++|
T Consensus       256 ~~itG~~i~vd  266 (271)
T 3v2g_A          256 KFVTGASLTID  266 (271)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCccCCEEEeC
Confidence            99999999987

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=3.7e-43  Score=298.49  Aligned_cols=241  Identities=31%  Similarity=0.436  Sum_probs=188.6

Q ss_pred             CCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCC
Q 039897           18 GKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA   97 (272)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~   97 (272)
                      ...+.+++.+.....+.. +.+|+||++|||||++|||+++|++|+++|++|++++|+...   +.+..++       .+
T Consensus         4 ~~~~~~~~~~~~~~g~~~-m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~-------~~   72 (266)
T 3grp_A            4 HHHHHMGTLEAQTQGPGS-MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDK---LKEIAAD-------LG   72 (266)
T ss_dssp             -----------------C-TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHH-------HC
T ss_pred             CCccccccccCCCCCCcc-hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------hC
Confidence            344555555555555543 568999999999999999999999999999999999997433   3333222       25


Q ss_pred             CCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--
Q 039897           98 KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--  175 (272)
Q Consensus        98 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--  175 (272)
                      .++.++.+|++|+++++++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  
T Consensus        73 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  151 (266)
T 3grp_A           73 KDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR  151 (266)
T ss_dssp             SSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            57889999999999999999999999999999999999854 467888999999999999999999999999999965  


Q ss_pred             CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCC
Q 039897          176 GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKR  241 (272)
Q Consensus       176 ~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
                      .|+||++||..+..+.+.              +++++.|++++||+||+|+||+|+|++... ..++..+.+....|.++
T Consensus       152 ~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~r  230 (266)
T 3grp_A          152 YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIPMKR  230 (266)
T ss_dssp             CEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCTTCS
T ss_pred             CcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCCCCC
Confidence            589999999988776654              689999999999999999999999998644 34556666778899999


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.+|+|+|++++||+++. +.++||++|++|
T Consensus       231 ~~~~edvA~~v~~L~s~~-~~~itG~~i~vd  260 (266)
T 3grp_A          231 MGIGEEIAFATVYLASDE-AAYLTGQTLHIN  260 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             CcCHHHHHHHHHHHhCcc-ccCccCCEEEEC
Confidence            999999999999999988 889999999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.6e-43  Score=298.02  Aligned_cols=228  Identities=29%  Similarity=0.412  Sum_probs=197.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+..   .+.+..+++..    .+.++.++.+|++++++++++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~   75 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGN---ALAELTDEIAG----GGGEAAALAGDVGDEALHEAL   75 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHH---HHHHHHHHHTT----TTCCEEECCCCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHH
Confidence            35689999999999999999999999999999999999844   34444444432    467889999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCc-cCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL-WHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~-~~~~~  193 (272)
                      ++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||..+. .+.+.
T Consensus        76 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (280)
T 3tox_A           76 VELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG  155 (280)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC
Confidence            99999999999999999998655678899999999999999999999999999999976  5799999998876 44333


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---CHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                                    +++++.|++++||+||+|+||+|+|++.....   .++....+....|++++.+|+|+|++++||+
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  235 (280)
T 3tox_A          156 VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA  235 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHh
Confidence                          78999999999999999999999999864422   3455556677889999999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|++|
T Consensus       236 s~~-a~~itG~~i~vd  250 (280)
T 3tox_A          236 SDG-ASFVTGAALLAD  250 (280)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Ccc-ccCCcCcEEEEC
Confidence            988 889999999987

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.1e-43  Score=298.95  Aligned_cols=231  Identities=28%  Similarity=0.398  Sum_probs=199.5

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           34 YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        34 ~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      +..+++|+||++|||||++|||++++++|+++|++|++++|+....   .+..+++.+.   .+.++.++.+|++|++++
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~l~~~---~~~~~~~~~~Dv~~~~~v   85 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSEL---DAARRALGEQ---FGTDVHTVAIDLAEPDAP   85 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHHHHH---HCCCEEEEECCTTSTTHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHHh---cCCcEEEEEecCCCHHHH
Confidence            3345679999999999999999999999999999999999985443   3334444321   356789999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWH  190 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~  190 (272)
                      +++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.|.|++   +|+||++||..+..+
T Consensus        86 ~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (266)
T 4egf_A           86 AELARRAAEAFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP  164 (266)
T ss_dssp             HHHHHHHHHHHTSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC
Confidence            9999999999999999999999965 478889999999999999999999999999999965   479999999988777


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .+.              +++++.|++++||+||+|+||+|+|++..... ..+....+....|++++.+|+|+|++++||
T Consensus       165 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L  244 (266)
T 4egf_A          165 LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWL  244 (266)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            654              78999999999999999999999999754322 234455667788999999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|++|
T Consensus       245 ~s~~-~~~itG~~i~vd  260 (266)
T 4egf_A          245 ASDA-ASMINGVDIPVD  260 (266)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             hCch-hcCccCcEEEEC
Confidence            9998 899999999987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=3.7e-43  Score=299.27  Aligned_cols=227  Identities=28%  Similarity=0.420  Sum_probs=198.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.   +.+.+..+++.+    .+.++.++.+|++++++++++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~   93 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP---SRVAQTVQEFRN----VGHDAEAVAFDVTSESEIIEA   93 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH---HHHHHHHHHHHH----TTCCEEECCCCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHH
Confidence            4679999999999999999999999999999999999974   444444555544    467789999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.+. 
T Consensus        94 ~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~  172 (271)
T 4ibo_A           94 FARLDEQGIDVDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATV  172 (271)
T ss_dssp             HHHHHHHTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC
T ss_pred             HHHHHHHCCCCCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCc
Confidence            9999999999999999999854 478899999999999999999999999999999965  479999999988776654 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   +++++.|++++||+||+|+||+|+|++..... .++..+.+....|.+++.+|+|+|++++||+++.
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~  252 (271)
T 4ibo_A          173 APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASA  252 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence                         78999999999999999999999999864321 2344455667789999999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|++|
T Consensus       253 -~~~itG~~i~vd  264 (271)
T 4ibo_A          253 -SDYVNGQIIYVD  264 (271)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -ccCCCCcEEEEC
Confidence             899999999987

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-42  Score=294.44  Aligned_cols=227  Identities=26%  Similarity=0.433  Sum_probs=198.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +++|+||++|||||++|||++++++|+++|++|++++|+.+   .+.+..+++.+.   ...++.++.+|++++++++++
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~v~~~   78 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTA---DIDACVADLDQL---GSGKVIGVQTDVSDRAQCDAL   78 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHTT---SSSCEEEEECCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhh---CCCcEEEEEcCCCCHHHHHHH
Confidence            46799999999999999999999999999999999999844   344444444431   236789999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCc-cCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL-WHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~-~~~~~  193 (272)
                      ++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+. .+.+.
T Consensus        79 ~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  157 (262)
T 3pk0_A           79 AGRAVEEFGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG  157 (262)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTT
T ss_pred             HHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCC
Confidence            9999999999999999999854 478899999999999999999999999999999965  5899999998875 44433


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|++++||+||+|+||++.|++... ..++....+....|.+++.+|+|+|++++||+++.
T Consensus       158 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~  236 (262)
T 3pk0_A          158 WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPAGALGTPEDIGHLAAFLATKE  236 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence                          789999999999999999999999997644 34555667778899999999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|++|
T Consensus       237 -~~~itG~~i~vd  248 (262)
T 3pk0_A          237 -AGYITGQAIAVD  248 (262)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -ccCCcCCEEEEC
Confidence             899999999987

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=6e-43  Score=301.07  Aligned_cols=239  Identities=27%  Similarity=0.427  Sum_probs=198.6

Q ss_pred             CCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEe
Q 039897           25 PTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS  104 (272)
Q Consensus        25 ~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (272)
                      ..+...+.+...+++|++|++|||||++|||++++++|+++|++|++++|+....+.   ..+++.+.   ...++.++.
T Consensus        24 ~~~~~~~~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~---~~~~l~~~---~~~~~~~~~   97 (293)
T 3rih_A           24 VVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSS---VTAELGEL---GAGNVIGVR   97 (293)
T ss_dssp             ----------CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH---HHHHHTTS---SSSCEEEEE
T ss_pred             eecCCCCcccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---HHHHHHhh---CCCcEEEEE
Confidence            333334444455778999999999999999999999999999999999998655443   33444321   225788999


Q ss_pred             ccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEe
Q 039897          105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINT  182 (272)
Q Consensus       105 ~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~v  182 (272)
                      +|++++++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++  .++||++
T Consensus        98 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~i  176 (293)
T 3rih_A           98 LDVSDPGSCADAARTVVDAFGALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILT  176 (293)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEE
T ss_pred             EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            9999999999999999999999999999999864 478889999999999999999999999999999965  5899999


Q ss_pred             cCCCCc-cCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccc
Q 039897          183 TSVEPL-WHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIE  247 (272)
Q Consensus       183 sS~~~~-~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  247 (272)
                      ||..+. .+.+.              +++++.|++++||+||+|+||+|.|++... ..++....+....|.+++.+|+|
T Consensus       177 sS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~r~~~p~d  255 (293)
T 3rih_A          177 SSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGMARSIPMGMLGSPVD  255 (293)
T ss_dssp             CCSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHHHTTSTTSSCBCHHH
T ss_pred             eChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHHHhcCCCCCCCCHHH
Confidence            998875 44443              789999999999999999999999987643 23455566777899999999999


Q ss_pred             hhhhhhhhhccCCCCcccceeeccC
Q 039897          248 VAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       248 va~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +|++++||+++. +.++||++|++|
T Consensus       256 vA~~v~fL~s~~-a~~itG~~i~vd  279 (293)
T 3rih_A          256 IGHLAAFLATDE-AGYITGQAIVVD  279 (293)
T ss_dssp             HHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHHHhCcc-ccCCCCCEEEEC
Confidence            999999999998 899999999987

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.2e-42  Score=299.41  Aligned_cols=228  Identities=25%  Similarity=0.307  Sum_probs=190.8

Q ss_pred             CCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           36 PSNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ++.+|+||++|||||+  +|||+++|++|+++|++|++++|+.+..+.+    +++.+    ...++.++.+|+++++++
T Consensus        25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~----~~~~~----~~~~~~~~~~Dv~d~~~v   96 (293)
T 3grk_A           25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV----EPLAE----ELGAFVAGHCDVADAASI   96 (293)
T ss_dssp             --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH----HHHHH----HHTCEEEEECCTTCHHHH
T ss_pred             ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH----HHHHH----hcCCceEEECCCCCHHHH
Confidence            3567999999999999  5599999999999999999999974322222    22222    123578899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH  190 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~  190 (272)
                      +++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|+|+++|+||++||..+..+
T Consensus        97 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~  176 (293)
T 3grk_A           97 DAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV  176 (293)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC
Confidence            99999999999999999999998642   467889999999999999999999999999999998999999999987766


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .+.              +++++.|++++||+||+|+||+|+|++...... .+....+....|++++.+|+|+|++++||
T Consensus       177 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  256 (293)
T 3grk_A          177 MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYF  256 (293)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            544              789999999999999999999999998765433 34445566778999999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|++|
T Consensus       257 ~s~~-~~~itG~~i~vd  272 (293)
T 3grk_A          257 LSDL-SRSVTGEVHHAD  272 (293)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             cCcc-ccCCcceEEEEC
Confidence            9988 899999999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-42  Score=296.73  Aligned_cols=231  Identities=28%  Similarity=0.396  Sum_probs=194.3

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc----------hhhhHHHHHHHHHHhhhcCCCCceEEe
Q 039897           35 KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ----------EEKDAQETLEILREAKTSDAKDPMAIS  104 (272)
Q Consensus        35 ~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (272)
                      .|+.+|+||++|||||++|||+++|++|+++|++|++++|+.+          +.+.+.+..+++..    .+.++.++.
T Consensus         4 ~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   79 (277)
T 3tsc_A            4 SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA----ANRRIVAAV   79 (277)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEE
T ss_pred             ccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----cCCeEEEEE
Confidence            4567899999999999999999999999999999999998422          34555555555544    567889999


Q ss_pred             ccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEE
Q 039897          105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIIN  181 (272)
Q Consensus       105 ~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~  181 (272)
                      +|++|+++++++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   .|+||+
T Consensus        80 ~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~  158 (277)
T 3tsc_A           80 VDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIIL  158 (277)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            9999999999999999999999999999999965 468889999999999999999999999999999965   479999


Q ss_pred             ecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----------CHHHHHhhccCC
Q 039897          182 TTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEV  237 (272)
Q Consensus       182 vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~~~  237 (272)
                      +||..+..+.+.              +++++.|++++||+||+|+||+|+|++.....          .++....+....
T Consensus       159 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (277)
T 3tsc_A          159 ISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFL  238 (277)
T ss_dssp             ECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSS
T ss_pred             EccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhcc
Confidence            999988776654              78999999999999999999999999864310          111122234445


Q ss_pred             CCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          238 PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       238 ~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |. ++.+|+|+|++++||+++. +.++||++|++|
T Consensus       239 p~-r~~~pedvA~~v~~L~s~~-~~~itG~~i~vd  271 (277)
T 3tsc_A          239 PD-WVAEPEDIADTVCWLASDE-SRKVTAAQIPVD  271 (277)
T ss_dssp             SC-SCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             CC-CCCCHHHHHHHHHHHhCcc-ccCCcCCEEeeC
Confidence            55 7889999999999999998 899999999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=9.7e-43  Score=294.80  Aligned_cols=227  Identities=29%  Similarity=0.426  Sum_probs=181.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++++..  +...+..+++.+    .+.++.++.+|+++++++++++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~   77 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAA--EGAATAVAEIEK----LGRSALAIKADLTNAAEVEAAI   77 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSC--HHHHHHHHHHHT----TTSCCEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHHHh----cCCceEEEEcCCCCHHHHHHHH
Confidence            5689999999999999999999999999999999955432  233344444443    4677899999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc-cCChh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL-WHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~-~~~~~---  193 (272)
                      +++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|+++|+||++||..+. .+.+.   
T Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  157 (259)
T 3edm_A           78 SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALA  157 (259)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHH
T ss_pred             HHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHH
Confidence            99999999999999999986556788999999999999999999999999999999888999999998766 33332   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 +++++.|+++. |+||+|+||+|+|++......++..+.+....|++++.+|+|+|++++||+++. +.
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~-~~  235 (259)
T 3edm_A          158 YATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDD-AA  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHSGG-GT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc-cc
Confidence                       68999999887 999999999999999866544555566777889999999999999999999998 89


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      ++||++|++|
T Consensus       236 ~itG~~i~vd  245 (259)
T 3edm_A          236 YVTGACYDIN  245 (259)
T ss_dssp             TCCSCEEEES
T ss_pred             CccCCEEEEC
Confidence            9999999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=5.5e-43  Score=297.27  Aligned_cols=228  Identities=27%  Similarity=0.370  Sum_probs=192.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++...  ....++.++.+|+++++++++++
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~   78 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGER---LRAAESALRQR--FPGARLFASVCDVLDALQVRAFA   78 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH--STTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHh--cCCceEEEEeCCCCCHHHHHHHH
Confidence            56899999999999999999999999999999999998444   44444444331  13445889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..+.+.  
T Consensus        79 ~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  157 (265)
T 3lf2_A           79 EACERTLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMV  157 (265)
T ss_dssp             HHHHHHHCSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCch
Confidence            999999999999999999854 578889999999999999999999999999999976  589999999988877655  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--------CHHHHHh-hc--cCCCCCCCCCccchhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--------SEEESAQ-FG--SEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--------~~~~~~~-~~--~~~~~~~~~~~~dva~  250 (272)
                                  +++++.|++++||+||+|+||+|+|++.....        ..+.... ..  ...|++++.+|+|+|+
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  237 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAAR  237 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHH
Confidence                        78999999999999999999999998753211        1111111 11  2389999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+++. +.++||++|++|
T Consensus       238 ~v~fL~s~~-~~~itG~~i~vd  258 (265)
T 3lf2_A          238 AILFLASPL-SAYTTGSHIDVS  258 (265)
T ss_dssp             HHHHHHSGG-GTTCCSEEEEES
T ss_pred             HHHHHhCch-hcCcCCCEEEEC
Confidence            999999988 899999999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1e-42  Score=297.52  Aligned_cols=229  Identities=26%  Similarity=0.362  Sum_probs=196.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ...+|+||++|||||++|||++++++|+++|++|++++|+...   +.+..+++...   .+.++.++.+|+++++++++
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~   94 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPR---VLTAARKLAGA---TGRRCLPLSMDVRAPPAVMA   94 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHH---HHHHHHHHHHH---HSSCEEEEECCTTCHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHH
Confidence            3456999999999999999999999999999999999998443   33444444321   35678999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+..+.+.
T Consensus        95 ~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  173 (277)
T 4fc7_A           95 AVDQALKEFGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL  173 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT
T ss_pred             HHHHHHHHcCCCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC
Confidence            99999999999999999999854 478889999999999999999999999999999854  689999999977766543


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCC--CCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS--SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                    +++++.|++++||+||+|+||+|.|++...  ....+....+....|++++.+|+|+|++++||++
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s  253 (277)
T 4fc7_A          174 QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLAS  253 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcC
Confidence                          789999999999999999999999985321  1134445566678899999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|++|
T Consensus       254 ~~-~~~itG~~i~vd  267 (277)
T 4fc7_A          254 PL-ASYVTGAVLVAD  267 (277)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             Cc-cCCcCCCEEEEC
Confidence            88 889999999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-42  Score=295.64  Aligned_cols=229  Identities=31%  Similarity=0.431  Sum_probs=177.8

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ++.++++|++|||||++|||+++|++|+++|++|++++++.  .+.+.+..+++..    .+.++.++.+|++|++++++
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~   96 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD--AEGVAPVIAELSG----LGARVIFLRADLADLSSHQA   96 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC--HHHHHHHHHHHHH----TTCCEEEEECCTTSGGGHHH
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHH
Confidence            45678999999999999999999999999999999999743  3344444555544    46788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccccc-CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCcc
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLW  189 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~  189 (272)
                      +++++.+.+|++|+||||||+. ....++.+.+.++|++++++|+.++++++++++|.|++     .|+||++||..+..
T Consensus        97 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~  176 (280)
T 4da9_A           97 TVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM  176 (280)
T ss_dssp             HHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----
T ss_pred             HHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc
Confidence            9999999999999999999984 23468889999999999999999999999999999965     57999999998877


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhcc-CCCCCCCCCccchhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-EVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~  254 (272)
                      +.+.              +++++.|++++||+||+|+||+|+|++..... ++....... ..|.+++.+|+|+|++++|
T Consensus       177 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~  255 (280)
T 4da9_A          177 TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS-GKYDGLIESGLVPMRRWGEPEDIGNIVAG  255 (280)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------CCBCHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc-hhHHHHHhhcCCCcCCcCCHHHHHHHHHH
Confidence            6554              68999999999999999999999999875432 222223333 6789999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|++|
T Consensus       256 L~s~~-~~~itG~~i~vd  272 (280)
T 4da9_A          256 LAGGQ-FGFATGSVIQAD  272 (280)
T ss_dssp             HHTST-TGGGTTCEEEES
T ss_pred             HhCcc-ccCCCCCEEEEC
Confidence            99998 899999999987

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.8e-42  Score=293.14  Aligned_cols=225  Identities=30%  Similarity=0.435  Sum_probs=194.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+..   .+.+..+++       ..++.++.+|+++++++++
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~   71 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIE---RARQAAAEI-------GPAAYAVQMDVTRQDSIDA   71 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHH-------CTTEEEEECCTTCHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHh-------CCCceEEEeeCCCHHHHHH
Confidence            456799999999999999999999999999999999999743   333333332       4467889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   +|+||++||..+..+.+
T Consensus        72 ~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  150 (259)
T 4e6p_A           72 AIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA  150 (259)
T ss_dssp             HHHHHHHHSSSCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC
Confidence            99999999999999999999854 468889999999999999999999999999999965   57999999998887765


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----------CCHHHHHhhccCCCCCCCCCccch
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----------FSEEESAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dv  248 (272)
                      .              +++++.|++++||+||+|+||+++|++....          ...+....+....|.+++.+|+|+
T Consensus       151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv  230 (259)
T 4e6p_A          151 LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDL  230 (259)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHH
Confidence            4              7899999999999999999999999975321          133444556677899999999999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |++++||+++. +.++||++|++|
T Consensus       231 a~~v~~L~s~~-~~~itG~~i~vd  253 (259)
T 4e6p_A          231 TGMAIFLASAE-SDYIVSQTYNVD  253 (259)
T ss_dssp             HHHHHHTTSGG-GTTCCSCEEEES
T ss_pred             HHHHHHHhCCc-cCCCCCCEEEEC
Confidence            99999999988 899999999987

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.4e-42  Score=297.22  Aligned_cols=233  Identities=25%  Similarity=0.352  Sum_probs=196.5

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           35 KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        35 ~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .|..++++|++|||||++|||++++++|+++|++|++++|+..   .+.+..+++.+... ...++.++.+|++++++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~-~~~~~~~~~~Dv~~~~~v~   79 (281)
T 3svt_A            4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPD---KLAGAVQELEALGA-NGGAIRYEPTDITNEDETA   79 (281)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHTTCC-SSCEEEEEECCTTSHHHHH
T ss_pred             CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHHhCC-CCceEEEEeCCCCCHHHHH
Confidence            4567899999999999999999999999999999999999844   44444455543211 1236888999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~  192 (272)
                      ++++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||.++..+.+
T Consensus        80 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  159 (281)
T 3svt_A           80 RAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR  159 (281)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC
Confidence            9999999999999999999998555678899999999999999999999999999999965  57999999987766554


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-CCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++++.|++++||+||+|+||+|+|++.... ...+....+....|++++.+|+|+|++++||++
T Consensus       160 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s  239 (281)
T 3svt_A          160 WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLS  239 (281)
T ss_dssp             TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHS
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            3              7899999999999999999999999986432 123445556677899999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|++|
T Consensus       240 ~~-~~~itG~~~~vd  253 (281)
T 3svt_A          240 DA-ASFVTGQVINVD  253 (281)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             cc-cCCCCCCEEEeC
Confidence            88 889999999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=5.1e-42  Score=291.94  Aligned_cols=225  Identities=32%  Similarity=0.481  Sum_probs=194.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+++++|++|||||++|||+++|++|+++|++|++++++.  .+.+.+..+++..    .+.++.++.+|++|+++++++
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~v~~~   96 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASS--AGAADEVVAAIAA----AGGEAFAVKADVSQESEVEAL   96 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHH
Confidence            3568999999999999999999999999999999998853  2334444444443    467889999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||.++..+.+. 
T Consensus        97 ~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  175 (269)
T 4dmm_A           97 FAAVIERWGRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ  175 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc
Confidence            9999999999999999999854 468889999999999999999999999999999965  589999999877665543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.|++++||+||+|+||+|+|++...    ...+.+....|++++.+|+|+|++++||++++.
T Consensus       176 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~  251 (269)
T 4dmm_A          176 ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----LAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPA  251 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH----HHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc----ccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcc
Confidence                         688999999999999999999999998632    233556677899999999999999999999832


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++||++|++|
T Consensus       252 ~~~itG~~i~vd  263 (269)
T 4dmm_A          252 AAYITGQVINID  263 (269)
T ss_dssp             GGGCCSCEEEES
T ss_pred             cCCCcCCEEEEC
Confidence            889999999987

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.4e-42  Score=291.82  Aligned_cols=223  Identities=31%  Similarity=0.432  Sum_probs=190.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++       +.++.++.+|+++++++++++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~   71 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEG---AKAAAASI-------GKKARAIAADISDPGSVKALF   71 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHH---HHHHHHHH-------CTTEEECCCCTTCHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHh-------CCceEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998433   33333332       457889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++   .++||++||..+..+.+. 
T Consensus        72 ~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  150 (247)
T 3rwb_A           72 AEIQALTGGIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNM  150 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTC
T ss_pred             HHHHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCc
Confidence            999999999999999999854 578899999999999999999999999999999965   479999999887666554 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.|++++||+||+|+||+|+|++.................++++..+|+|+|+.++||+++. 
T Consensus       151 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~-  229 (247)
T 3rwb_A          151 AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD-  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGG-
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCcc-
Confidence                         789999999999999999999999997654322222222222368889999999999999999998 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++||++|++|
T Consensus       230 ~~~itG~~i~vd  241 (247)
T 3rwb_A          230 ARWITGQTLNVD  241 (247)
T ss_dssp             GTTCCSCEEEES
T ss_pred             ccCCCCCEEEEC
Confidence            899999999987

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=5.8e-42  Score=289.90  Aligned_cols=224  Identities=24%  Similarity=0.337  Sum_probs=194.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +++|++|||||++|||++++++|+++|++|+++ +|+.   +.+.+..+++.+    .+.++.++.+|++++++++++++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~---~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   74 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK---KAALETAEEIEK----LGVKVLVVKANVGQPAKIKEMFQ   74 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHH
Confidence            368999999999999999999999999999997 6663   334444444443    46688999999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.+.   
T Consensus        75 ~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  153 (258)
T 3oid_A           75 QIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTT  153 (258)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHH
Confidence            99999999999999999854 478899999999999999999999999999999976  479999999988776554   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                 +++++.|++++||+||+|+||+++|++....... +..+.+....|.+++.+|+|+|++++||+++. +
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~-~  232 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSK-A  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSST-T
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-c
Confidence                       7899999999999999999999999987654433 33455667789999999999999999999998 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||++|++|
T Consensus       233 ~~itG~~i~vd  243 (258)
T 3oid_A          233 DMIRGQTIIVD  243 (258)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCccCCEEEEC
Confidence            99999999987

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=5.1e-42  Score=289.74  Aligned_cols=223  Identities=30%  Similarity=0.380  Sum_probs=192.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++       +.++.++.+|++|+++++++
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~   72 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESN---IARIREEF-------GPRVHALRSDIADLNEIAVL   72 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHH-------GGGEEEEECCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHh-------CCcceEEEccCCCHHHHHHH
Confidence            346899999999999999999999999999999999998443   33333322       34678999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|+++|+||++||.++..+.+.   
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  151 (255)
T 4eso_A           73 GAAAGQTLGAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSV  151 (255)
T ss_dssp             HHHHHHHHSSEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHH
T ss_pred             HHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchH
Confidence            9999999999999999999954 478899999999999999999999999999999988899999999988877654   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-CCHHH----HHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-FSEEE----SAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                 +++++.|++++||+||+|+||+++|++.... ..+..    ........|.+++.+|+|+|++++||++
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  231 (255)
T 4eso_A          152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcC
Confidence                       7899999999999999999999999986542 22222    2334556899999999999999999998


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +  +.++||++|++|
T Consensus       232 ~--~~~itG~~i~vd  244 (255)
T 4eso_A          232 E--ATFTTGAKLAVD  244 (255)
T ss_dssp             T--CTTCCSCEEEES
T ss_pred             c--CcCccCCEEEEC
Confidence            6  679999999987

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=8.9e-42  Score=286.73  Aligned_cols=224  Identities=35%  Similarity=0.516  Sum_probs=196.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +.+|++|||||++|||++++++|+++|++|++++++.  .+.+.+..+++..    .+.++.++.+|++|++++++++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~   75 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS--KEKAEAVVEEIKA----KGVDSFAIQANVADADEVKAMIKE   75 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHH
Confidence            5689999999999999999999999999999988853  2334444444544    467788999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||.++..+.+.    
T Consensus        76 ~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  154 (246)
T 3osu_A           76 VVSQFGSLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANY  154 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHH
Confidence            9999999999999999864 467889999999999999999999999999999954  589999999877666544    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.|++++||+||+|+||++.|++... ..++..+.+....|.+++.+|+|+|++++||+++. +.+
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~-~~~  232 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPLARFGQDTDIANTVAFLASDK-AKY  232 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG-GTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-ccC
Confidence                      689999999999999999999999999754 45566667778899999999999999999999988 899


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      +||++|++|
T Consensus       233 itG~~i~vd  241 (246)
T 3osu_A          233 ITGQTIHVN  241 (246)
T ss_dssp             CCSCEEEES
T ss_pred             CCCCEEEeC
Confidence            999999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.2e-42  Score=290.00  Aligned_cols=226  Identities=27%  Similarity=0.440  Sum_probs=192.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|+++++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~   74 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK---LEEAKLEIEQ----FPGQILTVQMDVRNTDDIQKMI   74 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHCC----STTCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHH
Confidence            35889999999999999999999999999999999998443   3333444332    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc-cc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM-NE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+| ++  .|+||++||..+..+.+. 
T Consensus        75 ~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  153 (257)
T 3imf_A           75 EQIDEKFGRIDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV  153 (257)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc
Confidence            999999999999999999854 4788999999999999999999999999999998 33  589999999988776654 


Q ss_pred             -------------HHHHHHHHh-hCCeEEEEEecccccCCCCCCCC--CHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 -------------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSF--SEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -------------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                   +++++.|++ ++||+||+|+||+|+|++.....  .++....+....|.+++.+|+|+|++++||++
T Consensus       154 ~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  233 (257)
T 3imf_A          154 IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCS  233 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence                         689999997 77999999999999999764321  22223445567899999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|++|
T Consensus       234 ~~-~~~itG~~i~vd  247 (257)
T 3imf_A          234 DE-AAYINGTCMTMD  247 (257)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             ch-hcCccCCEEEEC
Confidence            88 889999999987

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.8e-41  Score=287.91  Aligned_cols=229  Identities=31%  Similarity=0.427  Sum_probs=188.1

Q ss_pred             CCCCCCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           36 PSNKLRGKVALVTGGD-SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas-~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .++++++|++|||||+ +|||++++++|+++|++|++++|+.+.   +.+..+++.+.   ...++.++.+|++++++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~   89 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERR---LGETRDQLADL---GLGRVEAVVCDVTSTEAVD   89 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHTT---CSSCEEEEECCTTCHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHH---HHHHHHHHHhc---CCCceEEEEeCCCCHHHHH
Confidence            4567999999999998 599999999999999999999998544   44444444321   3468899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHS  191 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~  191 (272)
                      ++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++   .++||++||..+..+.
T Consensus        90 ~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  168 (266)
T 3o38_A           90 ALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ  168 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC
T ss_pred             HHHHHHHHHhCCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC
Confidence            999999999999999999999854 478889999999999999999999999999999964   4789999998887765


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      +.              +++++.|++++||+||+|+||+|+|++.......+..+.+....+.+++.+|+|+|++++||++
T Consensus       169 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s  248 (266)
T 3o38_A          169 HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLAS  248 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHS
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence            54              6889999999999999999999999998665555666667778899999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|++|
T Consensus       249 ~~-~~~~tG~~i~vd  262 (266)
T 3o38_A          249 DY-SSYMTGEVVSVS  262 (266)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             cc-ccCccCCEEEEc
Confidence            87 889999999987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.1e-42  Score=292.48  Aligned_cols=230  Identities=27%  Similarity=0.395  Sum_probs=187.2

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+.+|++|++|||||++|||+++|++|+++|++|++++|+.  .+.+.+..+++...   .+.++.++.+|+++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~   93 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA--PDEIRTVTDEVAGL---SSGTVLHHPADMTKPSEIAD   93 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC--HHHHHHHHHHHHTT---CSSCEEEECCCTTCHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHhhc---cCCcEEEEeCCCCCHHHHHH
Confidence            35679999999999999999999999999999999999853  23334444444321   35678899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||.++..+.+.
T Consensus        94 ~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  172 (281)
T 3v2h_A           94 MMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF  172 (281)
T ss_dssp             HHHHHHHHTSSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC
Confidence            99999999999999999999854 478889999999999999999999999999999965  489999999988777654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHH-----------HHhhccCCCCCCCCCccch
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE-----------SAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~dv  248 (272)
                                    +++++.|++++||+||+|+||+|+|++.........           .+.+....|.+++.+|+|+
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edv  252 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQV  252 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHH
Confidence                          789999999999999999999999998754332111           1235567899999999999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |++++||+++. +.++||++|++|
T Consensus       253 A~~v~~L~s~~-a~~itG~~i~vd  275 (281)
T 3v2h_A          253 ASLALYLAGDD-AAQITGTHVSMD  275 (281)
T ss_dssp             HHHHHHHHSSG-GGGCCSCEEEES
T ss_pred             HHHHHHHcCCC-cCCCCCcEEEEC
Confidence            99999999998 889999999987

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.4e-41  Score=290.48  Aligned_cols=225  Identities=32%  Similarity=0.503  Sum_probs=193.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+...   +.+..++       .+.++.++.+|+++++++++
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~   90 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDA---AVRVANE-------IGSKAFGVRVDVSSAKDAES   90 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHH-------HCTTEEEEECCTTCHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------hCCceEEEEecCCCHHHHHH
Confidence            4567999999999999999999999999999999999998433   3333322       24578899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||..+..+.+.
T Consensus        91 ~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  169 (277)
T 4dqx_A           91 MVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD  169 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC
Confidence            99999999999999999999854 468889999999999999999999999999999976  479999999988777654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCC-----CCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-----SFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                                    +++++.|++++||+||+|+||+|+|++...     ....+....+....|.+++.+|+|+|++++|
T Consensus       170 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~  249 (277)
T 4dqx_A          170 RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLF  249 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHH
Confidence                          689999999999999999999999997321     1112223346678899999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|++|
T Consensus       250 L~s~~-~~~itG~~i~vd  266 (277)
T 4dqx_A          250 LASDR-SRFATGSILTVD  266 (277)
T ss_dssp             HHSGG-GTTCCSCEEEES
T ss_pred             HhCCc-cCCCcCCEEEEC
Confidence            99988 889999999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-41  Score=290.20  Aligned_cols=229  Identities=28%  Similarity=0.373  Sum_probs=191.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc----------chhhhHHHHHHHHHHhhhcCCCCceEEecc
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS----------QEEKDAQETLEILREAKTSDAKDPMAISAD  106 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  106 (272)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.          ++.+.+.+..+++..    .+.++.++.+|
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D   85 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED----QGRKALTRVLD   85 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT----TTCCEEEEECC
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----cCCeEEEEEcC
Confidence            5679999999999999999999999999999999999842          134455555555543    56788999999


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEec
Q 039897          107 LGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTT  183 (272)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vs  183 (272)
                      ++++++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++   +|+||++|
T Consensus        86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (280)
T 3pgx_A           86 VRDDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVS  164 (280)
T ss_dssp             TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence            99999999999999999999999999999965 468889999999999999999999999999999964   57899999


Q ss_pred             CCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHH-------HHHh--hccCCCCC
Q 039897          184 SVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE-------ESAQ--FGSEVPMK  240 (272)
Q Consensus       184 S~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~-------~~~~--~~~~~~~~  240 (272)
                      |..+..+.+.              +++++.|++++||+||+|+||+|+|++.......+       ....  .....|. 
T Consensus       165 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  243 (280)
T 3pgx_A          165 SSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-  243 (280)
T ss_dssp             CGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-
T ss_pred             chhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-
Confidence            9988877654              68999999999999999999999999864310000       0011  1233444 


Q ss_pred             CCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          241 RAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++.+|+|+|++++||+++. +.++||++|++|
T Consensus       244 r~~~p~dvA~~v~~L~s~~-~~~itG~~i~vd  274 (280)
T 3pgx_A          244 GFMTADEVADVVAWLAGDG-SGTLTGTQIPVD  274 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGG-GTTCSSCEEEES
T ss_pred             CCCCHHHHHHHHHHHhCcc-ccCCCCCEEEEC
Confidence            6889999999999999998 899999999987

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-41  Score=288.90  Aligned_cols=229  Identities=27%  Similarity=0.323  Sum_probs=192.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch---------hhhHHHHHHHHHHhhhcCCCCceEEeccC
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE---------EKDAQETLEILREAKTSDAKDPMAISADL  107 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (272)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+...         .+.+.+..+++..    .+.++.++.+|+
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv   80 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK----TGRRCISAKVDV   80 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH----TTCCEEEEECCT
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHh----cCCeEEEEeCCC
Confidence            457999999999999999999999999999999999997432         3444554444444    567889999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCC
Q 039897          108 GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSV  185 (272)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~  185 (272)
                      +++++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||.
T Consensus        81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~  159 (281)
T 3s55_A           81 KDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSM  159 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            9999999999999999999999999999854 478889999999999999999999999999999855  5899999999


Q ss_pred             CCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-----C-------CHHH-HH--hhccC
Q 039897          186 EPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-----F-------SEEE-SA--QFGSE  236 (272)
Q Consensus       186 ~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-----~-------~~~~-~~--~~~~~  236 (272)
                      .+..+.+.              +++++.|++++||+||+|+||+|+|++....     .       .... ..  .....
T Consensus       160 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (281)
T 3s55_A          160 LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHL  239 (281)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCS
T ss_pred             hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhc
Confidence            88776554              7899999999999999999999999987431     0       0111 11  11223


Q ss_pred             CCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       237 ~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .+ +++.+|+|+|++++||+++. +.++||++|++|
T Consensus       240 ~~-~~~~~p~dvA~~v~~L~s~~-~~~itG~~i~vd  273 (281)
T 3s55_A          240 QY-APFLKPEEVTRAVLFLVDEA-SSHITGTVLPID  273 (281)
T ss_dssp             SS-CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             cC-cCCCCHHHHHHHHHHHcCCc-ccCCCCCEEEEC
Confidence            33 78899999999999999988 889999999987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=7.6e-42  Score=292.36  Aligned_cols=225  Identities=30%  Similarity=0.391  Sum_probs=192.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.   +.+.+..+++..    .+.++.++.+|++++++++++++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~   93 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDA---KNVSAAVDGLRA----AGHDVDGSSCDVTSTDEVHAAVA   93 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHH
Confidence            36799999999999999999999999999999999984   344444555543    46778999999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHh--cccc--CCeEEEecCCCCccCChh-
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLR--HMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~--~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|  .|++  .|+||++||..+..+.+. 
T Consensus        94 ~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~  172 (279)
T 3sju_A           94 AAVERFGPIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA  172 (279)
T ss_dssp             HHHHHHCSCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCC
Confidence            99999999999999999854 47888999999999999999999999999999  5644  489999999988776654 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----------CCHHHHHhhccCCCCCCCCCccchhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----------FSEEESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                                   +++++.|++++||+||+|+||+|+|++....          ..++..+.+....|.+++.+|+|+|+
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  252 (279)
T 3sju_A          173 APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAG  252 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                         6899999999999999999999999875321          12344566777899999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+++. +.++||++|++|
T Consensus       253 ~v~~L~s~~-a~~itG~~i~vd  273 (279)
T 3sju_A          253 LVGYLVTDA-AASITAQALNVC  273 (279)
T ss_dssp             HHHHHTSSG-GGGCCSCEEEES
T ss_pred             HHHHHhCcc-ccCcCCcEEEEC
Confidence            999999988 899999999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-41  Score=288.77  Aligned_cols=229  Identities=30%  Similarity=0.411  Sum_probs=192.6

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH
Q 039897           33 DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        33 ~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      ++...++|+||++|||||++|||+++|++|+++|++|++++|+.    .+.+..+++.+    .+.++.++.+|+++.++
T Consensus        22 ~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~   93 (273)
T 3uf0_A           22 SMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD----GVKEVADEIAD----GGGSAEAVVADLADLEG   93 (273)
T ss_dssp             ---CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST----HHHHHHHHHHT----TTCEEEEEECCTTCHHH
T ss_pred             hcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH----HHHHHHHHHHh----cCCcEEEEEecCCCHHH
Confidence            34445789999999999999999999999999999999999642    23333444433    46678899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccC
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWH  190 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~  190 (272)
                      ++++.+. .++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+..+
T Consensus        94 v~~~~~~-~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~  171 (273)
T 3uf0_A           94 AANVAEE-LAATRRVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG  171 (273)
T ss_dssp             HHHHHHH-HHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHH-HHhcCCCcEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC
Confidence            9999554 456799999999999964 478899999999999999999999999999999965  589999999988776


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .+.              +++++.|++++||+||+|+||+|.|++..... .++....+....|.+++.+|+|+|++++||
T Consensus       172 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L  251 (273)
T 3uf0_A          172 GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFL  251 (273)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            654              78999999999999999999999999864321 234455566778999999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|++|
T Consensus       252 ~s~~-a~~itG~~i~vd  267 (273)
T 3uf0_A          252 ASDA-ASYVHGQVLAVD  267 (273)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             hCch-hcCCcCCEEEEC
Confidence            9988 889999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3e-41  Score=286.11  Aligned_cols=227  Identities=31%  Similarity=0.420  Sum_probs=192.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|+++++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   75 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREA---LEKAEASVRE----KGVEARSYVCDVTSEEAVIGTV   75 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHT----TTSCEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998433   3333444432    3567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  155 (262)
T 1zem_A           76 DSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMA  155 (262)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBH
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCc
Confidence            9999999999999999998534567889999999999999999999999999999965  489999999876655443  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC------------CC--HH-HHHhhccCCCCCCCCCcc
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS------------FS--EE-ESAQFGSEVPMKRAGQPI  246 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~------------~~--~~-~~~~~~~~~~~~~~~~~~  246 (272)
                                  +++++.|++++||+||+|+||+++|++....            ..  ++ ..+.+....|++++.+|+
T Consensus       156 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  235 (262)
T 1zem_A          156 AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN  235 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHH
Confidence                        6889999999999999999999999985321            11  22 334445567899999999


Q ss_pred             chhhhhhhhhccCCCCcccceeeccC
Q 039897          247 EVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       247 dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+.++||+++. +.++||++|.+|
T Consensus       236 dvA~~v~~l~s~~-~~~itG~~i~vd  260 (262)
T 1zem_A          236 EIPGVVAFLLGDD-SSFMTGVNLPIA  260 (262)
T ss_dssp             GSHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHHHHcCch-hcCcCCcEEecC
Confidence            9999999999987 889999999987

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.5e-41  Score=292.03  Aligned_cols=230  Identities=28%  Similarity=0.424  Sum_probs=191.8

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc---------hhhhHHHHHHHHHHhhhcCCCCceEEecc
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ---------EEKDAQETLEILREAKTSDAKDPMAISAD  106 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  106 (272)
                      .+.+|+||++|||||++|||+++|+.|+++|++|++++++..         +.+.+.+..+++..    .+.++.++.+|
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D  115 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE----QGRRIIARQAD  115 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEECC
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHh----cCCeEEEEECC
Confidence            356799999999999999999999999999999999988632         24445555555544    56788999999


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEec
Q 039897          107 LGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTT  183 (272)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vs  183 (272)
                      ++++++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   +|+||++|
T Consensus       116 v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~is  194 (317)
T 3oec_A          116 VRDLASLQAVVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVS  194 (317)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence            99999999999999999999999999999864 467889999999999999999999999999999954   47899999


Q ss_pred             CCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCC------------CCCHHH-HHh--hc
Q 039897          184 SVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS------------SFSEEE-SAQ--FG  234 (272)
Q Consensus       184 S~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~------------~~~~~~-~~~--~~  234 (272)
                      |..+..+.+.              +++++.|++++||+||+|+||+|+|++...            ....+. .+.  ..
T Consensus       195 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (317)
T 3oec_A          195 STVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQL  274 (317)
T ss_dssp             CGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTT
T ss_pred             cHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhh
Confidence            9988877654              789999999999999999999999987421            011111 111  22


Q ss_pred             cCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       235 ~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ...| .++.+|+|||++++||+++. +.++||++|++|
T Consensus       275 ~~~p-~~~~~pedvA~av~fL~s~~-a~~itG~~i~vd  310 (317)
T 3oec_A          275 TLLP-IPWVEPEDVSNAVAWLASDE-ARYIHGAAIPVD  310 (317)
T ss_dssp             CSSS-SSSBCHHHHHHHHHHHTSGG-GTTCCSCEEEES
T ss_pred             ccCC-CCCCCHHHHHHHHHHHcCCc-ccCCCCCEEEEC
Confidence            3344 67889999999999999998 899999999997

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=279.72  Aligned_cols=224  Identities=33%  Similarity=0.439  Sum_probs=197.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+....+   +..+++.+    .+.++.++.+|++++++++++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   74 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE---KFENSMKE----KGFKARGLVLNISDIESIQNFFA   74 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---HHHHHHHH----TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHHHh----cCCceEEEEecCCCHHHHHHHHH
Confidence            578999999999999999999999999999999999854443   33444443    46788999999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..+.+.   
T Consensus        75 ~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  153 (247)
T 3lyl_A           75 EIKAENLAIDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTN  153 (247)
T ss_dssp             HHHHTTCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHH
Confidence            99999999999999999864 467889999999999999999999999999999855  579999999877666544   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 +++++.|++++||+||+|+||++.|++... ..++....+....|.+++.+|+|+|++++||+++. +.
T Consensus       154 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~-~~  231 (247)
T 3lyl_A          154 YCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK-LTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE-AK  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-SCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGG-GT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh-ccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCC-cC
Confidence                       688999999999999999999999999754 35556666777889999999999999999999988 88


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      ++||++|++|
T Consensus       232 ~~tG~~i~vd  241 (247)
T 3lyl_A          232 YITGQTLHVN  241 (247)
T ss_dssp             TCCSCEEEES
T ss_pred             CccCCEEEEC
Confidence            9999999987

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=8.2e-41  Score=283.00  Aligned_cols=224  Identities=30%  Similarity=0.467  Sum_probs=181.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++++|++|||||++|||++++++|+++|++|++++|+....+   +..++       .+.++.++.+|+++.+++++++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~-------~~~~~~~~~~D~~~~~~~~~~~   74 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAE---RVAGE-------IGDAALAVAADISKEADVDAAV   74 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHH-------HCTTEEEEECCTTSHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH---HHHHH-------hCCceEEEEecCCCHHHHHHHH
Confidence            5689999999999999999999999999999999999854433   33322       2457889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc------CCeEEEecCCCCccCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE------GSAIINTTSVEPLWHS  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~------~g~iv~vsS~~~~~~~  191 (272)
                      +++.+.++++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|++      .++||++||..+..+.
T Consensus        75 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  154 (261)
T 3n74_A           75 EAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR  154 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC
Confidence            9999999999999999998665577888999999999999999999999999999965      3579999999887776


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---CHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      +.              +++++.|++++||+||+|+||+++|++.....   .++....+....|.+++.+|+|+|++++|
T Consensus       155 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (261)
T 3n74_A          155 PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAF  234 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHH
Confidence            54              78999999999999999999999999876543   23334556778899999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|++|
T Consensus       235 l~s~~-~~~itG~~i~vd  251 (261)
T 3n74_A          235 LCSPQ-ASMITGVALDVD  251 (261)
T ss_dssp             HTSGG-GTTCCSCEEEES
T ss_pred             HcCCc-ccCcCCcEEEec
Confidence            99988 889999999987

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=9.4e-41  Score=283.48  Aligned_cols=229  Identities=24%  Similarity=0.309  Sum_probs=197.4

Q ss_pred             CCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .++++||++|||||+  +|||+++|++|+++|++|++++|+.+..+.+.+..++.      ...++.++.+|++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~v~   75 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL------DRNDSIILPCDVTNDAEIE   75 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS------SSCCCEEEECCCSSSHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc------CCCCceEEeCCCCCHHHHH
Confidence            457899999999999  66999999999999999999999854443333322211      2337899999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS  191 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~  191 (272)
                      ++++++.+.++++|+||||||+...   ..++.+.+.++|+..+++|+.++++++++++|.|+++|+||++||.++..+.
T Consensus        76 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  155 (266)
T 3oig_A           76 TCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM  155 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC
T ss_pred             HHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC
Confidence            9999999999999999999998642   3678889999999999999999999999999999988999999999888776


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      +.              +++++.|++++||+||+|+||+|+|++....... +....+....|.+++.+|+|+|++++||+
T Consensus       156 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~  235 (266)
T 3oig_A          156 PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLF  235 (266)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            54              6899999999999999999999999987654432 44456667788999999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|++|
T Consensus       236 s~~-~~~~tG~~i~vd  250 (266)
T 3oig_A          236 SDM-SRGITGENLHVD  250 (266)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             CCc-hhcCcCCEEEEC
Confidence            987 889999999987

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=9.9e-42  Score=291.04  Aligned_cols=226  Identities=25%  Similarity=0.307  Sum_probs=192.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+....+.+.+   ++..    .+.++.++.+|+++.++++++
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~---~~~~----~~~~~~~~~~Dv~~~~~~~~~  100 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQ---RIIA----SGGTAQELAGDLSEAGAGTDL  100 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHH---HHHH----TTCCEEEEECCTTSTTHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---HHHh----cCCeEEEEEecCCCHHHHHHH
Confidence            467999999999999999999999999999999999998665544433   3333    567889999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++.+.+. +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||..+..+.+. 
T Consensus       101 ~~~~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~  178 (275)
T 4imr_A          101 IERAEAI-APVDILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVV  178 (275)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHHHh-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCc
Confidence            9999887 99999999999854 468889999999999999999999999999999955  589999999887765433 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--CHHHHHhhccCC-CCCCCCCccchhhhhhhhhc
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--SEEESAQFGSEV-PMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~dva~~~~~L~s  257 (272)
                                   +++++.|++++||+||+|+||+|+|++.....  .++....+.... |++++.+|+|+|++++||++
T Consensus       179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  258 (275)
T 4imr_A          179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLAS  258 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcC
Confidence                         68999999999999999999999999753211  122233333334 88999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|++|
T Consensus       259 ~~-a~~itG~~i~vd  272 (275)
T 4imr_A          259 EA-CSFMTGETIFLT  272 (275)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             cc-cCCCCCCEEEeC
Confidence            98 899999999987

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.7e-41  Score=283.52  Aligned_cols=222  Identities=24%  Similarity=0.314  Sum_probs=176.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      |++++++|++|||||++|||++++++|+++|++|++++|+....+...+   +       .+.++.++.+|+++++++++
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~-------~~~~~~~~~~Dv~~~~~v~~   70 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA---E-------LGAAVRFRNADVTNEADATA   70 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------CEEEECCTTCHHHHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---H-------hCCceEEEEccCCCHHHHHH
Confidence            3467899999999999999999999999999999999998655433322   2       24568899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCc----ccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeEEEec
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSV----EEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAIINTT  183 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~iv~vs  183 (272)
                      +++++.+.+|++|+||||||+... .++    .+.+.++|++.+++|+.+++++++++.|.|++        .|+||++|
T Consensus        71 ~~~~~~~~~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~is  149 (257)
T 3tpc_A           71 ALAFAKQEFGHVHGLVNCAGTAPG-EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTA  149 (257)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC-CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEEC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC-CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEe
Confidence            999999999999999999998643 232    36789999999999999999999999999965        47899999


Q ss_pred             CCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC-CCCCCccch
Q 039897          184 SVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV  248 (272)
Q Consensus       184 S~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv  248 (272)
                      |..+..+.+.              +++++.|++++||+||+|+||+|+|++.... .++..+.+....|. +++.+|+|+
T Consensus       150 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~~r~~~~~dv  228 (257)
T 3tpc_A          150 SIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM-PQDVQDALAASVPFPPRLGRAEEY  228 (257)
T ss_dssp             CTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCSSSSCSCBCHHHH
T ss_pred             chhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC-CHHHHHHHHhcCCCCCCCCCHHHH
Confidence            9987766544              6889999999999999999999999997543 33444556667788 899999999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |++++||+++   .++||++|++|
T Consensus       229 a~~v~~l~s~---~~itG~~i~vd  249 (257)
T 3tpc_A          229 AALVKHICEN---TMLNGEVIRLD  249 (257)
T ss_dssp             HHHHHHHHHC---TTCCSCEEEES
T ss_pred             HHHHHHHccc---CCcCCcEEEEC
Confidence            9999999985   59999999987

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.3e-41  Score=281.71  Aligned_cols=228  Identities=30%  Similarity=0.467  Sum_probs=166.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.   +.+..+++.+    .+.++.++.+|++|+++++++
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~   76 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEA---AEAVAKQIVA----DGGTAISVAVDVSDPESAKAM   76 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCEEEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            356899999999999999999999999999999999998444   4444444443    466788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccC--CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQY--KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~  192 (272)
                      ++++.+.++++|+||||||+..  ...++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..++.+..
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  156 (253)
T 3qiv_A           77 ADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN  156 (253)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCCc
Confidence            9999999999999999999842  2356778899999999999999999999999999965  58999999988764332


Q ss_pred             h-----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          193 E-----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       193 ~-----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                      .           +++++.|++++||+||+|+||+++|++......++..+.+....|.+++.+|+|+|++++||+++. .
T Consensus       157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~  235 (253)
T 3qiv_A          157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDE-A  235 (253)
T ss_dssp             ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHHHHHHSGG-G
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcc-c
Confidence            2           788999999999999999999999998765555555566677788999999999999999999987 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||++|++|
T Consensus       236 ~~~tG~~~~vd  246 (253)
T 3qiv_A          236 SWITGQIFNVD  246 (253)
T ss_dssp             TTCCSCEEEC-
T ss_pred             cCCCCCEEEEC
Confidence            89999999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.2e-40  Score=284.59  Aligned_cols=225  Identities=26%  Similarity=0.378  Sum_probs=187.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc---------hhhhHHHHHHHHHHhhhcCCCCceEEeccC
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ---------EEKDAQETLEILREAKTSDAKDPMAISADL  107 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (272)
                      ..+|+||++|||||++|||++++++|+++|++|++++|+..         ..+.+.+..+++..    .+.++.++.+|+
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~   83 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED----IGSRIVARQADV   83 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH----HTCCEEEEECCT
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh----cCCeEEEEeCCC
Confidence            45799999999999999999999999999999999998732         23444444444443    456889999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecC
Q 039897          108 GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTS  184 (272)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS  184 (272)
                      +++++++++++++.+.+|++|+||||||+... .    .+.++|++++++|+.++++++++++|+|++   +|+||++||
T Consensus        84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  158 (278)
T 3sx2_A           84 RDRESLSAALQAGLDELGRLDIVVANAGIAPM-S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS  158 (278)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence            99999999999999999999999999998542 2    158999999999999999999999999965   579999999


Q ss_pred             CCCccCC----hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHH----------HhhccC
Q 039897          185 VEPLWHS----PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES----------AQFGSE  236 (272)
Q Consensus       185 ~~~~~~~----~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~----------~~~~~~  236 (272)
                      .++..+.    +.              +++++.|++++||+||+|+||+|+|++.......+..          ..+...
T Consensus       159 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (278)
T 3sx2_A          159 SAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA  238 (278)
T ss_dssp             GGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCS
T ss_pred             HHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhh
Confidence            9887765    33              6899999999999999999999999997542211111          123344


Q ss_pred             CCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       237 ~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .| +++.+|+|+|++++||+++. +.++||++|++|
T Consensus       239 ~p-~~~~~p~dvA~~v~~l~s~~-~~~itG~~i~vd  272 (278)
T 3sx2_A          239 MP-VEVLAPEDVANAVAWLVSDQ-ARYITGVTLPVD  272 (278)
T ss_dssp             SS-CSSBCHHHHHHHHHHHTSGG-GTTCCSCEEEES
T ss_pred             cC-cCcCCHHHHHHHHHHHhCcc-cccccCCEEeEC
Confidence            56 78889999999999999988 899999999987

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-40  Score=281.97  Aligned_cols=226  Identities=32%  Similarity=0.484  Sum_probs=188.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+..   .+.+..+++..    .+.++.++.+|+++++++++++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   89 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEK---ELDECLEIWRE----KGLNVEGSVCDLLSRTERDKLM   89 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHH
Confidence            4689999999999999999999999999999999999843   34444444443    3567889999999999999999


Q ss_pred             HHHHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||.++..+.+. 
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  168 (273)
T 1ae1_A           90 QTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV  168 (273)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHcCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCc
Confidence            9999999 89999999999854 467888999999999999999999999999999965  589999999988766544 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-----HHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                   +++++.|++++||+||+|+||+++|++......     .+..+.+....|.+++.+|+|+|++++||
T Consensus       169 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  248 (273)
T 1ae1_A          169 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFL  248 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence                         688999999999999999999999998654322     23333445567889999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|++|
T Consensus       249 ~s~~-~~~~tG~~i~vd  264 (273)
T 1ae1_A          249 CFPA-ASYITGQIIWAD  264 (273)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             hCcc-ccCcCCCEEEEC
Confidence            9987 889999999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-40  Score=280.89  Aligned_cols=228  Identities=31%  Similarity=0.497  Sum_probs=190.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.+.   .+.++.++.+|++++++++++
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~   89 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEE---ASEAAQKLTEK---YGVETMAFRCDVSNYEEVKKL   89 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHH
Confidence            466899999999999999999999999999999999998443   33333333111   245788899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCC-CccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVE-PLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~-~~~~~~~  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||.. +..+.+.
T Consensus        90 ~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  168 (267)
T 1vl8_A           90 LEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN  168 (267)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC
Confidence            9999999999999999999854 467889999999999999999999999999999965  47999999987 6554332


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|++++||+||+|+||+++|++..... .++....+....|.+++.+|+|+|+.++||+++
T Consensus       169 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~  248 (267)
T 1vl8_A          169 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASE  248 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCc
Confidence                          68899999999999999999999999864321 123333444567888999999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.++||++|.+|
T Consensus       249 ~-~~~itG~~i~vd  261 (267)
T 1vl8_A          249 E-AKYVTGQIIFVD  261 (267)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             c-ccCCcCCeEEEC
Confidence            7 889999999987

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.2e-41  Score=289.10  Aligned_cols=223  Identities=30%  Similarity=0.370  Sum_probs=186.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+...   +.+..+++       +.++.++.+|++|++++++++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~   94 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDA---ADAAATKI-------GCGAAACRVDVSDEQQIIAMV   94 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHH-------CSSCEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHc-------CCcceEEEecCCCHHHHHHHH
Confidence            56999999999999999999999999999999999998433   33333322       557889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+..+.+.  
T Consensus        95 ~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~  173 (277)
T 3gvc_A           95 DACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTG  173 (277)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCch
Confidence            999999999999999999964 467889999999999999999999999999999954  589999999988877654  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---CHHHHHhhcc---CCCCCCCCCccchhhhhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGS---EVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~dva~~~~~L  255 (272)
                                  +++++.|++++||+||+|+||+|+|++.....   ..........   ..|.+++.+|+|+|++++||
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L  253 (277)
T 3gvc_A          174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFL  253 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHH
Confidence                        68999999999999999999999998742210   1011111111   34567889999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|++|
T Consensus       254 ~s~~-a~~itG~~i~vd  269 (277)
T 3gvc_A          254 LSDD-ASMITGTTQIAD  269 (277)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             cCCc-cCCccCcEEEEC
Confidence            9998 899999999987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=2.2e-40  Score=278.23  Aligned_cols=224  Identities=34%  Similarity=0.513  Sum_probs=190.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV-KSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +|++|++|||||++|||++++++|+++|++|++++| +.   +.+.+..+++..    .+.++.++.+|+++++++++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   73 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNE---QKANEVVDEIKK----LGSDAIAVRADVANAEDVTNMV   73 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHH
Confidence            368999999999999999999999999999999998 53   334444444443    3567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  152 (246)
T 2uvd_A           74 KQTVDVFGQVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQA  152 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCc
Confidence            999999999999999999854 467888999999999999999999999999999964  489999999877655443  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.|++++||+||+|+||+++|++.... .++....+....|.+++.+|+|+|+.++||+++. +
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~-~  230 (246)
T 2uvd_A          153 NYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL-DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQ-S  230 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC-CTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG-G
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch-h
Confidence                        6888999999999999999999999987543 2333334445678889999999999999999987 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||++|.+|
T Consensus       231 ~~~tG~~~~vd  241 (246)
T 2uvd_A          231 KYITGQTLNVD  241 (246)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCCCCEEEEC
Confidence            89999999987

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=4.2e-40  Score=277.53  Aligned_cols=218  Identities=24%  Similarity=0.363  Sum_probs=185.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccC--CChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADL--GFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~  115 (272)
                      ..|+||++|||||++|||++++++|+++|++|++++|+...   +.+..+++.+.   ...++.++.+|+  ++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~   81 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEK---LRQVASHINEE---TGRQPQWFILDLLTCTSENCQQ   81 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH---HSCCCEEEECCTTTCCHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhh---cCCCceEEEEecccCCHHHHHH
Confidence            45899999999999999999999999999999999998544   44444444332   234788999999  99999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+.+.
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (252)
T 3f1l_A           82 LAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN  161 (252)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC
Confidence            999999999999999999998655578899999999999999999999999999999965  589999999988777654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|+++. |+||+|+||+++|++....         ....+..++.+|+|+|+.++||+++.
T Consensus       162 ~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~---------~~~~~~~~~~~p~dva~~~~~L~s~~  231 (252)
T 3f1l_A          162 WGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASA---------FPTEDPQKLKTPADIMPLYLWLMGDD  231 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHH---------CTTCCGGGSBCTGGGHHHHHHHHSGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhh---------CCccchhccCCHHHHHHHHHHHcCcc
Confidence                          68999999887 9999999999999874221         11222345678999999999999998


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|++|
T Consensus       232 -~~~itG~~i~vd  243 (252)
T 3f1l_A          232 -SRRKTGMTFDAQ  243 (252)
T ss_dssp             -GTTCCSCEEESS
T ss_pred             -ccCCCCCEEEeC
Confidence             899999999997

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=8.8e-41  Score=286.51  Aligned_cols=227  Identities=25%  Similarity=0.350  Sum_probs=187.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch---------hhhHHHHHHHHHHhhhcCCCCceEEeccC
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE---------EKDAQETLEILREAKTSDAKDPMAISADL  107 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (272)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+...         .+.+.+...++..    .+.++.++.+|+
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~   80 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK----TGRKAYTAEVDV   80 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH----TTSCEEEEECCT
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh----cCCceEEEEccC
Confidence            467999999999999999999999999999999999987221         2333333334433    567889999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          108 GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +++++++++++++.+.++++|+||||||+... .  .+.+.++|++.+++|+.++++++++++|+|+++++||++||..+
T Consensus        81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  157 (287)
T 3pxx_A           81 RDRAAVSRELANAVAEFGKLDVVVANAGICPL-G--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG  157 (287)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCcc-c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh
Confidence            99999999999999999999999999998643 2  33788999999999999999999999999988899999999876


Q ss_pred             ccCC-----------hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC------------CH-HH
Q 039897          188 LWHS-----------PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF------------SE-EE  229 (272)
Q Consensus       188 ~~~~-----------~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~------------~~-~~  229 (272)
                      ..+.           +.              +++++.|++++||+||+|+||+|+|++.....            .. +.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            6443           22              68999999999999999999999999874310            00 00


Q ss_pred             HH--hhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          230 SA--QFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       230 ~~--~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ..  ......| +++.+|+|+|++++||+++. +.++||++|++|
T Consensus       238 ~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~-a~~itG~~i~vd  280 (287)
T 3pxx_A          238 LLAFPAMQAMP-TPYVEASDISNAVCFLASDE-SRYVTGLQFKVD  280 (287)
T ss_dssp             HHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HhhhhhhcccC-CCCCCHHHHHhhHheecchh-hcCCCCceEeEC
Confidence            11  1334455 78899999999999999998 899999999987

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.5e-40  Score=282.90  Aligned_cols=227  Identities=29%  Similarity=0.426  Sum_probs=190.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+.+|++|||||++|||++++++|+++|++|++++++..  +.+.+...++..    .+.++.++.+|+++.+++++++
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~   94 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN--DHVSTWLMHERD----AGRDFKAYAVDVADFESCERCA   94 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCH--HHHHHHHHHHHT----TTCCCEEEECCTTCHHHHHHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCch--HHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHH
Confidence            3478999999999999999999999999999999985432  333333333332    5678999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|++  .++||++||..+..+.+.  
T Consensus        95 ~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  173 (269)
T 3gk3_A           95 EKVLADFGKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQA  173 (269)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBH
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcc
Confidence            999999999999999999864 467888999999999999999999999999999854  589999999877665543  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.|++++||+||+|+||+|+|++............+....|.+++.+|+|+|++++||+++. +
T Consensus       174 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~-~  252 (269)
T 3gk3_A          174 NYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDD-A  252 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTT-C
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCC-c
Confidence                        688999999999999999999999999865433333335667789999999999999999999988 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||++|++|
T Consensus       253 ~~itG~~i~vd  263 (269)
T 3gk3_A          253 GFVTGADLAIN  263 (269)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCeeCcEEEEC
Confidence            99999999987

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=3.3e-40  Score=283.87  Aligned_cols=225  Identities=27%  Similarity=0.382  Sum_probs=189.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH----
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTY-VKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE----  111 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----  111 (272)
                      +.+|++|++|||||++|||++++++|+++|++|++++ |+..   .+.+..+++..   ..+.++.++.+|+++++    
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~---~~~~~~~~l~~---~~~~~~~~~~~Dl~~~~~~~~   77 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA---EANALSATLNA---RRPNSAITVQADLSNVATAPV   77 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHH---HSTTCEEEEECCCSSSCBCCC
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHH---HHHHHHHHHhh---hcCCeeEEEEeecCCcccccc
Confidence            4568999999999999999999999999999999999 8743   34444444431   14567889999999999    


Q ss_pred             -------------HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCC--------------HHHHHHHHHhhhHHHHH
Q 039897          112 -------------NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID--------------EERLERVFRTNIFSHFF  164 (272)
Q Consensus       112 -------------~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~  164 (272)
                                   +++++++++.+.+|++|+||||||+.. ..++.+.+              .++|++++++|+.++++
T Consensus        78 ~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  156 (291)
T 1e7w_A           78 SGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF  156 (291)
T ss_dssp             C----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHH
T ss_pred             cccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHH
Confidence                         999999999999999999999999854 36777788              99999999999999999


Q ss_pred             HHHHHHhcccc--------CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCC
Q 039897          165 MTRHSLRHMNE--------GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIP  222 (272)
Q Consensus       165 l~~~~~~~~~~--------~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~  222 (272)
                      ++++++|.|++        .++||++||..+..+.+.              +++++.|++++||+||+|+||+|+|++ .
T Consensus       157 l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~  235 (291)
T 1e7w_A          157 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  235 (291)
T ss_dssp             HHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G
T ss_pred             HHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c
Confidence            99999999964        378999999988776554              789999999999999999999999999 4


Q ss_pred             CCCCHHHHHhhccCCCCC-CCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          223 SSFSEEESAQFGSEVPMK-RAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                        ..++....+....|++ ++.+|+|+|+.++||+++. +.++||++|.+|
T Consensus       236 --~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~-~~~itG~~i~vd  283 (291)
T 1e7w_A          236 --MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK-AKYITGTCVKVD  283 (291)
T ss_dssp             --SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             --CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCc-ccCccCcEEEEC
Confidence              3344444555667888 8999999999999999987 889999999987

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-40  Score=282.35  Aligned_cols=228  Identities=22%  Similarity=0.302  Sum_probs=190.0

Q ss_pred             CCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           36 PSNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      +..++++|++|||||+  +|||++++++|+++|++|++++|+.+..+.+.+..+        ..+++.++.+|+++++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v   79 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAA--------EFGSELVFPCDVADDAQI   79 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH--------HTTCCCEEECCTTCHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHH--------HcCCcEEEECCCCCHHHH
Confidence            4567999999999998  999999999999999999999998544433333222        233588999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCC---CCccc-CCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEE-IDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW  189 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~---~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~  189 (272)
                      +++++++.+.++++|+||||||+....   .++.+ .+.++|++.+++|+.++++++++++|.|+++++||++||.++..
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~  159 (271)
T 3ek2_A           80 DALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER  159 (271)
T ss_dssp             HHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc
Confidence            999999999999999999999986431   44555 89999999999999999999999999999889999999988776


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      +.+.              +++++.|++++||+||+|+||+|+|++...... ++..+.+....|.+++.+|+|+|+.++|
T Consensus       160 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~  239 (271)
T 3ek2_A          160 AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAF  239 (271)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence            6554              689999999999999999999999999755322 2344556677899999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|++|
T Consensus       240 l~s~~-~~~~tG~~i~vd  256 (271)
T 3ek2_A          240 LLSDL-ASGVTAEVMHVD  256 (271)
T ss_dssp             HHSGG-GTTCCSEEEEES
T ss_pred             HcCcc-cCCeeeeEEEEC
Confidence            99987 889999999987

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.9e-40  Score=282.80  Aligned_cols=222  Identities=28%  Similarity=0.400  Sum_probs=184.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+.   +.+...+       .+.++.++.+|++++++++++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~   71 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAER---LRELEVA-------HGGNAVGVVGDVRSLQDQKRAAE   71 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHH-------TBTTEEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHH---HHHHHHH-------cCCcEEEEEcCCCCHHHHHHHHH
Confidence            5889999999999999999999999999999999997433   3222221       35678899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcc----cCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVE----EIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~  193 (272)
                      ++.+.++++|+||||||+.....++.    +.+.++|++++++|+.++++++++++|+|++ +|+||++||..+..+.+.
T Consensus        72 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  151 (281)
T 3zv4_A           72 RCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGG  151 (281)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSS
T ss_pred             HHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCC
Confidence            99999999999999999864333333    4456789999999999999999999999954 689999999988776544


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC---------HHHHHhhccCCCCCCCCCccchhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS---------EEESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                                    +++++.|++++ |+||+|+||+|+|++......         .+..+.+....|++++.+|+|+|+
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  230 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTG  230 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHH
Confidence                          78999999987 999999999999998643211         112345567789999999999999


Q ss_pred             hhhhhhc-cCCCCcccceeeccC
Q 039897          251 CYVFLAC-NHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s-~~~~~~~tG~~i~id  272 (272)
                      +++||++ +. +.++||++|++|
T Consensus       231 ~v~fL~s~~~-~~~itG~~i~vd  252 (281)
T 3zv4_A          231 AYVFFATRGD-SLPATGALLNYD  252 (281)
T ss_dssp             HHHHHHSTTT-STTCSSCEEEES
T ss_pred             HHHHhhcccc-cccccCcEEEEC
Confidence            9999999 55 889999999987

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.6e-40  Score=283.37  Aligned_cols=228  Identities=34%  Similarity=0.584  Sum_probs=191.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++|++|||||++|||++++++|+++|++|++++|+...  ......+++.+    .+.++.++.+|+++.++++++
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~   97 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE--SAEEVVAAIKK----NGSDAACVKANVGVVEDIVRM   97 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH--HHHHHHHHHHH----hCCCeEEEEcCCCCHHHHHHH
Confidence            456899999999999999999999999999999999997532  12233333433    456788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh--h-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP--E-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~--~-  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++.++||++||..+..+.+  . 
T Consensus        98 ~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  176 (283)
T 1g0o_A           98 FEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHA  176 (283)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCH
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCc
Confidence            9999999999999999999854 46788899999999999999999999999999997779999999987765432  1 


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----------CCHHHHHhhcc--CCCCCCCCCccchh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----------FSEEESAQFGS--EVPMKRAGQPIEVA  249 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~dva  249 (272)
                                  +++++.|++++||+||+|+||+++|++....          ...+....+..  ..|.+++.+|+|+|
T Consensus       177 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  256 (283)
T 1g0o_A          177 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHH
Confidence                        6889999999999999999999999874221          02333344444  67889999999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++||+++. +.++||++|.+|
T Consensus       257 ~~v~~l~s~~-~~~itG~~i~vd  278 (283)
T 1g0o_A          257 RVVCFLASND-GGWVTGKVIGID  278 (283)
T ss_dssp             HHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHhCcc-ccCcCCCEEEeC
Confidence            9999999987 889999999987

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.3e-40  Score=282.03  Aligned_cols=233  Identities=33%  Similarity=0.506  Sum_probs=181.5

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH
Q 039897           33 DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        33 ~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      ++.+....++|++|||||++|||+++|++|+++|++|++++.+.  .+.+.+..+++.+    .+.++.++.+|++++++
T Consensus        17 n~~~~~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~   90 (272)
T 4e3z_A           17 NLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN--REAADAVVAAITE----SGGEAVAIPGDVGNAAD   90 (272)
T ss_dssp             -------CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCEEEEEECCTTCHHH
T ss_pred             hhhhhhccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC--hhHHHHHHHHHHh----cCCcEEEEEcCCCCHHH
Confidence            33333345689999999999999999999999999998874432  2333344444443    46678999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCC
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEP  187 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~  187 (272)
                      ++++++++.+.++++|+||||||+.....++.+.+.++|++++++|+.+++++++.++|.|++     .++||++||.++
T Consensus        91 v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  170 (272)
T 4e3z_A           91 IAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAA  170 (272)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHH
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHh
Confidence            999999999999999999999998665578889999999999999999999999999999865     578999999877


Q ss_pred             ccCCh-h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhh
Q 039897          188 LWHSP-E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       188 ~~~~~-~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                      ..+.+ .              +++++.|++++||+||+|+||+|+|++.......+....+....|.+++.+|+|+|+++
T Consensus       171 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i  250 (272)
T 4e3z_A          171 ILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAI  250 (272)
T ss_dssp             HHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHH
T ss_pred             ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHH
Confidence            65443 1              67899999999999999999999999875543444455566778889999999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+++. ..++||++|++|
T Consensus       251 ~~l~s~~-~~~~tG~~i~vd  269 (272)
T 4e3z_A          251 LYLLSPS-ASYVTGSILNVS  269 (272)
T ss_dssp             HHHHSGG-GTTCCSCEEEES
T ss_pred             HHHhCCc-cccccCCEEeec
Confidence            9999988 889999999987

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=4e-40  Score=277.14  Aligned_cols=223  Identities=30%  Similarity=0.465  Sum_probs=180.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+..  +.+.+   ++.+    .+.++.++.+|++++++++++
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~---~~~~----~~~~~~~~~~Dv~~~~~v~~~   72 (249)
T 2ew8_A            2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEA---AIRN----LGRRVLTVKCDVSQPGDVEAF   72 (249)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHH---HHHH----TTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch--hHHHH---HHHh----cCCcEEEEEeecCCHHHHHHH
Confidence            34688999999999999999999999999999999999851  22222   2222    356788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  151 (249)
T 2ew8_A           73 GKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY  151 (249)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc
Confidence            9999999999999999999854 467889999999999999999999999999999965  489999999987766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCC-CCCCH--HHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIP-SSFSE--EESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                   +++++.|++++||+||+|+||+++|++.. .....  +....+.  .|.+++.+|+|+|++++||++
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s  229 (249)
T 2ew8_A          152 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLAS  229 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcC
Confidence                         68899999999999999999999999865 22111  1112221  678889999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|.+|
T Consensus       230 ~~-~~~~tG~~~~vd  243 (249)
T 2ew8_A          230 DD-ASFITGQTLAVD  243 (249)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             cc-cCCCCCcEEEEC
Confidence            87 889999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1e-40  Score=283.53  Aligned_cols=230  Identities=29%  Similarity=0.471  Sum_probs=190.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++.+..  .+.++.++.+|++++++++++
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~   82 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEG---LEASKAAVLETA--PDAEVLTTVADVSDEAQVEAY   82 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHHC--TTCCEEEEECCTTSHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhhc--CCceEEEEEccCCCHHHHHHH
Confidence            356899999999999999999999999999999999998543   333334443210  256788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (267)
T 1iy8_A           83 VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ  162 (267)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCC
Confidence            99999999999999999998543267888999999999999999999999999999965  489999999887765443 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC--C-CHHHHH----hhccCCCCCCCCCccchhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS--F-SEEESA----QFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~--~-~~~~~~----~~~~~~~~~~~~~~~dva~~~~  253 (272)
                                   +++++.|++++||+||+|+||+++|++....  . .++...    .+....|.+++.+|+|+|++++
T Consensus       163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~  242 (267)
T 1iy8_A          163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVA  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHH
Confidence                         6889999999999999999999999975321  0 111111    4445678899999999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      ||+++. +.++||++|.+|
T Consensus       243 ~l~s~~-~~~~tG~~i~vd  260 (267)
T 1iy8_A          243 FLLSDD-ASYVNATVVPID  260 (267)
T ss_dssp             HHTSGG-GTTCCSCEEEES
T ss_pred             HHcCcc-ccCCCCCEEEEC
Confidence            999987 889999999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=4.9e-40  Score=278.24  Aligned_cols=228  Identities=30%  Similarity=0.451  Sum_probs=191.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ...|++|++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++..    .+.++.++.+|+++.++++++
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~   81 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQEN---VDRTVATLQG----EGLSVTGTVCHVGKAEDRERL   81 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCceEEEEccCCCHHHHHHH
Confidence            345889999999999999999999999999999999998443   3334444433    456788899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        82 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  161 (260)
T 2zat_A           82 VAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNL  161 (260)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCc
Confidence            99999999999999999998543467888999999999999999999999999999965  479999999988766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-CCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   +++++.|++++||+||+|+||++.|++.... ...+....+....|.+++.+|+|+|++++||+++.
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~  241 (260)
T 2zat_A          162 GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence                         6889999999999999999999999985321 12222233445567888999999999999999987


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.+++|++|++|
T Consensus       242 -~~~~tG~~~~vd  253 (260)
T 2zat_A          242 -ASYITGETVVVG  253 (260)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -cCCccCCEEEEC
Confidence             889999999987

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=7e-41  Score=284.92  Aligned_cols=216  Identities=32%  Similarity=0.508  Sum_probs=187.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+++||+||||||++|||+++|++|+++|++|++++|+....                 ...+..+.+|++++++++++
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~~~Dv~~~~~v~~~   71 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------------VNVSDHFKIDVTNEEEVKEA   71 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------------TTSSEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------------cCceeEEEecCCCHHHHHHH
Confidence            4569999999999999999999999999999999999975432                 23567899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+..+.+. 
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  150 (269)
T 3vtz_A           72 VEKTTKKYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA  150 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC
Confidence            9999999999999999999854 478889999999999999999999999999999965  589999999988877654 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-------C---HHHHHhhccCCCCCCCCCccchhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-------S---EEESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                                   +++++.|+++ +|+||+|+||+|+|++.....       .   .+..+.+....|.+++.+|+|+|+
T Consensus       151 ~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  229 (269)
T 3vtz_A          151 AAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAE  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                         6899999988 899999999999998752210       1   233455666789999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+++. +.++||++|++|
T Consensus       230 ~v~~L~s~~-~~~itG~~i~vd  250 (269)
T 3vtz_A          230 VVAFLASDR-SSFITGACLTVD  250 (269)
T ss_dssp             HHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHhCCc-cCCCcCcEEEEC
Confidence            999999988 899999999987

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-40  Score=278.70  Aligned_cols=228  Identities=27%  Similarity=0.347  Sum_probs=192.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +...+++|++|||||++|||+++|++|+++|++|++++++..  +...+..+++.+    .+.++.++.+|+++.+++++
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~   80 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS--PRRVKWLEDQKA----LGFDFYASEGNVGDWDSTKQ   80 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTC--SSHHHHHHHHHH----TTCCCEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHHHh----cCCeeEEEecCCCCHHHHHH
Confidence            345689999999999999999999999999999999884322  223333344433    46788999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+.
T Consensus        81 ~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  159 (256)
T 3ezl_A           81 AFDKVKAEVGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG  159 (256)
T ss_dssp             HHHHHHHHTCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCC
Confidence            99999999999999999999864 467889999999999999999999999999999965  489999999988777654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|++++||+||+|+||+++|++... ..++....+....|.+++.+|+|+|++++||+++.
T Consensus       160 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  238 (256)
T 3ezl_A          160 QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEE  238 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence                          688999999999999999999999998744 34555666677789999999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|++|
T Consensus       239 -~~~~tG~~i~vd  250 (256)
T 3ezl_A          239 -SGFSTGADFSLN  250 (256)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -ccCCcCcEEEEC
Confidence             889999999987

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-39  Score=276.34  Aligned_cols=221  Identities=33%  Similarity=0.453  Sum_probs=186.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..++       ...++.++.+|+++++++++++
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~   71 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERL---LAEAVAA-------LEAEAIAVVADVSDPKAVEAVF   71 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHT-------CCSSEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------hcCceEEEEcCCCCHHHHHHHH
Confidence            35889999999999999999999999999999999998433   3222221       2356788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++++.|.|++.++||++||..+. +.+.    
T Consensus        72 ~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y  149 (263)
T 2a4k_A           72 AEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHY  149 (263)
T ss_dssp             HHHHHHHSCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHH
T ss_pred             HHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHH
Confidence            999999999999999999854 4678889999999999999999999999999999446899999999887 5433    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.|++++||+||+|+||+++|++.... .++....+....|.+++.+|+|+|+.++||+++. +.+
T Consensus       150 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~-~~~  227 (263)
T 2a4k_A          150 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE-SAY  227 (263)
T ss_dssp             HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG-GTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-ccC
Confidence                      7899999999999999999999999987543 3444444556678889999999999999999987 889


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      +||++|.+|
T Consensus       228 ~tG~~i~vd  236 (263)
T 2a4k_A          228 ITGQALYVD  236 (263)
T ss_dssp             CCSCEEEES
T ss_pred             CcCCEEEEC
Confidence            999999987

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.9e-40  Score=278.86  Aligned_cols=226  Identities=31%  Similarity=0.440  Sum_probs=183.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|++|||||++|||++++++|+++|++|++++|+...  .+.+..+++...   .+.++.++.+|+++++++++++++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~   76 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA--EIEKVRAGLAAQ---HGVKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH--HHHHHHHHHHHH---HTSCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch--HHHHHHHHHHhc---cCCcEEEEECCCCCHHHHHHHHHH
Confidence            679999999999999999999999999999999998543  033333333321   145688899999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+.    
T Consensus        77 ~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  155 (260)
T 1x1t_A           77 AVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAY  155 (260)
T ss_dssp             HHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchH
Confidence            9999999999999999854 467888999999999999999999999999999965  489999999987766543    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----------HHHHHhh-ccCCCCCCCCCccchhhhh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----------EEESAQF-GSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~dva~~~  252 (272)
                                +++++.|++++||+||+|+||+++|++......          ++....+ ....|.+++.+|+|+|+++
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~  235 (260)
T 1x1t_A          156 VAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHH
Confidence                      688999999999999999999999998654221          1111222 3446888999999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+++. +.++||++|++|
T Consensus       236 ~~l~s~~-~~~~tG~~~~vd  254 (260)
T 1x1t_A          236 VFLASDA-AAQITGTTVSVD  254 (260)
T ss_dssp             HHHHSGG-GTTCCSCEEEES
T ss_pred             HHHhChh-hcCCCCCEEEEC
Confidence            9999987 889999999987

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.1e-40  Score=282.67  Aligned_cols=217  Identities=23%  Similarity=0.301  Sum_probs=182.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhh----HHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD----AQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+....+.    +.+..+++..    .+.++.++.+|+++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v   77 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA----AGGQGLALKCDIREEDQV   77 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHH----HTSEEEEEECCTTCHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHh----cCCeEEEEeCCCCCHHHH
Confidence            46899999999999999999999999999999999998754332    3344444433    466788999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccC-
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWH-  190 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~-  190 (272)
                      +++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+ 
T Consensus        78 ~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  156 (274)
T 3e03_A           78 RAAVAATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA  156 (274)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC
Confidence            9999999999999999999999864 468889999999999999999999999999999965  489999999988766 


Q ss_pred             -Chh--------------HHHHHHHHhhCCeEEEEEecc-cccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          191 -SPE--------------ARGLALQLVERGIRVNGVAPG-PIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       191 -~~~--------------~~~la~e~~~~gi~vn~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                       .+.              +++++.|++++||+||+|+|| +++|++....          ...+..+..+|+|+|++++|
T Consensus       157 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~----------~~~~~~~~~~pedvA~~v~~  226 (274)
T 3e03_A          157 WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML----------PGVDAAACRRPEIMADAAHA  226 (274)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------CCCGGGSBCTHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc----------ccccccccCCHHHHHHHHHH
Confidence             222              789999999999999999999 6899986221          12234456799999999999


Q ss_pred             hhccCCCCcccceeec
Q 039897          255 LACNHCSSYITGQVLH  270 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~  270 (272)
                      |+++. +.++||++|.
T Consensus       227 l~s~~-~~~itG~~i~  241 (274)
T 3e03_A          227 VLTRE-AAGFHGQFLI  241 (274)
T ss_dssp             HHTSC-CTTCCSCEEE
T ss_pred             HhCcc-ccccCCeEEE
Confidence            99998 8999999983

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=4.2e-40  Score=279.56  Aligned_cols=228  Identities=29%  Similarity=0.418  Sum_probs=196.1

Q ss_pred             CCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           36 PSNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      +..+++||++|||||+  +|||++++++|+++|++|++++++....  ..+.++++.+.   .+.++.++.+|+++++++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~--~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v   88 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQG--AEENVKELEKT---YGIKAKAYKCQVDSYESC   88 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSH--HHHHHHHHHHH---HCCCEECCBCCTTCHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchh--HHHHHHHHHHh---cCCceeEEecCCCCHHHH
Confidence            4567999999999999  9999999999999999999999886543  12333333321   366789999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS  191 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~  191 (272)
                      +++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.
T Consensus        89 ~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  167 (267)
T 3gdg_A           89 EKLVKDVVADFGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN  167 (267)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC
Confidence            9999999999999999999999865 467888999999999999999999999999999965  5899999998776543


Q ss_pred             --hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          192 --PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       192 --~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                        +.              +++++.|+++. |+||+|+||+++|++... ..++....+....|.+++.+|+|+|++++||
T Consensus       168 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l  245 (267)
T 3gdg_A          168 FPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDF-VPKETQQLWHSMIPMGRDGLAKELKGAYVYF  245 (267)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGG-SCHHHHHHHHTTSTTSSCEETHHHHHHHHHH
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhh-CCHHHHHHHHhcCCCCCCcCHHHHHhHhhee
Confidence              11              68899999887 999999999999998743 4566667778889999999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|++|
T Consensus       246 ~s~~-~~~itG~~i~vd  261 (267)
T 3gdg_A          246 ASDA-STYTTGADLLID  261 (267)
T ss_dssp             HSTT-CTTCCSCEEEES
T ss_pred             ecCc-cccccCCEEEEC
Confidence            9988 899999999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=5.6e-40  Score=280.91  Aligned_cols=226  Identities=25%  Similarity=0.330  Sum_probs=192.9

Q ss_pred             CCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +.++++|++|||||+  +|||+++|++|+++|++|++++|+.     ..+.++++.+    ...++.++.+|++++++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~   91 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-----FKDRVEKLCA----EFNPAAVLPCDVISDQEIK   91 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-----CHHHHHHHHG----GGCCSEEEECCTTCHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-----HHHHHHHHHH----hcCCceEEEeecCCHHHHH
Confidence            467999999999988  7899999999999999999999985     1222333332    2345889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCC---CCCccc-CCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCcc
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYK---AGSVEE-IDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLW  189 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~  189 (272)
                      ++++++.+.++++|+||||||+...   ..++.+ .+.++|++.+++|+.++++++++++|.|++ .++||++||.++..
T Consensus        92 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~  171 (280)
T 3nrc_A           92 DLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK  171 (280)
T ss_dssp             HHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc
Confidence            9999999999999999999998643   145555 899999999999999999999999999974 68999999998877


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      +.+.              +++++.|++++||+||+|+||+|+|++...... .+..+.+....|.+++.+|+|+|++++|
T Consensus       172 ~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~  251 (280)
T 3nrc_A          172 AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAF  251 (280)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            7654              688999999999999999999999998765443 3445566677889999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|++|
T Consensus       252 l~s~~-~~~~tG~~i~vd  268 (280)
T 3nrc_A          252 LCSDM-ATGITGEVVHVD  268 (280)
T ss_dssp             TTSGG-GTTCCSCEEEES
T ss_pred             HhCcc-cCCcCCcEEEEC
Confidence            99987 889999999987

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=6.5e-40  Score=279.16  Aligned_cols=227  Identities=29%  Similarity=0.402  Sum_probs=189.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++++||++|||||++|||+++|++|+++|++|++++|+...  ......+++.+    .+.++.++.+|++++++++++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAE--VADALKNELEE----KGYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHH--HHHHHHHHHHh----cCCceEEEECCCCCHHHHHHH
Confidence            467999999999999999999999999999999999996432  22333333333    567889999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..+.+. 
T Consensus        98 ~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  176 (271)
T 4iin_A           98 IQTIVQSDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ  176 (271)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCc
Confidence            9999999999999999999965 467888999999999999999999999999999965  489999999877665544 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.|++++||+||+|+||+++|++.... .++....+....|.+++.+|+|+|++++||+++. 
T Consensus       177 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~-  254 (271)
T 4iin_A          177 TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL-KDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDH-  254 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------CGGGCTTCSCBCHHHHHHHHHHHHSGG-
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh-cHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCC-
Confidence                         6889999999999999999999999987543 3444456677789999999999999999999988 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++||++|++|
T Consensus       255 ~~~itG~~i~vd  266 (271)
T 4iin_A          255 SSYITGETLKVN  266 (271)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cCCCcCCEEEeC
Confidence            889999999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.4e-41  Score=287.64  Aligned_cols=227  Identities=22%  Similarity=0.306  Sum_probs=188.8

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGA---TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~---~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      ++.+|+||++|||||++|||+++|++|+++|+   +|++++|+...   +.+..+++....  .+.++.++.+|++++++
T Consensus        27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~---~~~~~~~l~~~~--~~~~~~~~~~Dv~d~~~  101 (287)
T 3rku_A           27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK---LEELKKTIDQEF--PNAKVHVAQLDITQAEK  101 (287)
T ss_dssp             HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH---HHHHHHHHHHHC--TTCEEEEEECCTTCGGG
T ss_pred             chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH---HHHHHHHHHhhC--CCCeEEEEECCCCCHHH
Confidence            34679999999999999999999999999998   99999998544   444444443311  25678899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccC
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWH  190 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~  190 (272)
                      ++++++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+
T Consensus       102 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~  181 (287)
T 3rku_A          102 IKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA  181 (287)
T ss_dssp             HHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC
Confidence            999999999999999999999998654578889999999999999999999999999999965  589999999988877


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--CH-HHHHhhccCCCCCCCCCccchhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--SE-EESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                      .+.              +++++.|++++||+||+|+||+|+|++.....  .. .....+....|    .+|+|+|++++
T Consensus       182 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p----~~pedvA~~v~  257 (287)
T 3rku_A          182 YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP----LMADDVADLIV  257 (287)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCC----EEHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCC----CCHHHHHHHHH
Confidence            654              68999999999999999999999999742211  11 22222333333    38999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      ||+++. ..+++|+++.+|
T Consensus       258 ~l~s~~-~~~i~g~~i~v~  275 (287)
T 3rku_A          258 YATSRK-QNTVIADTLIFP  275 (287)
T ss_dssp             HHHTSC-TTEEEEEEEEEE
T ss_pred             HHhCCC-CCeEecceEEee
Confidence            999998 899999999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2e-39  Score=272.27  Aligned_cols=218  Identities=31%  Similarity=0.423  Sum_probs=186.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|++|||||++|||++++++|+++|++|++++|+...   +.+..++       .  .+.++.+|++++++++++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~--~~~~~~~D~~~~~~~~~~~~   69 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP---LREAAEA-------V--GAHPVVMDVADPASVERGFA   69 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHT-------T--TCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------c--CCEEEEecCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997433   2222211       1  27789999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||.. ..+.+.   
T Consensus        70 ~~~~~~g~id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~  147 (245)
T 1uls_A           70 EALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQAN  147 (245)
T ss_dssp             HHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchh
Confidence            99999999999999999854 467889999999999999999999999999999965  47999999987 555433   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 +++++.|++++||+||+|+||+++|++... ..++..+.+....|.+++.+|+|+|+.++||+++. +.
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~-~~  225 (245)
T 1uls_A          148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE-SS  225 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG-GT
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCch-hc
Confidence                       689999999999999999999999998754 34444444555678889999999999999999987 88


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      ++||++|.+|
T Consensus       226 ~~tG~~~~vd  235 (245)
T 1uls_A          226 FITGQVLFVD  235 (245)
T ss_dssp             TCCSCEEEES
T ss_pred             CCcCCEEEEC
Confidence            9999999987

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.2e-39  Score=275.99  Aligned_cols=227  Identities=28%  Similarity=0.378  Sum_probs=186.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++...  ..+.++.++.+|+++++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~   77 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREK---LEAAASRIASL--VSGAQVDIVAGDIREPGDIDRLF   77 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH--STTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhc--CCCCeEEEEEccCCCHHHHHHHH
Confidence            45889999999999999999999999999999999998543   33333344321  01337888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++ +|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        78 ~~~~~~~g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  155 (260)
T 2z1n_A           78 EKARDLGG-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLA  155 (260)
T ss_dssp             HHHHHTTC-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHhcC-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCc
Confidence            99999998 999999999854 467888999999999999999999999999999965  489999999987766543  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCC---------CCCHHH-HHhhccCCCCCCCCCccchhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS---------SFSEEE-SAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                  ++.++.|++++||+||+|+||++.|++...         ....+. ...+....|.+++.+|+|+|+.
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  235 (260)
T 2z1n_A          156 LSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASV  235 (260)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence                        689999999999999999999999998751         111121 2344556788999999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++||+++. +.++||++|++|
T Consensus       236 v~~l~s~~-~~~~tG~~i~vd  255 (260)
T 2z1n_A          236 VAFLASEK-ASFITGAVIPVD  255 (260)
T ss_dssp             HHHHTSGG-GTTCCSCEEEES
T ss_pred             HHHHhCcc-ccCCCCCEEEeC
Confidence            99999987 889999999987

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=7.9e-40  Score=276.98  Aligned_cols=226  Identities=28%  Similarity=0.412  Sum_probs=191.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++..    .+.++.++.+|+++++++++++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   77 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE---LNDCLTQWRS----KGFKVEASVCDLSSRSERQELM   77 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998443   3344444433    3557888999999999999999


Q ss_pred             HHHHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.+ +++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        78 ~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  156 (260)
T 2ae2_A           78 NTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE  156 (260)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHcCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc
Confidence            9999999 89999999999854 467888999999999999999999999999999965  479999999887766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHH---hhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESA---QFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                                   +++++.|++++||+||+|+||+++|++...... .+..+   .+....|.+++.+|+|+|+.++||+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~  236 (260)
T 2ae2_A          157 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence                         688999999999999999999999997532111 22222   4455678899999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|++|
T Consensus       237 s~~-~~~~tG~~~~vd  251 (260)
T 2ae2_A          237 FPA-ASYVTGQIIYVD  251 (260)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Ccc-ccCCCCCEEEEC
Confidence            987 889999999987

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.5e-40  Score=280.14  Aligned_cols=217  Identities=29%  Similarity=0.460  Sum_probs=187.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+++|+||++|||||++|||+++|++|+++|++|++++|+....                  .....+.+|+++.+++++
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------------------~~~~~~~~Dv~~~~~~~~   83 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI------------------AADLHLPGDLREAAYADG   83 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS------------------CCSEECCCCTTSHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------------HhhhccCcCCCCHHHHHH
Confidence            35679999999999999999999999999999999999874332                  122456899999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++  .|+||++||.++..+.+.
T Consensus        84 ~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  162 (266)
T 3uxy_A           84 LPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG  162 (266)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT
T ss_pred             HHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC
Confidence            99999999999999999999965 468889999999999999999999999999999975  689999999988877654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC------CCHHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS------FSEEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                                    +++++.|++++||+||+|+||+|+|++....      ...+....+....|.+++.+|+|+|++++
T Consensus       163 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  242 (266)
T 3uxy_A          163 HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVL  242 (266)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                          6899999999999999999999999975321      11233355677889999999999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      ||+++. +.++||++|++|
T Consensus       243 ~L~s~~-~~~itG~~i~vd  260 (266)
T 3uxy_A          243 FLASDA-ARYLCGSLVEVN  260 (266)
T ss_dssp             HHHSGG-GTTCCSCEEEES
T ss_pred             HHhCch-hcCCcCCEEEEC
Confidence            999998 899999999987

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.4e-39  Score=276.46  Aligned_cols=229  Identities=29%  Similarity=0.412  Sum_probs=192.3

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           34 YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        34 ~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      .....++.+|++|||||++|||++++++|+++|++|++++++.  .+.+.+..+++..    .+.++.++.+|+++++++
T Consensus        18 ~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~--~~~~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~   91 (267)
T 4iiu_A           18 LYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD--AAGAQETLNAIVA----NGGNGRLLSFDVANREQC   91 (267)
T ss_dssp             -------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHH
T ss_pred             hhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHh----cCCceEEEEecCCCHHHH
Confidence            3345678999999999999999999999999999997765442  3344444555544    567889999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc---cCCeEEEecCCCCccC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN---EGSAIINTTSVEPLWH  190 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~---~~g~iv~vsS~~~~~~  190 (272)
                      +++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.+++.|.   +.++||++||..+..+
T Consensus        92 ~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  170 (267)
T 4iiu_A           92 REVLEHEIAQHGAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG  170 (267)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHhCCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC
Confidence            9999999999999999999999865 46888999999999999999999999999988874   3589999999877666


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      .+.              +++++.|++++||+||+|+||+|+|++....  .+.........|.+++.+|+|+|++++||+
T Consensus       171 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~~~~~~~edva~~~~~L~  248 (267)
T 4iiu_A          171 NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPMKRMGQAEEVAGLASYLM  248 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            544              6889999999999999999999999997543  455556667789999999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|++|
T Consensus       249 s~~-~~~itG~~i~vd  263 (267)
T 4iiu_A          249 SDI-AGYVTRQVISIN  263 (267)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             CCc-ccCccCCEEEeC
Confidence            988 889999999987

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.3e-40  Score=276.02  Aligned_cols=218  Identities=25%  Similarity=0.241  Sum_probs=183.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ||++|||||++|||++++++|+++|  ++|++++|+...   +.+..+++       +.++.++.+|++|++++++++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~---~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~   71 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP---LKKLKEKY-------GDRFFYVVGDITEDSVLKQLVNA   71 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHH---HHHHHHHH-------GGGEEEEESCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHH---HHHHHHHh-------CCceEEEECCCCCHHHHHHHHHH
Confidence            7899999999999999999999995  788888887433   33322222       34678899999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +.+.+|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.+.     
T Consensus        72 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~  151 (254)
T 3kzv_A           72 AVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYG  151 (254)
T ss_dssp             HHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHH
T ss_pred             HHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHH
Confidence            99999999999999998655578899999999999999999999999999999965 689999999988776554     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--------CHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--------SEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                               +++++.|+  .||+||+|+||+++|++.....        .++..+.+....|.+++.+|+|+|++++||+
T Consensus       152 asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~  229 (254)
T 3kzv_A          152 SSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLA  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHH
Confidence                     67788887  6899999999999999875432        3455566677789999999999999999999


Q ss_pred             ccCCC-CcccceeeccC
Q 039897          257 CNHCS-SYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~-~~~tG~~i~id  272 (272)
                      ++. . .++||++|++|
T Consensus       230 s~~-~~~~itG~~i~vd  245 (254)
T 3kzv_A          230 LHG-IPDGVNGQYLSYN  245 (254)
T ss_dssp             HHC-CCGGGTTCEEETT
T ss_pred             hhc-ccCCCCccEEEec
Confidence            987 5 89999999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=9.3e-40  Score=275.43  Aligned_cols=222  Identities=18%  Similarity=0.153  Sum_probs=171.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++|++|||||++|||++++++|+++|++|++++|+....+.+   .+++..    .+.++.++.+|++++++++++
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~----~~~~~~~~~~Dv~~~~~v~~~   74 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPL---VAEIEA----AGGRIVARSLDARNEDEVTAF   74 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH---HHHHHH----TTCEEEEEECCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHh----cCCeEEEEECcCCCHHHHHHH
Confidence            4568999999999999999999999999999999999986554444   444443    466789999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+. +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||..+..+.+. 
T Consensus        75 ~~~~~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  152 (252)
T 3h7a_A           75 LNAADAH-APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF  152 (252)
T ss_dssp             HHHHHHH-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTC
T ss_pred             HHHHHhh-CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCC
Confidence            9999999 99999999999965 578899999999999999999999999999999965  589999999988777654 


Q ss_pred             -------------HHHHHHHHhhCCeEE-EEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRV-NGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~v-n~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   +++++.|++++||+| |+|+||+|+|++..... ++....+....|.+ +.+|+|+|++++||++++
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~  230 (252)
T 3h7a_A          153 AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR-EQMFGKDALANPDL-LMPPAAVAGAYWQLYQQP  230 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CCHHHHHHHHHHHHHCC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc-hhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCc
Confidence                         789999999999999 99999999999985542 22333444556666 889999999999999987


Q ss_pred             CCCcccceeec
Q 039897          260 CSSYITGQVLH  270 (272)
Q Consensus       260 ~~~~~tG~~i~  270 (272)
                       ....+||+..
T Consensus       231 -~~~~~~~i~~  240 (252)
T 3h7a_A          231 -KSAWTFEMEI  240 (252)
T ss_dssp             -GGGBCSEEEE
T ss_pred             -hhcceeeEEe
Confidence             7888898764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.7e-39  Score=277.67  Aligned_cols=226  Identities=28%  Similarity=0.452  Sum_probs=185.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC----hHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF----DEN  112 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~  112 (272)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+..  +.+.+..+++..   ..+.++.++.+|+++    +++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~--~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~~~~~   92 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSA--EAAVSLADELNK---ERSNTAVVCQADLTNSNVLPAS   92 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCH--HHHHHHHHHHHH---HSTTCEEEEECCCSCSTTHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCch--HHHHHHHHHHHh---hcCCceEEEEeecCCccCCHHH
Confidence            45689999999999999999999999999999999999851  233333344431   145678899999999    999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCCCCCc-----cc-----CCHHHHHHHHHhhhHHHHHHHHHHHhcccc-------
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYKAGSV-----EE-----IDEERLERVFRTNIFSHFFMTRHSLRHMNE-------  175 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-------  175 (272)
                      ++++++++.+.++++|+||||||+... .++     .+     .+.++|++.+++|+.+++++++.++|.|++       
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  171 (288)
T 2x9g_A           93 CEEIINSCFRAFGRCDVLVNNASAFYP-TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTS  171 (288)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCC-CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------C
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCC-CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCC
Confidence            999999999999999999999998543 455     56     788999999999999999999999999965       


Q ss_pred             -CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCC
Q 039897          176 -GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMK  240 (272)
Q Consensus       176 -~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  240 (272)
                       .++||++||..+..+.+.              +++++.|++++||+||+|+||+|.|++ . . .++....+....|.+
T Consensus       172 ~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~~~~~~~~~~~~p~~  248 (288)
T 2x9g_A          172 SNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-GEEEKDKWRRKVPLG  248 (288)
T ss_dssp             CCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-CHHHHHHHHHTCTTT
T ss_pred             CCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-ChHHHHHHHhhCCCC
Confidence             469999999988766543              688999999999999999999999998 3 2 233334455567888


Q ss_pred             CC-CCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          241 RA-GQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       241 ~~-~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++ .+|+|+|++++||+++. +.++||++|.+|
T Consensus       249 r~~~~pedvA~~v~~l~s~~-~~~itG~~i~vd  280 (288)
T 2x9g_A          249 RREASAEQIADAVIFLVSGS-AQYITGSIIKVD  280 (288)
T ss_dssp             SSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             CCCCCHHHHHHHHHHHhCcc-ccCccCCEEEEC
Confidence            88 99999999999999987 889999999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=6e-40  Score=277.41  Aligned_cols=225  Identities=31%  Similarity=0.487  Sum_probs=189.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|++|||||++|||++++++|+++|++|++++|+... ..+.+..+++..    .+.++.++.+|++++++++++++++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~   75 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE-EQAAETIKLIEA----ADQKAVFVGLDVTDKANFDSAIDEA   75 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGH-HHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHH
Confidence            37899999999999999999999999999999997543 113333444432    3567889999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--C-CeEEEecCCCCccCChh----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--G-SAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~-g~iv~vsS~~~~~~~~~----  193 (272)
                      .+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  . ++||++||..+..+.+.    
T Consensus        76 ~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  154 (258)
T 3a28_C           76 AEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAY  154 (258)
T ss_dssp             HHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhH
Confidence            999999999999999854 467889999999999999999999999999999964  3 89999999887766543    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC--------C--HHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF--------S--EEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                                +++++.|++++||+||+|+||+++|++.....        .  .+..+.+....|.+++.+|+|+|++++
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  234 (258)
T 3a28_C          155 STTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVS  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence                      68899999999999999999999999753211        1  222334455678899999999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      ||+++. +.++||++|.+|
T Consensus       235 ~l~s~~-~~~~tG~~i~vd  252 (258)
T 3a28_C          235 FLASEN-SNYVTGQVMLVD  252 (258)
T ss_dssp             HHHSGG-GTTCCSCEEEES
T ss_pred             HHhCcc-cCCCCCCEEEEC
Confidence            999987 889999999987

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.2e-40  Score=277.63  Aligned_cols=217  Identities=27%  Similarity=0.353  Sum_probs=178.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+   ...+   +       .+.++.++.+|+++++++++++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~---~-------~~~~~~~~~~D~~~~~~v~~~~   71 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVA---D-------LGDRARFAAADVTDEAAVASAL   71 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHH---H-------TCTTEEEEECCTTCHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHH---h-------cCCceEEEECCCCCHHHHHHHH
Confidence            5689999999999999999999999999999999999532   1111   1       3567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCC---CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----------CCeEEEecC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----------GSAIINTTS  184 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----------~g~iv~vsS  184 (272)
                      +.+.+ ++++|+||||||+....   .+..+.+.++|++++++|+.++++++++++|+|++          .|+||++||
T Consensus        72 ~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS  150 (257)
T 3tl3_A           72 DLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTAS  150 (257)
T ss_dssp             HHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECC
T ss_pred             HHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcc
Confidence            98877 89999999999985321   12235899999999999999999999999999965          479999999


Q ss_pred             CCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC-CCCCCccchh
Q 039897          185 VEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVA  249 (272)
Q Consensus       185 ~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva  249 (272)
                      ..+..+.+.              +++++.|++++||+||+|+||+|+|++... ..++....+....|. +++.+|+|+|
T Consensus       151 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~r~~~p~dva  229 (257)
T 3tl3_A          151 VAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPHPSRLGNPDEYG  229 (257)
T ss_dssp             CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSSSCSCBCHHHHH
T ss_pred             hhhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCCCCCccCHHHHH
Confidence            998877654              789999999999999999999999999855 345555566667777 8999999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++||+++   .++||++|++|
T Consensus       230 ~~v~~l~s~---~~itG~~i~vd  249 (257)
T 3tl3_A          230 ALAVHIIEN---PMLNGEVIRLD  249 (257)
T ss_dssp             HHHHHHHHC---TTCCSCEEEES
T ss_pred             HHHHHHhcC---CCCCCCEEEEC
Confidence            999999985   49999999987

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=7e-40  Score=278.41  Aligned_cols=226  Identities=30%  Similarity=0.417  Sum_probs=186.5

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      |.++|+||++|||||++|||++++++|+++|++|++++|+..   .+.+..+++....  ....+.++.+|+++++++++
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~   78 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREE---NVNETIKEIRAQY--PDAILQPVVADLGTEQGCQD   78 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHHHHC--TTCEEEEEECCTTSHHHHHH
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhhC--CCceEEEEecCCCCHHHHHH
Confidence            456799999999999999999999999999999999999844   3444444444321  24567788999999998877


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++    +++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+..+.+.
T Consensus        79 ~~~----~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (267)
T 3t4x_A           79 VIE----KYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE  153 (267)
T ss_dssp             HHH----HCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT
T ss_pred             HHH----hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc
Confidence            664    5789999999999865 468889999999999999999999999999999954  489999999988877654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCC---------CCCH-HHH----HhhccCCCCCCCCCc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS---------SFSE-EES----AQFGSEVPMKRAGQP  245 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~---------~~~~-~~~----~~~~~~~~~~~~~~~  245 (272)
                                    +++++.|++++||+||+|+||+++|++...         .... +..    .......|++++.+|
T Consensus       154 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p  233 (267)
T 3t4x_A          154 MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRP  233 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCT
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCH
Confidence                          789999999999999999999999985421         1111 111    122345678999999


Q ss_pred             cchhhhhhhhhccCCCCcccceeeccC
Q 039897          246 IEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       246 ~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +|+|++++||+++. +.++||++|++|
T Consensus       234 edvA~~v~fL~s~~-~~~itG~~i~vd  259 (267)
T 3t4x_A          234 EEIAHLVTFLSSPL-SSAINGSALRID  259 (267)
T ss_dssp             HHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHHHHHcCcc-ccCccCCeEEEC
Confidence            99999999999988 899999999987

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-40  Score=276.81  Aligned_cols=222  Identities=29%  Similarity=0.439  Sum_probs=188.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++..    .+.++.++.+|++++++++++++++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~   74 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDAT---AKAVASEINQ----AGGHAVAVKVDVSDRDQVFAAVEQAR   74 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            6899999999999999999999999999999998443   3333444433    35678899999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-----
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.+.     
T Consensus        75 ~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  153 (256)
T 1geg_A           75 KTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYS  153 (256)
T ss_dssp             HHTTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHH
Confidence            99999999999999854 467888999999999999999999999999999965   479999999887766543     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----------CHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                               +++++.|++++||+||+|+||+++|++.....          ..+....+....|.+++.+|+|+|++++|
T Consensus       154 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  233 (256)
T 1geg_A          154 SSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSY  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence                     68899999999999999999999999753210          11222344556788999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|.+|
T Consensus       234 l~s~~-~~~~tG~~i~vd  250 (256)
T 1geg_A          234 LASPD-SDYMTGQSLLID  250 (256)
T ss_dssp             HHSGG-GTTCCSCEEEES
T ss_pred             HhCcc-ccCCCCCEEEeC
Confidence            99987 889999999987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.4e-40  Score=282.99  Aligned_cols=220  Identities=25%  Similarity=0.357  Sum_probs=188.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhh----hHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEK----DAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+..+.+    .+++..+++..    .+.++.++.+|+++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v   80 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE----AGGQALPIVGDIRDGDAV   80 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH----HTSEEEEEECCTTSHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh----cCCcEEEEECCCCCHHHH
Confidence            5689999999999999999999999999999999999876432    23444444443    456789999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS  191 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~  191 (272)
                      +++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.
T Consensus        81 ~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  159 (285)
T 3sc4_A           81 AAAVAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK  159 (285)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC
Confidence            9999999999999999999999964 578899999999999999999999999999999975  4799999998877653


Q ss_pred             -hh--------------HHHHHHHHhhCCeEEEEEecc-cccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          192 -PE--------------ARGLALQLVERGIRVNGVAPG-PIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       192 -~~--------------~~~la~e~~~~gi~vn~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                       +.              +++++.|++++||+||+|+|| ++.|++.        ........+.+++.+|+|+|++++||
T Consensus       160 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~--------~~~~~~~~~~~r~~~pedvA~~~~~l  231 (285)
T 3sc4_A          160 WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAV--------QNLLGGDEAMARSRKPEVYADAAYVV  231 (285)
T ss_dssp             GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHH--------HHHHTSCCCCTTCBCTHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHH--------HhhccccccccCCCCHHHHHHHHHHH
Confidence             21              689999999999999999999 6888764        12233455788899999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. + ++||++|.+|
T Consensus       232 ~s~~-~-~~tG~~i~~d  246 (285)
T 3sc4_A          232 LNKP-S-SYTGNTLLCE  246 (285)
T ss_dssp             HTSC-T-TCCSCEEEHH
T ss_pred             hCCc-c-cccceEEEEc
Confidence            9987 6 9999999764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=7.2e-40  Score=277.64  Aligned_cols=228  Identities=28%  Similarity=0.412  Sum_probs=189.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++...   .+.++.++.+|++++++++++
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~   75 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDR---LHEAARSLKEK---FGVRVLEVAVDVATPEGVDAV   75 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH---HCCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHH
Confidence            356889999999999999999999999999999999998443   33333444321   145788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        76 ~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  154 (263)
T 3ai3_A           76 VESVRSSFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYE  154 (263)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc
Confidence            9999999999999999999854 467888999999999999999999999999999964  489999999987766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----------CHHHHHhhccC-CCCCCCCCccchh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSE-VPMKRAGQPIEVA  249 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~dva  249 (272)
                                   +++++.|++++||+||+|+||++.|++.....          .++....+... .|.+++.+|+|+|
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  234 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELA  234 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHH
Confidence                         68899999999999999999999998742210          01112233334 6888999999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++||+++. +.+++|++|++|
T Consensus       235 ~~~~~l~s~~-~~~~~G~~~~vd  256 (263)
T 3ai3_A          235 NFFVFLCSER-ATYSVGSAYFVD  256 (263)
T ss_dssp             HHHHHHTSTT-CTTCCSCEEEES
T ss_pred             HHHHHHcCcc-ccCCCCcEEEEC
Confidence            9999999987 889999999987

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.4e-39  Score=275.49  Aligned_cols=216  Identities=17%  Similarity=0.237  Sum_probs=171.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+++|++|++|||||++|||+++|++|+++|++|++++|+....   .+.   +.+      .++.++.+|+++++++++
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~---~~~------~~~~~~~~Dv~~~~~v~~   88 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS---VTE---LRQ------AGAVALYGDFSCETGIMA   88 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHH---HHH---HHH------HTCEEEECCTTSHHHHHH
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHH---HHH---HHh------cCCeEEECCCCCHHHHHH
Confidence            35779999999999999999999999999999999999986432   222   221      126889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.++++|+||||||+... .. .+.+.++|++++++|+.++++++++++|+|++.  |+||++||..+..+.+.
T Consensus        89 ~~~~~~~~~g~iD~lv~nAg~~~~-~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  166 (260)
T 3gem_A           89 FIDLLKTQTSSLRAVVHNASEWLA-ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK  166 (260)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCC-CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS
T ss_pred             HHHHHHHhcCCCCEEEECCCccCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC
Confidence            999999999999999999998643 23 567889999999999999999999999999764  89999999988776654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|+++ +|+||+|+||++.|++..   ..+....+....|.+++.+|+|+|++++||++  
T Consensus       167 ~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~---~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~--  240 (260)
T 3gem_A          167 HIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD---DAAYRANALAKSALGIEPGAEVIYQSLRYLLD--  240 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC------------------CCSCCCCCTHHHHHHHHHHHH--
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC---CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhh--
Confidence                          6889999988 699999999999998753   22334455667899999999999999999994  


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|++|
T Consensus       241 -~~~itG~~i~vd  252 (260)
T 3gem_A          241 -STYVTGTTLTVN  252 (260)
T ss_dssp             -CSSCCSCEEEES
T ss_pred             -CCCCCCCEEEEC
Confidence             669999999987

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=8.8e-40  Score=278.07  Aligned_cols=225  Identities=22%  Similarity=0.250  Sum_probs=186.7

Q ss_pred             CCCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGG--DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGa--s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +.+|++|++|||||  ++|||++++++|+++|++|++++|+....  +.+    +.+   ..+.++.++.+|++++++++
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~----~~~---~~~~~~~~~~~Dv~~~~~v~   72 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL--IQR----ITD---RLPAKAPLLELDVQNEEHLA   72 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH--HHH----HHT---TSSSCCCEEECCTTCHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH--HHH----HHH---hcCCCceEEEccCCCHHHHH
Confidence            45689999999999  99999999999999999999999974321  111    111   12456889999999999999


Q ss_pred             HHHHHHHHhcC---CccEEEEcccccCC----CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          115 RVVDEVVNAYG---KIDILVNNAAVQYK----AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       115 ~~~~~~~~~~g---~ld~vI~~ag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      ++++++.+.+|   ++|+||||||+...    ..++.+.+.++|++.+++|+.++++++++++|+|+++|+||++||...
T Consensus        73 ~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~  152 (269)
T 2h7i_A           73 SLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS  152 (269)
T ss_dssp             HHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS
T ss_pred             HHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc
Confidence            99999999999   99999999998542    357888999999999999999999999999999988899999999865


Q ss_pred             ccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----CCHH-------HHHhhccCCCCC-C
Q 039897          188 LWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----FSEE-------ESAQFGSEVPMK-R  241 (272)
Q Consensus       188 ~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----~~~~-------~~~~~~~~~~~~-~  241 (272)
                      . +.+.              +++++.|++++||+||+|+||+++|++....    ..++       ..+.+....|.+ +
T Consensus       153 ~-~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr  231 (269)
T 2h7i_A          153 R-AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWN  231 (269)
T ss_dssp             S-CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred             c-ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccC
Confidence            3 3222              6889999999999999999999999875321    1121       112344567888 6


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.+|+|+|++++||+++. +.++||++|.+|
T Consensus       232 ~~~p~dvA~~v~~L~s~~-~~~itG~~i~vd  261 (269)
T 2h7i_A          232 MKDATPVAKTVCALLSDW-LPATTGDIIYAD  261 (269)
T ss_dssp             TTCCHHHHHHHHHHHSSS-CTTCCSEEEEES
T ss_pred             CCCHHHHHHHHHHHhCch-hccCcceEEEec
Confidence            999999999999999988 899999999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.1e-40  Score=279.71  Aligned_cols=226  Identities=30%  Similarity=0.403  Sum_probs=187.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +.++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+ ++.++.+|+++++++++
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~-~~~~~~~Dv~d~~~v~~   94 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEA---CADTATRLSA----YG-DCQAIPADLSSEAGARR   94 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHH---HHHHHHHHTT----SS-CEEECCCCTTSHHHHHH
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cC-ceEEEEeeCCCHHHHHH
Confidence            3456899999999999999999999999999999999997433   3333333321    22 78889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--C----CeEEEecCCCCcc
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--G----SAIINTTSVEPLW  189 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~----g~iv~vsS~~~~~  189 (272)
                      +++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .    ++||++||..+..
T Consensus        95 ~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~  173 (276)
T 2b4q_A           95 LAQALGELSARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS  173 (276)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC
Confidence            99999999999999999999854 367888999999999999999999999999999964  2    7999999987654


Q ss_pred             CCh-----h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhcc--CCCCCCCCCccchhhhh
Q 039897          190 HSP-----E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS--EVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       190 ~~~-----~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~  252 (272)
                      +.+     .          +++++.|++++||+||+|+||+++|++..... .+....+..  ..|.+++.+|+|+|+++
T Consensus       174 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p~dvA~~v  252 (276)
T 2b4q_A          174 AMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIA-NDPQALEADSASIPMGRWGRPEEMAALA  252 (276)
T ss_dssp             CCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHH-HCHHHHHHHHHTSTTSSCCCHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcc-hhHHHHHHhhcCCCCCCcCCHHHHHHHH
Confidence            321     1          68899999999999999999999999853211 111122333  67889999999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+++. +.++||++|.+|
T Consensus       253 ~~l~s~~-~~~~tG~~i~vd  271 (276)
T 2b4q_A          253 ISLAGTA-GAYMTGNVIPID  271 (276)
T ss_dssp             HHHHSGG-GTTCCSCEEEES
T ss_pred             HHHhCcc-ccCCCCCEEEeC
Confidence            9999987 889999999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.4e-39  Score=276.23  Aligned_cols=225  Identities=23%  Similarity=0.321  Sum_probs=189.4

Q ss_pred             CCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +|++|++|||||+  +|||++++++|+++|++|++++|+.+ .   .+..+++.+.    .+++.++.+|++++++++++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~---~~~~~~l~~~----~~~~~~~~~D~~~~~~v~~~   74 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L---EKRVRPIAQE----LNSPYVYELDVSKEEHFKSL   74 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T---HHHHHHHHHH----TTCCCEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H---HHHHHHHHHh----cCCcEEEEcCCCCHHHHHHH
Confidence            5789999999999  99999999999999999999999854 2   2223333221    12478899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+.++++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|.|+++|+||++||..+..+.+.
T Consensus        75 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (275)
T 2pd4_A           75 YNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH  154 (275)
T ss_dssp             HHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT
T ss_pred             HHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC
Confidence            99999999999999999998643   257788999999999999999999999999999987799999999877766543


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|++++||+||+|+||+|+|++...... ++....+....|.+++.+|+|+|+.++||+++
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~  234 (275)
T 2pd4_A          155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS  234 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCc
Confidence                          688999999999999999999999998643222 22333444567888999999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..++||++|++|
T Consensus       235 ~-~~~~tG~~~~vd  247 (275)
T 2pd4_A          235 L-SSGVSGEVHFVD  247 (275)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             c-ccCCCCCEEEEC
Confidence            7 889999999886

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-39  Score=275.79  Aligned_cols=212  Identities=28%  Similarity=0.453  Sum_probs=185.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ++++++|++|||||++|||++++++|+++|++|++++|+....                ...++.++.+|++++++++++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~Dv~d~~~v~~~   86 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS----------------ADPDIHTVAGDISKPETADRI   86 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC----------------SSTTEEEEESCTTSHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc----------------ccCceEEEEccCCCHHHHHHH
Confidence            4678999999999999999999999999999999999985432                234678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++  .++||++||..+..+.+. 
T Consensus        87 ~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  165 (260)
T 3un1_A           87 VREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM  165 (260)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC
T ss_pred             HHHHHHHCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC
Confidence            9999999999999999999864 478889999999999999999999999999999965  479999999876532211 


Q ss_pred             ---------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 ---------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 ---------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                     +++++.|++++||+||+|+||+|+|++...    +....+....|.+++.+|+|+|++++||.  
T Consensus       166 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~----~~~~~~~~~~p~~r~~~~~dva~av~~L~--  239 (260)
T 3un1_A          166 PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA----ETHSTLAGLHPVGRMGEIRDVVDAVLYLE--  239 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG----GGHHHHHTTSTTSSCBCHHHHHHHHHHHH--
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH----HHHHHHhccCCCCCCcCHHHHHHHHHHhc--
Confidence                           689999999999999999999999998642    34455667789999999999999999993  


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.++||++|++|
T Consensus       240 ~-~~~itG~~i~vd  252 (260)
T 3un1_A          240 H-AGFITGEILHVD  252 (260)
T ss_dssp             H-CTTCCSCEEEES
T ss_pred             c-cCCCCCcEEEEC
Confidence            3 679999999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-39  Score=280.94  Aligned_cols=224  Identities=27%  Similarity=0.375  Sum_probs=187.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH-----
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTY-VKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE-----  111 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----  111 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++ |+..   .+.+..+++..   ..+.++.++.+|+++++     
T Consensus        42 ~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~---~~~~~~~~l~~---~~~~~~~~~~~Dl~d~~~~~~~  115 (328)
T 2qhx_A           42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA---EANALSATLNA---RRPNSAITVQADLSNVATAPVS  115 (328)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHH---HSTTCEEEEECCCSSSCBCC--
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHHHh---hcCCeEEEEEeeCCCchhcccc
Confidence            458999999999999999999999999999999999 8743   33444444431   14567889999999999     


Q ss_pred             ------------HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCC--------------HHHHHHHHHhhhHHHHHH
Q 039897          112 ------------NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEID--------------EERLERVFRTNIFSHFFM  165 (272)
Q Consensus       112 ------------~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l  165 (272)
                                  +++++++++.+.++++|+||||||+.. ..++.+.+              .++|+.++++|+.+++++
T Consensus       116 ~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l  194 (328)
T 2qhx_A          116 GADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFL  194 (328)
T ss_dssp             -----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence                        999999999999999999999999854 36777777              999999999999999999


Q ss_pred             HHHHHhcccc--------CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCC
Q 039897          166 TRHSLRHMNE--------GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS  223 (272)
Q Consensus       166 ~~~~~~~~~~--------~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~  223 (272)
                      +++++|.|++        .++||++||..+..+.+.              ++.++.|++++||+||+|+||+|+|++ ..
T Consensus       195 ~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~  273 (328)
T 2qhx_A          195 IKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM  273 (328)
T ss_dssp             HHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS
T ss_pred             HHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc
Confidence            9999999964        479999999988776544              789999999999999999999999999 32


Q ss_pred             CCCHHHHHhhccCCCCC-CCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          224 SFSEEESAQFGSEVPMK-RAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       224 ~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                       . ++....+....|++ ++.+|+|+|++++||+++. +.++||++|.+|
T Consensus       274 -~-~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~-~~~itG~~i~vd  320 (328)
T 2qhx_A          274 -P-PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK-AKYITGTCVKVD  320 (328)
T ss_dssp             -C-HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             -c-HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCcc-ccCccCcEEEEC
Confidence             2 34444455667888 8999999999999999987 889999999987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=5.9e-39  Score=275.19  Aligned_cols=227  Identities=25%  Similarity=0.366  Sum_probs=187.9

Q ss_pred             CCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +.+|+||++|||||+  +|||++++++|+++|++|++++|+.+    ..+..+++.+.    .+++.++.+|++++++++
T Consensus        16 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~l~~~----~~~~~~~~~Dl~~~~~v~   87 (285)
T 2p91_A           16 MGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK----LEKRVREIAKG----FGSDLVVKCDVSLDEDIK   87 (285)
T ss_dssp             -CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG----GHHHHHHHHHH----TTCCCEEECCTTCHHHHH
T ss_pred             hhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHHHh----cCCeEEEEcCCCCHHHHH
Confidence            345899999999999  99999999999999999999999853    22223333321    123788999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc-cCCeEEEecCCCCccC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN-EGSAIINTTSVEPLWH  190 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~g~iv~vsS~~~~~~  190 (272)
                      ++++++.+.+|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|.|+ ++++||++||..+..+
T Consensus        88 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~  167 (285)
T 2p91_A           88 NLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV  167 (285)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC
Confidence            9999999999999999999998543   25677899999999999999999999999999997 4689999999877665


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .+.              +++++.|++++||+||+|+||+|+|++...... .+....+....|.+++.+|+|+|++++||
T Consensus       168 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l  247 (285)
T 2p91_A          168 VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFL  247 (285)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            443              688999999999999999999999998644322 22333444567888999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|++|
T Consensus       248 ~s~~-~~~~tG~~~~vd  263 (285)
T 2p91_A          248 CSDW-ARAITGEVVHVD  263 (285)
T ss_dssp             TSGG-GTTCCSCEEEES
T ss_pred             cCCc-ccCCCCCEEEEC
Confidence            9987 889999999886

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.8e-39  Score=275.02  Aligned_cols=226  Identities=27%  Similarity=0.335  Sum_probs=189.5

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+|++|++|||||+  +|||++++++|+++|++|++++|+.+    ..+..+++.+.    ...+.++.+|+++++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~l~~~----~~~~~~~~~D~~~~~~v~~   75 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER----LRPEAEKLAEA----LGGALLFRADVTQDEELDA   75 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG----GHHHHHHHHHH----TTCCEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH----HHHHHHHHHHh----cCCcEEEECCCCCHHHHHH
Confidence            45889999999999  99999999999999999999999753    22223333221    1237889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+.++++|+||||||+...   ..++.+.+.++|++.+++|+.+++++++++.|.|+++|+||++||..+..+.+
T Consensus        76 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  155 (261)
T 2wyu_A           76 LFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP  155 (261)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC
Confidence            999999999999999999998542   25778899999999999999999999999999998778999999987766544


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++++.|++++||+||+|+||+|+|++...... ++....+....|.+++.+|+|+|++++||++
T Consensus       156 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s  235 (261)
T 2wyu_A          156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLS  235 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            3              688899999999999999999999998643222 2333444556788999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|++|
T Consensus       236 ~~-~~~~tG~~~~vd  249 (261)
T 2wyu_A          236 PL-ASGITGEVVYVD  249 (261)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             hh-hcCCCCCEEEEC
Confidence            87 889999999987

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.1e-39  Score=278.56  Aligned_cols=227  Identities=32%  Similarity=0.391  Sum_probs=191.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.+    .+.++.++.+|++++++++++
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dv~~~~~v~~~   89 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEG---LRTTLKELRE----AGVEADGRTCDVRSVPEIEAL   89 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCceEEEECCCCCHHHHHHH
Confidence            346899999999999999999999999999999999998543   3333444443    356788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhc--ccc--CCeEEEecCCCCccCCh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRH--MNE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~--~g~iv~vsS~~~~~~~~  192 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.  |++  .++||++||..+..+.+
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  168 (277)
T 2rhc_B           90 VAAVVERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV  168 (277)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCC
Confidence            9999999999999999999854 467888999999999999999999999999998  854  48999999998776654


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC----C------HHHHHhhccCCCCCCCCCccch
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF----S------EEESAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~dv  248 (272)
                      .              +++++.|++++||+||+|+||+++|++.....    .      ++....+....|.+++.+|+|+
T Consensus       169 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv  248 (277)
T 2rhc_B          169 HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV  248 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHH
Confidence            3              68889999999999999999999999753211    0      1222334455788899999999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |++++||+++. +.++||++|++|
T Consensus       249 A~~v~~l~s~~-~~~~tG~~~~vd  271 (277)
T 2rhc_B          249 AEMVAYLIGPG-AAAVTAQALNVC  271 (277)
T ss_dssp             HHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHHhCch-hcCCCCcEEEEC
Confidence            99999999987 889999999987

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=5.7e-39  Score=273.91  Aligned_cols=224  Identities=29%  Similarity=0.483  Sum_probs=183.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh----HH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV-KSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD----EN  112 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~  112 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++| +..   .+.+..+++...   .+.++.++.+|+++.    ++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~   80 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG---AAQRLVAELNAA---RAGSAVLCKGDLSLSSSLLDC   80 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHHH---STTCEEEEECCCSSSTTHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChH---HHHHHHHHHHHh---cCCceEEEeccCCCccccHHH
Confidence            3478999999999999999999999999999999999 633   334444444331   245788999999999    99


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCH-----------HHHHHHHHhhhHHHHHHHHHHHhcccc-C----
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE-----------ERLERVFRTNIFSHFFMTRHSLRHMNE-G----  176 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~-~----  176 (272)
                      ++++++++.+.++++|+||||||+.. ..++.+.+.           ++|++++++|+.++++++++++|.|++ .    
T Consensus        81 ~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~  159 (276)
T 1mxh_A           81 CEDIIDCSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRS  159 (276)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------C
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999854 467777888           999999999999999999999999963 3    


Q ss_pred             --CeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCC
Q 039897          177 --SAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMK  240 (272)
Q Consensus       177 --g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  240 (272)
                        ++||++||..+..+.+.              +++++.|++++||+||+|+||++.|+  . ...++....+....|.+
T Consensus       160 ~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~-~~~~~~~~~~~~~~p~~  236 (276)
T 1mxh_A          160 RNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--P-AMPQETQEEYRRKVPLG  236 (276)
T ss_dssp             CCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--S-SSCHHHHHHHHTTCTTT
T ss_pred             CCcEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--c-cCCHHHHHHHHhcCCCC
Confidence              79999999988766544              68899999999999999999999999  2 23444444455567888


Q ss_pred             C-CCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          241 R-AGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       241 ~-~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      + +.+|+|+|++++||+++. ..++||++|++|
T Consensus       237 r~~~~~~dva~~v~~l~s~~-~~~~tG~~~~vd  268 (276)
T 1mxh_A          237 QSEASAAQIADAIAFLVSKD-AGYITGTTLKVD  268 (276)
T ss_dssp             SCCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             CCCCCHHHHHHHHHHHhCcc-ccCccCcEEEEC
Confidence            8 899999999999999987 889999999987

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.5e-39  Score=274.70  Aligned_cols=226  Identities=23%  Similarity=0.328  Sum_probs=187.9

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+|++|++|||||+  +|||++++++|+++|++|++++|+.+    ..+..+++...    .....++.+|+++++++++
T Consensus         5 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~l~~~----~~~~~~~~~D~~~~~~v~~   76 (265)
T 1qsg_A            5 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK----LKGRVEEFAAQ----LGSDIVLQCDVAEDASIDT   76 (265)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT----THHHHHHHHHH----TTCCCEEECCTTCHHHHHH
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHH----HHHHHHHHHHh----cCCcEEEEccCCCHHHHHH
Confidence            34889999999999  99999999999999999999999852    22223333221    1234789999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCC---CCCccc-CCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYK---AGSVEE-IDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS  191 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~  191 (272)
                      +++++.+.++++|+||||||+...   ..++.+ .+.++|++.+++|+.++++++++++|.|+++|+||++||..+..+.
T Consensus        77 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  156 (265)
T 1qsg_A           77 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI  156 (265)
T ss_dssp             HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC
Confidence            999999999999999999998542   256677 8999999999999999999999999999877899999998776654


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      +.              +++++.|++++||+||+|+||+++|++...... .+....+....|.+++.+|+|+|++++||+
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~  236 (265)
T 1qsg_A          157 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC  236 (265)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            43              688999999999999999999999998643222 223334445578889999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|++|
T Consensus       237 s~~-~~~~tG~~~~vd  251 (265)
T 1qsg_A          237 SDL-SAGISGEVVHVD  251 (265)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Cch-hcCccCCEEEEC
Confidence            987 889999999987

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.6e-39  Score=272.69  Aligned_cols=226  Identities=32%  Similarity=0.457  Sum_probs=193.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .|++|++|||||++|||++++++|+++|++|++++++.  .+.+.+...++..    .+.++.++.+|+++.++++++++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   77 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR--KEEAEETVYEIQS----NGGSAFSIGANLESLHGVEALYS   77 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--SHHHHHHHHHHHH----TTCEEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHHHHHh----cCCceEEEecCcCCHHHHHHHHH
Confidence            47899999999999999999999999999999874432  2334444444443    46678899999999999999999


Q ss_pred             HHHHhcC------CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          119 EVVNAYG------KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       119 ~~~~~~g------~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      .+.+.++      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++++||++||..+..+.+
T Consensus        78 ~~~~~~~~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~  156 (255)
T 3icc_A           78 SLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP  156 (255)
T ss_dssp             HHHHHHHHHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT
T ss_pred             HHHHHhcccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC
Confidence            9988764      4999999999854 46788899999999999999999999999999998889999999998887765


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHH-HHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE-ESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              +++++.|++++||+||+|+||+++|++........ .........+.+++.+|+|+|++++||++
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  236 (255)
T 3icc_A          157 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS  236 (255)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhC
Confidence            5              68899999999999999999999999987654433 34455667888999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|++|
T Consensus       237 ~~-~~~~tG~~i~vd  250 (255)
T 3icc_A          237 PD-SRWVTGQLIDVS  250 (255)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             cc-cCCccCCEEEec
Confidence            88 899999999987

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=8.1e-39  Score=271.13  Aligned_cols=228  Identities=24%  Similarity=0.294  Sum_probs=179.3

Q ss_pred             CCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEecc
Q 039897           27 PQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISAD  106 (272)
Q Consensus        27 ~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  106 (272)
                      ++......+.+.++++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|
T Consensus        14 ~~~~~~~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D   86 (262)
T 3rkr_A           14 SGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK---LRAVEREIVA----AGGEAESHACD   86 (262)
T ss_dssp             -----------CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCEEEEEECC
T ss_pred             cCCCCCCcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHH----hCCceeEEEec
Confidence            3334444555678999999999999999999999999999999999998444   4444444443    46678899999


Q ss_pred             CCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecC
Q 039897          107 LGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTS  184 (272)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS  184 (272)
                      ++++++++++++++.+.++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||
T Consensus        87 ~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS  166 (262)
T 3rkr_A           87 LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISS  166 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence            999999999999999999999999999998555578899999999999999999999999999999854  589999999


Q ss_pred             CCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhh
Q 039897          185 VEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       185 ~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                      ..+..+.+.              +++++.|++++||+||+|+||+|+|++.....         ...+..+..+|+|+|+
T Consensus       167 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~p~dvA~  237 (262)
T 3rkr_A          167 LAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS---------AKKSALGAIEPDDIAD  237 (262)
T ss_dssp             SCSSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------CCCHHHHHH
T ss_pred             hhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc---------cccccccCCCHHHHHH
Confidence            988877654              67899999999999999999999999864321         1234556779999999


Q ss_pred             hhhhhhccCCCCcccceeecc
Q 039897          251 CYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +++||+++. ...++||++..
T Consensus       238 ~v~~l~s~~-~~~~~g~~~i~  257 (262)
T 3rkr_A          238 VVALLATQA-DQSFISEVLVR  257 (262)
T ss_dssp             HHHHHHTCC-TTCCEEEEEEE
T ss_pred             HHHHHhcCc-cccccCcEEec
Confidence            999999998 88999998754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2e-39  Score=282.80  Aligned_cols=226  Identities=26%  Similarity=0.364  Sum_probs=186.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc-------chhhhHHHHHHHHHHhhhcCCCCceEEeccCC
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS-------QEEKDAQETLEILREAKTSDAKDPMAISADLG  108 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (272)
                      ++.+|+||++|||||++|||+++|++|+++|++|++++|+.       +..+.+.+..+++..    .+.++.++.+|++
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~   96 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA----AGGEAVADGSNVA   96 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH----TTCEEEEECCCTT
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh----cCCcEEEEECCCC
Confidence            45679999999999999999999999999999999999871       113344444555544    4667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeEE
Q 039897          109 FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAII  180 (272)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~iv  180 (272)
                      ++++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++++++++.|+|++        +|+||
T Consensus        97 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV  175 (322)
T 3qlj_A           97 DWDQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRII  175 (322)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEE
Confidence            999999999999999999999999999965 468899999999999999999999999999999864        27999


Q ss_pred             EecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCcc
Q 039897          181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPI  246 (272)
Q Consensus       181 ~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (272)
                      ++||..+..+.+.              +++++.|++++||+||+|+|| +.|++..........    ......+..+|+
T Consensus       176 ~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~----~~~~~~~~~~pe  250 (322)
T 3qlj_A          176 NTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA----TQDQDFDAMAPE  250 (322)
T ss_dssp             EECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------CCTTCGG
T ss_pred             EEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh----ccccccCCCCHH
Confidence            9999876655443              789999999999999999999 999987654432221    112223456899


Q ss_pred             chhhhhhhhhccCCCCcccceeeccC
Q 039897          247 EVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       247 dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+|++++||+++. +.++||++|++|
T Consensus       251 dva~~v~~L~s~~-~~~itG~~i~vd  275 (322)
T 3qlj_A          251 NVSPLVVWLGSAE-ARDVTGKVFEVE  275 (322)
T ss_dssp             GTHHHHHHHTSGG-GGGCCSCEEEEE
T ss_pred             HHHHHHHHHhCcc-ccCCCCCEEEEC
Confidence            9999999999998 889999999986

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.2e-39  Score=272.80  Aligned_cols=221  Identities=21%  Similarity=0.298  Sum_probs=178.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++|++|||||++|||++++++|+++|++|++++|+....   .+..+++.+... ...++.++.+|++++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~   77 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNL---EKVHDEIMRSNK-HVQEPIVLPLDITDCTKADTE   77 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHH---HHHHHHHHHHCT-TSCCCEEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHHHHHhcc-ccCcceEEeccCCCHHHHHHH
Confidence            3468899999999999999999999999999999999985444   444444433210 226788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||+.. ..++ +.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+.+. 
T Consensus        78 ~~~~~~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (250)
T 3nyw_A           78 IKDIHQKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADG  155 (250)
T ss_dssp             HHHHHHHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCT
T ss_pred             HHHHHHhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCC
Confidence            9999999999999999999864 3556 7789999999999999999999999999964  589999999987763221 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.|++++||+||+|+||+|+|++...         .....+.+++.+|+|+|++++||++++.
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---------~~~~~~~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKK---------AGTPFKDEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH---------TTCCSCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhh---------cCCCcccccCCCHHHHHHHHHHHHcCCC
Confidence                         789999999999999999999999987422         2234566778899999999999999875


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|.+|.+|
T Consensus       227 ~~~~~~~~i~vd  238 (250)
T 3nyw_A          227 NVCIKDIVFEMK  238 (250)
T ss_dssp             TEECCEEEEEEH
T ss_pred             ceEeeEEEEEee
Confidence            667788888876

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=4e-39  Score=275.64  Aligned_cols=242  Identities=21%  Similarity=0.322  Sum_probs=187.8

Q ss_pred             CCCCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhc
Q 039897           16 QPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS   95 (272)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~   95 (272)
                      .|+..+++.+++..-+.++...++++||++|||||++|||++++++|+++|++|++++|+...   +.+..+++      
T Consensus         4 ~~~~~~~~~~~~~~gp~~m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~---~~~~~~~~------   74 (281)
T 3ppi_A            4 HHHHHMGTLEAQTQGPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEK---GKALADEL------   74 (281)
T ss_dssp             --------------------CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHH------
T ss_pred             CCCcccCCCCCcccCcchhhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHHh------
Confidence            355566666666666666667788999999999999999999999999999999999998443   33333332      


Q ss_pred             CCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCc-----ccCCHHHHHHHHHhhhHHHHHHHHHHH
Q 039897           96 DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSV-----EEIDEERLERVFRTNIFSHFFMTRHSL  170 (272)
Q Consensus        96 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~  170 (272)
                       +.++.++.+|++++++++++++.+ +.++++|+||||++.......+     .+.+.++|++.+++|+.+++++++.++
T Consensus        75 -~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  152 (281)
T 3ppi_A           75 -GNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVA  152 (281)
T ss_dssp             -CTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             -CCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence             457889999999999999999999 8889999999994432333333     468899999999999999999999999


Q ss_pred             hcccc--------CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHH
Q 039897          171 RHMNE--------GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE  228 (272)
Q Consensus       171 ~~~~~--------~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~  228 (272)
                      +.|++        .|+||++||..+..+.+.              +++++.|++++||+||+|+||+|+|++... ..++
T Consensus       153 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~  231 (281)
T 3ppi_A          153 ASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEE  231 (281)
T ss_dssp             HHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHH
T ss_pred             HHHHhhcccccCCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHH
Confidence            99853        579999999988877654              688999999999999999999999998754 3455


Q ss_pred             HHHhhccCCCC-CCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          229 ESAQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       229 ~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ....+....+. +++.+|+|+|++++||+++   .++||++|++|
T Consensus       232 ~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~---~~~tG~~i~vd  273 (281)
T 3ppi_A          232 ALAKFAANIPFPKRLGTPDEFADAAAFLLTN---GYINGEVMRLD  273 (281)
T ss_dssp             HHHHHHHTCCSSSSCBCHHHHHHHHHHHHHC---SSCCSCEEEES
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHHHHcC---CCcCCcEEEEC
Confidence            55566667777 8899999999999999985   49999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-38  Score=267.14  Aligned_cols=219  Identities=26%  Similarity=0.415  Sum_probs=184.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccC--CChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADL--GFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~  115 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+...   +.+..+++...   ...+..++.+|+  ++.+++++
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~~d~d~~~~~~~~~   83 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEAS---LAEVSDQIKSA---GQPQPLIIALNLENATAQQYRE   83 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHT---TSCCCEEEECCTTTCCHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHH---HHHHHHHHHhc---CCCCceEEEeccccCCHHHHHH
Confidence            56899999999999999999999999999999999998544   44444444432   235667777777  99999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.++++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|+|++  .++||++||..+..+.+.
T Consensus        84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  163 (247)
T 3i1j_A           84 LAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN  163 (247)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC
Confidence            999999999999999999998655678899999999999999999999999999999966  479999999888776654


Q ss_pred             --------------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|+.+ .||+||+|+||+++|++.....         ......+...|+|+|+.++||+++
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~p~dva~~~~~l~s~  234 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAY---------PDENPLNNPAPEDIMPVYLYLMGP  234 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHS---------TTSCGGGSCCGGGGTHHHHHHHSG
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcc---------cccCccCCCCHHHHHHHHHHHhCc
Confidence                          6889999987 8999999999999998742211         111223567899999999999999


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      + +.++||++|++.
T Consensus       235 ~-~~~itG~~i~~~  247 (247)
T 3i1j_A          235 D-STGINGQALNAQ  247 (247)
T ss_dssp             G-GTTCCSCEEECC
T ss_pred             h-hccccCeeecCC
Confidence            8 899999999863

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-39  Score=273.30  Aligned_cols=227  Identities=23%  Similarity=0.328  Sum_probs=181.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++.+|++|||||++|||++++++|+++|++|++++++....  .....+.+..    .+.++.++.+|+++++++++++
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~   76 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTA--METMKETYKD----VEERLQFVQADVTKKEDLHKIV   76 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHHHHHTGG----GGGGEEEEECCTTSHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHH--HHHHHHHHHh----cCCceEEEEecCCCHHHHHHHH
Confidence            456789999999999999999999999999999998874332  2222222221    3457889999999999999999


Q ss_pred             HHHHHhcCCccEEEEccccc-CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCC--ccCCh
Q 039897          118 DEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEP--LWHSP  192 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~--~~~~~  192 (272)
                      +++.+.++++|+||||||+. ....++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||...  ..+.+
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  156 (264)
T 3i4f_A           77 EEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWI  156 (264)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCT
T ss_pred             HHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCC
Confidence            99999999999999999942 33467889999999999999999999999999999965  489999998733  22222


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      .              +++++.|++++||+||+|+||+|.|++.... .++....+....|.+++.+|+|+|++++||+++
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~  235 (264)
T 3i4f_A          157 YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHNTPIGRSGTGEDIARTISFLCED  235 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC--------CCCCHHHHHHHHHHHHSG
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            1              6889999999999999999999999987543 344445566778999999999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..++||++|++|
T Consensus       236 ~-~~~itG~~i~vd  248 (264)
T 3i4f_A          236 D-SDMITGTIIEVT  248 (264)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             c-cCCCCCcEEEEc
Confidence            8 889999999987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-39  Score=278.83  Aligned_cols=228  Identities=29%  Similarity=0.427  Sum_probs=188.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCC---CceEEeccCCChHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK---DPMAISADLGFDENC  113 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~  113 (272)
                      +++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.+    .+.   ++.++.+|+++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~~~~Dv~d~~~v   93 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDR---LEETKQQILK----AGVPAEKINAVVADVTEASGQ   93 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCCGGGEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCCCceEEEEecCCCCHHHH
Confidence            456899999999999999999999999999999999998443   4444444433    233   678899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCC--cccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGS--VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWH  190 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~  190 (272)
                      +++++++.+.+|++|+||||||+.. ..+  +.+.+.++|++++++|+.++++++++++|.|++ +|+||++||..+..+
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~  172 (297)
T 1xhl_A           94 DDIINTTLAKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ  172 (297)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccC
Confidence            9999999999999999999999854 345  888999999999999999999999999999964 489999999887765


Q ss_pred             C-hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CH-------HHHHhhccCCCCCCCCCccc
Q 039897          191 S-PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SE-------EESAQFGSEVPMKRAGQPIE  247 (272)
Q Consensus       191 ~-~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~d  247 (272)
                      . +.              +++++.|++++||+||+|+||+|+|++..... ..       +....+....|.+++.+|+|
T Consensus       173 ~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  252 (297)
T 1xhl_A          173 AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEE  252 (297)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHH
Confidence            5 33              68899999999999999999999999854321 11       12234455678899999999


Q ss_pred             hhhhhhhhhccCCCCcccceeeccC
Q 039897          248 VAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       248 va~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +|++++||+++..+.++||++|.+|
T Consensus       253 vA~~v~~l~s~~~~~~itG~~i~vd  277 (297)
T 1xhl_A          253 IANIIVFLADRNLSSYIIGQSIVAD  277 (297)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHHHHhCCcccCCccCcEEEEC
Confidence            9999999997532458999999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-39  Score=271.85  Aligned_cols=220  Identities=36%  Similarity=0.546  Sum_probs=184.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+... +..   .+++      .  + .++.+|+++++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~---~~~~------~--~-~~~~~D~~~~~~~~~~~   68 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEV---AEAI------G--G-AFFQVDLEDERERVRFV   68 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHH---HHHH------T--C-EEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHH---HHHh------h--C-CEEEeeCCCHHHHHHHH
Confidence            45889999999999999999999999999999999998544 222   2222      1  3 78899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        69 ~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  147 (256)
T 2d1y_A           69 EEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENA  147 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCh
Confidence            999999999999999999854 467888999999999999999999999999999965  479999999887766543  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----C-CHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----F-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                                  +++++.|++++||+||+|+||+++|++....    . .++....+....|.+++.+|+|+|++++||+
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~  227 (256)
T 2d1y_A          148 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence                        6889999999999999999999999874221    1 1121223445678889999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.+++|++|++|
T Consensus       228 s~~-~~~~~G~~~~v~  242 (256)
T 2d1y_A          228 SEK-ASFITGAILPVD  242 (256)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Cch-hcCCCCCEEEEC
Confidence            987 889999999987

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=9.9e-39  Score=272.04  Aligned_cols=218  Identities=25%  Similarity=0.324  Sum_probs=166.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.++.+|++|||||++|||++++++|+++|++|++++|+.+   .+.+..+++       +.++.++.+|++++++++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~   92 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLD---ALQETAAEI-------GDDALCVPTDVTDPDSVRAL   92 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHH-------TSCCEEEECCTTSHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHh-------CCCeEEEEecCCCHHHHHHH
Confidence            45688999999999999999999999999999999999843   333333332       35788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----CCeEEEecCCCCccCCh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~g~iv~vsS~~~~~~~~  192 (272)
                      ++++.+.+|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|++    +|+||++||..+..+.+
T Consensus        93 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~  172 (272)
T 4dyv_A           93 FTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP  172 (272)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC
Confidence            99999999999999999999655578899999999999999999999999999999965    47999999998887765


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      .              +++++.|++++||+||+|+||+|+|++.......  ........+.+++.+|+|+|++++||++.
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~pedvA~~v~fL~s~  250 (272)
T 4dyv_A          173 YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG--VPQADLSIKVEPVMDVAHVASAVVYMASL  250 (272)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------CHHHHHHHHHHHHHS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc--chhhhhcccccCCCCHHHHHHHHHHHhCC
Confidence            4              7899999999999999999999999987543221  11223346777889999999999999998


Q ss_pred             CCCCcccc
Q 039897          259 HCSSYITG  266 (272)
Q Consensus       259 ~~~~~~tG  266 (272)
                      +....+++
T Consensus       251 ~~~~~~~~  258 (272)
T 4dyv_A          251 PLDANVQF  258 (272)
T ss_dssp             CTTSCCCE
T ss_pred             CCcCccce
Confidence            73434333

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=4.8e-39  Score=273.16  Aligned_cols=219  Identities=20%  Similarity=0.298  Sum_probs=183.7

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +...+.+|++|||||++|||++++++|+++|++|++++|+.+..+.+             ...++.++.+|++|++++++
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------------~~~~~~~~~~Dv~d~~~v~~   76 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------------NLPNTLCAQVDVTDKYTFDT   76 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------------CCTTEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------------hcCCceEEEecCCCHHHHHH
Confidence            34568899999999999999999999999999999999974322111             23467889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||.++..+.+.
T Consensus        77 ~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  155 (266)
T 3p19_A           77 AITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD  155 (266)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC
Confidence            99999999999999999999864 478889999999999999999999999999999965  589999999988877654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhcc-CCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-EVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|++++||+||+|+||+|+|++.......+....+.. ..|.+++.+|+|+|++++||+++
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~  235 (266)
T 3p19_A          156 HAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQ  235 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHS
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcC
Confidence                          689999999999999999999999999765544433332222 34788899999999999999998


Q ss_pred             CCCCcccceee
Q 039897          259 HCSSYITGQVL  269 (272)
Q Consensus       259 ~~~~~~tG~~i  269 (272)
                      + ....+++++
T Consensus       236 ~-~~~~~~~i~  245 (266)
T 3p19_A          236 P-QNVCIREIA  245 (266)
T ss_dssp             C-TTEEEEEEE
T ss_pred             C-CCccceeeE
Confidence            8 777787765

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.2e-38  Score=268.18  Aligned_cols=216  Identities=24%  Similarity=0.338  Sum_probs=170.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+....                .. .+.++.+|++|++++++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~-~~~~~~~D~~d~~~~~~~~   65 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE----------------QY-PFATEVMDVADAAQVAQVC   65 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS----------------CC-SSEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh----------------cC-CceEEEcCCCCHHHHHHHH
Confidence            358899999999999999999999999999999999975310                11 2788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        66 ~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  144 (250)
T 2fwm_X           66 QRLLAETERLDALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMS  144 (250)
T ss_dssp             HHHHHHCSCCCEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCc
Confidence            999999999999999999854 467888999999999999999999999999999965  589999999987766543  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHH-hhcc-------CCCCCCCCCccchhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESA-QFGS-------EVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~-~~~~-------~~~~~~~~~~~dva~~~  252 (272)
                                  +++++.|++++||+||+|+||+++|++...... ++..+ .+..       ..|.+++.+|+|+|+++
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  224 (250)
T 2fwm_X          145 AYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTI  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHH
Confidence                        688999999999999999999999998643211 11112 2222       56788899999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+++. +.++||++|.+|
T Consensus       225 ~~l~s~~-~~~~tG~~i~vd  243 (250)
T 2fwm_X          225 LFLASDL-ASHITLQDIVVD  243 (250)
T ss_dssp             HHHHSGG-GTTCCSCEEEES
T ss_pred             HHHhCcc-ccCCCCCEEEEC
Confidence            9999987 889999999987

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-39  Score=272.81  Aligned_cols=222  Identities=32%  Similarity=0.469  Sum_probs=186.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++       +.++.++.+|++++++++++++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~   72 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAA---GQQLAAEL-------GERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHH---HHHHHHHH-------CTTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHc-------CCceEEEEccCCCHHHHHHHHH
Confidence            5889999999999999999999999999999999997433   33333222       3567889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~----  193 (272)
                      .+.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++ +++||++||..+..+.+.    
T Consensus        73 ~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  151 (253)
T 1hxh_A           73 AVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGY  151 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccH
Confidence            99999999999999999854 467888999999999999999999999999999965 489999999988766543    


Q ss_pred             ----------HHHHHHHHhhC--CeEEEEEecccccCCCCCCCCCHHHHHh-hcc---CCCCCCCCCccchhhhhhhhhc
Q 039897          194 ----------ARGLALQLVER--GIRVNGVAPGPIWTPLIPSSFSEEESAQ-FGS---EVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 ----------~~~la~e~~~~--gi~vn~i~PG~v~t~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                +++++.|++++  ||+||+|+||++.|++......++.... +..   ..|.+++.+|+|+|++++||++
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s  231 (253)
T 1hxh_A          152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcC
Confidence                      67889999888  9999999999999987432111111112 333   5678889999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|.+|
T Consensus       232 ~~-~~~~tG~~~~vd  245 (253)
T 1hxh_A          232 DE-SSVMSGSELHAD  245 (253)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             cc-ccCCCCcEEEEC
Confidence            87 889999999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=3.5e-39  Score=272.24  Aligned_cols=223  Identities=26%  Similarity=0.372  Sum_probs=187.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|++|||||++|||++++++|+++|++|++++|+..  +   ...+++..    .+.++.++.+|++++++++++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~---~~~~~l~~----~~~~~~~~~~D~~~~~~v~~~~~   71 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--A---PALAEIAR----HGVKAVHHPADLSDVAQIEALFA   71 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--H---HHHHHHHT----TSCCEEEECCCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--H---HHHHHHHh----cCCceEEEeCCCCCHHHHHHHHH
Confidence            368999999999999999999999999999999999754  2   22233322    35578889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||.++..+.+.   
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (255)
T 2q2v_A           72 LAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAA  150 (255)
T ss_dssp             HHHHHHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchh
Confidence            99999999999999999854 467888999999999999999999999999999965  379999999987766543   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHH---H----Hhh-ccCCCCCCCCCccchhhhh
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEE---S----AQF-GSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~---~----~~~-~~~~~~~~~~~~~dva~~~  252 (272)
                                 +++++.|++++||+||+|+||++.|++......  .+.   .    ..+ ....|.+++.+|+|+|+++
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  230 (255)
T 2q2v_A          151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence                       688999999999999999999999997532110  111   1    223 5567888999999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+++. +.++||++|++|
T Consensus       231 ~~l~s~~-~~~~tG~~~~vd  249 (255)
T 2q2v_A          231 LFLCSEA-GSQVRGAAWNVD  249 (255)
T ss_dssp             HHHTSGG-GTTCCSCEEEES
T ss_pred             HHHhCCc-cCCCCCCEEEEC
Confidence            9999987 889999999987

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.5e-38  Score=264.98  Aligned_cols=221  Identities=26%  Similarity=0.375  Sum_probs=183.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+..   .+.+..+++..    .+.++.++.+|+++++++++++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~----~~~~~~~~~~Dv~~~~~~~~~~   75 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVE---KLRALGDELTA----AGAKVHVLELDVADRQGVDAAV   75 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHH
Confidence            3588999999999999999999999999999999999844   34444444443    3567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~---  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++ +|+||++||..+..+.+.   
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (247)
T 2jah_A           76 ASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAV  154 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcH
Confidence            999999999999999999854 468889999999999999999999999999999954 589999999988766543   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCC--CCccchhhhhhhhhccCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRA--GQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~L~s~~~  260 (272)
                                 +++++.|++++||+||+|+||+++|++............+ ...| +++  .+|+|+|+.++||+++. 
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~-~~~~~~~pedvA~~v~~l~s~~-  231 (247)
T 2jah_A          155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMY-EQRI-SQIRKLQAQDIAEAVRYAVTAP-  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHH-HHHT-TTSCCBCHHHHHHHHHHHHHSC-
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHH-Hhcc-cccCCCCHHHHHHHHHHHhCCC-
Confidence                       6889999999999999999999999986443222221111 1223 444  79999999999999987 


Q ss_pred             CCcccceee
Q 039897          261 SSYITGQVL  269 (272)
Q Consensus       261 ~~~~tG~~i  269 (272)
                      ..++++++.
T Consensus       232 ~~~~~~~i~  240 (247)
T 2jah_A          232 HHATVHEIF  240 (247)
T ss_dssp             TTEEEEEEE
T ss_pred             ccCccceEE
Confidence            778887753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-39  Score=275.46  Aligned_cols=226  Identities=28%  Similarity=0.428  Sum_probs=187.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCC---CceEEeccCCChHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK---DPMAISADLGFDENCKR  115 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~  115 (272)
                      +|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.   ++.++.+|+++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~   75 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER---LEETRQIILK----SGVSEKQVNSVVADVTTEDGQDQ   75 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHT----TTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHH----cCCCCcceEEEEecCCCHHHHHH
Confidence            5889999999999999999999999999999999998443   3343444432    233   67889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCC----cccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGS----VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWH  190 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~  190 (272)
                      +++++.+.++++|+||||||+... .+    +.+.+.++|++.+++|+.+++++++++.|.|++ +++||++||..+..+
T Consensus        76 ~~~~~~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  154 (280)
T 1xkq_A           76 IINSTLKQFGKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ  154 (280)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC-CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCC-CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCC
Confidence            999999999999999999998543 45    788999999999999999999999999999964 589999999877665


Q ss_pred             C-hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CH-------HHHHhhccCCCCCCCCCccc
Q 039897          191 S-PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SE-------EESAQFGSEVPMKRAGQPIE  247 (272)
Q Consensus       191 ~-~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~d  247 (272)
                      . +.              +++++.|++++||+||+|+||+++|++..... ..       +....+....|.+++.+|+|
T Consensus       155 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ped  234 (280)
T 1xkq_A          155 AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEH  234 (280)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHH
Confidence            4 32              68899999999999999999999999854321 11       12234445678899999999


Q ss_pred             hhhhhhhhhccCCCCcccceeeccC
Q 039897          248 VAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       248 va~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +|++++||+++..+.++||++|++|
T Consensus       235 vA~~v~~l~s~~~~~~~tG~~i~vd  259 (280)
T 1xkq_A          235 IANIILFLADRNLSFYILGQSIVAD  259 (280)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHHHhcCcccccCccCCeEEEC
Confidence            9999999997531458999999987

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.8e-39  Score=272.82  Aligned_cols=221  Identities=29%  Similarity=0.409  Sum_probs=185.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.   +.+..++       .+.++.++.+|++++++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   71 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEE---GAATARE-------LGDAARYQHLDVTIEEDWQRVVA   71 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHT-------TGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------hCCceeEEEecCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997433   3222222       13457789999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..+.+.   
T Consensus        72 ~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1hdc_A           72 YAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSS  150 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchh
Confidence            99999999999999999854 467888999999999999999999999999999965  589999999887766543   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCC-CccchhhhhhhhhccCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAG-QPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~L~s~~~~  261 (272)
                                 +++++.|++++||+||+|+||++.|++.... ..+....+....|.+++. +|+|+|+.++||+++. +
T Consensus       151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~-~  228 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET-GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT-S  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH-TCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG-G
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccccc-chhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCch-h
Confidence                       6889999999999999999999999874221 011112233456778888 9999999999999987 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++||++|.+|
T Consensus       229 ~~~tG~~~~vd  239 (254)
T 1hdc_A          229 SYVTGAELAVD  239 (254)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCCCCEEEEC
Confidence            89999999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-39  Score=274.82  Aligned_cols=224  Identities=23%  Similarity=0.315  Sum_probs=177.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+++||++|||||++|||+++|++|+++|++|++++|+...   +.+..+++...   ....+.++.+|++|++++++++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~  102 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDV---LDAAAGEIGGR---TGNIVRAVVCDVGDPDQVAALF  102 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH---HSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhc---CCCeEEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998544   34444444332   2333588999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----CCeEEEecCCCCccCChh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~g~iv~vsS~~~~~~~~~  193 (272)
                      +++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++    +|+||++||..+..+.+.
T Consensus       103 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  182 (281)
T 4dry_A          103 AAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN  182 (281)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC
Confidence            9999999999999999998655578899999999999999999999999999999965    479999999988777654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|++++||+||+|+||+|+|++........  .......+.+++.+|+|+|++++||++.+
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~fL~s~~  260 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV--LQANGEVAAEPTIPIEHIAEAVVYMASLP  260 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE--ECTTSCEEECCCBCHHHHHHHHHHHHHSC
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh--hhhhhcccccCCCCHHHHHHHHHHHhCCC
Confidence                          68999999999999999999999999875432211  11223455677889999999999999987


Q ss_pred             CCCcccceee
Q 039897          260 CSSYITGQVL  269 (272)
Q Consensus       260 ~~~~~tG~~i  269 (272)
                      ....+++.+|
T Consensus       261 ~~~~i~~~~i  270 (281)
T 4dry_A          261 LSANVLTMTV  270 (281)
T ss_dssp             TTEEEEEEEE
T ss_pred             ccCccccEEE
Confidence            4555655554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-39  Score=274.54  Aligned_cols=222  Identities=27%  Similarity=0.453  Sum_probs=184.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+....   .+..+++        .++.++.+|+++++++++++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~   73 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG---RALEQEL--------PGAVFILCDVTQEDDVKTLV   73 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHC--------TTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHHh--------cCCeEEEcCCCCHHHHHHHH
Confidence            458899999999999999999999999999999999974332   2222211        23678999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~---  193 (272)
                      +++.+.++++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+..+.+.   
T Consensus        74 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  153 (270)
T 1yde_A           74 SETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVP  153 (270)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcc
Confidence            9999999999999999998654467888999999999999999999999999999864 689999999876555433   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCC---CC-H-HHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS---FS-E-EESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~---~~-~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                 +++++.|++++||+||+|+||++.|++....   .. . ..........|++++.+|+|+|+.++||++
T Consensus       154 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s  233 (270)
T 1yde_A          154 YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS  233 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcc
Confidence                       6889999999999999999999999874221   11 1 112222345788999999999999999998


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +  +.++||++|.+|
T Consensus       234 ~--~~~itG~~i~vd  246 (270)
T 1yde_A          234 E--ANFCTGIELLVT  246 (270)
T ss_dssp             H--CTTCCSCEEEES
T ss_pred             c--CCCcCCCEEEEC
Confidence            6  579999999987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-38  Score=269.26  Aligned_cols=219  Identities=25%  Similarity=0.307  Sum_probs=173.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|++|||||++|||+++|++|+++|++|++++|+..   .+.+..+++..    .+.++.++.+|+++++++++++++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~   74 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQA---RIEAIATEIRD----AGGTALAQVLDVTDRHSVAAFAQA   74 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999844   44444455544    466788999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||.++..+.+.    
T Consensus        75 ~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y  153 (264)
T 3tfo_A           75 AVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVY  153 (264)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHH
T ss_pred             HHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhH
Confidence            9999999999999999954 578899999999999999999999999999999964  589999999988877654    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.|+ + ||+||+|+||+|+|++.......+......  .......+|+|+|++++||+++. ..+
T Consensus       154 ~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~-~~~  228 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMD--TYRAIALQPADIARAVRQVIEAP-QSV  228 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-------------------------CCCHHHHHHHHHHHHHSC-TTE
T ss_pred             HHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHH--hhhccCCCHHHHHHHHHHHhcCC-ccC
Confidence                      67888887 4 999999999999999975432222111111  11123468999999999999998 889


Q ss_pred             ccceeecc
Q 039897          264 ITGQVLHP  271 (272)
Q Consensus       264 ~tG~~i~i  271 (272)
                      .+|+++..
T Consensus       229 ~~~~i~i~  236 (264)
T 3tfo_A          229 DTTEITIR  236 (264)
T ss_dssp             EEEEEEEE
T ss_pred             ccceEEEe
Confidence            99988753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.2e-39  Score=272.90  Aligned_cols=229  Identities=30%  Similarity=0.453  Sum_probs=178.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.... ..+.++.++.+|+++++++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~   77 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAER---LEETRQQILAAG-VSEQNVNSVVADVTTDAGQDEIL   77 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTT-CCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhcc-cCCCceeEEecccCCHHHHHHHH
Confidence            35789999999999999999999999999999999998443   333333332111 12446788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccC----CHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCC-ccCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEI----DEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEP-LWHS  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~-~~~~  191 (272)
                      +++.+.+|++|+||||||+.. ..++.+.    +.++|++.+++|+.++++++++++|.|++ +++||++||..+ ..+.
T Consensus        78 ~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~  156 (278)
T 1spx_A           78 STTLGKFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT  156 (278)
T ss_dssp             HHHHHHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCC
Confidence            999999999999999999854 3566777    99999999999999999999999999965 589999999987 6554


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHH------HHhhccCCCCCCCCCccchh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEE------SAQFGSEVPMKRAGQPIEVA  249 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~dva  249 (272)
                      +.              +++++.|++++||+||+|+||++.|++......  ...      ...+....|.+++.+|+|+|
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  236 (278)
T 1spx_A          157 PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIA  236 (278)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHH
Confidence            43              688899999999999999999999998643211  111      23334456788999999999


Q ss_pred             hhhhhhhccCCCCc-ccceeeccC
Q 039897          250 PCYVFLACNHCSSY-ITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~-~tG~~i~id  272 (272)
                      ++++||+++. ..+ +||++|++|
T Consensus       237 ~~v~~l~s~~-~~~~~tG~~~~vd  259 (278)
T 1spx_A          237 EVIAFLADRK-TSSYIIGHQLVVD  259 (278)
T ss_dssp             HHHHHHHCHH-HHTTCCSCEEEES
T ss_pred             HHHHHHcCcc-ccCcccCcEEEEC
Confidence            9999999876 566 999999887

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.2e-39  Score=272.38  Aligned_cols=224  Identities=29%  Similarity=0.414  Sum_probs=187.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..++       ...++.++.+|++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~D~~d~~~v~~~   76 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMA---AQAVVAG-------LENGGFAVEVDVTKRASVDAA   76 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHT-------CTTCCEEEECCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------HhcCCeEEEEeCCCHHHHHHH
Confidence            456889999999999999999999999999999999997433   2222221       122678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+.+|++|+||||||+.. ..++.+.+.++|+..+++|+.+++++++++.|.|++   .++||++||..+..+.+.
T Consensus        77 ~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  155 (263)
T 3ak4_A           77 MQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL  155 (263)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC
Confidence            9999999999999999999854 467888999999999999999999999999999854   489999999887766543


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-----C-----HHHHHhhccCCCCCCCCCccchh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-----S-----EEESAQFGSEVPMKRAGQPIEVA  249 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~dva  249 (272)
                                    +++++.|++++||+||+|+||++.|++.....     .     ++....+....|.+++.+|+|+|
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  235 (263)
T 3ak4_A          156 LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVA  235 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence                          68889999999999999999999998753211     0     12223345567888999999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++||+++. +.+++|++|++|
T Consensus       236 ~~v~~l~s~~-~~~~tG~~~~vd  257 (263)
T 3ak4_A          236 DVVVFLASDA-ARFMTGQGINVT  257 (263)
T ss_dssp             HHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHhCcc-ccCCCCCEEEEC
Confidence            9999999987 889999999987

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=9.3e-39  Score=269.47  Aligned_cols=215  Identities=32%  Similarity=0.449  Sum_probs=177.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..                  ..+.++.+|++|+++++++
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------------~~~~~~~~Dl~d~~~v~~~   77 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------------EGFLAVKCDITDTEQVEQA   77 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------TTSEEEECCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------------ccceEEEecCCCHHHHHHH
Confidence            3568899999999999999999999999999999999975432                  1267899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        78 ~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  156 (253)
T 2nm0_A           78 YKEIEETHGPVEVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQ  156 (253)
T ss_dssp             HHHHHHHTCSCSEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCc
Confidence            9999999999999999999854 467788899999999999999999999999999964  589999999988766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.|++++||+||+|+||+++|++.... .++....+....|.+++.+|+|+|+.++||+++. 
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~-  234 (253)
T 2nm0_A          157 ANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL-TDEQRANIVSQVPLGRYARPEEIAATVRFLASDD-  234 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-
Confidence                         6888999999999999999999999986432 2222334445678889999999999999999987 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++||++|.+|
T Consensus       235 ~~~~tG~~i~vd  246 (253)
T 2nm0_A          235 ASYITGAVIPVD  246 (253)
T ss_dssp             GTTCCSCEEEES
T ss_pred             ccCCcCcEEEEC
Confidence            889999999987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=2e-38  Score=268.47  Aligned_cols=217  Identities=33%  Similarity=0.509  Sum_probs=184.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.   +.+..+++       ..++.++.+|+++++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~   72 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEE---GKAMAAEL-------ADAARYVHLDVTQPAQWKAAV   72 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHT-------GGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHh-------hcCceEEEecCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998433   32222222       123678899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        73 ~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  151 (260)
T 1nff_A           73 DTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACH  151 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCch
Confidence            999999999999999999854 467888999999999999999999999999999965  589999999987766543  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.|++++||+||+|+||++.|++..  ...+   .+. ..|.+++.+|+|+|++++||+++. .
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~---~~~-~~~~~~~~~~~dvA~~v~~l~s~~-~  224 (260)
T 1nff_A          152 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVPE---DIF-QTALGRAAEPVEVSNLVVYLASDE-S  224 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSCT---TCS-CCSSSSCBCHHHHHHHHHHHHSGG-G
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cchh---hHH-hCccCCCCCHHHHHHHHHHHhCcc-c
Confidence                        67889999999999999999999999853  1111   122 567788899999999999999987 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|+++++|
T Consensus       225 ~~~~G~~~~v~  235 (260)
T 1nff_A          225 SYSTGAEFVVD  235 (260)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCEEEEC
Confidence            89999999986

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.7e-39  Score=271.26  Aligned_cols=212  Identities=29%  Similarity=0.405  Sum_probs=182.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYAL-EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~-~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .++|++|||||++|||++++++|++ .|++|++++|+...                 ...++.++.+|++++++++++++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------------~~~~~~~~~~Dv~~~~~v~~~~~   64 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------------SAENLKFIKADLTKQQDITNVLD   64 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------------CCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------------ccccceEEecCcCCHHHHHHHHH
Confidence            4689999999999999999999999 79999999887442                 23456889999999999999996


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+.  ++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++++.|.|+++++||++||..+..+.+.     
T Consensus        65 ~~~--~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  141 (244)
T 4e4y_A           65 IIK--NVSFDGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYT  141 (244)
T ss_dssp             HTT--TCCEEEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHH
T ss_pred             HHH--hCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhH
Confidence            554  689999999999965 368889999999999999999999999999999988899999999988777654     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----------HHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----------EEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                               +++++.|++++||+||+|+||+|+|++......          ++....+....|.+++.+|+|+|++++|
T Consensus       142 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  221 (244)
T 4e4y_A          142 LSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIF  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence                     789999999999999999999999997532211          1134455677899999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. +.++||++|++|
T Consensus       222 l~s~~-~~~itG~~i~vd  238 (244)
T 4e4y_A          222 LLSDK-SKFMTGGLIPID  238 (244)
T ss_dssp             HHSGG-GTTCCSCEEEES
T ss_pred             HhcCc-cccccCCeEeEC
Confidence            99988 889999999987

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.4e-37  Score=265.63  Aligned_cols=228  Identities=25%  Similarity=0.368  Sum_probs=190.3

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           35 KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        35 ~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      ...++|++|++|||||++|||++++++|+++|++|++++|+....+.+.+.+   ..    .+.++.++.+|+++.++++
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~----~~~~~~~~~~Dl~~~~~~~   99 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ---KT----YGVHSKAYKCNISDPKSVE   99 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHH---HH----HCSCEEEEECCTTCHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---Hh----cCCcceEEEeecCCHHHHH
Confidence            3346799999999999999999999999999999999999866544443332   22    2457889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcc-cCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccC-
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVE-EIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWH-  190 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~-  190 (272)
                      ++++++.+.++++|+||||||+.....++. +.+.++|++.+++|+.+++++++.+++.|++  .++||++||..+..+ 
T Consensus       100 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  179 (279)
T 3ctm_A          100 ETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN  179 (279)
T ss_dssp             HHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-
T ss_pred             HHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC
Confidence            999999999999999999999864325666 7889999999999999999999999999965  589999999987765 


Q ss_pred             -Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          191 -SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 -~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                       .+.              +++++.|++++| +||+|+||+++|++... ...+....+....|.+++.+|+|+|+.++||
T Consensus       180 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  257 (279)
T 3ctm_A          180 IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-ASKDMKAKWWQLTPLGREGLTQELVGGYLYL  257 (279)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-CCHHHHHHHHHHSTTCSCBCGGGTHHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-cChHHHHHHHHhCCccCCcCHHHHHHHHHHH
Confidence             222              678889999999 99999999999998743 3344444455567888999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. ..+++|++|++|
T Consensus       258 ~s~~-~~~~tG~~i~vd  273 (279)
T 3ctm_A          258 ASNA-STFTTGSDVVID  273 (279)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             hCcc-ccCccCCEEEEC
Confidence            9987 889999999987

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.1e-38  Score=278.48  Aligned_cols=219  Identities=20%  Similarity=0.269  Sum_probs=185.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhh----HHHHHHHHHHhhhcCCCCceEEeccCCChH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD----AQETLEILREAKTSDAKDPMAISADLGFDE  111 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (272)
                      ...+|+||++|||||++|||+++|++|+++|++|++++|+....++    +.+..+++..    .+.++.++.+|++|++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~----~g~~~~~~~~Dv~d~~  114 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA----VGGKALPCIVDVRDEQ  114 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH----TTCEEEEEECCTTCHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh----cCCeEEEEEccCCCHH
Confidence            3567999999999999999999999999999999999998765332    3444444444    5678899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc
Q 039897          112 NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW  189 (272)
Q Consensus       112 ~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~  189 (272)
                      +++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..
T Consensus       115 ~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~  193 (346)
T 3kvo_A          115 QISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLN  193 (346)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcC
Confidence            999999999999999999999999864 478889999999999999999999999999999976  38999999998776


Q ss_pred             C--Chh--------------HHHHHHHHhhCCeEEEEEeccc-ccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhh
Q 039897          190 H--SPE--------------ARGLALQLVERGIRVNGVAPGP-IWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       190 ~--~~~--------------~~~la~e~~~~gi~vn~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                      +  .+.              +++++.|++ +||+||+|+||+ ++|++.         +.+....+.++..+|+|+|+++
T Consensus       194 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~---------~~~~~~~~~~r~~~pedvA~~v  263 (346)
T 3kvo_A          194 PVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAM---------DMLGGPGIESQCRKVDIIADAA  263 (346)
T ss_dssp             GGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHH---------HHHCC--CGGGCBCTHHHHHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHH---------HhhccccccccCCCHHHHHHHH
Confidence            5  222              788999999 899999999995 888753         2333445677888999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+++  +.++||++| +|
T Consensus       264 ~~L~s~--~~~itG~~i-vd  280 (346)
T 3kvo_A          264 YSIFQK--PKSFTGNFV-ID  280 (346)
T ss_dssp             HHHHTS--CTTCCSCEE-EH
T ss_pred             HHHHhc--CCCCCceEE-EC
Confidence            999987  679999998 65

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=2.9e-38  Score=265.45  Aligned_cols=214  Identities=31%  Similarity=0.435  Sum_probs=178.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+....+                  .+..+.+|+++++++++++
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------------~~~~~~~D~~~~~~~~~~~   72 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------------GLFGVEVDVTDSDAVDRAF   72 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------------TSEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------------------HhcCeeccCCCHHHHHHHH
Confidence            4588999999999999999999999999999999999754321                  1224889999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        73 ~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  151 (247)
T 1uzm_A           73 TAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQA  151 (247)
T ss_dssp             HHHHHHHSSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCCh
Confidence            999999999999999999854 467888999999999999999999999999999965  489999999987765443  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.|++++||+||+|+||+++|++... ...+....+....|.+++.+|+|+|+.++||+++. .
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~-~  229 (247)
T 1uzm_A          152 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFIPAKRVGTPAEVAGVVSFLASED-A  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGG-G
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc-c
Confidence                        688999999999999999999999997533 23333444556678889999999999999999987 8


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|++|++|
T Consensus       230 ~~~~G~~i~vd  240 (247)
T 1uzm_A          230 SYISGAVIPVD  240 (247)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCEEEEC
Confidence            89999999987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.6e-37  Score=263.38  Aligned_cols=226  Identities=28%  Similarity=0.388  Sum_probs=166.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|+++++++++++
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   82 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE---LNECLSKWQK----KGFQVTGSVCDASLRPEREKLM   82 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCeeEEEECCCCCHHHHHHHH
Confidence            56889999999999999999999999999999999997443   3344444433    3557889999999999999999


Q ss_pred             HHHHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.|.|++  .++||++||..+..+.+. 
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  161 (266)
T 1xq1_A           83 QTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG  161 (266)
T ss_dssp             HHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C
T ss_pred             HHHHHHhCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCC
Confidence            9999998 89999999999854 467788899999999999999999999999999865  589999999887655433 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.+++++||+||+|+||++.|++......+.....+....|.+++.+|+|+|+++++|+++. 
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  240 (266)
T 1xq1_A          162 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA-  240 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGG-
T ss_pred             chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc-
Confidence                         678889999999999999999999998754332222333444567788899999999999999987 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.+++|++|++|
T Consensus       241 ~~~~~G~~~~v~  252 (266)
T 1xq1_A          241 ASYITGQTICVD  252 (266)
T ss_dssp             GTTCCSCEEECC
T ss_pred             ccCccCcEEEEc
Confidence            789999999987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=5.6e-38  Score=261.90  Aligned_cols=209  Identities=21%  Similarity=0.255  Sum_probs=168.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++       +.++.++.+|+++++++++++++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~   70 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQR---LQQQELLL-------GNAVIGIVADLAHHEDVDVAFAA   70 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHH-------GGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHh-------cCCceEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999998443   33333333       12478899999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++ +++||++||..+..+.+.     
T Consensus        71 ~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  149 (235)
T 3l6e_A           71 AVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYC  149 (235)
T ss_dssp             HHHHHCSCSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHH
T ss_pred             HHHhcCCCcEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHH
Confidence            9999999999999999954 468889999999999999999999999999999966 469999999988877654     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcc
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI  264 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~  264 (272)
                               +++++.|++++||+||+|+||+|+|++......          .+..++.+|+|+|+.++||++.+...++
T Consensus       150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~pedvA~~v~~l~~~~~~~~i  219 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------VDPSGFMTPEDAAAYMLDALEARSSCHV  219 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------CBCHHHHHHHHHHHTCCCSSEEE
T ss_pred             HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----------CCCcCCCCHHHHHHHHHHHHhCCCCcce
Confidence                     689999999999999999999999998643211          2334678999999999999986547788


Q ss_pred             cceee
Q 039897          265 TGQVL  269 (272)
Q Consensus       265 tG~~i  269 (272)
                      +|-.+
T Consensus       220 ~~i~~  224 (235)
T 3l6e_A          220 TDLFI  224 (235)
T ss_dssp             EEEEE
T ss_pred             eeEEE
Confidence            88654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-38  Score=264.81  Aligned_cols=220  Identities=29%  Similarity=0.469  Sum_probs=171.8

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..++++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++       ..++.++.+|+++.+++.+
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~D~~~~~~~~~   77 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEK---LKSLGNAL-------KDNYTIEVCNLANKEECSN   77 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHH-------CSSEEEEECCTTSHHHHHH
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHh-------ccCccEEEcCCCCHHHHHH
Confidence            3567999999999999999999999999999999999997443   33333322       3467889999999999888


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++    ++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+.
T Consensus        78 ~~~~----~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  152 (249)
T 3f9i_A           78 LISK----TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG  152 (249)
T ss_dssp             HHHT----CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC
T ss_pred             HHHh----cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC
Confidence            7764    478999999999865 356777889999999999999999999999999954  579999999988876654


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|++++||+||+|+||+|.|++... ..++....+....|.+++.+|+|+|++++||+++.
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  231 (249)
T 3f9i_A          153 QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK-LNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNN  231 (249)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence                          688999999999999999999999999754 34555566667789999999999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|++|
T Consensus       232 -~~~~tG~~~~vd  243 (249)
T 3f9i_A          232 -ASYITGQTLHVN  243 (249)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -cCCccCcEEEEC
Confidence             889999999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=3.6e-38  Score=267.44  Aligned_cols=214  Identities=31%  Similarity=0.526  Sum_probs=184.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+...                  +.++.++.+|+++++++++++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------------~~~~~~~~~Dl~~~~~v~~~~   65 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------------EAKYDHIECDVTNPDQVKASI   65 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------------SCSSEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------------CCceEEEEecCCCHHHHHHHH
Confidence            35889999999999999999999999999999999997432                  346788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        66 ~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  144 (264)
T 2dtx_A           66 DHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNAS  144 (264)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCch
Confidence            999999999999999999854 467888999999999999999999999999999975  489999999987766543  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC------CH----HHHHhhccCCCCCCCCCccchhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF------SE----EESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                  +++++.|+++. |+||+|+||+++|++.....      ..    +....+....|.+++.+|+|+|++
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  223 (264)
T 2dtx_A          145 AYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                        68889999988 99999999999998753210      12    222334455788899999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++||+++. +.+++|++|.+|
T Consensus       224 v~~l~s~~-~~~~tG~~i~vd  243 (264)
T 2dtx_A          224 VAFLASRE-ASFITGTCLYVD  243 (264)
T ss_dssp             HHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHhCch-hcCCCCcEEEEC
Confidence            99999987 889999999887

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.9e-38  Score=268.27  Aligned_cols=226  Identities=19%  Similarity=0.202  Sum_probs=184.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHH---cCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYAL---EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~---~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      ++|++|++|||||++|||++++++|++   +|++|++++|+...   +.+..+++....  .+.++.++.+|++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~---~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~   76 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM---LRQLKEELGAQQ--PDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH---HHHHHHHHHHHC--TTSEEEEEECCTTSHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHH---HHHHHHHHHhhC--CCCeEEEEecCCCCHHHHH
Confidence            568999999999999999999999999   89999999998543   334444443210  2456888999999999999


Q ss_pred             HHHHHHHH--hcCCcc--EEEEcccccCC-CCCccc-CCHHHHHHHHHhhhHHHHHHHHHHHhccccC----CeEEEecC
Q 039897          115 RVVDEVVN--AYGKID--ILVNNAAVQYK-AGSVEE-IDEERLERVFRTNIFSHFFMTRHSLRHMNEG----SAIINTTS  184 (272)
Q Consensus       115 ~~~~~~~~--~~g~ld--~vI~~ag~~~~-~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----g~iv~vsS  184 (272)
                      ++++++.+  .+|++|  +||||||+... ..++.+ .+.++|++++++|+.++++++++++|.|++.    |+||++||
T Consensus        77 ~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS  156 (259)
T 1oaa_A           77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             HHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcC
Confidence            99999998  678899  99999998543 245777 7899999999999999999999999999653    78999999


Q ss_pred             CCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----CCHHHHHhhccCCCCCCCCCcc
Q 039897          185 VEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----FSEEESAQFGSEVPMKRAGQPI  246 (272)
Q Consensus       185 ~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  246 (272)
                      .++..+.+.              +++++.|+.+  |+||+|+||+++|++....    ..++....+....|.+++.+|+
T Consensus       157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~  234 (259)
T 1oaa_A          157 LCALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG  234 (259)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHH
T ss_pred             chhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHH
Confidence            988776554              6788888863  9999999999999985321    1222233344456778899999


Q ss_pred             chhhhhhhhhccCCCCcccceeeccC
Q 039897          247 EVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       247 dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+.++||+++  ..++||++|++|
T Consensus       235 dvA~~v~~l~~~--~~~itG~~i~vd  258 (259)
T 1oaa_A          235 TSAQKLLGLLQK--DTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHHHHHHHH--CCSCTTEEEETT
T ss_pred             HHHHHHHHHHhh--ccccCCcEEecc
Confidence            999999999984  579999999987

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3.4e-37  Score=260.39  Aligned_cols=227  Identities=30%  Similarity=0.362  Sum_probs=190.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|+++++++++++
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~   81 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAM---ATKAVEDLRM----EGHDVSSVVMDVTNTESVQNAV   81 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHh----cCCceEEEEecCCCHHHHHHHH
Confidence            45889999999999999999999999999999999998443   3333344433    3567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.....++.+.+.++|++.+++|+.+++++++++.|.|++  .++||++||..+..+.+.  
T Consensus        82 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  161 (260)
T 3awd_A           82 RSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQ  161 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCC
Confidence            9999999999999999998653467888999999999999999999999999999864  589999999876644321  


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCC-CCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIP-SSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|++++||+||+|+||++.|++.. ....++....+....|.+++.+|+|+|+++++|+++
T Consensus       162 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  241 (260)
T 3awd_A          162 QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASD  241 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCc
Confidence                          67888899889999999999999999864 222233334455567888899999999999999988


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..+++|++|++|
T Consensus       242 ~-~~~~~G~~~~v~  254 (260)
T 3awd_A          242 A-ASLMTGAIVNVD  254 (260)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             h-hccCCCcEEEEC
Confidence            7 789999999986

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.3e-37  Score=263.22  Aligned_cols=227  Identities=31%  Similarity=0.541  Sum_probs=189.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV-KSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..+|++|++|||||++|||++++++|+++|++|++++| +.   +.+.+..+++..    .+.++.++.+|+++++++++
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~   74 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE---DEANSVLEEIKK----VGGEAIAVKGDVTVESDVIN   74 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHHH----TTCEEEEEECCTTSHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCCh---HHHHHHHHHHHh----cCCceEEEECCCCCHHHHHH
Confidence            35689999999999999999999999999999999999 53   233333444433    35568889999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++++.|++   .++||++||..+..+.+
T Consensus        75 ~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  153 (261)
T 1gee_A           75 LVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP  153 (261)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC
Confidence            99999999999999999999854 467788999999999999999999999999999965   47999999987766544


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              ++.++.+++++||+||+|+||++.|++..... .++....+....|.+++.+|+|+|+++++|++
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  233 (261)
T 1gee_A          154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLAS  233 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            3              57888999999999999999999999853211 12223344456678889999999999999998


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. ..+++|++|++|
T Consensus       234 ~~-~~~~~G~~~~v~  247 (261)
T 1gee_A          234 SE-ASYVTGITLFAD  247 (261)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             cc-ccCCCCcEEEEc
Confidence            77 789999999886

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.7e-39  Score=283.95  Aligned_cols=230  Identities=17%  Similarity=0.198  Sum_probs=183.3

Q ss_pred             CCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHH---Hhhhc---CCCCceEEeccCCCh--
Q 039897           41 RGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR---EAKTS---DAKDPMAISADLGFD--  110 (272)
Q Consensus        41 ~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~D~~~~--  110 (272)
                      ++|++||||+++  |||+++|++|+++|++|+++++++.. .......+...   .....   ....+.++.+|+++.  
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   79 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY-NIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA   79 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHH-HHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccc-cccccchHHHHHHHHHHHhhcccccccccccccccccch
Confidence            479999999986  99999999999999999988876311 00000000000   00000   112356788888887  


Q ss_pred             H------------------HHHHHHHHHHHhcCCccEEEEccccc-CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHh
Q 039897          111 E------------------NCKRVVDEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLR  171 (272)
Q Consensus       111 ~------------------~~~~~~~~~~~~~g~ld~vI~~ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  171 (272)
                      +                  +++++++++.+.+|++|+||||||+. ....++.+.+.++|++++++|+.|+++++++++|
T Consensus        80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            7                  99999999999999999999999974 2357889999999999999999999999999999


Q ss_pred             ccccCCeEEEecCCCCccCChh---------------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCH--------
Q 039897          172 HMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSE--------  227 (272)
Q Consensus       172 ~~~~~g~iv~vsS~~~~~~~~~---------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~--------  227 (272)
                      +|+++|+||++||.++..+.+.               +++|+.|+++ +||+||+|+||+|+|+|.......        
T Consensus       160 ~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  239 (329)
T 3lt0_A          160 IMKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT  239 (329)
T ss_dssp             GEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC----------
T ss_pred             HHhhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccc
Confidence            9998899999999876654332               6899999998 899999999999999986443110        


Q ss_pred             ------------------------------------HHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          228 ------------------------------------EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       228 ------------------------------------~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                                                          +..+.+....|++++.+|+|+|++++||+++. +.++||++|.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~-a~~itG~~i~v  318 (329)
T 3lt0_A          240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRE-SRAITGQTIYV  318 (329)
T ss_dssp             --------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEE
T ss_pred             cccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCch-hccccCcEEEE
Confidence                                                01344556789999999999999999999988 89999999998


Q ss_pred             C
Q 039897          272 N  272 (272)
Q Consensus       272 d  272 (272)
                      |
T Consensus       319 d  319 (329)
T 3lt0_A          319 D  319 (329)
T ss_dssp             S
T ss_pred             c
Confidence            7

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.8e-38  Score=265.53  Aligned_cols=226  Identities=23%  Similarity=0.288  Sum_probs=176.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|++++++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDT---LRVVAQEAQS----LGGQCVPVVCDSSQESEVRSLFE   74 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----HSSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHH----cCCceEEEECCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999998443   3334444433    24568889999999999999999


Q ss_pred             HHHHh-cCCccEEEEccc--cc----CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc
Q 039897          119 EVVNA-YGKIDILVNNAA--VQ----YKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW  189 (272)
Q Consensus       119 ~~~~~-~g~ld~vI~~ag--~~----~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~  189 (272)
                      .+.+. +|++|+||||||  +.    ....++.+.+.++|+.++++|+.+++++++.+.|.|++  .|+||++||..+..
T Consensus        75 ~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  154 (260)
T 2qq5_A           75 QVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ  154 (260)
T ss_dssp             HHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS
T ss_pred             HHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC
Confidence            99886 899999999995  32    12357788899999999999999999999999999965  48999999987765


Q ss_pred             CChh-------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHH--Hh-hc-cCCCCCCCCCccchhhhh
Q 039897          190 HSPE-------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES--AQ-FG-SEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       190 ~~~~-------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~--~~-~~-~~~~~~~~~~~~dva~~~  252 (272)
                      +.+.             +++++.|++++||+||+|+||+|+|++.......+..  .. .. ...++++..+|+|+|+.+
T Consensus       155 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v  234 (260)
T 2qq5_A          155 YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCV  234 (260)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHH
Confidence            4322             6889999999999999999999999986543221111  11 11 123455667899999999


Q ss_pred             hhhhccCCC-CcccceeeccC
Q 039897          253 VFLACNHCS-SYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~-~~~tG~~i~id  272 (272)
                      +||+++. + .++||++|.+|
T Consensus       235 ~~l~s~~-~~~~itG~~i~~~  254 (260)
T 2qq5_A          235 VALATDP-NILSLSGKVLPSC  254 (260)
T ss_dssp             HHHHTCT-TGGGGTTCEEEHH
T ss_pred             HHHhcCc-ccccccceeechh
Confidence            9999987 5 48999999764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=3e-37  Score=259.34  Aligned_cols=225  Identities=32%  Similarity=0.472  Sum_probs=187.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.     ...++.++.+|+++++++++++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~   73 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDV---GEKAAKSVG-----TPDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHC-----CTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhh-----ccCceEEEECCCCCHHHHHHHH
Confidence            35889999999999999999999999999999999997433   333333321     2257889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC---CeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG---SAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---g~iv~vsS~~~~~~~~~-  193 (272)
                      +.+.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++.   ++||++||..+..+.+. 
T Consensus        74 ~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  152 (251)
T 1zk4_A           74 DATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL  152 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCC
Confidence            999999999999999999854 4678889999999999999999999999999999763   68999999887766543 


Q ss_pred             -------------HHHHHHHHh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 -------------ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 -------------~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                   +++++.|+.  +.||+||+|+||++.|++............+....|.+++.+|+|+|+.+++|+++
T Consensus       153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  232 (251)
T 1zk4_A          153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASN  232 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence                         567788887  88999999999999999864432222233345567888899999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..+++|+++++|
T Consensus       233 ~-~~~~~G~~~~v~  245 (251)
T 1zk4_A          233 E-SKFATGSEFVVD  245 (251)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             c-cccccCcEEEEC
Confidence            7 789999999986

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=7e-37  Score=262.28  Aligned_cols=226  Identities=29%  Similarity=0.404  Sum_probs=188.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++|++|||||++|||+++++.|+++|++|++++|+...   +.+..+++..    .+.++.++.+|++++++++++
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~d~~~v~~~  111 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKS---CDSVVDEIKS----FGYESSGYAGDVSKKEEISEV  111 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHH---HHHHHHHHHT----TTCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHH---HHHHHHHHHh----cCCceeEEECCCCCHHHHHHH
Confidence            356889999999999999999999999999999998887433   3333344432    356788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..+.+. 
T Consensus       112 ~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  190 (285)
T 2c07_A          112 INKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ  190 (285)
T ss_dssp             HHHHHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC
T ss_pred             HHHHHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCC
Confidence            9999999999999999999854 467888999999999999999999999999999864  479999999876655433 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.|+++.||+||+|+||++.|++... ..+.....+....|.+++.+|+|+|+++++|+++. 
T Consensus       191 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~-  268 (285)
T 2c07_A          191 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDK-  268 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG-
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCC-
Confidence                         678889999999999999999999998754 33444444555678888999999999999999987 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|++|++|
T Consensus       269 ~~~~~G~~i~v~  280 (285)
T 2c07_A          269 SGYINGRVFVID  280 (285)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cCCCCCCEEEeC
Confidence            789999999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.9e-37  Score=259.22  Aligned_cols=213  Identities=29%  Similarity=0.403  Sum_probs=181.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||++|||++++++|+++|++|++++|+.+.   +   .+++         .+.++.+|+++ ++++++++++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~---~~~~---------~~~~~~~D~~~-~~~~~~~~~~~   65 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---A---AQSL---------GAVPLPTDLEK-DDPKGLVKRAL   65 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---H---HHHH---------TCEEEECCTTT-SCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---H---HHhh---------CcEEEecCCch-HHHHHHHHHHH
Confidence            6899999999999999999999999999999998533   1   1111         16789999999 99999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC--hh----
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS--PE----  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~--~~----  193 (272)
                      +.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.  +.    
T Consensus        66 ~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  144 (239)
T 2ekp_A           66 EALGGLHVLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAY  144 (239)
T ss_dssp             HHHTSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccH
Confidence            99999999999999854 467888999999999999999999999999999965  4899999998877654  22    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                +++++.|++++||+||+|+||++.|++..... .++....+....|.+++.+|+|+|+.++||+++. +.
T Consensus       145 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~-~~  223 (239)
T 2ekp_A          145 TTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDE-AE  223 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG-GT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch-hc
Confidence                      68899999999999999999999999853211 1233344555678889999999999999999987 88


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      ++||++|.+|
T Consensus       224 ~~tG~~~~vd  233 (239)
T 2ekp_A          224 YLTGQAVAVD  233 (239)
T ss_dssp             TCCSCEEEES
T ss_pred             CCCCCEEEEC
Confidence            9999999987

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.1e-37  Score=257.93  Aligned_cols=199  Identities=24%  Similarity=0.366  Sum_probs=172.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++++|++|||||++|||++++++|+++|++|++++|+..                           +|+++++++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------------~D~~~~~~v~~~~   54 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------------LDISDEKSVYHYF   54 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------------CCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------------cCCCCHHHHHHHH
Confidence            4688999999999999999999999999999999988621                           8999999999988


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +++    +++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|+|+++|+||++||..+..+.+.    
T Consensus        55 ~~~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  130 (223)
T 3uce_A           55 ETI----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVK  130 (223)
T ss_dssp             HHH----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHh----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHH
Confidence            764    899999999998755678899999999999999999999999999999998899999999988776654    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHH---HHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE---ESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                +++++.|+++  |+||+|+||+++|++........   ..+.+....|.+++.+|+|+|++++||++.  
T Consensus       131 ~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~--  206 (223)
T 3uce_A          131 AAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN--  206 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC--
Confidence                      6788899877  99999999999999875543322   233456678999999999999999999984  


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                       .++||++|++|
T Consensus       207 -~~~tG~~i~vd  217 (223)
T 3uce_A          207 -SYMTGTVIDVD  217 (223)
T ss_dssp             -TTCCSCEEEES
T ss_pred             -CCCCCcEEEec
Confidence             59999999987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-38  Score=264.18  Aligned_cols=217  Identities=27%  Similarity=0.389  Sum_probs=178.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+....+.+.       +    . .++.++.+|++++++++   
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~----~-~~~~~~~~D~~~~~~~~---   66 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-------K----Y-PGIQTRVLDVTKKKQID---   66 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-------G----S-TTEEEEECCTTCHHHHH---
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------h----c-cCceEEEeeCCCHHHHH---
Confidence            3588999999999999999999999999999999999743322111       0    1 26788999999999887   


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh-h-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP-E-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~-~-  193 (272)
                       ++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+ . 
T Consensus        67 -~~~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  144 (246)
T 2ag5_A           67 -QFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNR  144 (246)
T ss_dssp             -HHHHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTB
T ss_pred             -HHHHHhCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCC
Confidence             44456789999999999854 467888999999999999999999999999999964  58999999988766544 2 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-----CHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-----SEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                   +++++.|++++||+||+|+||++.|++.....     ..+....+....|.+++.+|+|+|++++||
T Consensus       145 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l  224 (246)
T 2ag5_A          145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence                         68899999999999999999999998743211     122233344567888999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. +.++||++|.+|
T Consensus       225 ~s~~-~~~~tG~~i~vd  240 (246)
T 2ag5_A          225 ASDE-SAYVTGNPVIID  240 (246)
T ss_dssp             HSGG-GTTCCSCEEEEC
T ss_pred             hCcc-ccCCCCCEEEEC
Confidence            9987 889999999987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.6e-37  Score=260.74  Aligned_cols=230  Identities=28%  Similarity=0.409  Sum_probs=183.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhh---hcCCCCceEEeccCCChHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAK---TSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+....+.+   .+++....   .....++.++.+|+++++++
T Consensus         2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   78 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQET---VRLLGGPGSKEGPPRGNHAAFQADVSEARAA   78 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHTC------------CCEEEECCTTSHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHHHhcCccccccCcceEEEEecCCCHHHH
Confidence            3568899999999999999999999999999999999985443332   22222100   00115688999999999999


Q ss_pred             HHHHHHHHHhcCCc-cEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCcc
Q 039897          114 KRVVDEVVNAYGKI-DILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLW  189 (272)
Q Consensus       114 ~~~~~~~~~~~g~l-d~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~  189 (272)
                      +++++.+.+.++++ |+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|++   .++||++||..+..
T Consensus        79 ~~~~~~~~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  157 (264)
T 2pd6_A           79 RCLLEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV  157 (264)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH
T ss_pred             HHHHHHHHHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc
Confidence            99999999999998 99999999854 467788999999999999999999999999999865   47999999987665


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      +.+.              ++.++.+++++||+||+|+||++.|++.... ..+....+....|.+++.+|+|+|+++++|
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (264)
T 2pd6_A          158 GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV-PQKVVDKITEMIPMGHLGDPEDVADVVAFL  236 (264)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGCTTCSCBCHHHHHHHHHHH
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc-CHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            5443              6788889999999999999999999986432 223333444556778889999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. ..+++|+++++|
T Consensus       237 ~~~~-~~~~~G~~~~v~  252 (264)
T 2pd6_A          237 ASED-SGYITGTSVEVT  252 (264)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             cCCc-ccCCCCCEEEEC
Confidence            9887 789999999886

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-37  Score=259.34  Aligned_cols=226  Identities=25%  Similarity=0.370  Sum_probs=189.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.......   .+++.+.   .+.++.++.+|+++++++++++
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~l~~~---~~~~~~~~~~Dl~~~~~~~~~~   83 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEV---TEKVGKE---FGVKTKAYQCDVSNTDIVTKTI   83 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHH---HHHHHHH---HTCCEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHH---HHHHHHh---cCCeeEEEEeeCCCHHHHHHHH
Confidence            458899999999999999999999999999999999975443322   2333221   2557889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCCh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP--  192 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~--  192 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.+.|++   .++||++||..+..+.+  
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  162 (265)
T 1h5q_A           84 QQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS  162 (265)
T ss_dssp             HHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE
T ss_pred             HHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc
Confidence            999999999999999999854 467888999999999999999999999999999864   37899999987654321  


Q ss_pred             ---------h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          193 ---------E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       193 ---------~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                               .          +++++.|++++||+||+|+||++.|++.... .++....+....|.+++.+|+|+|++++
T Consensus       163 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (265)
T 1h5q_A          163 LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAI  241 (265)
T ss_dssp             TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred             ccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-chhHHHHHHhcCcccCCCCHHHHHHHHH
Confidence                     1          6788999999999999999999999986443 3344444555678888999999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      +|+++. ..+++|++|++|
T Consensus       242 ~l~~~~-~~~~~G~~~~v~  259 (265)
T 1h5q_A          242 LLLSDH-ATYMTGGEYFID  259 (265)
T ss_dssp             HHHSGG-GTTCCSCEEEEC
T ss_pred             hhccCc-hhcCcCcEEEec
Confidence            999987 789999999987

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=9.6e-37  Score=256.13  Aligned_cols=224  Identities=29%  Similarity=0.414  Sum_probs=186.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.   ...+.++.++.+|++++++++++++++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAET---LEETARTHW---HAYADKVLRVRADVADEGDVNAAIAAT   74 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHS---TTTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHH---HhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            36899999999999999999999999999999997443   333333331   112456888999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCC---cccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          121 VNAYGKIDILVNNAAVQYKAGS---VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      .+.++++|+||||||+.. ..+   +.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..+.+.  
T Consensus        75 ~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  153 (250)
T 2cfc_A           75 MEQFGAIDVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRS  153 (250)
T ss_dssp             HHHHSCCCEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCH
T ss_pred             HHHhCCCCEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCch
Confidence            999999999999999854 344   788899999999999999999999999999865  479999999887765543  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCC-CCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  +++++.|++++||+||+|+||++.|++... ...+.....+....|.+++.+|+|+|+++++|+++. 
T Consensus       154 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  232 (250)
T 2cfc_A          154 AYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGED-  232 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTT-
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch-
Confidence                        678889998999999999999999998643 112233344555678889999999999999999987 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|++|++|
T Consensus       233 ~~~~~G~~~~v~  244 (250)
T 2cfc_A          233 ATYVNGAALVMD  244 (250)
T ss_dssp             CTTCCSCEEEES
T ss_pred             hhcccCCEEEEC
Confidence            889999999887

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=5.4e-37  Score=258.59  Aligned_cols=226  Identities=34%  Similarity=0.516  Sum_probs=189.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-cchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK-SQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+ ....+.+   .+++..    .+.++.++.+|++++++++++
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~----~~~~~~~~~~D~~~~~~~~~~   75 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDET---IASMRA----DGGDAAFFAADLATSEACQQL   75 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHH---HHHHHH----TTCEEEEEECCTTSHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHH---HHHHHh----cCCceEEEECCCCCHHHHHHH
Confidence            46889999999999999999999999999999999998 4443333   333332    355788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-C------CeEEEecCCCCcc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-G------SAIINTTSVEPLW  189 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~------g~iv~vsS~~~~~  189 (272)
                      ++++.+.++++|+||||||......++.+.+.++|++++++|+.++++++++++|.|++ +      ++||++||..+..
T Consensus        76 ~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  155 (258)
T 3afn_B           76 VDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT  155 (258)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc
Confidence            99999999999999999997334567888999999999999999999999999999853 2      7999999987655


Q ss_pred             -CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          190 -HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       190 -~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                       +.+.              ++.++.+++++||+||+|+||++.|++.... .++....+....|.+++.+++|+|+++++
T Consensus       156 ~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (258)
T 3afn_B          156 GGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-TQDVRDRISNGIPMGRFGTAEEMAPAFLF  234 (258)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-CHHHHHHHHTTCTTCSCBCGGGTHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-CHHHHHHHhccCCCCcCCCHHHHHHHHHH
Confidence             3332              6788888988999999999999999986543 34444455566788889999999999999


Q ss_pred             hhccCCCC-cccceeeccC
Q 039897          255 LACNHCSS-YITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~-~~tG~~i~id  272 (272)
                      |+++. .. +++|+++++|
T Consensus       235 l~~~~-~~~~~~G~~~~v~  252 (258)
T 3afn_B          235 FASHL-ASGYITGQVLDIN  252 (258)
T ss_dssp             HHCHH-HHTTCCSEEEEES
T ss_pred             HhCcc-hhccccCCEEeEC
Confidence            99876 55 8999999986

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=9.7e-37  Score=256.72  Aligned_cols=225  Identities=29%  Similarity=0.506  Sum_probs=189.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||+||||++++++|+++|++|++++|+...   +.+..+++..    .+.++.++.+|+++++++++++
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   79 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA---ANHVVDEIQQ----LGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH---HHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHH----hCCceEEEEcCCCCHHHHHHHH
Confidence            45889999999999999999999999999999999998443   3333444433    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||.... .++ +.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+.  
T Consensus        80 ~~~~~~~~~~d~vi~~Ag~~~~-~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  157 (255)
T 1fmc_A           80 DFAISKLGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMT  157 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCC-CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCH
T ss_pred             HHHHHhcCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCc
Confidence            9999999999999999998543 445 6789999999999999999999999999865  479999999877665443  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  ++.++.+++++||++|+|+||++.|++......++....+....|.+++.+|+|+|+++++|+++. .
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~  236 (255)
T 1fmc_A          158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA-A  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGG-G
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCc-c
Confidence                        678888998899999999999999987654444444445555678888999999999999999877 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|++|++|
T Consensus       237 ~~~~G~~~~v~  247 (255)
T 1fmc_A          237 SWVSGQILTVS  247 (255)
T ss_dssp             TTCCSCEEEES
T ss_pred             ccCCCcEEEEC
Confidence            78999999886

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=7.2e-37  Score=277.48  Aligned_cols=223  Identities=28%  Similarity=0.399  Sum_probs=183.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.. .+.+.+..+++         ++.++.+|+++.++++++
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~---------~~~~~~~Dvtd~~~v~~~  277 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV---------GGTALTLDVTADDAVDKI  277 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH---------TCEEEECCTTSTTHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc---------CCeEEEEecCCHHHHHHH
Confidence            45589999999999999999999999999999999998643 22333322221         356899999999999999


Q ss_pred             HHHHHHhcCC-ccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGK-IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~-ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+.+++ +|+||||||+.. ..++.+.+.++|++++++|+.+++++++++.+.|++  .++||++||.++..+.++
T Consensus       278 ~~~~~~~~g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g  356 (454)
T 3u0b_A          278 TAHVTEHHGGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG  356 (454)
T ss_dssp             HHHHHHHSTTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHcCCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC
Confidence            9999999986 999999999965 478899999999999999999999999999999864  589999999887766554


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    +++++.|++++||+||+|+||+++|+|.... .....+......++++..+|+|+|+.+.||+++.
T Consensus       357 ~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~  435 (454)
T 3u0b_A          357 QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVGRRLNSLFQGGQPVDVAELIAYFASPA  435 (454)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHHHhhccccCCCCHHHHHHHHHHHhCCc
Confidence                          6889999999999999999999999997542 2222222333567788899999999999999988


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++||++|++|
T Consensus       436 -a~~itG~~i~vd  447 (454)
T 3u0b_A          436 -SNAVTGNTIRVC  447 (454)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -cCCCCCcEEEEC
Confidence             899999999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=5.2e-37  Score=257.37  Aligned_cols=227  Identities=35%  Similarity=0.477  Sum_probs=188.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.+|++|++|||||++|||++++++|+++|++|++++|+....+.+   .+++...   .+.++.++.+|++++++++++
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~---~~~~~~~~~~D~~~~~~~~~~   75 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAV---AEEIANK---YGVKAHGVEMNLLSEESINKA   75 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHHHHHH---HCCCEEEEECCTTCHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHHHhh---cCCceEEEEccCCCHHHHHHH
Confidence            4568999999999999999999999999999999999985443333   3333221   245688899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++.+++.|++  .++||++||..+..+.+. 
T Consensus        76 ~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  154 (248)
T 2pnf_A           76 FEEIYNLVDGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ  154 (248)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCC
Confidence            9999999999999999999854 467788899999999999999999999999999865  479999999866554332 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   ++.++.|+.++||++|+|+||++.|++... ........+....|.+++.+|+|+|+++++|+++. 
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  232 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSEL-  232 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG-
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCch-
Confidence                         678889999999999999999999998643 33333344445567788899999999999999876 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|+++++|
T Consensus       233 ~~~~~G~~~~v~  244 (248)
T 2pnf_A          233 ASYITGEVIHVN  244 (248)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hhcCCCcEEEeC
Confidence            779999999886

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.1e-37  Score=262.76  Aligned_cols=223  Identities=20%  Similarity=0.300  Sum_probs=171.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+ |++|||||++|||++++++|+++|++|++++|+..   .+.+..+++..     ..++.++.+|+++++++++++
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~---~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~   88 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREE---RLQALAGELSA-----KTRVLPLTLDVRDRAAMSAAV   88 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHTT-----TSCEEEEECCTTCHHHHHHHH
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHhhc-----CCcEEEEEcCCCCHHHHHHHH
Confidence            4566 99999999999999999999999999999999843   33333333321     256888999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CC-eEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GS-AIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g-~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+.++++|+||||||+.....++.+.+.++|++++++|+.+++++++.++|.|++  .| +||++||..+..+.+. 
T Consensus        89 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~  168 (272)
T 2nwq_A           89 DNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGS  168 (272)
T ss_dssp             HTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCC
Confidence            9999999999999999998543368889999999999999999999999999999965  46 9999999988766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   +++++.|++++||+||+|+||+++|++......... .............+|+|+|+.++||+++  
T Consensus       169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~pedvA~~v~~l~s~--  245 (272)
T 2nwq_A          169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ-ARYDKTYAGAHPIQPEDIAETIFWIMNQ--  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------CCCCBCHHHHHHHHHHHHTS--
T ss_pred             chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch-HHHHHhhccCCCCCHHHHHHHHHHHhCC--
Confidence                         677888888899999999999999998643221111 0111111122346899999999999986  


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..+++|+.|.+|
T Consensus       246 ~~~~~g~~i~v~  257 (272)
T 2nwq_A          246 PAHLNINSLEIM  257 (272)
T ss_dssp             CTTEEEEEEEEE
T ss_pred             CccCccceEEEe
Confidence            568999999775

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.3e-36  Score=257.48  Aligned_cols=220  Identities=26%  Similarity=0.391  Sum_probs=178.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|++|++|||||++|||++++++|+++|++|++++|+....+.+   .+++       +.++.++.+|+++++++++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~-------~~~~~~~~~D~~~~~~v~~~~   77 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ---AKKL-------GNNCVFAPADVTSEKDVQTAL   77 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH---HHHH-------CTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHH---HHHh-------CCceEEEEcCCCCHHHHHHHH
Confidence            468999999999999999999999999999999999986544333   2222       456889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcc------cCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeEEEec
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVE------EIDEERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAIINTT  183 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~iv~vs  183 (272)
                      +++.+.++++|+||||||+... .++.      +.+.++|++.+++|+.+++++++++.|.|++        .++||++|
T Consensus        78 ~~~~~~~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~is  156 (265)
T 2o23_A           78 ALAKGKFGRVDVAVNCAGIAVA-SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTA  156 (265)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC-CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEEC
T ss_pred             HHHHHHCCCCCEEEECCccCCC-CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeC
Confidence            9999999999999999998543 3333      4789999999999999999999999999865        37899999


Q ss_pred             CCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC-CCCCCccch
Q 039897          184 SVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEV  248 (272)
Q Consensus       184 S~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv  248 (272)
                      |..+..+.+.              +++++.|++++||+||+|+||+++|++.... .++....+....|. +++.+|+|+
T Consensus       157 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dv  235 (265)
T 2o23_A          157 SVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL-PEKVCNFLASQVPFPSRLGDPAEY  235 (265)
T ss_dssp             CTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSSSCSCBCHHHH
T ss_pred             ChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc-CHHHHHHHHHcCCCcCCCCCHHHH
Confidence            9876655443              6788999999999999999999999987432 22222333445676 788999999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+.+++|++   +.+++|++|.+|
T Consensus       236 a~~~~~l~~---~~~~~G~~i~vd  256 (265)
T 2o23_A          236 AHLVQAIIE---NPFLNGEVIRLD  256 (265)
T ss_dssp             HHHHHHHHH---CTTCCSCEEEES
T ss_pred             HHHHHHHhh---cCccCceEEEEC
Confidence            999999996   458999999987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=5.8e-37  Score=257.02  Aligned_cols=224  Identities=31%  Similarity=0.484  Sum_probs=170.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +|++|++|||||++|||++++++|+++|++|+++ .|+....   .+..+++..    .+.++.++.+|+++++++++++
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~---~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSL---DATAEEFKA----AGINVVVAKGDVKNPEDVENMV   74 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHH---HHHHHHHHH----TTCCEEEEESCTTSHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHH---HHHHHHHHh----cCCcEEEEECCCCCHHHHHHHH
Confidence            4789999999999999999999999999999999 4553333   333333333    4567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.|.|++  .++||++||..+..+.+.  
T Consensus        75 ~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  153 (247)
T 2hq1_A           75 KTAMDAFGRIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQA  153 (247)
T ss_dssp             HHHHHHHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CH
T ss_pred             HHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCc
Confidence            999999999999999999854 356777889999999999999999999999999864  479999999877665443  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++++.|++++||+||+|+||++.|++... ..+.....+....|.+++.+++|+|+++++|+++. .
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~  231 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD-S  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG-G
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcc-c
Confidence                        678899999999999999999999987533 23444444555678888999999999999999887 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .+++|++|++|
T Consensus       232 ~~~~G~~~~v~  242 (247)
T 2hq1_A          232 NYITGQVINID  242 (247)
T ss_dssp             TTCCSCEEEES
T ss_pred             ccccCcEEEeC
Confidence            78999999986

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-37  Score=259.71  Aligned_cols=228  Identities=30%  Similarity=0.487  Sum_probs=190.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.  .+.+.+..+++..    .+.++.++.+|++++++++++
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~--~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~   89 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS--SKAAEEVVAELKK----LGAQGVAIQADISKPSEVVAL   89 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc--hHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHH
Confidence            4568999999999999999999999999999999999832  2233333444433    456788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc-cCChh--
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL-WHSPE--  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~-~~~~~--  193 (272)
                      ++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++++.|+++++||++||..+. .+.+.  
T Consensus        90 ~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  168 (274)
T 1ja9_A           90 FDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHA  168 (274)
T ss_dssp             HHHHHHHHSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCH
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCc
Confidence            9999999999999999999854 4677889999999999999999999999999999866899999998776 44332  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCC-----------CCC-HHHHHhhccCCCCCCCCCccchh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-----------SFS-EEESAQFGSEVPMKRAGQPIEVA  249 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~dva  249 (272)
                                  ++.++.+++.+||++|+|+||++.|++...           ... .+....+....|.+++.+++|+|
T Consensus       169 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  248 (274)
T 1ja9_A          169 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG  248 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHH
Confidence                        678888998899999999999999987531           222 33344455667888899999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++++|+++. ..+++|+++++|
T Consensus       249 ~~i~~l~~~~-~~~~~G~~~~v~  270 (274)
T 1ja9_A          249 RAVSALCQEE-SEWINGQVIKLT  270 (274)
T ss_dssp             HHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHhCcc-cccccCcEEEec
Confidence            9999999887 778999999986

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.4e-37  Score=269.31  Aligned_cols=233  Identities=21%  Similarity=0.237  Sum_probs=160.8

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeccc--------chhhhHH-----------HHHHHHHHhhhcC
Q 039897           38 NKLRGKVALVTGG--DSGIGRAVAHCYALEGATVAFTYVKS--------QEEKDAQ-----------ETLEILREAKTSD   96 (272)
Q Consensus        38 ~~l~~k~vlVtGa--s~gIG~aia~~l~~~G~~v~i~~r~~--------~~~~~~~-----------~~~~~~~~~~~~~   96 (272)
                      ++|+||++|||||  ++|||+++|++|+++|++|++++|++        .+.+.+.           +..+++.+... .
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   83 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV-D   83 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc-c
Confidence            4588999999999  89999999999999999999998752        0111111           11112211000 0


Q ss_pred             CCCceEEecc------------CCC--------hHHHHHHHHHHHHhcCCccEEEEcccccC-CCCCcccCCHHHHHHHH
Q 039897           97 AKDPMAISAD------------LGF--------DENCKRVVDEVVNAYGKIDILVNNAAVQY-KAGSVEEIDEERLERVF  155 (272)
Q Consensus        97 ~~~~~~~~~D------------~~~--------~~~~~~~~~~~~~~~g~ld~vI~~ag~~~-~~~~~~~~~~~~~~~~~  155 (272)
                      .....++.+|            +++        +++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++++
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence            0012333333            333        45899999999999999999999999753 24678899999999999


Q ss_pred             HhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------------HHHHHHHHhh-CCeEEEEEecccccCC
Q 039897          156 RTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE-RGIRVNGVAPGPIWTP  219 (272)
Q Consensus       156 ~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------------~~~la~e~~~-~gi~vn~i~PG~v~t~  219 (272)
                      ++|+.++++++++++|+|+++|+||++||..+..+.+.               +++++.|+++ +||+||+|+||+|+|+
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~  243 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSR  243 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC--
T ss_pred             hHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccCh
Confidence            99999999999999999987899999999876543221               7899999986 8999999999999999


Q ss_pred             CCCCCCCH-------HHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          220 LIPSSFSE-------EESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       220 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.......       +..+.+....|.+++.+|+|+|+.++||+++. +.++||++|.+|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~-~~~itG~~i~vd  302 (319)
T 2ptg_A          244 AASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPL-ARAVTGATLYVD  302 (319)
T ss_dssp             -----------------------------CCCHHHHHHHHHHHTSGG-GTTCCSCEEEES
T ss_pred             hhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcc-cCCccCCEEEEC
Confidence            86432110       11112234568889999999999999999987 889999999987

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.5e-36  Score=252.98  Aligned_cols=213  Identities=22%  Similarity=0.276  Sum_probs=176.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++...   .+.++.++.+|++++++++++++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~   74 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDR---LEKIAHELMQE---QGVEVFYHHLDVSKAESVEEFSKKV   74 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHCC-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhh---cCCeEEEEEeccCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999998544   33434444321   3667899999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~------  193 (272)
                      .+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++ ++++|+++|..+..+.+.      
T Consensus        75 ~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  153 (235)
T 3l77_A           75 LERFGDVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVS  153 (235)
T ss_dssp             HHHHSSCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHH
T ss_pred             HHhcCCCCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHH
Confidence            999999999999999854 578899999999999999999999999999999954 688999999877766544      


Q ss_pred             --------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccc
Q 039897          194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT  265 (272)
Q Consensus       194 --------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~t  265 (272)
                              ++++  ++...||+||+|+||+++|++.......         .+..++.+|+|+|++++||++++ ..+++
T Consensus       154 sKaa~~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~p~dva~~v~~l~~~~-~~~~~  221 (235)
T 3l77_A          154 TKWAARALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPGK---------PKEKGYLKPDEIAEAVRCLLKLP-KDVRV  221 (235)
T ss_dssp             HHHHHHHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSCC---------CGGGTCBCHHHHHHHHHHHHTSC-TTCCC
T ss_pred             HHHHHHHHHHHH--hhcCCCeEEEEEeCCccccccccccCCc---------ccccCCCCHHHHHHHHHHHHcCC-CCCcc
Confidence                    3444  4456799999999999999997543321         11225678999999999999998 88999


Q ss_pred             ceeeccC
Q 039897          266 GQVLHPN  272 (272)
Q Consensus       266 G~~i~id  272 (272)
                      |+++..|
T Consensus       222 ~~~~~~~  228 (235)
T 3l77_A          222 EELMLRS  228 (235)
T ss_dssp             CEEEECC
T ss_pred             ceEEEee
Confidence            9998765

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=4e-36  Score=256.22  Aligned_cols=227  Identities=27%  Similarity=0.415  Sum_probs=186.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|++|++|||||++|||++++++|+++|++|++++|+...   ..+..+++.     ...++.++.+|++++++++++
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~   82 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDH---GQKVCNNIG-----SPDVISFVHCDVTKDEDVRNL   82 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHC-----CTTTEEEEECCTTCHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhH---HHHHHHHhC-----CCCceEEEECCCCCHHHHHHH
Confidence            356899999999999999999999999999999999987433   222233321     223788999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP-  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~-  192 (272)
                      ++++.+.++++|+||||||+... ..++.+.+.++|++.+++|+.+++++++++.|.|++  .++||++||..+..+.+ 
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  162 (278)
T 2bgk_A           83 VDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG  162 (278)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC
Confidence            99999999999999999998542 256788899999999999999999999999999965  57999999988776554 


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHHHHhhc--cCCCCCCCCCccchhhhhhh
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEESAQFG--SEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~dva~~~~~  254 (272)
                      .              ++.++.|++++||+|++|+||++.|++......  .+....+.  ...+.+++.+|+|+|+++++
T Consensus       163 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (278)
T 2bgk_A          163 VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY  242 (278)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHH
Confidence            2              678889998999999999999999998755332  22222221  12355778999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++. ..+++|++|++|
T Consensus       243 l~~~~-~~~~~G~~~~v~  259 (278)
T 2bgk_A          243 LAGDE-SKYVSGLNLVID  259 (278)
T ss_dssp             HHSGG-GTTCCSCEEEES
T ss_pred             HcCcc-cccCCCCEEEEC
Confidence            99887 789999999886

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=7.5e-37  Score=257.05  Aligned_cols=217  Identities=22%  Similarity=0.276  Sum_probs=169.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||++|||++++++|+++|++|++++|+...   +.+..+++       ..++.++.+|++++++++++++++.+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~   70 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER---LQELKDEL-------GDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHh-------cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999997433   33333322       24678899999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-------  193 (272)
                      .++++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||.++..+.+.       
T Consensus        71 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  150 (248)
T 3asu_A           71 EWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGAT  150 (248)
T ss_dssp             TTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHH
Confidence            99999999999998543467888999999999999999999999999999954  589999999988766543       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEeccccc-CCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccc
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIW-TPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT  265 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~t  265 (272)
                             +++++.|++++||+||+|+||+|+ |++........ ..............+|+|+|+.++||+++  ..+++
T Consensus       151 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~-~~~~~~~~~~~~~~~p~dvA~~v~~l~s~--~~~~~  227 (248)
T 3asu_A          151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-DGKAEKTYQNTVALTPEDVSEAVWWVSTL--PAHVN  227 (248)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------CCBCHHHHHHHHHHHHHS--CTTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCc-hHHHHHHHhccCCCCHHHHHHHHHHHhcC--Cccce
Confidence                   688999999999999999999999 99864221111 00111111122345899999999999986  46899


Q ss_pred             ceeeccC
Q 039897          266 GQVLHPN  272 (272)
Q Consensus       266 G~~i~id  272 (272)
                      |+.+.++
T Consensus       228 g~~i~v~  234 (248)
T 3asu_A          228 INTLEMM  234 (248)
T ss_dssp             CCEEEEC
T ss_pred             eeEEEEc
Confidence            9998764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3.3e-36  Score=259.81  Aligned_cols=229  Identities=24%  Similarity=0.351  Sum_probs=187.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.+.   .+.++.++.+|+++.+++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~~~   93 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDV---LKATAEQISSQ---TGNKVHAIQCDVRDPDMVQN   93 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH---HSSCEEEEECCTTCHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHHh---cCCceEEEEeCCCCHHHHHH
Confidence            3456899999999999999999999999999999999998543   33333444321   15578899999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc-c--CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN-E--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~--~g~iv~vsS~~~~~~~~  192 (272)
                      +++.+.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.+.|+ +  .++||++||..+..+.+
T Consensus        94 ~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  172 (302)
T 1w6u_A           94 TVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG  172 (302)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC
Confidence            99999999999999999999854 46788899999999999999999999999999986 2  47999999987665543


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCC-CCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTP-LIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      .              +++++.+++++||+||+|+||++.|+ +....... .....+....|.+++.+|+|+|+++++|+
T Consensus       173 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~  252 (302)
T 1w6u_A          173 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC  252 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHT
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHc
Confidence            3              67888999999999999999999998 43322222 12234455678888999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. ..+++|++|++|
T Consensus       253 ~~~-~~~~~G~~~~v~  267 (302)
T 1w6u_A          253 SDY-ASWINGAVIKFD  267 (302)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             CCc-ccccCCCEEEEC
Confidence            887 789999999886

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-36  Score=257.75  Aligned_cols=231  Identities=28%  Similarity=0.450  Sum_probs=188.2

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhh-cCCCCceEEeccCCChHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT-SDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +..+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++..... ..+.++.++.+|++++++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~   88 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLER---LKSAADELQANLPPTKQARVIPIQCNIRNEEEVN   88 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhhccccCCccEEEEecCCCCHHHHH
Confidence            4456899999999999999999999999999999999998443   4444444432110 12557889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc-cc-CCeEEEecCCCCccCCh
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM-NE-GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~-~g~iv~vsS~~~~~~~~  192 (272)
                      ++++.+.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++++.+ ++ .++||++||.. ..+.+
T Consensus        89 ~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~  166 (303)
T 1yxm_A           89 NLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFP  166 (303)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCC
Confidence            999999999999999999999753 4677889999999999999999999999999954 33 68999999987 54443


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC---HHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS---EEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .              ++.++.|+.++||+||+|+||++.|++......   .+.........|.+++.+|+|+|+++++|
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l  246 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFL  246 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHH
Confidence            3              688899999999999999999999995312211   22223344557888899999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. ..+++|++|++|
T Consensus       247 ~~~~-~~~~~G~~~~v~  262 (303)
T 1yxm_A          247 LSPA-ASFITGQSVDVD  262 (303)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             hCcc-cccCCCcEEEEC
Confidence            9887 789999999886

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=8.5e-37  Score=257.53  Aligned_cols=214  Identities=22%  Similarity=0.264  Sum_probs=177.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||++|||++++++|+++|++|++++|+....+.+.+    +..    .+.++..+     |+++++++++++.+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----l~~----~~~~~~~~-----d~~~v~~~~~~~~~   68 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA----FAE----TYPQLKPM-----SEQEPAELIEAVTS   68 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH----HHH----HCTTSEEC-----CCCSHHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHh----cCCcEEEE-----CHHHHHHHHHHHHH
Confidence            689999999999999999999999999999998655443322    322    23344443     67788999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-------  193 (272)
                      .++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+.       
T Consensus        69 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  148 (254)
T 1zmt_A           69 AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSA  148 (254)
T ss_dssp             HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHH
T ss_pred             HhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHH
Confidence            99999999999998624578889999999999999999999999999999965  489999999988776543       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccc---------cCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPI---------WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                             +++++.|++++||+||+|+||+|         +|++...  .++....+....|.+++.+|+|+|+.++||++
T Consensus       149 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s  226 (254)
T 1zmt_A          149 RAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT--NPEHVAHVKKVTALQRLGTQKELGELVAFLAS  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT--CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc--ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence                   68899999999999999999999         6765432  12333334455788899999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|.+|
T Consensus       227 ~~-~~~~tG~~~~vd  240 (254)
T 1zmt_A          227 GS-CDYLTGQVFWLA  240 (254)
T ss_dssp             TS-CGGGTTCEEEES
T ss_pred             cc-cCCccCCEEEEC
Confidence            87 889999999987

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.7e-36  Score=261.89  Aligned_cols=232  Identities=23%  Similarity=0.296  Sum_probs=173.4

Q ss_pred             cCCCCCCCCCCCCCCCCC---CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcC
Q 039897           20 EHVMEPTPQFTSHDYKPS---NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD   96 (272)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~---~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~   96 (272)
                      -|+|-++|...+++.+|.   .+++||++|||||++|||++++++|+++|++|++++|+..   .+.+..+++..    .
T Consensus         6 ~~~~~~~~~~~~~~~~m~~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~l~~----~   78 (301)
T 3tjr_A            6 HHHMGTLEAQTQGPGSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQP---ALEQAVNGLRG----Q   78 (301)
T ss_dssp             ------------------CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHH----T
T ss_pred             cccccchhhcccCCccchhHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHh----c
Confidence            456666666666666643   4589999999999999999999999999999999999844   44444444543    4


Q ss_pred             CCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-
Q 039897           97 AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-  175 (272)
Q Consensus        97 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-  175 (272)
                      +.++.++.+|+++.++++++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++ 
T Consensus        79 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~  157 (301)
T 3tjr_A           79 GFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ  157 (301)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence            678899999999999999999999999999999999999964 478889999999999999999999999999999965 


Q ss_pred             --CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC---------HHHH
Q 039897          176 --GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS---------EEES  230 (272)
Q Consensus       176 --~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~---------~~~~  230 (272)
                        .++||++||..+..+.+.              +++++.|++++||+||+|+||+|+|++......         ....
T Consensus       158 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  237 (301)
T 3tjr_A          158 GTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPE  237 (301)
T ss_dssp             CSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------
T ss_pred             CCCcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChh
Confidence              579999999988877664              688999999999999999999999998532100         0001


Q ss_pred             HhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          231 AQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       231 ~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      ..+..........+|+|+|+.++.++..+
T Consensus       238 ~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          238 GAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             -----------CCCHHHHHHHHHHHHHHT
T ss_pred             hhccccccccCCCCHHHHHHHHHHHHhcC
Confidence            11111222335679999999999998765

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.7e-37  Score=260.39  Aligned_cols=214  Identities=20%  Similarity=0.210  Sum_probs=174.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-e--cccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFT-Y--VKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|||||++|||++++++|+++|++|+++ +  |+..   .+.+..+++        .     ..|+.++++++++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~---~~~~~~~~~--------~-----~~~~~~~~~v~~~~~   64 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAA---ERQRFESEN--------P-----GTIALAEQKPERLVD   64 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH---HHHHHHHHS--------T-----TEEECCCCCGGGHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHH---HHHHHHHHh--------C-----CCcccCHHHHHHHHH
Confidence            5899999999999999999999999999999 5  8743   333222221        0     123347788889999


Q ss_pred             HHHHhcCCccEEEEcccccCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          119 EVVNAYGKIDILVNNAAVQYKA--GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++.+.++++|+||||||+....  .++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+. 
T Consensus        65 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  144 (244)
T 1zmo_A           65 ATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYN  144 (244)
T ss_dssp             HHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCc
Confidence            9999999999999999985431  67889999999999999999999999999999965  489999999887766543 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCC---CCCCCHHHHHhhcc-CCCCCCCCCccchhhhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLI---PSSFSEEESAQFGS-EVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~L~  256 (272)
                                   +++++.|++++||+||+|+||+++|++.   .....++....+.. ..|.+++.+|+|+|+.++||+
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~  224 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLA  224 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence                         7889999999999999999999999986   22110122223333 578889999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      ++. +.++||++|.+|
T Consensus       225 s~~-~~~~tG~~i~vd  239 (244)
T 1zmo_A          225 SRR-AAPIVGQFFAFT  239 (244)
T ss_dssp             TTT-TGGGTTCEEEES
T ss_pred             Ccc-ccCccCCEEEeC
Confidence            987 889999999987

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.3e-37  Score=268.91  Aligned_cols=232  Identities=23%  Similarity=0.238  Sum_probs=177.3

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecccchhh---hH-HHHHHHHHHhhhcCCC---CceEEec---
Q 039897           38 NKLRGKVALVTGG--DSGIGRAVAHCYALEGATVAFTYVKSQEEK---DA-QETLEILREAKTSDAK---DPMAISA---  105 (272)
Q Consensus        38 ~~l~~k~vlVtGa--s~gIG~aia~~l~~~G~~v~i~~r~~~~~~---~~-~~~~~~~~~~~~~~~~---~~~~~~~---  105 (272)
                      ++|+||++|||||  ++|||++++++|+++|++|++++|++....   .. ....+++.+..  .+.   .+.++.+   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~   82 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP--DGSLIEFAGVYPLDAA   82 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCT--TSCBCCCSCEEECCTT
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhh--cccccccccccccccc
Confidence            4589999999999  899999999999999999999987631000   00 00011111110  111   1234433   


Q ss_pred             ---------cCC--------ChHHHHHHHHHHHHhcCCccEEEEcccccC-CCCCcccCCHHHHHHHHHhhhHHHHHHHH
Q 039897          106 ---------DLG--------FDENCKRVVDEVVNAYGKIDILVNNAAVQY-KAGSVEEIDEERLERVFRTNIFSHFFMTR  167 (272)
Q Consensus       106 ---------D~~--------~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  167 (272)
                               |++        ++++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++++++|+.+++++++
T Consensus        83 ~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           83 FDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             CSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                     333        366899999999999999999999999753 24678889999999999999999999999


Q ss_pred             HHHhccccCCeEEEecCCCCccCChh---------------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCC---C--
Q 039897          168 HSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSF---S--  226 (272)
Q Consensus       168 ~~~~~~~~~g~iv~vsS~~~~~~~~~---------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~---~--  226 (272)
                      +++|+|+++|+||++||.++..+.+.               +++++.|+++ +||+||+|+||+|+|++.....   .  
T Consensus       163 ~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~  242 (315)
T 2o2s_A          163 HFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKS  242 (315)
T ss_dssp             HHSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSC
T ss_pred             HHHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccch
Confidence            99999988899999999876543221               7899999985 8999999999999998743211   0  


Q ss_pred             --HHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          227 --EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       227 --~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                        ++....+....|.+++.+|+|+|+.++||+++. +.++||++|.+|
T Consensus       243 ~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vd  289 (315)
T 2o2s_A          243 FIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPL-ARAVSGVTLYVD  289 (315)
T ss_dssp             HHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGG-GTTCCSCEEEES
T ss_pred             hHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCch-hccCcCCEEEEC
Confidence              111122334578899999999999999999987 889999999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.6e-36  Score=255.42  Aligned_cols=224  Identities=29%  Similarity=0.377  Sum_probs=184.7

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCc-eEEeccCCChHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP-MAISADLGFDENCK  114 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~  114 (272)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++       +.++ .++.+|++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~-------~~~~~~~~~~D~~~~~~~~   74 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAA---LDRAAQEL-------GAAVAARIVADVTDAEAMT   74 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHH-------GGGEEEEEECCTTCHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHh-------cccceeEEEEecCCHHHHH
Confidence            4466899999999999999999999999999999999998443   33333322       2345 78899999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~  192 (272)
                      ++++++.+ ++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.+
T Consensus        75 ~~~~~~~~-~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  152 (254)
T 2wsb_A           75 AAAAEAEA-VAPVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR  152 (254)
T ss_dssp             HHHHHHHH-HSCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS
T ss_pred             HHHHHHHh-hCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCC
Confidence            99999988 899999999999854 367788899999999999999999999999999865  58999999987654432


Q ss_pred             h----------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          193 E----------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       193 ~----------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      .                +++++.+++++||++|+|+||++.|++..... .++....+....|.+++.+|+|+|+++++|
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  232 (254)
T 2wsb_A          153 PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFL  232 (254)
T ss_dssp             SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            1                67888899889999999999999998753211 123334444567788899999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++. ..+++|+++++|
T Consensus       233 ~~~~-~~~~~G~~~~v~  248 (254)
T 2wsb_A          233 ASPA-ASYVTGAILAVD  248 (254)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             hCcc-cccccCCEEEEC
Confidence            9887 789999999886

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2.9e-36  Score=252.31  Aligned_cols=221  Identities=26%  Similarity=0.393  Sum_probs=184.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ||++|||||++|||++++++|+++|++|+++ +|+....   .+..+++..    .+.++.++.+|++++++++++++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~---~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   73 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAA---EEVSKQIEA----YGGQAITFGGDVSKEADVEAMMKTA   73 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH---HHHHHHHHH----HTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHHHh----cCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            6899999999999999999999999999995 6764333   333333332    2456888999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|++  .++||++||..+..+.+.     
T Consensus        74 ~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (244)
T 1edo_A           74 IDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYA  152 (244)
T ss_dssp             HHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HHHcCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccch
Confidence            999999999999999854 467788999999999999999999999999999864  579999999876655433     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh-ccCCCCc
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA-CNHCSSY  263 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~~~~~  263 (272)
                               ++.++.|+.++||+||+|+||++.|++.... .......+....|.+++.+|+|+|+++++|+ ++. ..+
T Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~-~~~  230 (244)
T 1edo_A          153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPA-ASY  230 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSG-GGG
T ss_pred             hhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc-ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCc-cCC
Confidence                     6788899999999999999999999976432 3333444556678888999999999999999 555 779


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      ++|++|++|
T Consensus       231 ~~G~~~~v~  239 (244)
T 1edo_A          231 ITGQAFTID  239 (244)
T ss_dssp             CCSCEEEES
T ss_pred             cCCCEEEeC
Confidence            999999987

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2e-36  Score=254.89  Aligned_cols=206  Identities=17%  Similarity=0.174  Sum_probs=175.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+..+|++|||||++|||++++++|+++|++|++++|+....                   ....+.+|++|.+++++++
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------------------~~~~~~~d~~d~~~v~~~~   78 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------------------ADHSFTIKDSGEEEIKSVI   78 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------------SSEEEECSCSSHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------------cccceEEEeCCHHHHHHHH
Confidence            456689999999999999999999999999999999985432                   1235789999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +++.+.++++|+||||||+......+.+.+.++|++.+++|+.++++++++++|.|+++|+||++||..+..+.+.    
T Consensus        79 ~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (251)
T 3orf_A           79 EKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAY  158 (251)
T ss_dssp             HHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHH
T ss_pred             HHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchh
Confidence            9999999999999999998655444778889999999999999999999999999988899999999988777654    


Q ss_pred             ----------HHHHHHHHh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc-CC
Q 039897          194 ----------ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN-HC  260 (272)
Q Consensus       194 ----------~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~-~~  260 (272)
                                +++++.|++  ++||+||+|+||+|+|++..         .+....+..++.+|+|+|+++++|+++ . 
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~---------~~~~~~~~~~~~~~~dva~~i~~l~~~~~-  228 (251)
T 3orf_A          159 GATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNR---------KYMSDANFDDWTPLSEVAEKLFEWSTNSD-  228 (251)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHH---------HHCTTSCGGGSBCHHHHHHHHHHHHHCGG-
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchh---------hhcccccccccCCHHHHHHHHHHHhcCcc-
Confidence                      577888876  78999999999999998742         223334667788999999999999998 6 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      ..++||++|+++
T Consensus       229 ~~~~tG~~i~v~  240 (251)
T 3orf_A          229 SRPTNGSLVKFE  240 (251)
T ss_dssp             GCCCTTCEEEEE
T ss_pred             ccCCcceEEEEe
Confidence            789999999864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=2.7e-36  Score=260.10  Aligned_cols=233  Identities=23%  Similarity=0.247  Sum_probs=177.3

Q ss_pred             CCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecccchhhh---H-HHHHHHHHHhhhcCCC--C-ceEEec--
Q 039897           37 SNKLRGKVALVTGGD--SGIGRAVAHCYALEGATVAFTYVKSQEEKD---A-QETLEILREAKTSDAK--D-PMAISA--  105 (272)
Q Consensus        37 ~~~l~~k~vlVtGas--~gIG~aia~~l~~~G~~v~i~~r~~~~~~~---~-~~~~~~~~~~~~~~~~--~-~~~~~~--  105 (272)
                      .++|++|++|||||+  +|||+++|++|+++|++|++++|+......   . ...++++.+..  .+.  . ...+.+  
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP--DGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCT--TSSBCCEEEEEEECT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhc--cccccccccccccce
Confidence            356899999999999  999999999999999999999875211000   0 00000110000  000  0 122333  


Q ss_pred             ------cCC----C--------hHHHHHHHHHHHHhcCCccEEEEcccccC-CCCCcccCCHHHHHHHHHhhhHHHHHHH
Q 039897          106 ------DLG----F--------DENCKRVVDEVVNAYGKIDILVNNAAVQY-KAGSVEEIDEERLERVFRTNIFSHFFMT  166 (272)
Q Consensus       106 ------D~~----~--------~~~~~~~~~~~~~~~g~ld~vI~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~  166 (272)
                            |++    +        +++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++++++|+.++++++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                  232    2        67899999999999999999999999743 2467888999999999999999999999


Q ss_pred             HHHHhccccCCeEEEecCCCCccCChh---------------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCC-CHHH
Q 039897          167 RHSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSF-SEEE  229 (272)
Q Consensus       167 ~~~~~~~~~~g~iv~vsS~~~~~~~~~---------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~-~~~~  229 (272)
                      ++++|+|+++|+||++||..+..+.+.               +++++.|+++ +||+||+|+||+|+|++..... .++.
T Consensus       161 ~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~  240 (297)
T 1d7o_A          161 SHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTM  240 (297)
T ss_dssp             HHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHH
T ss_pred             HHHHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHH
Confidence            999999987899999999866543221               6889999985 8999999999999999975421 1222


Q ss_pred             HHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          230 SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ...+....|.+++.+|+|+|+.++||+++. +.++||++|++|
T Consensus       241 ~~~~~~~~p~~r~~~pedvA~~v~~l~s~~-~~~itG~~i~vd  282 (297)
T 1d7o_A          241 IEYSYNNAPIQKTLTADEVGNAAAFLVSPL-ASAITGATIYVD  282 (297)
T ss_dssp             HHHHHHHSSSCCCBCHHHHHHHHHHHTSGG-GTTCCSCEEEES
T ss_pred             HHHhhccCCCCCCCCHHHHHHHHHHHhCcc-ccCCCCCEEEEC
Confidence            233344578889999999999999999987 889999999987

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=8.3e-36  Score=249.65  Aligned_cols=219  Identities=25%  Similarity=0.340  Sum_probs=179.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +++|++|++|||||++|||++++++|+++|++|++++|+...   +.+..++       . .+..++.+|++++++++++
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~-~~~~~~~~D~~~~~~~~~~   70 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD---LDSLVRE-------C-PGIEPVCVDLGDWEATERA   70 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHH-------S-TTCEEEECCTTCHHHHHHH
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------c-CCCCEEEEeCCCHHHHHHH
Confidence            457899999999999999999999999999999999997433   2222221       1 2456779999999998888


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++    .++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.+.|++   .++||++||..+..+.+.
T Consensus        71 ~~----~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  145 (244)
T 3d3w_A           71 LG----SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN  145 (244)
T ss_dssp             HT----TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT
T ss_pred             HH----HcCCCCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC
Confidence            76    5688999999999854 467788899999999999999999999999999864   479999999887766443


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    ++.++.|++++||+||+|+||++.|++..... .+.....+....|.+++.+|+|+|+++++|+++
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (244)
T 3d3w_A          146 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSD  225 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCc
Confidence                          67888999989999999999999999753211 122223444567888999999999999999987


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..+++|++|++|
T Consensus       226 ~-~~~~~G~~~~v~  238 (244)
T 3d3w_A          226 R-SGMTTGSTLPVE  238 (244)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             c-ccCCCCCEEEEC
Confidence            6 778999999986

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.5e-35  Score=248.09  Aligned_cols=221  Identities=33%  Similarity=0.454  Sum_probs=183.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceE-EeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMA-ISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~  119 (272)
                      +|++|||||++|||++++++|+++|++|+++ +|+...   +.+..+++..    .+.++.. +.+|+++.+++++++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~   73 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREK---AEEVAEEARR----RGSPLVAVLGANLLEAEAATALVHQ   73 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHH---HHHHHHHHHH----TTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHHHh----cCCceEEEEeccCCCHHHHHHHHHH
Confidence            4799999999999999999999999999998 776433   3333334433    3456677 89999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..+.+.    
T Consensus        74 ~~~~~~~~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  152 (245)
T 2ph3_A           74 AAEVLGGLDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANY  152 (245)
T ss_dssp             HHHHHTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHH
T ss_pred             HHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcch
Confidence            9999999999999999854 467788999999999999999999999999999965  479999999876554432    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                ++.++.|+.++||++|+|+||++.|++... ........+....|.+++.+++|+|+++++++++. ..+
T Consensus       153 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~  230 (245)
T 2ph3_A          153 VASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEK-AGY  230 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG-GTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-ccc
Confidence                      678889999899999999999999987643 23333444445667788899999999999999886 778


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      ++|+++++|
T Consensus       231 ~~G~~~~v~  239 (245)
T 2ph3_A          231 ITGQTLCVD  239 (245)
T ss_dssp             CCSCEEEES
T ss_pred             ccCCEEEEC
Confidence            999999886

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=2.4e-36  Score=252.78  Aligned_cols=206  Identities=17%  Similarity=0.188  Sum_probs=172.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ..++|++|||||++|||++++++|+++|++|++++|+.....                 ....++.+|++++++++++++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~D~~~~~~v~~~~~   66 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------SASVIVKMTDSFTEQADQVTA   66 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------SEEEECCCCSCHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------------CCcEEEEcCCCCHHHHHHHHH
Confidence            467899999999999999999999999999999999854321                 124678999999999999999


Q ss_pred             HHHHhc--CCccEEEEcccccCCCCCc-ccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--
Q 039897          119 EVVNAY--GKIDILVNNAAVQYKAGSV-EEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       119 ~~~~~~--g~ld~vI~~ag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--  193 (272)
                      ++.+.+  +++|+||||||+.. ..++ .+.+.++|++.+++|+.+++++++++.|.|+++|+||++||..+..+.+.  
T Consensus        67 ~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  145 (241)
T 1dhr_A           67 EVGKLLGDQKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMI  145 (241)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBH
T ss_pred             HHHHHhCCCCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCch
Confidence            999999  79999999999854 3566 77889999999999999999999999999987899999999988766554  


Q ss_pred             ------------HHHHHHHHh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ------------ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ------------~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                  +++++.|++  ++||+||+|+||+++|++.......         ....+..+++|+|+.+++|+++.
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~vA~~v~~l~~~~  216 (241)
T 1dhr_A          146 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE---------ADFSSWTPLEFLVETFHDWITGN  216 (241)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT---------SCGGGSEEHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc---------hhhccCCCHHHHHHHHHHHhcCC
Confidence                        677888888  8899999999999999874211110         11223457899999999999987


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       ..++||+.+.+|
T Consensus       217 -~~~~~G~~~~v~  228 (241)
T 1dhr_A          217 -KRPNSGSLIQVV  228 (241)
T ss_dssp             -TCCCTTCEEEEE
T ss_pred             -CcCccceEEEEe
Confidence             889999999875

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.5e-35  Score=246.22  Aligned_cols=207  Identities=16%  Similarity=0.220  Sum_probs=164.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||++|||++++++|+++|++|++++|+...   +.+..++       ...++.++.+|+++.++++++++++.+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~~~~   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESK---LSTVTNC-------LSNNVGYRARDLASHQEVEQLFEQLDS   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH---HHHHHHT-------CSSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHH-------HhhccCeEeecCCCHHHHHHHHHHHhh
Confidence            689999999999999999999999999999998433   3332222       356788999999999999999887643


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh--------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~--------  193 (272)
                         ..|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++ +++||++||..+..+.+.        
T Consensus        72 ---~~d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  147 (230)
T 3guy_A           72 ---IPSTVVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVK  147 (230)
T ss_dssp             ---CCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ---cCCEEEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHH
Confidence               3499999999854 578889999999999999999999999999999976 469999999988776654        


Q ss_pred             ------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccce
Q 039897          194 ------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQ  267 (272)
Q Consensus       194 ------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~  267 (272)
                            +++++.|++++||+||+|+||++.|++.....         ...+.+++.+|+|+|+.+++|++.+...++||+
T Consensus       148 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~  218 (230)
T 3guy_A          148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG---------KSLDTSSFMSAEDAALMIHGALANIGNGYVSDI  218 (230)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------CCCHHHHHHHHHHHCCEETTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC---------CCCCcccCCCHHHHHHHHHHHHhCcCCCCccce
Confidence                  68999999999999999999999999874421         223567888999999999999985548899999


Q ss_pred             eeccC
Q 039897          268 VLHPN  272 (272)
Q Consensus       268 ~i~id  272 (272)
                      .+..|
T Consensus       219 ~~~~~  223 (230)
T 3guy_A          219 TVNRE  223 (230)
T ss_dssp             EEEC-
T ss_pred             eecCC
Confidence            98754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-35  Score=248.40  Aligned_cols=212  Identities=30%  Similarity=0.414  Sum_probs=173.3

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..++++|++|||||++|||++++++|+++|++|++++|+.   +.    .+   +    . .++.++ +|+  .+++++
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---~~----~~---~----~-~~~~~~-~D~--~~~~~~   74 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---EL----LK---R----S-GHRYVV-CDL--RKDLDL   74 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HH----HH---H----T-CSEEEE-CCT--TTCHHH
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH---HH----HH---h----h-CCeEEE-eeH--HHHHHH
Confidence            34669999999999999999999999999999999999974   11    11   1    1 245667 999  556777


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      +++.+    .++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..+.+.
T Consensus        75 ~~~~~----~~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  149 (249)
T 1o5i_A           75 LFEKV----KEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN  149 (249)
T ss_dssp             HHHHS----CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHh----cCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC
Confidence            77654    38999999999854 467888999999999999999999999999999965  379999999987766543


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHH-hhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA-QFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++++.|++++||+||+|+||+++|++..... ++... .+....|.+++.+|+|+|++++||+++
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~  228 (249)
T 1o5i_A          150 LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSE  228 (249)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc-hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence                          68889999999999999999999999853221 22222 445567888999999999999999998


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.++||++|++|
T Consensus       229 ~-~~~~tG~~~~vd  241 (249)
T 1o5i_A          229 K-ASYLTGQTIVVD  241 (249)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             c-ccCCCCCEEEEC
Confidence            7 889999999987

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.6e-35  Score=275.76  Aligned_cols=210  Identities=26%  Similarity=0.411  Sum_probs=171.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|+.|+++|++|++++++.  .+   +..+++.+    .+.++..+.+|++  .+.++++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~---~~~~~i~~----~g~~~~~~~~Dv~--~~~~~~~  386 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--AT---KTVDEIKA----AGGEAWPDQHDVA--KDSEAII  386 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CH---HHHHHHHH----TTCEEEEECCCHH--HHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HH---HHHHHHHh----cCCeEEEEEcChH--HHHHHHH
Confidence            578999999999999999999999999999999998742  22   23334433    3456777888884  4567889


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+.. ..++.+.+.++|+++|++|+.|+++++++++|+|++  .|+||++||.++..+.++  
T Consensus       387 ~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~  465 (604)
T 2et6_A          387 KNVIDKYGTIDILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQA  465 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBH
T ss_pred             HHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCh
Confidence            999999999999999999854 468899999999999999999999999999999964  489999999887766554  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  +++|+.|++++||+||+|+||. .|+|.......+          .....+|+|+|+.++||+++. +
T Consensus       466 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~----------~~~~~~pe~vA~~v~~L~s~~-~  533 (604)
T 2et6_A          466 NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ----------DKNLYHADQVAPLLVYLGTDD-V  533 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------CCSSCGGGTHHHHHHTTSTT-C
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh----------hccCCCHHHHHHHHHHHhCCc-c
Confidence                        7899999999999999999995 999864322111          123458999999999999987 7


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      . +||++|.+|
T Consensus       534 ~-itG~~~~vd  543 (604)
T 2et6_A          534 P-VTGETFEIG  543 (604)
T ss_dssp             C-CCSCEEEEE
T ss_pred             C-CCCcEEEEC
Confidence            7 999999876

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-34  Score=241.54  Aligned_cols=213  Identities=24%  Similarity=0.334  Sum_probs=179.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ++|++|||||++|||++++++|+++|+       +|++++|+...   +.+..+++..    .+.++.++.+|+++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~---~~~~~~~~~~----~~~~~~~~~~D~~~~~~v   73 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD---LEKISLECRA----EGALTDTITADISDMADV   73 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH---HHHHHHHHHT----TTCEEEEEECCTTSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHH---HHHHHHHHHc----cCCeeeEEEecCCCHHHH
Confidence            378999999999999999999999999       99999997443   3333333332    355788999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS  191 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~  191 (272)
                      +++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++  .++||++||..+..+.
T Consensus        74 ~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (244)
T 2bd0_A           74 RRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF  152 (244)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC
Confidence            9999999999999999999999854 467888999999999999999999999999999854  5899999998877665


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      +.              +++++.|++++||+||+|+||++.|++........          ..++.+|+|+|+.++++++
T Consensus       153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~dva~~~~~l~~  222 (244)
T 2bd0_A          153 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM----------QALMMMPEDIAAPVVQAYL  222 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT----------GGGSBCHHHHHHHHHHHHT
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc----------cccCCCHHHHHHHHHHHHh
Confidence            43              57788999999999999999999999875432110          1256799999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. ..+++|+++..|
T Consensus       223 ~~-~~~~~g~~~~~~  236 (244)
T 2bd0_A          223 QP-SRTVVEEIILRP  236 (244)
T ss_dssp             SC-TTEEEEEEEEEE
T ss_pred             CC-ccccchheEEec
Confidence            88 889999988653

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-35  Score=245.81  Aligned_cols=219  Identities=24%  Similarity=0.337  Sum_probs=178.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|++|++|||||+||||++++++|+++|++|++++|+....   .+..++        ..++.++.+|++++++++++
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~--------~~~~~~~~~D~~~~~~~~~~   70 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL---VSLAKE--------CPGIEPVCVDLGDWDATEKA   70 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHH--------STTCEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH---HHHHHh--------ccCCCcEEecCCCHHHHHHH
Confidence            3568999999999999999999999999999999999974332   222211        12456779999999999888


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++    .++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.+.|++   .++||++||..+..+.+.
T Consensus        71 ~~----~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  145 (244)
T 1cyd_A           71 LG----GIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN  145 (244)
T ss_dssp             HT----TCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT
T ss_pred             HH----HcCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC
Confidence            76    5688999999999854 457788899999999999999999999999999854   479999999887766543


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-CCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    ++.++.+++++||++++|+||++.|++.... ..+.....+....|.+++.+++|+|+++++|+++
T Consensus       146 ~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  225 (244)
T 1cyd_A          146 LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSD  225 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCc
Confidence                          6788889988999999999999999875321 1233334444556778899999999999999988


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . ..+++|+++++|
T Consensus       226 ~-~~~~~G~~~~v~  238 (244)
T 1cyd_A          226 R-SASTSGGGILVD  238 (244)
T ss_dssp             G-GTTCCSSEEEES
T ss_pred             h-hhcccCCEEEEC
Confidence            7 789999999886

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-35  Score=247.96  Aligned_cols=205  Identities=13%  Similarity=0.181  Sum_probs=170.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|++|||||++|||++++++|+++|++|++++|+.....                 ....++.+|+++++++++++++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~   63 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------DSNILVDGNKNWTEQEQSILEQ   63 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------SEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------------cccEEEeCCCCCHHHHHHHHHH
Confidence            46899999999999999999999999999999999854421                 1246788999999999999999


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCc-ccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSV-EEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---  193 (272)
                      +.+.+  +++|+||||||+.. ..++ .+.+.++|++.+++|+.+++++++++.|.|+++++||++||..+..+.+.   
T Consensus        64 ~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  142 (236)
T 1ooe_A           64 TASSLQGSQVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIG  142 (236)
T ss_dssp             HHHHHTTCCEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHH
T ss_pred             HHHHhCCCCCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHH
Confidence            99998  79999999999854 3566 67889999999999999999999999999987899999999987766543   


Q ss_pred             -----------HHHHHHHHh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh-ccC
Q 039897          194 -----------ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA-CNH  259 (272)
Q Consensus       194 -----------~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~  259 (272)
                                 +++++.|++  ++||+||+|+||+++|++......         .....+..+|+|+|+.+++++ ++.
T Consensus       143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~~~dvA~~i~~~l~s~~  213 (236)
T 1ooe_A          143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP---------NADHSSWTPLSFISEHLLKWTTETS  213 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST---------TCCGGGCBCHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC---------CccccccCCHHHHHHHHHHHHcCCC
Confidence                       678888888  889999999999999987421110         011234467899999998444 776


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       ..++||+.|.+|
T Consensus       214 -~~~~~G~~~~v~  225 (236)
T 1ooe_A          214 -SRPSSGALLKIT  225 (236)
T ss_dssp             -GCCCTTCEEEEE
T ss_pred             -cccccccEEEEe
Confidence             889999999875

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=4.1e-35  Score=257.61  Aligned_cols=224  Identities=14%  Similarity=0.062  Sum_probs=178.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecccchhhhH---------HHHHHHHHHhhhcCCCCceEEeccCCC
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYAL-EGATVAFTYVKSQEEKDA---------QETLEILREAKTSDAKDPMAISADLGF  109 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~-~G~~v~i~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (272)
                      -.+|++|||||++|||+++++.|++ +|++|++++++....+..         ....+++.+    .+.++..+.+|+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~----~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ----KGLYAKSINGDAFS  120 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH----TTCCEEEEESCTTS
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh----cCCceEEEECCCCC
Confidence            4589999999999999999999999 999999999876543211         111122222    46678899999999


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEEcccccC------------CCCCc---------------------ccCCHHHHHHHHH
Q 039897          110 DENCKRVVDEVVNAYGKIDILVNNAAVQY------------KAGSV---------------------EEIDEERLERVFR  156 (272)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ld~vI~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~~  156 (272)
                      +++++++++++.+.+|++|+||||||+..            ..+++                     .+.+.++|+++++
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~  200 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVA  200 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHH
Confidence            99999999999999999999999999741            22454                     7789999999999


Q ss_pred             hhhHHHH-HHHHHHHh-ccc-cCCeEEEecCCCCccCChh----------------HHHHHHHHhhC-CeEEEEEecccc
Q 039897          157 TNIFSHF-FMTRHSLR-HMN-EGSAIINTTSVEPLWHSPE----------------ARGLALQLVER-GIRVNGVAPGPI  216 (272)
Q Consensus       157 ~N~~~~~-~l~~~~~~-~~~-~~g~iv~vsS~~~~~~~~~----------------~~~la~e~~~~-gi~vn~i~PG~v  216 (272)
                      +|..+.| .+++++.+ .|. ++|+||++||..+..+.+.                +++||.||+++ |||||+|+||++
T Consensus       201 Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i  280 (405)
T 3zu3_A          201 VMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAV  280 (405)
T ss_dssp             HHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCC
T ss_pred             hhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCC
Confidence            9999998 78888764 444 4689999999987655432                79999999999 999999999999


Q ss_pred             cCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          217 WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       217 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .|++.........+.... ..++++..+++|+++.+.||+++    +++|+.+.+|
T Consensus       281 ~T~~s~~ip~~p~y~~~l-~~~mkr~G~~Ed~a~~i~~L~sd----~l~~~~~~~D  331 (405)
T 3zu3_A          281 VSQASSAIPMMPLYLSLL-FKVMKEKGTHEGCIEQVYSLYKD----SLCGDSPHMD  331 (405)
T ss_dssp             CCHHHHTSTTHHHHHHHH-HHHHHHHTCCCCHHHHHHHHHHH----TTSSSCCCBC
T ss_pred             cCchhhcCCCCcHHHHHH-HHHHhcCCCcHHHHHHHHHHHhc----cccCCCCCcC
Confidence            999865433333222221 12688999999999999999986    4778777666

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.8e-34  Score=246.61  Aligned_cols=210  Identities=29%  Similarity=0.359  Sum_probs=172.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+++|++|||||++|||++++++|+++|++|++++|+....+.+.   ++       .+.++.++.+|+++.++++++++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~-------~~~~~~~~~~Dv~~~~~~~~~~~   71 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV---AA-------YPDRAEAISLDVTDGERIDVVAA   71 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH---HH-------CTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hh-------ccCCceEEEeeCCCHHHHHHHHH
Confidence            367899999999999999999999999999999999865443322   21       35678899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.|++++++.++|.|++  .++||++||..+..+.+.   
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  150 (281)
T 3m1a_A           72 DVLARYGRVDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSA  150 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchH
Confidence            99999999999999999854 467889999999999999999999999999999965  589999999988776554   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-------CH-----HHHHhhccCCCCCCCCCccchhh
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-------SE-----EESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-------~~-----~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                                 +++++.|++++||+||+|+||++.|++.....       ..     ..........+.+++.+++|+|+
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAA  230 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHH
Confidence                       68889999999999999999999999864321       10     11123344567788889999999


Q ss_pred             hhhhhhccC
Q 039897          251 CYVFLACNH  259 (272)
Q Consensus       251 ~~~~L~s~~  259 (272)
                      +++++++.+
T Consensus       231 a~~~~~~~~  239 (281)
T 3m1a_A          231 AIRLALDTE  239 (281)
T ss_dssp             HHHHHHHSS
T ss_pred             HHHHHHhCC
Confidence            999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.8e-35  Score=258.43  Aligned_cols=225  Identities=16%  Similarity=0.084  Sum_probs=176.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecccchhhhH---------HHHHHHHHHhhhcCCCCceEEeccCCCh
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYAL-EGATVAFTYVKSQEEKDA---------QETLEILREAKTSDAKDPMAISADLGFD  110 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~-~G~~v~i~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (272)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+....+..         ....+++.+    .+.++..+.+|++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~----~G~~a~~i~~Dvtd~  135 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA----AGLYSKSINGDAFSD  135 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----TTCCEEEEESCTTSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh----cCCcEEEEEecCCCH
Confidence            489999999999999999999999 999999999986544321         111123333    567788999999999


Q ss_pred             HHHHHHHHHHHHhc-CCccEEEEccccc------------CCCCCc---------------------ccCCHHHHHHHHH
Q 039897          111 ENCKRVVDEVVNAY-GKIDILVNNAAVQ------------YKAGSV---------------------EEIDEERLERVFR  156 (272)
Q Consensus       111 ~~~~~~~~~~~~~~-g~ld~vI~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~  156 (272)
                      ++++++++.+.+.+ |++|+||||||+.            ...+++                     .+.+.++|+.+++
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~  215 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTIT  215 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHH
Confidence            99999999999999 9999999999972            112344                     3679999999999


Q ss_pred             hhhHHHH-HHHHHHHh-cc-ccCCeEEEecCCCCccCChh----------------HHHHHHHHhhCCeEEEEEeccccc
Q 039897          157 TNIFSHF-FMTRHSLR-HM-NEGSAIINTTSVEPLWHSPE----------------ARGLALQLVERGIRVNGVAPGPIW  217 (272)
Q Consensus       157 ~N~~~~~-~l~~~~~~-~~-~~~g~iv~vsS~~~~~~~~~----------------~~~la~e~~~~gi~vn~i~PG~v~  217 (272)
                      +|..+.| .+++++.+ .| +++|+||++||.++..+.+.                +++||.|++++|||||+|+||+|.
T Consensus       216 Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~  295 (422)
T 3s8m_A          216 VMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVV  295 (422)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             hhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCc
Confidence            9999987 78888765 34 34689999999988765432                799999999999999999999999


Q ss_pred             CCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccc-ceeeccC
Q 039897          218 TPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT-GQVLHPN  272 (272)
Q Consensus       218 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~t-G~~i~id  272 (272)
                      |++............ ....|+++.++|+|+++.+.||+++. - |.+ |++..+|
T Consensus       296 T~~~~~ip~~~~~~~-~~~~~m~r~G~pEdva~~v~~L~sd~-l-y~~~~~~~~~d  348 (422)
T 3s8m_A          296 TQASAAIPVMPLYIS-MVYKIMKEKGLHEGTIEQLDRLFRER-L-YRQDGQPAEVD  348 (422)
T ss_dssp             CTTGGGSTHHHHHHH-HHHHHHHHTTCCCCHHHHHHHHHHHT-T-TCTTCCCCCCC
T ss_pred             ChhhhcCCCChHHHH-HHHhhhcCCcChHHHHHHHHHHhcch-h-hccCCCCcccC
Confidence            999754322222111 11237889999999999999999975 2 554 6654344

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.8e-35  Score=275.52  Aligned_cols=214  Identities=21%  Similarity=0.321  Sum_probs=173.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc------hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ------EEKDAQETLEILREAKTSDAKDPMAISADLGFDE  111 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (272)
                      .+|+||++|||||++|||+++|+.|+++|++|++++++..      +.+.+.+..+++..    .+.+   ..+|++|.+
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~----~g~~---~~~d~~d~~   76 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK----NGGV---AVADYNNVL   76 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHH----TTCE---EEEECCCTT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHh----cCCe---EEEEcCCHH
Confidence            3588999999999999999999999999999999988641      12344444555543    2322   236888888


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc
Q 039897          112 NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW  189 (272)
Q Consensus       112 ~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~  189 (272)
                      +++++++++.+.+|++|+||||||+.. ..++.+.+.++|+++|++|+.|+++++++++|+|++  .|+||++||.++..
T Consensus        77 ~~~~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~  155 (604)
T 2et6_A           77 DGDKIVETAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY  155 (604)
T ss_dssp             CHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            899999999999999999999999854 468889999999999999999999999999999965  48999999988776


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      +.++              +++|+.|++++||+||+|+|| +.|+|......++..          ...+|+|+|..++||
T Consensus       156 ~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~~~----------~~~~pe~vA~~v~~L  224 (604)
T 2et6_A          156 GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPPML----------EKLGPEKVAPLVLYL  224 (604)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHHHH----------TTCSHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChhhh----------ccCCHHHHHHHHHHH
Confidence            6554              799999999999999999998 688775332222111          124899999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++.  .++||++|.+|
T Consensus       225 ~s~~--~~itG~~~~vd  239 (604)
T 2et6_A          225 SSAE--NELTGQFFEVA  239 (604)
T ss_dssp             TSSS--CCCCSCEEEEE
T ss_pred             hCCc--ccCCCCEEEEC
Confidence            9875  78999999875

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.7e-35  Score=251.61  Aligned_cols=212  Identities=20%  Similarity=0.217  Sum_probs=164.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|+||++|||||++|||++++++|+++|++|++++|+....   .+..++       .+.++.++.+|+++.++++++
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~---~~~~~~-------~~~~~~~~~~Dl~d~~~v~~~   80 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG---EAAART-------MAGQVEVRELDLQDLSSVRRF   80 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHTT-------SSSEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHH-------hcCCeeEEEcCCCCHHHHHHH
Confidence            4679999999999999999999999999999999999984432   222221       255788999999999999998


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----  191 (272)
                      ++++    +++|+||||||+..   +..+.+.++|++++++|+.++++++++++|.|++  +||++||.++..+.     
T Consensus        81 ~~~~----~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--riv~isS~~~~~~~~~~~~  151 (291)
T 3rd5_A           81 ADGV----SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD--RVVTVSSMAHWPGRINLED  151 (291)
T ss_dssp             HHTC----CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE--EEEEECCGGGTTCCCCSSC
T ss_pred             HHhc----CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--heeEeechhhccCCCCccc
Confidence            8865    78999999999853   3356788899999999999999999999999986  99999998776542     


Q ss_pred             --------hh--------------HHHHHHHHhhCC--eEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCC-cc
Q 039897          192 --------PE--------------ARGLALQLVERG--IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQ-PI  246 (272)
Q Consensus       192 --------~~--------------~~~la~e~~~~g--i~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  246 (272)
                              +.              ++.++.|++++|  |+||+|+||+|+|++..... ... .......+.++... |+
T Consensus       152 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~-~~~-~~~~~~~~~~~~~~~~~  229 (291)
T 3rd5_A          152 LNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG-RKL-GDALMSAATRVVATDAD  229 (291)
T ss_dssp             TTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------CHHHH
T ss_pred             ccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc-hHH-HHHHHHHHHHHHhCCHH
Confidence                    11              688999999888  99999999999999975432 222 12223345556655 99


Q ss_pred             chhhhhhhhhccCCCCcccceeeccC
Q 039897          247 EVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       247 dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+.++||++++   +++|+.|.+|
T Consensus       230 ~~A~~~~~l~~~~---~~~G~~~~vd  252 (291)
T 3rd5_A          230 FGARQTLYAASQD---LPGDSFVGPR  252 (291)
T ss_dssp             HHHHHHHHHHHSC---CCTTCEEEET
T ss_pred             HHHHHHHHHHcCC---CCCCceeCCc
Confidence            9999999999974   8999999876

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3e-34  Score=243.30  Aligned_cols=222  Identities=15%  Similarity=0.173  Sum_probs=177.3

Q ss_pred             CCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceE
Q 039897           26 TPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEG---ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA  102 (272)
Q Consensus        26 ~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G---~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (272)
                      .+....++.+...++++|++|||||++|||++++++|+++|   ++|++++|+....+.+.    ++..    ...++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~----~l~~----~~~~~~~   76 (267)
T 1sny_A            5 HHHHHHSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE----DLAK----NHSNIHI   76 (267)
T ss_dssp             ---------------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH----HHHH----HCTTEEE
T ss_pred             ccchhhcccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH----Hhhc----cCCceEE
Confidence            34445556666788999999999999999999999999999   99999999866544332    2222    2457889


Q ss_pred             EeccCCChHHHHHHHHHHHHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----
Q 039897          103 ISADLGFDENCKRVVDEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----  175 (272)
Q Consensus       103 ~~~D~~~~~~~~~~~~~~~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----  175 (272)
                      +.+|+++.++++++++++.+.++  ++|+||||||+.....++.+.+.++|++.+++|+.+++++++++++.|++     
T Consensus        77 ~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~  156 (267)
T 1sny_A           77 LEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKAN  156 (267)
T ss_dssp             EECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhccccc
Confidence            99999999999999999999988  89999999998653567888999999999999999999999999999864     


Q ss_pred             --------CCeEEEecCCCCccCCh---h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHH
Q 039897          176 --------GSAIINTTSVEPLWHSP---E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES  230 (272)
Q Consensus       176 --------~g~iv~vsS~~~~~~~~---~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~  230 (272)
                              .++||++||..+..+.+   .              ++.++.+++++||+||+|+||+|+|++...       
T Consensus       157 ~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------  229 (267)
T 1sny_A          157 ESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------  229 (267)
T ss_dssp             TTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------
T ss_pred             ccccccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------
Confidence                    47899999987765431   1              678889999999999999999999998632       


Q ss_pred             HhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          231 AQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       231 ~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                               ....+|+++|+.++++++.. ...++|+.+.+|
T Consensus       230 ---------~~~~~~~~~a~~~~~~~~~~-~~~~~G~~~~~~  261 (267)
T 1sny_A          230 ---------SAPLDVPTSTGQIVQTISKL-GEKQNGGFVNYD  261 (267)
T ss_dssp             ---------TCSBCHHHHHHHHHHHHHHC-CGGGTTCEECTT
T ss_pred             ---------CCCCCHHHHHHHHHHHHHhc-CcCCCCcEEccC
Confidence                     13458999999999999887 788999999876

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.9e-34  Score=249.66  Aligned_cols=214  Identities=26%  Similarity=0.382  Sum_probs=173.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc------cchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK------SQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE  111 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (272)
                      ++|+||++|||||++|||++++++|+++|++|+++++.      .++.+.+.+..+++..    .+.   ...+|+++.+
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~----~~~---~~~~D~~~~~   77 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR----RGG---KAVANYDSVE   77 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH----TTC---EEEEECCCGG
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHh----hCC---eEEEeCCCHH
Confidence            46899999999999999999999999999999998763      1234445555555543    222   2358999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc
Q 039897          112 NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW  189 (272)
Q Consensus       112 ~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~  189 (272)
                      +++++++++.+.++++|+||||||+.. ..++.+.+.++|+..+++|+.|+++++++++|+|++  .++||++||.++..
T Consensus        78 ~~~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~  156 (319)
T 1gz6_A           78 AGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  156 (319)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc
Confidence            999999999999999999999999864 357888999999999999999999999999999965  48999999986655


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      +.+.              +++++.|++++||+||+|+||++ |++.......+..          ...+|+|+|..++||
T Consensus       157 ~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~~~----------~~~~p~dvA~~~~~l  225 (319)
T 1gz6_A          157 GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDLV----------EALKPEYVAPLVLWL  225 (319)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHHHH----------HHSCGGGTHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChhhh----------ccCCHHHHHHHHHHH
Confidence            4432              68899999999999999999998 8775432222111          134899999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +++.  .+++|++|.+|
T Consensus       226 ~s~~--~~~tG~~~~v~  240 (319)
T 1gz6_A          226 CHES--CEENGGLFEVG  240 (319)
T ss_dssp             TSTT--CCCCSCEEEEE
T ss_pred             hCch--hhcCCCEEEEC
Confidence            9864  47899999875

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-35  Score=248.40  Aligned_cols=217  Identities=29%  Similarity=0.426  Sum_probs=168.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.+..  .+.++.++.+|++|+++++++++
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~v~~~~~   78 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA---GVQCKAALHEQF--EPQKTLFIQCDVADQQQLRDTFR   78 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHTTTS--CGGGEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHhhc--CCCceEEEecCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997433   333333332110  13457889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCccCChh
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~~~~~  193 (272)
                      .+.+.++++|+||||||+..         .++|++.+++|+.+++.+++.++|.|++     .++||++||..+..+.+.
T Consensus        79 ~~~~~~g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  149 (267)
T 2gdz_A           79 KVVDHFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ  149 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHcCCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC
Confidence            99999999999999999842         2467899999999999999999999965     479999999987766543


Q ss_pred             --------------HHH--HHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHH-------hhccCCCCCCCCCccchhh
Q 039897          194 --------------ARG--LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESA-------QFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 --------------~~~--la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~dva~  250 (272)
                                    +++  ++.|++++||+||+|+||+++|++.......+...       ......+..++.+|+|+|+
T Consensus       150 ~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  229 (267)
T 2gdz_A          150 QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIAN  229 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHH
Confidence                          444  46788899999999999999998753321111111       0111112234569999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .++||+++.   +++|++|++|
T Consensus       230 ~v~~l~s~~---~~~G~~~~v~  248 (267)
T 2gdz_A          230 GLITLIEDD---ALNGAIMKIT  248 (267)
T ss_dssp             HHHHHHHCT---TCSSCEEEEE
T ss_pred             HHHHHhcCc---CCCCcEEEec
Confidence            999999875   5999999875

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=4.5e-34  Score=248.59  Aligned_cols=216  Identities=20%  Similarity=0.290  Sum_probs=167.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|+||||||++|||++++++|+++|++|++++|+....   .+..+++....  ...++.++.+|+++++++++++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~---~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~   78 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSI---DKALATLEAEG--SGPEVMGVQLDVASREGFKMAA   78 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHH---HHHHHHHHHHT--CGGGEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHH---HHHHHHHHhcC--CCCeEEEEECCCCCHHHHHHHH
Confidence            468999999999999999999999999999999999985444   44444443311  2237889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeEEEecCCCCcc
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAIINTTSVEPLW  189 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~iv~vsS~~~~~  189 (272)
                      +.+.+.++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++        .|+||++||.++..
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~  157 (319)
T 3ioy_A           79 DEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL  157 (319)
T ss_dssp             HHHHHHTCCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC
T ss_pred             HHHHHhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc
Confidence            999999999999999999854 478899999999999999999999999999999853        68999999998887


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHh---------hccCCCC-CCCCC
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQ---------FGSEVPM-KRAGQ  244 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~---------~~~~~~~-~~~~~  244 (272)
                      +.+.              +++++.|+.++||+|++|+||+|+|++....... .....         .....+. ....+
T Consensus       158 ~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (319)
T 3ioy_A          158 AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGME  237 (319)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCC
Confidence            7654              6788999999999999999999999987532111 10000         0000011 11268


Q ss_pred             ccchhhhhhhhhccC
Q 039897          245 PIEVAPCYVFLACNH  259 (272)
Q Consensus       245 ~~dva~~~~~L~s~~  259 (272)
                      |+|+|+.++..+...
T Consensus       238 pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          238 PDVIGARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcC
Confidence            999999999988765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-34  Score=245.80  Aligned_cols=224  Identities=21%  Similarity=0.281  Sum_probs=176.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++....  ...++.++.+|+++++++++++
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~  102 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGN---IEELAAECKSAG--YPGTLIPYRCDLSNEEDILSMF  102 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHTT--CSSEEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHH---HHHHHHHHHhcC--CCceEEEEEecCCCHHHHHHHH
Confidence            45899999999999999999999999999999999998543   333334443311  2245778999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC----CeEEEecCCCCc--cCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG----SAIINTTSVEPL--WHS  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----g~iv~vsS~~~~--~~~  191 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.+++.|++.    ++||++||..+.  .+.
T Consensus       103 ~~~~~~~g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (279)
T 1xg5_A          103 SAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL  181 (279)
T ss_dssp             HHHHHHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC
T ss_pred             HHHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC
Confidence            999999999999999999854 4677888999999999999999999999999999652    799999998776  333


Q ss_pred             hh--------------HHHHHHHHh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          192 PE--------------ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       192 ~~--------------~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      +.              ++.++.|++  +.||+||+|+||++.|++......... .......+..++.+|+|+|++++++
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dvA~~i~~l  260 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP-EKAAATYEQMKCLKPEDVAEAVIYV  260 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH-HHHHHHHC---CBCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh-hHHhhhcccccCCCHHHHHHHHHHH
Confidence            32              678888988  789999999999999997422111111 1111122345678999999999999


Q ss_pred             hccCCCCcccceee
Q 039897          256 ACNHCSSYITGQVL  269 (272)
Q Consensus       256 ~s~~~~~~~tG~~i  269 (272)
                      ++++ ..+.+|+++
T Consensus       261 ~~~~-~~~~~g~i~  273 (279)
T 1xg5_A          261 LSTP-AHIQIGDIQ  273 (279)
T ss_dssp             HHSC-TTEEEEEEE
T ss_pred             hcCC-cceEeeeEE
Confidence            9987 778888654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.5e-33  Score=234.52  Aligned_cols=207  Identities=24%  Similarity=0.288  Sum_probs=165.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..+|++|||||++|||++++++|+++|++|++++|+...   +.+..++       . .++.++.+|++++++++++++.
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~-~~~~~~~~D~~~~~~~~~~~~~   71 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKR---LQALAAE-------L-EGALPLPGDVREEGDWARAVAA   71 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHH-------S-TTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHH-------h-hhceEEEecCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999997433   2222221       1 2678899999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.+++.|++  .++||++||..+..+.+.    
T Consensus        72 ~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  150 (234)
T 2ehd_A           72 MEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAY  150 (234)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHH
T ss_pred             HHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchh
Confidence            9999999999999999854 467888999999999999999999999999999965  479999999987766443    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.|++++||++|+|+||+++|++.... . +   .+       ...+|+|+|+.++++++++ ..+
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~-~---~~-------~~~~~~dvA~~~~~l~~~~-~~~  217 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-P-G---QA-------WKLKPEDVAQAVLFALEMP-GHA  217 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------CCHHHHHHHHHHHHHSC-CSS
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-c-c---cc-------CCCCHHHHHHHHHHHhCCC-ccc
Confidence                      5788899999999999999999999986421 1 0   01       1468999999999999987 889


Q ss_pred             ccceeecc
Q 039897          264 ITGQVLHP  271 (272)
Q Consensus       264 ~tG~~i~i  271 (272)
                      ++|+++..
T Consensus       218 ~~g~~~~~  225 (234)
T 2ehd_A          218 MVSEIELR  225 (234)
T ss_dssp             CCCEEECC
T ss_pred             ccceEEEe
Confidence            99997643

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.5e-34  Score=269.94  Aligned_cols=220  Identities=21%  Similarity=0.314  Sum_probs=161.4

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc------chhhhHHHHHHHHHHhhhcCCCCceEEec
Q 039897           32 HDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS------QEEKDAQETLEILREAKTSDAKDPMAISA  105 (272)
Q Consensus        32 ~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (272)
                      ++.....+|+||++|||||++|||+++|++|+++|++|++++|..      .+.+.+....+++..    .+..   ..+
T Consensus         9 ~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~----~~~~---~~~   81 (613)
T 3oml_A            9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK----AGGE---AVA   81 (613)
T ss_dssp             ------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH----TTCC---EEE
T ss_pred             cCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH----hCCe---EEE
Confidence            344456789999999999999999999999999999999998821      123445555555544    2322   347


Q ss_pred             cCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEec
Q 039897          106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTT  183 (272)
Q Consensus       106 D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vs  183 (272)
                      |+++.++++++++++.+.+|++|+||||||+.. ..++.+.+.++|+.++++|+.|+++++++++|+|+++  |+||++|
T Consensus        82 D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~is  160 (613)
T 3oml_A           82 DYNSVIDGAKVIETAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTS  160 (613)
T ss_dssp             CCCCGGGHHHHHC----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             EeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence            999999999999999999999999999999964 4688899999999999999999999999999999763  7999999


Q ss_pred             CCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchh
Q 039897          184 SVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA  249 (272)
Q Consensus       184 S~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  249 (272)
                      |.++..+.+.              +++++.|++++||+||+|+||.+ |++.......+..          +..+|+|+|
T Consensus       161 S~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~~----------~~~~pedvA  229 (613)
T 3oml_A          161 SNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDILF----------NELKPKLIA  229 (613)
T ss_dssp             CHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHHH----------TTCCGGGTH
T ss_pred             CHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchhhh----------hcCCHHHHH
Confidence            9887766544              78999999999999999999975 6666554443322          224899999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +.++||+++.  +++||++|.+|
T Consensus       230 ~~v~~L~s~~--~~~tG~~i~vd  250 (613)
T 3oml_A          230 PVVAYLCHES--CEDNGSYIESA  250 (613)
T ss_dssp             HHHHHTTSTT--CCCCSCEEEEE
T ss_pred             HHHHHhcCCC--cCCCceEEEEC
Confidence            9999999875  68999999876

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-33  Score=236.33  Aligned_cols=206  Identities=18%  Similarity=0.196  Sum_probs=167.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      |++|++|||||++|||++++++|+++|  ++|++++|+....+.+.       +.   ...++.++.+|+++++++++++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-------~~---~~~~~~~~~~D~~~~~~~~~~~   70 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-------SI---KDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-------TC---CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-------hc---cCCceEEEEeecCCHHHHHHHH
Confidence            468999999999999999999999999  99999999865543221       11   2557889999999999999999


Q ss_pred             HHHHHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-------------CCeEEEe
Q 039897          118 DEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-------------GSAIINT  182 (272)
Q Consensus       118 ~~~~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-------------~g~iv~v  182 (272)
                      +++.+.++  ++|+||||||+.....++.+.+.++|++.+++|+.+++++++++++.|++             .++||++
T Consensus        71 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  150 (250)
T 1yo6_A           71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITI  150 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEE
T ss_pred             HHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEe
Confidence            99999998  99999999998653567888999999999999999999999999999853             5799999


Q ss_pred             cCCCCccCC-------hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCC
Q 039897          183 TSVEPLWHS-------PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKR  241 (272)
Q Consensus       183 sS~~~~~~~-------~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
                      ||..+..+.       +.              +++++.+++++||+||+|+||+++|++...                ..
T Consensus       151 sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------~~  214 (250)
T 1yo6_A          151 SSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------NA  214 (250)
T ss_dssp             CCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred             ccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------CC
Confidence            998776543       11              678889998899999999999999998632                13


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ..+|+|+|+.+++++++. ..+++|+.+.+|
T Consensus       215 ~~~~~~~a~~~~~~~~~~-~~~~~G~~~~~~  244 (250)
T 1yo6_A          215 ALTVEQSTAELISSFNKL-DNSHNGRFFMRN  244 (250)
T ss_dssp             ----HHHHHHHHHHHTTC-CGGGTTCEEETT
T ss_pred             CCCHHHHHHHHHHHHhcc-cccCCCeEEEEC
Confidence            468999999999999887 778999999876

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-33  Score=235.83  Aligned_cols=206  Identities=29%  Similarity=0.413  Sum_probs=172.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||++|||++++++|+++|++|++++|+.. .                  .++.++.+|++++++++++++++ 
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------------~~~~~~~~D~~~~~~~~~~~~~~-   61 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------------EDLIYVEGDVTREEDVRRAVARA-   61 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------------SSSEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------------cceEEEeCCCCCHHHHHHHHHHH-
Confidence            689999999999999999999999999999999743 1                  23478999999999999999999 


Q ss_pred             HhcCCccEEEEcccccCCCCCcccC----CHHHHHHHHHhhhHHHHHHHHHHHhccccCC--------eEEEecCCCCcc
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEI----DEERLERVFRTNIFSHFFMTRHSLRHMNEGS--------AIINTTSVEPLW  189 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g--------~iv~vsS~~~~~  189 (272)
                      +.++++|+||||||.... .++.+.    +.++|++.+++|+.+++++++++.+.|++.+        +||++||..+..
T Consensus        62 ~~~~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  140 (242)
T 1uay_A           62 QEEAPLFAVVSAAGVGLA-EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE  140 (242)
T ss_dssp             HHHSCEEEEEECCCCCCC-CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH
T ss_pred             HhhCCceEEEEcccccCc-ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence            888999999999998543 444443    4559999999999999999999999997633        999999987765


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC-CCCCCccchhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVAPCYVF  254 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  254 (272)
                      +.+.              ++.++.|++++||+||+|+||++.|++... ........+....|. +++.+|+|+|+++++
T Consensus       141 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  219 (242)
T 1uay_A          141 GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPFPPRLGRPEEYAALVLH  219 (242)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCSSCSCCCHHHHHHHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCCcccCCCHHHHHHHHHH
Confidence            5433              678889999999999999999999998643 234434455566777 889999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+++   .+++|++|++|
T Consensus       220 l~~~---~~~~G~~~~v~  234 (242)
T 1uay_A          220 ILEN---PMLNGEVVRLD  234 (242)
T ss_dssp             HHHC---TTCCSCEEEES
T ss_pred             HhcC---CCCCCcEEEEc
Confidence            9986   48999999886

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=6.8e-34  Score=239.59  Aligned_cols=211  Identities=18%  Similarity=0.211  Sum_probs=166.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh-HHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD-ENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~  116 (272)
                      +|++|++|||||++|||++++++|+++|++ |++++|+... +.+    +++.+..  .+.++.++.+|++++ ++++++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~----~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~   74 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TAL----AELKAIN--PKVNITFHTYDVTVPVAESKKL   74 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHH----HHHHHHC--TTSEEEEEECCTTSCHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHH----HHHHHhC--CCceEEEEEEecCCChHHHHHH
Confidence            578999999999999999999999999997 9999987532 222    2222211  245678899999998 999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCccCC
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHS  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~~~  191 (272)
                      ++++.+.++++|+||||||+.         +.++|++.+++|+.++++++++++|.|++     .++||++||.++..+.
T Consensus        75 ~~~~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  145 (254)
T 1sby_A           75 LKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI  145 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC
T ss_pred             HHHHHHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC
Confidence            999999999999999999983         24568999999999999999999999965     3789999999887665


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----HHHHHhhccCCCCCCCCCccchhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----EEESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                      +.              +++++.++.++||+||+|+||+++|++......    .+....+....|.   .+|+|+|+.++
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~dvA~~i~  222 (254)
T 1sby_A          146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPT---QTSEQCGQNFV  222 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCC---EEHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCC---CCHHHHHHHHH
Confidence            43              677888888889999999999999997533211    1111222222332   38999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++.    +.+|+++++|
T Consensus       223 ~~~~~----~~~G~~~~v~  237 (254)
T 1sby_A          223 KAIEA----NKNGAIWKLD  237 (254)
T ss_dssp             HHHHH----CCTTCEEEEE
T ss_pred             HHHHc----CCCCCEEEEe
Confidence            99863    5889999876

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-33  Score=244.33  Aligned_cols=178  Identities=24%  Similarity=0.352  Sum_probs=146.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc--chhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS--QEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +|++|++|||||++|||++++++|+++|++|++++|+.  ++.+.+.+..+.+..    .+.++.++.+|++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~----~~~~~~~~~~Dvtd~~~v~~~   77 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD----NDVDLRTLELDVQSQVSVDRA   77 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHH----HTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHh----cCCcEEEEEeecCCHHHHHHH
Confidence            47799999999999999999999999999999998863  223334443333333    456789999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCC-hh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHS-PE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~-~~  193 (272)
                      ++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+.... +.
T Consensus        78 ~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~  156 (324)
T 3u9l_A           78 IDQIIGEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPY  156 (324)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSS
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCc
Confidence            9999999999999999999854 578899999999999999999999999999999965  5899999998776332 21


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLI  221 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~  221 (272)
                                    +++++.|++++||+||+|+||++.|++.
T Consensus       157 ~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          157 LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence                          6889999999999999999999987653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-32  Score=234.05  Aligned_cols=203  Identities=22%  Similarity=0.314  Sum_probs=170.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+...   +.+..+++.+    .+.++.++.+|+++++++++++
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~~~~~v~~~~   99 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG---LEETAAKCKG----LGAKVHTFVVDCSNREDIYSSA   99 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHH---HHHHHHHHHh----cCCeEEEEEeeCCCHHHHHHHH
Confidence            56899999999999999999999999999999999998543   3333444433    3567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..+.+.  
T Consensus       100 ~~~~~~~g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  178 (272)
T 1yb1_A          100 KKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLL  178 (272)
T ss_dssp             HHHHHHTCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHH
T ss_pred             HHHHHHCCCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCch
Confidence            999999999999999999854 467788889999999999999999999999999865  479999999988776543  


Q ss_pred             ------------HHHHHHHHh---hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 ------------ARGLALQLV---ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 ------------~~~la~e~~---~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                  +++++.|+.   +.||+||+|+||+++|++....           ..+..++.+|+|+|+.+++++..
T Consensus       179 ~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~~~~~~~~~~dva~~i~~~~~~  247 (272)
T 1yb1_A          179 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----------STSLGPTLEPEEVVNRLMHGILT  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----------HHHHCCCCCHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-----------cccccCCCCHHHHHHHHHHHHHc
Confidence                        678888887   5699999999999999985321           01235677999999999999977


Q ss_pred             C
Q 039897          259 H  259 (272)
Q Consensus       259 ~  259 (272)
                      .
T Consensus       248 ~  248 (272)
T 1yb1_A          248 E  248 (272)
T ss_dssp             T
T ss_pred             C
Confidence            5

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.2e-33  Score=238.29  Aligned_cols=198  Identities=24%  Similarity=0.314  Sum_probs=151.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||++|||++++++|+++|++|++++|+....+                .   . +.+|+++.++++++++++  
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------------~---~-~~~Dl~~~~~v~~~~~~~--   59 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----------------A---D-LSTAEGRKQAIADVLAKC--   59 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------------C---C-TTSHHHHHHHHHHHHTTC--
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----------------c---c-cccCCCCHHHHHHHHHHh--
Confidence            68999999999999999999999999999999854321                0   1 678999999888887743  


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCc------------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPL------------  188 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~------------  188 (272)
                       .+++|+||||||+....        +.|++.+++|+.++++++++++|.|++.  ++||++||..+.            
T Consensus        60 -~~~id~lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  130 (257)
T 1fjh_A           60 -SKGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALA  130 (257)
T ss_dssp             -TTCCSEEEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHH
T ss_pred             -CCCCCEEEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhh
Confidence             38899999999985311        1289999999999999999999999764  899999998877            


Q ss_pred             ----------------cCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhcc--C
Q 039897          189 ----------------WHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS--E  236 (272)
Q Consensus       189 ----------------~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~--~  236 (272)
                                      .+.+.              ++.++.|++++||+||+|+||++.|++............+..  .
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  210 (257)
T 1fjh_A          131 LEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV  210 (257)
T ss_dssp             HHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CC
T ss_pred             hcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcc
Confidence                            23222              678889999999999999999999998754322222122222  4


Q ss_pred             CCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       237 ~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .|.+++.+|+|+|+++++|+++. ..++||++|.+|
T Consensus       211 ~~~~~~~~~~dvA~~~~~l~~~~-~~~~tG~~~~vd  245 (257)
T 1fjh_A          211 PPMGRRAEPSEMASVIAFLMSPA-ASYVHGAQIVID  245 (257)
T ss_dssp             CSTTSCCCTHHHHHHHHHHTSGG-GTTCCSCEEEES
T ss_pred             cccCCCCCHHHHHHHHHHHhCch-hcCCcCCEEEEC
Confidence            57788999999999999999987 789999999887

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.5e-34  Score=240.14  Aligned_cols=210  Identities=20%  Similarity=0.227  Sum_probs=143.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|++|++|||||++|||++++++|++ |++|++++|+....+   +..         ...++.++.+|+++..+ .+.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~---~~~---------~~~~~~~~~~D~~~~~~-~~~~~   67 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLA---ALA---------EIEGVEPIESDIVKEVL-EEGGV   67 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHH---HHH---------TSTTEEEEECCHHHHHH-TSSSC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHH---HHH---------hhcCCcceecccchHHH-HHHHH
Confidence            57899999999999999999999997 999999999743322   211         23457889999998776 44555


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~----  193 (272)
                      +..+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.+.    
T Consensus        68 ~~~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  146 (245)
T 3e9n_A           68 DKLKNLDHVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIY  146 (245)
T ss_dssp             GGGTTCSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHH
T ss_pred             HHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHH
Confidence            55567789999999999864 467888899999999999999999999999999965 689999999988877654    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                +++++.|++++||+||+|+||++.|++.......     .....+.+++.+|+|+|++++||++..    
T Consensus       147 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~p~dvA~~i~~l~~~~----  217 (245)
T 3e9n_A          147 AASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS-----QGTNFRPEIYIEPKEIANAIRFVIDAG----  217 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------CCGGGSCHHHHHHHHHHHHTSC----
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh-----hhcccccccCCCHHHHHHHHHHHHcCC----
Confidence                      6889999999999999999999999987543222     122345567889999999999999875    


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      -+|+++++|
T Consensus       218 ~~~~~~~i~  226 (245)
T 3e9n_A          218 ETTQITNVD  226 (245)
T ss_dssp             TTEEEEEEE
T ss_pred             CccceeeeE
Confidence            245665543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.9e-32  Score=232.56  Aligned_cols=206  Identities=26%  Similarity=0.296  Sum_probs=169.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYAL-EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~-~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .++|++|||||++|||++++++|++ +|++|++++|+...   ..+..+++..    .+.++.++.+|+++.++++++++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~---~~~~~~~l~~----~~~~~~~~~~Dl~~~~~~~~~~~   74 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR---GQAAVQQLQA----EGLSPRFHQLDIDDLQSIRALRD   74 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHH---HHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHH---HHHHHHHHHh----cCCeeEEEECCCCCHHHHHHHHH
Confidence            4689999999999999999999999 99999999998443   3444444443    35678899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCC-HHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-------
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEID-EERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-------  190 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-------  190 (272)
                      ++.+.++++|+||||||+... .. ...+ .++++..+++|+.+++++++++++.|++.++||++||..+..+       
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~-~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           75 FLRKEYGGLDVLVNNAGIAFK-VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             HHHHHHSSEEEEEECCCCCCC-TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHH
T ss_pred             HHHHhcCCCCEEEECCccccc-CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChh
Confidence            999999999999999998542 22 3334 5899999999999999999999999987889999999755421       


Q ss_pred             --------------------------------------Chh----------HHHHHHHHhh----CCeEEEEEecccccC
Q 039897          191 --------------------------------------SPE----------ARGLALQLVE----RGIRVNGVAPGPIWT  218 (272)
Q Consensus       191 --------------------------------------~~~----------~~~la~e~~~----~gi~vn~i~PG~v~t  218 (272)
                                                            ...          ++.++.++.+    .||+||+|+||+|.|
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t  232 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  232 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcccc
Confidence                                                  111          6788888887    799999999999999


Q ss_pred             CCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC-CCcccceeec
Q 039897          219 PLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC-SSYITGQVLH  270 (272)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~-~~~~tG~~i~  270 (272)
                      ++...                .+..+|+|+|+.+++|++.+. ..+++|+.|.
T Consensus       233 ~~~~~----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          233 DMAGP----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             TTTCT----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             CcCCc----------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            98632                235689999999999998542 3589999886

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2e-33  Score=245.22  Aligned_cols=225  Identities=22%  Similarity=0.298  Sum_probs=172.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|+||||||++|||++++++|+++|++|++++|+.++.+...+.++.+... ...+.++.++.+|++++++++++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-ACPPGSLETLQLDVRDSKSVAAARERV   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT-TCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc-cCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999998876665555544433211 112457889999999999999999988


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .  ++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+.     
T Consensus        80 ~--~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           80 T--EGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             T--TSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             h--cCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence            3  588999999999854 467888999999999999999999999999999964  589999999988766543     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHH----------HHHhhcc-----CCCCCCC-CCccch
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEE----------ESAQFGS-----EVPMKRA-GQPIEV  248 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~----------~~~~~~~-----~~~~~~~-~~~~dv  248 (272)
                               +++++.|++++||+||+|+||+|+|++........          ....+..     ..+.++. .+|+|+
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  236 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV  236 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHH
Confidence                     68889999999999999999999999975432210          0000000     0112333 489999


Q ss_pred             hhhhhhhhccC--CCCcccceee
Q 039897          249 APCYVFLACNH--CSSYITGQVL  269 (272)
Q Consensus       249 a~~~~~L~s~~--~~~~~tG~~i  269 (272)
                      |+.++++++..  ...+++|+.+
T Consensus       237 A~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          237 AEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHcCCCCCeEEEeCchH
Confidence            99999999753  2568899865

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-32  Score=233.63  Aligned_cols=207  Identities=23%  Similarity=0.216  Sum_probs=162.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh-HHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD-ENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~  116 (272)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+..   .+.+..+++.+.   .+.++.++.+|++++ ++++++
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~---~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~v~~~   81 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVT---KGHEAVEKLKNS---NHENVVFHQLDVTDPIATMSSL   81 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHTT---TCCSEEEEECCTTSCHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhc---CCCceEEEEccCCCcHHHHHHH
Confidence            4578999999999999999999999999999999999844   444445555432   345788999999998 999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCC-----------------------------CCCcccCCHHHHHHHHHhhhHHHHHHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYK-----------------------------AGSVEEIDEERLERVFRTNIFSHFFMTR  167 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~-----------------------------~~~~~~~~~~~~~~~~~~N~~~~~~l~~  167 (272)
                      ++.+.+.++++|+||||||+...                             ..++.+.+.++|++++++|+.|++++++
T Consensus        82 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  161 (311)
T 3o26_A           82 ADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTE  161 (311)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHH
Confidence            99999999999999999998531                             1245677899999999999999999999


Q ss_pred             HHHhcccc--CCeEEEecCCCCccCC----------------------------------------------h-h-----
Q 039897          168 HSLRHMNE--GSAIINTTSVEPLWHS----------------------------------------------P-E-----  193 (272)
Q Consensus       168 ~~~~~~~~--~g~iv~vsS~~~~~~~----------------------------------------------~-~-----  193 (272)
                      +++|+|++  .++||++||..+..+.                                              . +     
T Consensus       162 ~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          162 VLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             HhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            99999975  4799999998765431                                              1 1     


Q ss_pred             -----HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccccee
Q 039897          194 -----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV  268 (272)
Q Consensus       194 -----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~  268 (272)
                           +++++.++.  +|+||+|+||+|.|++.....                ..++++.++.+++++... ....+|..
T Consensus       242 a~~~~~~~la~e~~--~i~v~~v~PG~v~T~~~~~~~----------------~~~~~~~a~~~~~~~~~~-~~~~~g~~  302 (311)
T 3o26_A          242 CLNAYTRVLANKIP--KFQVNCVCPGLVKTEMNYGIG----------------NYTAEEGAEHVVRIALFP-DDGPSGFF  302 (311)
T ss_dssp             HHHHHHHHHHHHCT--TSEEEEECCCSBCSGGGTTCC----------------SBCHHHHHHHHHHHHTCC-SSCCCSCE
T ss_pred             HHHHHHHHHHhhcC--CceEEEecCCceecCCcCCCC----------------CCCHHHHHHHHHHHHhCC-CCCCCceE
Confidence                 567777775  499999999999999864321                136778888888877654 34445554


Q ss_pred             e
Q 039897          269 L  269 (272)
Q Consensus       269 i  269 (272)
                      +
T Consensus       303 ~  303 (311)
T 3o26_A          303 Y  303 (311)
T ss_dssp             E
T ss_pred             e
Confidence            4

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=3.2e-32  Score=242.93  Aligned_cols=225  Identities=13%  Similarity=0.045  Sum_probs=175.8

Q ss_pred             CCCcEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecccchhhh---------HHHHHHHHHHhhhcCCCCceEEeccCC
Q 039897           40 LRGKVALVTGGDSGIGRA--VAHCYALEGATVAFTYVKSQEEKD---------AQETLEILREAKTSDAKDPMAISADLG  108 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~a--ia~~l~~~G~~v~i~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (272)
                      ..||++|||||++|||++  +++.|+++|++|++++|+......         .....+.+.+    .+.++.++.+|++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~Dvt  133 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK----KGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH----TTCCEEEEESCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH----cCCcEEEEEeeCC
Confidence            679999999999999999  999999999999999997654321         1121222222    5667889999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEEcccccC------------CCCCc---------------------ccCCHHHHHHHH
Q 039897          109 FDENCKRVVDEVVNAYGKIDILVNNAAVQY------------KAGSV---------------------EEIDEERLERVF  155 (272)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~  155 (272)
                      ++++++++++++.+.+|++|+||||||...            ..+++                     .+.+.++|+.++
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~  213 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETR  213 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHH
Confidence            999999999999999999999999999741            12333                     467999999999


Q ss_pred             HhhhHHHH-HHHHHHHhc-c-ccCCeEEEecCCCCccCChh----------------HHHHHHHHhh-CCeEEEEEeccc
Q 039897          156 RTNIFSHF-FMTRHSLRH-M-NEGSAIINTTSVEPLWHSPE----------------ARGLALQLVE-RGIRVNGVAPGP  215 (272)
Q Consensus       156 ~~N~~~~~-~l~~~~~~~-~-~~~g~iv~vsS~~~~~~~~~----------------~~~la~e~~~-~gi~vn~i~PG~  215 (272)
                      ++|..+.+ .+++++.+. | .++|+||++||.++..+.+.                +++||.|+++ +|||||+|+||+
T Consensus       214 ~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~  293 (418)
T 4eue_A          214 KVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKA  293 (418)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             HHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCc
Confidence            99999988 777877654 3 34689999999987654432                7999999999 999999999999


Q ss_pred             ccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          216 IWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       216 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |.|++.........+.... ..++++..+++++++.+.||+++.   ..+|+.+.+|
T Consensus       294 v~T~~s~~ip~~p~y~~~~-~~~mk~~G~~E~v~e~~~~L~sd~---~~~g~~~~~D  346 (418)
T 4eue_A          294 LVTKASAYIPTFPLYAAIL-YKVMKEKNIHENCIMQIERMFSEK---IYSNEKIQFD  346 (418)
T ss_dssp             CCCHHHHTSTTHHHHHHHH-HHHHHHTTCCCCHHHHHHHHHHHT---TSSSSCCCCC
T ss_pred             CcChhhhcCCCCcHHHHHH-HHHHhhcCChHHHHHHHHHHhhcc---ccCCCccccC
Confidence            9999865433222221111 124667789999999999999975   6778887776

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.97  E-value=2.6e-30  Score=221.43  Aligned_cols=205  Identities=19%  Similarity=0.167  Sum_probs=164.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+++|++|||||++|||++++++|+++|++|++++|+....+   +..+++.+.   ...++.++.+|+++.+++++++
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~   97 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ---KVVSHCLEL---GAASAHYIAGTMEDMTFAEQFV   97 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHHHHHHH---TCSEEEEEECCTTCHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---HHHHHHHHh---CCCceEEEeCCCCCHHHHHHHH
Confidence            4588999999999999999999999999999999999854433   333333321   2346788999999999999999


Q ss_pred             HHHHHhcCCccEEEEc-ccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNN-AAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~-ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+.++++|+|||| +|+..  .++.+.+.++|++.+++|+.++++++++++|.|++ .++||++||.++..+.+.  
T Consensus        98 ~~~~~~~g~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  175 (286)
T 1xu9_A           98 AQAGKLMGGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVA  175 (286)
T ss_dssp             HHHHHHHTSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCH
T ss_pred             HHHHHHcCCCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCcc
Confidence            9999999999999999 56642  34556789999999999999999999999999864 689999999988766543  


Q ss_pred             ------------HHHHHHHH--hhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ------------ARGLALQL--VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ------------~~~la~e~--~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                  +++++.|+  ...||+|++|+||+++|++.......         .......+|+|+|+.++..+...
T Consensus       176 ~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~---------~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          176 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG---------IVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG---------GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc---------cccCCCCCHHHHHHHHHHHHhcC
Confidence                        67888888  56899999999999999874211110         01123468999999999887654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=9.6e-31  Score=212.71  Aligned_cols=184  Identities=18%  Similarity=0.203  Sum_probs=154.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      ++|||||+||||++++++|+ +|++|++++|+..                        .+.+|++++++++++++.+   
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------------~~~~D~~~~~~~~~~~~~~---   56 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------------DVTVDITNIDSIKKMYEQV---   56 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------------SEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------------ceeeecCCHHHHHHHHHHh---
Confidence            79999999999999999999 9999999998732                        4789999999999988765   


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  193 (272)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.+.|+++++||++||..+..+.+.          
T Consensus        57 -~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~  134 (202)
T 3d7l_A           57 -GKVDAIVSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGA  134 (202)
T ss_dssp             -CCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             -CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHH
Confidence             78999999999854 467888999999999999999999999999999987799999999877665443          


Q ss_pred             ----HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceee
Q 039897          194 ----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVL  269 (272)
Q Consensus       194 ----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i  269 (272)
                          ++.++.|+ ++||++|+|+||++.|++.          .+....+..++.+++|+|++++++++    .+++|++|
T Consensus       135 ~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~----------~~~~~~~~~~~~~~~dva~~~~~~~~----~~~~G~~~  199 (202)
T 3d7l_A          135 VTAFAKSAAIEM-PRGIRINTVSPNVLEESWD----------KLEPFFEGFLPVPAAKVARAFEKSVF----GAQTGESY  199 (202)
T ss_dssp             HHHHHHHHTTSC-STTCEEEEEEECCBGGGHH----------HHGGGSTTCCCBCHHHHHHHHHHHHH----SCCCSCEE
T ss_pred             HHHHHHHHHHHc-cCCeEEEEEecCccCCchh----------hhhhhccccCCCCHHHHHHHHHHhhh----ccccCceE
Confidence                34444455 5699999999999999863          11233455677899999999988873    26899999


Q ss_pred             ccC
Q 039897          270 HPN  272 (272)
Q Consensus       270 ~id  272 (272)
                      ++|
T Consensus       200 ~vd  202 (202)
T 3d7l_A          200 QVY  202 (202)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            987

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=2.2e-30  Score=261.00  Aligned_cols=226  Identities=17%  Similarity=0.203  Sum_probs=172.5

Q ss_pred             CCCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEe-cccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGDSG-IGRAVAHCYALEGATVAFTY-VKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~g-IG~aia~~l~~~G~~v~i~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ++|+||++|||||++| ||+++|+.|+++|++|++++ |+..   .+.+..+++.+.....+.++.++.+|+++.+++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~---~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~a  747 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSK---QVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA  747 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCH---HHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHH---HHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHH
Confidence            4689999999999998 99999999999999999995 5433   33333334422211135678899999999999999


Q ss_pred             HHHHHHHh-----cC-CccEEEEcccccCCCC-CcccCC--HHHHHHHHHhhhHHHHHHHHHH--HhccccC--CeEEEe
Q 039897          116 VVDEVVNA-----YG-KIDILVNNAAVQYKAG-SVEEID--EERLERVFRTNIFSHFFMTRHS--LRHMNEG--SAIINT  182 (272)
Q Consensus       116 ~~~~~~~~-----~g-~ld~vI~~ag~~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~--g~iv~v  182 (272)
                      +++.+.+.     +| ++|+||||||+.. .. ++.+.+  .++|+++|++|+.+++++++.+  .|.|+++  |+||++
T Consensus       748 lv~~i~~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnI  826 (1887)
T 2uv8_A          748 LIEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  826 (1887)
T ss_dssp             HHHHHHSCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEE
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEE
Confidence            99999988     66 8999999999854 35 788888  8999999999999999999988  6888663  799999


Q ss_pred             cCCCCccCChh-------------HHHHHHHHhhCCeEEEEEeccccc-CCCCCCCCCHHHHHhhccCCCCCCCCCccch
Q 039897          183 TSVEPLWHSPE-------------ARGLALQLVERGIRVNGVAPGPIW-TPLIPSSFSEEESAQFGSEVPMKRAGQPIEV  248 (272)
Q Consensus       183 sS~~~~~~~~~-------------~~~la~e~~~~gi~vn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  248 (272)
                      ||.++..+...             ++.++.+++++ |+||+|+||+|+ |+|......  .. ......+. +..+|+|+
T Consensus       827 SS~ag~~gg~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~--~~-~~~~~~pl-r~~sPEEV  901 (1887)
T 2uv8_A          827 SPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI--IA-EGIEKMGV-RTFSQKEM  901 (1887)
T ss_dssp             CSCTTCSSCBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCT--TH-HHHHTTSC-CCEEHHHH
T ss_pred             cChHhccCCCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchh--HH-HHHHhcCC-CCCCHHHH
Confidence            99987765221             35567777777 999999999999 787643111  11 11123344 55689999


Q ss_pred             hhhhhhhhccCCCCcccceeeccC
Q 039897          249 APCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       249 a~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |+.++||+++....++||+.|.+|
T Consensus       902 A~avlfLaSd~~as~iTGq~I~VD  925 (1887)
T 2uv8_A          902 AFNLLGLLTPEVVELCQKSPVMAD  925 (1887)
T ss_dssp             HHHHHGGGSHHHHHHHHHSCEEEE
T ss_pred             HHHHHHHhCCCccccccCcEEEEE
Confidence            999999998742368999998764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=4.8e-31  Score=258.45  Aligned_cols=227  Identities=18%  Similarity=0.209  Sum_probs=173.1

Q ss_pred             CCCCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGDSG-IGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~g-IG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .++|+||++|||||++| ||+++|++|+++|++|+++ +|+....+...   +++.+.....+.++.++.+|+++.++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a---~eL~ael~a~Ga~V~vV~~DVTD~esVe  547 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYY---QSIYAKYGAKGSTLIVVPFNQGSKQDVE  547 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHH---HHTTTTTCCTTCEEEEEECCSSSTTHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHH---HHHHHHhhcCCCeEEEEEeCCCCHHHHH
Confidence            35689999999999998 9999999999999999998 45543333332   2221111112456888999999999999


Q ss_pred             HHHHHHHHh-----cC-CccEEEEcccccCCCC-CcccCC--HHHHHHHHHhhhHHHHHHHHHH--HhccccC--CeEEE
Q 039897          115 RVVDEVVNA-----YG-KIDILVNNAAVQYKAG-SVEEID--EERLERVFRTNIFSHFFMTRHS--LRHMNEG--SAIIN  181 (272)
Q Consensus       115 ~~~~~~~~~-----~g-~ld~vI~~ag~~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~--g~iv~  181 (272)
                      ++++.+.+.     +| ++|+||||||+.. .. ++.+.+  .++|+++|++|+.+++++++.+  .|.|+++  |+||+
T Consensus       548 aLVe~I~e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVn  626 (1688)
T 2pff_A          548 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP  626 (1688)
T ss_dssp             HHHHHHHSCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCC
T ss_pred             HHHHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEE
Confidence            999999988     77 8999999999854 35 778888  9999999999999999999998  7888764  79999


Q ss_pred             ecCCCCccCChh-------------HHHHHHHHhhCCeEEEEEeccccc-CCCCCCCCCHHHHHhhccCCCCCCCCCccc
Q 039897          182 TTSVEPLWHSPE-------------ARGLALQLVERGIRVNGVAPGPIW-TPLIPSSFSEEESAQFGSEVPMKRAGQPIE  247 (272)
Q Consensus       182 vsS~~~~~~~~~-------------~~~la~e~~~~gi~vn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  247 (272)
                      +||.++..+...             .+.++.++++. |+||+|+||+|+ |+|....   +.........+. +..+|+|
T Consensus       627 ISSiAG~~Gg~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~---e~~~~~l~~ipl-R~~sPEE  701 (1688)
T 2pff_A          627 MSPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---NIIAEGIEKMGV-RTFSQKE  701 (1688)
T ss_dssp             CCSCTTTSSCBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT---TTCSTTTSSSSC-CCCCCCT
T ss_pred             EEChHhccCCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc---hHHHHHHHhCCC-CCCCHHH
Confidence            999987765222             12234455555 999999999999 7875431   111112233444 5569999


Q ss_pred             hhhhhhhhhccCCCCcccceeeccC
Q 039897          248 VAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       248 va~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +|+.++||+++....++||+.|.+|
T Consensus       702 VA~aIlFLaSd~sAs~ITGq~I~VD  726 (1688)
T 2pff_A          702 MAFNLLGLLTPEVVELCQKSPVMAD  726 (1688)
T ss_dssp             THHHHHHHTSTTHHHHHTTSCCCCC
T ss_pred             HHHHHHHHhCCCccccccCcEEEEE
Confidence            9999999998752468999999775

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=1.1e-29  Score=255.54  Aligned_cols=227  Identities=17%  Similarity=0.195  Sum_probs=174.0

Q ss_pred             CCCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSG-IGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~g-IG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ++|+||++|||||++| ||+++|++|+++|++|++++++..  +.+.+..+++.+.....+.++.++.+|+++.++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~--~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFS--RQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCh--HHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            4689999999999999 999999999999999999964422  2233333333221111356788999999999999999


Q ss_pred             HHHHHHh---cC-CccEEEEcccccCCCCCcccCC--HHHHHHHHHhhhHHHHHHHHH--HHhccccC--CeEEEecCCC
Q 039897          117 VDEVVNA---YG-KIDILVNNAAVQYKAGSVEEID--EERLERVFRTNIFSHFFMTRH--SLRHMNEG--SAIINTTSVE  186 (272)
Q Consensus       117 ~~~~~~~---~g-~ld~vI~~ag~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~--~~~~~~~~--g~iv~vsS~~  186 (272)
                      ++.+.+.   +| ++|+||||||+.....++.+.+  .++|+++|++|+.+++++++.  +++.|++.  |+||++||.+
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            9999998   88 9999999999854322788888  899999999999999999987  67888653  7999999998


Q ss_pred             CccCChh------------HHHH-HHHHhhCCeEEEEEeccccc-CCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhh
Q 039897          187 PLWHSPE------------ARGL-ALQLVERGIRVNGVAPGPIW-TPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       187 ~~~~~~~------------~~~l-a~e~~~~gi~vn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                      +..+...            ++.+ +.+++++ |+||+|+||+++ |+|...   .+.........+. +..+|+|+|+.+
T Consensus       806 g~~gg~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~---~~~~~~~~~~~pl-r~~sPeEVA~av  880 (1878)
T 2uv9_A          806 GTFGNDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA---NNLVAEGVEKLGV-RTFSQQEMAFNL  880 (1878)
T ss_dssp             SSSSCCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH---HHHTHHHHHTTTC-CCBCHHHHHHHH
T ss_pred             hccCCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc---chhhHHHHHhcCC-CCCCHHHHHHHH
Confidence            8765322            2333 3446666 999999999999 998632   1111122233444 455999999999


Q ss_pred             hhhhccCCC-CcccceeeccC
Q 039897          253 VFLACNHCS-SYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~-~~~tG~~i~id  272 (272)
                      +||+++. . .++||++|.+|
T Consensus       881 lfLaSd~-a~s~iTGq~I~VD  900 (1878)
T 2uv9_A          881 LGLMAPA-IVNLCQSDPVFAD  900 (1878)
T ss_dssp             HHHHSHH-HHHHHTTSCEEEE
T ss_pred             HHHhCCc-ccccccCcEEEEE
Confidence            9999886 5 78999998764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=4.4e-29  Score=230.10  Aligned_cols=209  Identities=16%  Similarity=0.150  Sum_probs=167.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEE-ecccch----------hhhHHHHHHHHHHhhhcCCCCceEEeccC
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFT-YVKSQE----------EKDAQETLEILREAKTSDAKDPMAISADL  107 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~-~r~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (272)
                      -.++++|||||++|||.+++++|+++|++ |+++ +|+..+          .+.+.+..+++..    .+.++.++.||+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~v~~~~~Dv  324 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD----LGATATVVTCDL  324 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH----HTCEEEEEECCT
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh----cCCEEEEEECCC
Confidence            35899999999999999999999999998 6777 887533          3344455555544    466789999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecC
Q 039897          108 GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTS  184 (272)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS  184 (272)
                      +|.++++++++++. .++++|+||||||+.. ..++.+.+.++|+++|++|+.|++++.+.+.+.|++   .++||++||
T Consensus       325 td~~~v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS  402 (525)
T 3qp9_A          325 TDAEAAARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS  402 (525)
T ss_dssp             TSHHHHHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred             CCHHHHHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence            99999999999998 7899999999999965 478899999999999999999999999999999965   478999999


Q ss_pred             CCCccCChh----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          185 VEPLWHSPE----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       185 ~~~~~~~~~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      .++..+.++          ...++.+++.+||++++|+||+++|+|....   .....+..  ......+|+++++.+.+
T Consensus       403 ~a~~~g~~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~---~~~~~~~~--~g~~~l~pee~a~~l~~  477 (525)
T 3qp9_A          403 VAAIWGGAGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEG---ATGERLRR--LGLRPLAPATALTALDT  477 (525)
T ss_dssp             GGGTTCCTTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSS---HHHHHHHH--TTBCCBCHHHHHHHHHH
T ss_pred             HHHcCCCCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccch---hhHHHHHh--cCCCCCCHHHHHHHHHH
Confidence            998887765          4567778888999999999999999986321   11111111  12245689999999999


Q ss_pred             hhccC
Q 039897          255 LACNH  259 (272)
Q Consensus       255 L~s~~  259 (272)
                      +++..
T Consensus       478 ~l~~~  482 (525)
T 3qp9_A          478 ALGHG  482 (525)
T ss_dssp             HHHHT
T ss_pred             HHhCC
Confidence            99776

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.96  E-value=2.7e-29  Score=210.82  Aligned_cols=196  Identities=30%  Similarity=0.362  Sum_probs=154.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||+|+||++++++|+++|++|++++|+....+                .    .+.+|+++.++++++++++  
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------~----~~~~D~~~~~~~~~~~~~~--   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----------------A----DLSTPGGRETAVAAVLDRC--   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------------C----CTTSHHHHHHHHHHHHHHH--
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----------------c----cccCCcccHHHHHHHHHHc--
Confidence            58999999999999999999999999999999754321                0    1678999999988888754  


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccCC---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHS---------  191 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~~---------  191 (272)
                       .+++|+||||||.....        ++|+..+++|+.+++++++++.+.|++.  ++||++||..++.+.         
T Consensus        60 -~~~~d~vi~~Ag~~~~~--------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  130 (255)
T 2dkn_A           60 -GGVLDGLVCCAGVGVTA--------ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEA  130 (255)
T ss_dssp             -TTCCSEEEECCCCCTTS--------SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHH
T ss_pred             -CCCccEEEECCCCCCcc--------hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhh
Confidence             37899999999985311        2378899999999999999999998664  899999998777543         


Q ss_pred             -----------------hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----CCHHHHHhhccC
Q 039897          192 -----------------PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----FSEEESAQFGSE  236 (272)
Q Consensus       192 -----------------~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~  236 (272)
                                       +.              ++.++.++.++||++++++||.+.|++....    ........+. .
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~-~  209 (255)
T 2dkn_A          131 MLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV-A  209 (255)
T ss_dssp             HHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCC-C
T ss_pred             hcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHH-H
Confidence                             11              4566777777899999999999999864221    1111111111 1


Q ss_pred             CCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          237 VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       237 ~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                       +.+++.+++|+|+++++++++. ..+++|+++++|
T Consensus       210 -~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~v~  243 (255)
T 2dkn_A          210 -PLGRGSEPREVAEAIAFLLGPQ-ASFIHGSVLFVD  243 (255)
T ss_dssp             -TTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             -HhcCCCCHHHHHHHHHHHhCCC-cccceeeEEEec
Confidence             6778899999999999999876 678999999886

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.96  E-value=4.5e-28  Score=197.46  Aligned_cols=185  Identities=21%  Similarity=0.246  Sum_probs=146.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |++|||||+||||++++++|+++  +|++++|+...   +.+..+++      ..   .++.+|+++++++++++++   
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~---~~~~~~~~------~~---~~~~~D~~~~~~~~~~~~~---   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGA---LAELAREV------GA---RALPADLADELEAKALLEE---   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHH---HHHHHHHH------TC---EECCCCTTSHHHHHHHHHH---
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHH---HHHHHHhc------cC---cEEEeeCCCHHHHHHHHHh---
Confidence            58999999999999999999988  99999997433   32222222      11   7889999999999999887   


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                       ++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++  .....++||++||..+..+.+.         
T Consensus        64 -~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  139 (207)
T 2yut_A           64 -AGPLDLLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHA--RFQKGARAVFFGAYPRYVQVPGFAAYAAAKG  139 (207)
T ss_dssp             -HCSEEEEEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHC--CEEEEEEEEEECCCHHHHSSTTBHHHHHHHH
T ss_pred             -cCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHH--HhcCCcEEEEEcChhhccCCCCcchHHHHHH
Confidence             689999999999854 467778899999999999999999999988  2223579999999876655432         


Q ss_pred             -----HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                           ++.++.+++++||++++|+||++.|++...           ...+.+++.+++|+|++++++++.+
T Consensus       140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-----------~~~~~~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          140 ALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP-----------LGGPPKGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG-----------GTSCCTTCBCHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc-----------cCCCCCCCCCHHHHHHHHHHHHhCC
Confidence                 578888888899999999999999987321           1234577889999999999999765

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=1.8e-27  Score=217.25  Aligned_cols=206  Identities=18%  Similarity=0.166  Sum_probs=167.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++++|||||++|||++++++|+++|+ +|++++|+..+.+...+..+++..    .+.++.++.||++|.+++.++++++
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ----LGVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh----cCCeEEEEEccCCCHHHHHHHHHHH
Confidence            68999999999999999999999999 899999986666666666666655    5778999999999999999999998


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  193 (272)
                      .+. +++|+||||||+.....++.+.+.++|+++|++|+.+.+++.+.+.+.+  .++||++||.++..+.++       
T Consensus       315 ~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~--~~~iV~~SS~a~~~g~~g~~~YaAa  391 (496)
T 3mje_A          315 PED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD--LDAFVLFSSGAAVWGSGGQPGYAAA  391 (496)
T ss_dssp             CTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC--CSEEEEEEEHHHHTTCTTCHHHHHH
T ss_pred             HHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC--CCEEEEEeChHhcCCCCCcHHHHHH
Confidence            776 7899999999996345789999999999999999999999999988764  469999999988777665       


Q ss_pred             ---HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ---ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ---~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                         ...++.+++.+||++++|+||++.+........ .+.....     .....+|++.+..+.+++..+
T Consensus       392 Ka~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~-----g~~~l~pe~~~~~l~~~l~~~  456 (496)
T 3mje_A          392 NAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQ-----GVLAMEPEHALGALDQMLEND  456 (496)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHT-----TEEEECHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhc-----CCCCCCHHHHHHHHHHHHcCC
Confidence               567888899999999999999997765432211 1111111     112347899999999988765

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=4.1e-27  Score=226.39  Aligned_cols=207  Identities=20%  Similarity=0.208  Sum_probs=169.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHH-HcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYA-LEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~-~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+|++|||||++|||+++|+.|+ ++|+ +|++++|+....+..++..+++..    .+.++.++.||++|.++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----~G~~v~~~~~Dvsd~~~v~~~~~  604 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA----YGAEVSLQACDVADRETLAKVLA  604 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh----cCCcEEEEEeecCCHHHHHHHHH
Confidence            58999999999999999999999 7999 599999987666677777777765    57789999999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                      ++.+.+ ++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.|.|    +||++||.++..+.++     
T Consensus       605 ~~~~~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l----~iV~~SS~ag~~g~~g~~~Ya  678 (795)
T 3slk_A          605 SIPDEH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV----ALVLFSSVSGVLGSGGQGNYA  678 (795)
T ss_dssp             TSCTTS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS----EEEEEEETHHHHTCSSCHHHH
T ss_pred             HHHHhC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC----EEEEEccHHhcCCCCCCHHHH
Confidence            998776 8999999999965 4789999999999999999999999999998877    8999999988777655     


Q ss_pred             -----HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                           .++|+.+++++||++|+|+||++.|.+......+.....+ .+... ....+++..+.+..++..+
T Consensus       679 Aaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~-~~~g~-~~l~~~e~~~~~~~~l~~~  747 (795)
T 3slk_A          679 AANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRL-ARSGL-LPISTEEGLSQFDAACGGA  747 (795)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHH-HHTTB-CCCCHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHH-HhcCC-CCCCHHHHHHHHHHHHhCC
Confidence                 6889999999999999999999998865332122222222 12222 2346677777776666554

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.93  E-value=1.8e-26  Score=242.40  Aligned_cols=225  Identities=14%  Similarity=0.076  Sum_probs=158.9

Q ss_pred             CCCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecccchh--hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           38 NKLRGKVALVTGGDSG-IGRAVAHCYALEGATVAFTYVKSQEE--KDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        38 ~~l~~k~vlVtGas~g-IG~aia~~l~~~G~~v~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      ..|+||++|||||++| ||+++|+.|+++|++|++++|+....  +.+++..+++.    ..+.++..+.+|++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~----~~G~~~~~v~~Dvtd~~~v~ 2207 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHA----RFDATLWVVPANMASYSDID 2207 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHC----CTTCEEEEEECCTTCHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHh----hcCCeEEEEEecCCCHHHHH
Confidence            3489999999999999 99999999999999999999975431  11233333332    24566788999999999999


Q ss_pred             HHHHHHHH----hcCCccEEEEcccc----cCCCCCcccCCHHHH----HHHHHhhhHHHHHHHHHHHhccccCC-----
Q 039897          115 RVVDEVVN----AYGKIDILVNNAAV----QYKAGSVEEIDEERL----ERVFRTNIFSHFFMTRHSLRHMNEGS-----  177 (272)
Q Consensus       115 ~~~~~~~~----~~g~ld~vI~~ag~----~~~~~~~~~~~~~~~----~~~~~~N~~~~~~l~~~~~~~~~~~g-----  177 (272)
                      ++++++.+    .+|++|+||||||+    ........+.+.++|    +..+++|+.+.+.+++.+.+.|++.+     
T Consensus      2208 ~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~ 2287 (3089)
T 3zen_D         2208 KLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRL 2287 (3089)
T ss_dssp             HHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred             HHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence            99999998    88999999999997    211122233344444    44599999999999999999986532     


Q ss_pred             -eEEEecCCCCccC---Chh---------HHHHHHH--HhhCCeEEEEEeccccc-CCCCCCCCCHHHHHhhccCCCCCC
Q 039897          178 -AIINTTSVEPLWH---SPE---------ARGLALQ--LVERGIRVNGVAPGPIW-TPLIPSSFSEEESAQFGSEVPMKR  241 (272)
Q Consensus       178 -~iv~vsS~~~~~~---~~~---------~~~la~e--~~~~gi~vn~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
                       .|+..++..+..+   .+.         ++++|.|  +++ +|+||+++||+|+ |++.......  . ......+.++
T Consensus      2288 ~ii~~~ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~~--~-~~~~~~~~r~ 2363 (3089)
T 3zen_D         2288 HVVLPGSPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDAI--V-SAVEEAGVTT 2363 (3089)
T ss_dssp             EEEEEECSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTTT--H-HHHGGGSCBC
T ss_pred             EEEEECCcccccCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchhH--H-HHHHhcCCCC
Confidence             2444454443222   111         7899999  664 6999999999998 6665332111  1 1112233333


Q ss_pred             CCCccchhhhhhhhhccCCCC-cccceeeccC
Q 039897          242 AGQPIEVAPCYVFLACNHCSS-YITGQVLHPN  272 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~-~~tG~~i~id  272 (272)
                       .+|+|||+.++||+|+. +. ..+|+.+.+|
T Consensus      2364 -~~PeEIA~avlfLaS~~-a~~~~~~~p~~vd 2393 (3089)
T 3zen_D         2364 -YTTDEMAAMLLDLCTVE-TKVAAAGAPVKVD 2393 (3089)
T ss_dssp             -EEHHHHHHHHHHTTSHH-HHHHHHHSCEEEE
T ss_pred             -CCHHHHHHHHHHHhChh-hhhHhcCCeEEEE
Confidence             38999999999999987 44 4445555443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=4.8e-25  Score=201.60  Aligned_cols=206  Identities=18%  Similarity=0.207  Sum_probs=160.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.++++|||||+||||.+++++|+++|++ |++++|+........+..+++..    .+.++.++.+|++|.+++.++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~----~g~~v~~~~~Dv~d~~~v~~~~~  299 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA----LGARTTVAACDVTDRESVRELLG  299 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHh----cCCEEEEEEeCCCCHHHHHHHHH
Confidence            35799999999999999999999999995 99999986554455555555544    46678899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+ ..++++|+||||||+.. ...+.+.+.++|++++++|+.|++++.+.+.+.  ..++||++||.++..+.++     
T Consensus       300 ~i-~~~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~g~~g~~~Ya  375 (486)
T 2fr1_A          300 GI-GDDVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPGLGGYA  375 (486)
T ss_dssp             TS-CTTSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTTCTTTH
T ss_pred             HH-HhcCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcCCCCCCHHHH
Confidence            98 56789999999999864 467889999999999999999999999988653  3579999999876655443     


Q ss_pred             -----HHHHHHHHhhCCeEEEEEecccccCC-CCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -----ARGLALQLVERGIRVNGVAPGPIWTP-LIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -----~~~la~e~~~~gi~vn~i~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                           ...++.++..+|+++++|+||++.++ |....    ....+..  ......+++|+++.+..++...
T Consensus       376 aaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~----~~~~~~~--~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          376 PGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP----VADRFRR--HGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEECCBC----------------CTT--TTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchh----HHHHHHh--cCCCCCCHHHHHHHHHHHHhCC
Confidence                 45678888889999999999999876 43211    1111111  1123568999999999998765

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.92  E-value=1.1e-24  Score=181.03  Aligned_cols=195  Identities=15%  Similarity=0.157  Sum_probs=141.4

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCc-eEEeccCCChHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDP-MAISADLGFDENCK  114 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~  114 (272)
                      ...+|+||+||||||+|+||++++++|+++|++|++++|+....+.+.             ..++ .++.+|++      
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-------------~~~~~~~~~~Dl~------   75 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-------------ERGASDIVVANLE------   75 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-------------HTTCSEEEECCTT------
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-------------hCCCceEEEcccH------
Confidence            356799999999999999999999999999999999999865433221             1256 88999998      


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---  191 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---  191 (272)
                         +.+.+.++++|+||||||....         ++++..+++|+.++.++++++...  ..++||++||..+..+.   
T Consensus        76 ---~~~~~~~~~~D~vi~~ag~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~  141 (236)
T 3e8x_A           76 ---EDFSHAFASIDAVVFAAGSGPH---------TGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQGP  141 (236)
T ss_dssp             ---SCCGGGGTTCSEEEECCCCCTT---------SCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGGSC
T ss_pred             ---HHHHHHHcCCCEEEECCCCCCC---------CCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCCCh
Confidence               3334455789999999997431         347889999999999999998653  34799999998766553   


Q ss_pred             -hh-----HHHHHHH-HhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcc
Q 039897          192 -PE-----ARGLALQ-LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYI  264 (272)
Q Consensus       192 -~~-----~~~la~e-~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~  264 (272)
                       +.     +|..+.+ +...||+++.+.||.+.++.......     ..........+.+++|+|++++++++.+   ..
T Consensus       142 ~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~~~~~-----~~~~~~~~~~~i~~~Dva~~~~~~~~~~---~~  213 (236)
T 3e8x_A          142 MNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEESTGKVT-----VSPHFSEITRSITRHDVAKVIAELVDQQ---HT  213 (236)
T ss_dssp             GGGHHHHHHHHHHHHHHHHSSSEEEEEEECSEECSCCCSEEE-----EESSCSCCCCCEEHHHHHHHHHHHTTCG---GG
T ss_pred             hhhhhHHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCCCeEE-----eccCCCcccCcEeHHHHHHHHHHHhcCc---cc
Confidence             11     4444444 34689999999999999986432110     0111122355678999999999999865   37


Q ss_pred             cceeecc
Q 039897          265 TGQVLHP  271 (272)
Q Consensus       265 tG~~i~i  271 (272)
                      +|+++++
T Consensus       214 ~g~~~~v  220 (236)
T 3e8x_A          214 IGKTFEV  220 (236)
T ss_dssp             TTEEEEE
T ss_pred             cCCeEEE
Confidence            7888876

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=6.1e-24  Score=195.13  Aligned_cols=202  Identities=20%  Similarity=0.202  Sum_probs=160.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .++++|||||+||||.+++++|+++|+ +|++++|+........+..+++..    .+.++.++.||++|.+++.++++.
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG----HGCEVVHAACDVAERDALAALVTA  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT----TTCEEEEEECCSSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh----cCCEEEEEEeCCCCHHHHHHHHhc
Confidence            579999999999999999999999999 699999986554455555555543    466788999999999999999876


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~------  193 (272)
                           +++|+||||||+.. ...+.+.+.++|+.++++|+.|.+++.+.+.+. +..++||++||.++..+.++      
T Consensus       334 -----~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~~g~~g~~~Yaa  406 (511)
T 2z5l_A          334 -----YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGTWGNAGQGAYAA  406 (511)
T ss_dssp             -----SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGTTCCTTBHHHHH
T ss_pred             -----CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhcCCCCCCHHHHH
Confidence                 68999999999865 467888999999999999999999999877543 34579999999988776654      


Q ss_pred             ----HHHHHHHHhhCCeEEEEEecccc-cCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ----ARGLALQLVERGIRVNGVAPGPI-WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ----~~~la~e~~~~gi~vn~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                          ...++.++...|+++++|+||++ +|.|.... ........     .....+++|+++.+..++...
T Consensus       407 aKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~-~~~~~~~~-----g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          407 ANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGA-GEESLSRR-----GLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCH-HHHHHHHH-----TBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCcEEEEECCcccCCcccccc-cHHHHHhc-----CCCCCCHHHHHHHHHHHHhCC
Confidence                45677778888999999999999 77776431 11111111     123568999999999988765

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=4.4e-23  Score=171.82  Aligned_cols=191  Identities=13%  Similarity=0.027  Sum_probs=140.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +|++|++|||||+|+||++++++|+++|+  +|++++|+.......             ...++.++.+|+++++++.++
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-------------~~~~~~~~~~D~~d~~~~~~~   81 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------------AYKNVNQEVVDFEKLDDYASA   81 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------------GGGGCEEEECCGGGGGGGGGG
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-------------ccCCceEEecCcCCHHHHHHH
Confidence            36789999999999999999999999999  999999986543221             012467899999999888776


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++       ++|+||||||....        ..+++..+++|+.++.++++++...  ..++||++||..++.....   
T Consensus        82 ~~-------~~d~vi~~ag~~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~iv~~SS~~~~~~~~~~Y~  144 (242)
T 2bka_A           82 FQ-------GHDVGFCCLGTTRG--------KAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADKSSNFLYL  144 (242)
T ss_dssp             GS-------SCSEEEECCCCCHH--------HHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTCSSHHH
T ss_pred             hc-------CCCEEEECCCcccc--------cCCcccceeeeHHHHHHHHHHHHHC--CCCEEEEEccCcCCCCCcchHH
Confidence            64       79999999997421        2356888999999999999987653  2469999999877653221   


Q ss_pred             -HHHHHHHHh-hCCe-EEEEEecccccCCCCCCCCCHHHHHhhccCCC----CCCCCCccchhhhhhhhhccC
Q 039897          194 -ARGLALQLV-ERGI-RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP----MKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -~~~la~e~~-~~gi-~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~L~s~~  259 (272)
                       +|.....+. ..++ ++++|+||.+.|++.................|    .+++.+++|+|++++++++++
T Consensus       145 ~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  217 (242)
T 2bka_A          145 QVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRP  217 (242)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCc
Confidence             444443333 3477 79999999999986432111112222222334    456789999999999999876

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.88  E-value=3e-22  Score=166.48  Aligned_cols=181  Identities=15%  Similarity=0.043  Sum_probs=128.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +..|+||||||+|+||++++++|+++| ++|++++|+......+             ...++.++.+|++|++++.++++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------------~~~~~~~~~~Dl~d~~~~~~~~~   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------------YPTNSQIIMGDVLNHAALKQAMQ   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------------CCTTEEEEECCTTCHHHHHHHHT
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------------ccCCcEEEEecCCCHHHHHHHhc
Confidence            445899999999999999999999999 8999999986543221             34568899999999999888875


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                             ++|+||||+|...         .              ...++.+++.|++  .++||++||...+...+.   
T Consensus        88 -------~~D~vv~~a~~~~---------~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~  137 (236)
T 3qvo_A           88 -------GQDIVYANLTGED---------L--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFV  137 (236)
T ss_dssp             -------TCSEEEEECCSTT---------H--------------HHHHHHHHHHHHHTTCCEEEEECCCCC---------
T ss_pred             -------CCCEEEEcCCCCc---------h--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccc
Confidence                   6899999998621         0              1224456666654  368999999876654332   


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCC-CCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP-MKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   .......+.+.||++++|+||++.++.....      .......+ .+++.+++|+|++++++++++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~~~------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~  211 (236)
T 3qvo_A          138 EWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDY------ELTSRNEPFKGTIVSRKSVAALITDIIDKP  211 (236)
T ss_dssp             -------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCSCCCC------EEECTTSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred             cchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCcce------EEeccCCCCCCcEECHHHHHHHHHHHHcCc
Confidence                         1222344557899999999999988754221      11111122 356779999999999999986


Q ss_pred             CCCcccceeecc
Q 039897          260 CSSYITGQVLHP  271 (272)
Q Consensus       260 ~~~~~tG~~i~i  271 (272)
                       ..++ |+++.+
T Consensus       212 -~~~~-g~~~~i  221 (236)
T 3qvo_A          212 -EKHI-GENIGI  221 (236)
T ss_dssp             -TTTT-TEEEEE
T ss_pred             -cccc-CeeEEe
Confidence             5455 777765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.88  E-value=1.8e-22  Score=170.88  Aligned_cols=173  Identities=15%  Similarity=0.110  Sum_probs=130.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|+||||||+|+||++++++|+++|++|++++|+....                ...++.++.+|++|.+++.++++ 
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~Dl~d~~~~~~~~~-   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----------------AGPNEECVQCDLADANAVNAMVA-   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC----------------CCTTEEEEECCTTCHHHHHHHHT-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc----------------cCCCCEEEEcCCCCHHHHHHHHc-
Confidence            4578999999999999999999999999999999985432                24568899999999999988886 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-------  192 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-------  192 (272)
                            ++|+||||||...         .++|++.+++|+.+++++++++...  ..++||++||..++...+       
T Consensus        64 ------~~D~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~g~~~~~~~~~e  126 (267)
T 3rft_A           64 ------GCDGIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTIGYYPQTERLGP  126 (267)
T ss_dssp             ------TCSEEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGTTSBTTSCBCT
T ss_pred             ------CCCEEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcchHHhCCCCCCCCCCC
Confidence                  6999999999832         2346889999999999999999653  347999999987663211       


Q ss_pred             ---------h------HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          193 ---------E------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       193 ---------~------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                               .      ...+...++ +.|++++.|.||.+.+++....    ..         ..+.+++|++..+..++
T Consensus       127 ~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~~----~~---------~~~~~~~d~a~~~~~~~  193 (267)
T 3rft_A          127 DVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNYR----ML---------STWFSHDDFVSLIEAVF  193 (267)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCSTT----HH---------HHBCCHHHHHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCCC----ce---------eeEEcHHHHHHHHHHHH
Confidence                     1      233333333 4589999999999988754221    11         11235677777777766


Q ss_pred             ccC
Q 039897          257 CNH  259 (272)
Q Consensus       257 s~~  259 (272)
                      ..+
T Consensus       194 ~~~  196 (267)
T 3rft_A          194 RAP  196 (267)
T ss_dssp             HCS
T ss_pred             hCC
Confidence            544

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.86  E-value=4.6e-21  Score=167.06  Aligned_cols=214  Identities=16%  Similarity=0.056  Sum_probs=155.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecccchhhh---------HHHHHHHHHHhhhcCCCCceEEeccC
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYA-LEGATVAFTYVKSQEEKD---------AQETLEILREAKTSDAKDPMAISADL  107 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~-~~G~~v~i~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (272)
                      ..+.+|++||||||+|||++++..|+ +.|++++++++..+..++         .....+.+.+    .+.+...+.||+
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~----~G~~a~~i~~Dv  121 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR----EGLYSVTIDGDA  121 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----HTCCEEEEESCT
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH----cCCCceeEeCCC
Confidence            34678999999999999999999998 789999999987654332         2222233333    578899999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEEcccccCCCC------------C---------------------cccCCH---HHH
Q 039897          108 GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG------------S---------------------VEEIDE---ERL  151 (272)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~------------~---------------------~~~~~~---~~~  151 (272)
                      +++++++++++++.+.+|++|+||||++......            +                     +...+.   +.+
T Consensus       122 ~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T  201 (401)
T 4ggo_A          122 FSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAAT  201 (401)
T ss_dssp             TSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHH
Confidence            9999999999999999999999999999752211            1                     112233   455


Q ss_pred             HHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----------------HHHHHHHHhhCCeEEEEEeccc
Q 039897          152 ERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------------ARGLALQLVERGIRVNGVAPGP  215 (272)
Q Consensus       152 ~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------------~~~la~e~~~~gi~vn~i~PG~  215 (272)
                      ..+|....+..|...+...++|.++++++.+|+.......|.                ++.|+.+++  ++++|++++|.
T Consensus       202 ~~vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a  279 (401)
T 4ggo_A          202 VKVMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKG  279 (401)
T ss_dssp             HHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCC
T ss_pred             HHHHhhhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCc
Confidence            666777888889999999999999999999999876544432                688888886  48999999999


Q ss_pred             ccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          216 IWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       216 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      +.|........-..+-.+.-+ -++..++-|...+.+..|..+
T Consensus       280 ~vT~AssaIP~~ply~~~l~k-vmk~~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          280 LVTRASAVIPVIPLYLASLFK-VMKEKGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             CCCTTGGGSSSHHHHHHHHHH-HHHHHTCCCCHHHHHHHHHHH
T ss_pred             cccchhhcCCCchHHHHHHHH-HHHhcCCCCchHHHHHHHHHH
Confidence            999876443221221111111 122334567777777777754

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.86  E-value=1.8e-21  Score=170.75  Aligned_cols=205  Identities=14%  Similarity=0.067  Sum_probs=143.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHc-CC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALE-GA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~-G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..+++|+||||||+|+||++++++|+++ |+ +|++++|+......+.+   .+      ...++.++.+|++|.+++.+
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~---~~------~~~~v~~~~~Dl~d~~~l~~   87 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM---EF------NDPRMRFFIGDVRDLERLNY   87 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH---HH------CCTTEEEEECCTTCHHHHHH
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH---Hh------cCCCEEEEECCCCCHHHHHH
Confidence            3478999999999999999999999999 98 99999997544333222   22      24578899999999988877


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++       ++|+|||+||....  +   ....+..+.+++|+.++.++++++.+..  .++||++||.....+...  
T Consensus        88 ~~~-------~~D~Vih~Aa~~~~--~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS~~~~~p~~~Y~  153 (344)
T 2gn4_A           88 ALE-------GVDICIHAAALKHV--P---IAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALSTDKAANPINLYG  153 (344)
T ss_dssp             HTT-------TCSEEEECCCCCCH--H---HHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSSCCSHHH
T ss_pred             HHh-------cCCEEEECCCCCCC--C---chhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecCCccCCCccHHH
Confidence            764       69999999997431  1   1223456889999999999999998753  369999999766554322  


Q ss_pred             -H----HHHHHHHh----hCCeEEEEEecccccCCCCCCCCCHHHHHhh--cc-CC------CCCCCCCccchhhhhhhh
Q 039897          194 -A----RGLALQLV----ERGIRVNGVAPGPIWTPLIPSSFSEEESAQF--GS-EV------PMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 -~----~~la~e~~----~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~--~~-~~------~~~~~~~~~dva~~~~~L  255 (272)
                       +    ..+...+.    +.|++++++.||.|.++...  ..+......  .. ..      ....+.+++|+|++++++
T Consensus       154 ~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~--~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~  231 (344)
T 2gn4_A          154 ATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS--VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKS  231 (344)
T ss_dssp             HHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS--HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC--HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHH
Confidence             2    22333333    46899999999999886521  111111111  11 11      112356889999999999


Q ss_pred             hccCCCCcccceeecc
Q 039897          256 ACNHCSSYITGQVLHP  271 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~i  271 (272)
                      +...    ..|+++++
T Consensus       232 l~~~----~~g~~~~~  243 (344)
T 2gn4_A          232 LKRM----HGGEIFVP  243 (344)
T ss_dssp             HHHC----CSSCEEEE
T ss_pred             Hhhc----cCCCEEec
Confidence            8754    24666654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.86  E-value=8.2e-21  Score=156.08  Aligned_cols=178  Identities=7%  Similarity=0.000  Sum_probs=126.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecccc-hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYA-LEGATVAFTYVKSQ-EEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~-~~G~~v~i~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |++|||||+|+||++++++|+ ++|++|++++|+.. ..+.+.       .    ...++.++.+|++|++++.++++  
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-------~----~~~~~~~~~~D~~d~~~~~~~~~--   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-------I----DHERVTVIEGSFQNPGXLEQAVT--   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-------H----TSTTEEEEECCTTCHHHHHHHHT--
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-------c----CCCceEEEECCCCCHHHHHHHHc--
Confidence            789999999999999999999 89999999999854 322221       1    35678899999999999888875  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-----  193 (272)
                           ++|+||||+|..                    |+.     ++.+++.|++  .++||++||...+...+.     
T Consensus        73 -----~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~  122 (221)
T 3r6d_A           73 -----NAEVVFVGAMES--------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKW  122 (221)
T ss_dssp             -----TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHH
T ss_pred             -----CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccc
Confidence                 689999999863                    222     5666666654  368999999987765432     


Q ss_pred             -----------H-HHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh--ccC
Q 039897          194 -----------A-RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA--CNH  259 (272)
Q Consensus       194 -----------~-~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~--s~~  259 (272)
                                 . ..+...+...||+++.|+||++.++.........    .......+...+++|+|+++++++  +++
T Consensus       123 ~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~~----~~~~~~~~~~~~~~dvA~~~~~l~~~~~~  198 (221)
T 3r6d_A          123 TFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYELI----PEGAQFNDAQVSREAVVKAIFDILHAADE  198 (221)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEECCTTCCCCEEE----CTTSCCCCCEEEHHHHHHHHHHHHTCSCC
T ss_pred             cccccccHHHHHHHHHHHHHHhCCCCEEEEechhhcCCCCCcceeec----cCCccCCCceeeHHHHHHHHHHHHHhcCh
Confidence                       1 2223345567999999999999887322211100    011112233668899999999999  776


Q ss_pred             CCCccccee
Q 039897          260 CSSYITGQV  268 (272)
Q Consensus       260 ~~~~~tG~~  268 (272)
                       ..++++.+
T Consensus       199 -~~~~~~~~  206 (221)
T 3r6d_A          199 -TPFHRTSI  206 (221)
T ss_dssp             -GGGTTEEE
T ss_pred             -hhhhccee
Confidence             55555443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.86  E-value=7.5e-21  Score=165.77  Aligned_cols=199  Identities=12%  Similarity=0.006  Sum_probs=138.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEE-eccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI-SADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~  116 (272)
                      ..+++++||||||+|+||++++++|+++|++|++++|+......+.+.   +...   .+.++.++ .+|+++.+++.++
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~---~~~~~~~~~~~D~~d~~~~~~~   80 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR---WDAK---YPGRFETAVVEDMLKQGAYDEV   80 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HHHH---STTTEEEEECSCTTSTTTTTTT
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHH---hhcc---CCCceEEEEecCCcChHHHHHH
Confidence            457889999999999999999999999999999999975443333222   2110   23567778 8999999887766


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-C----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-S----  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-~----  191 (272)
                      ++       ++|+||||||.....        +++...+++|+.++.++++++.+. ...++||++||.+.++. .    
T Consensus        81 ~~-------~~d~vih~A~~~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~  144 (342)
T 1y1p_A           81 IK-------GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             TT-------TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCC
T ss_pred             Hc-------CCCEEEEeCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHHhcCCCCCCC
Confidence            54       699999999985321        235678999999999999999763 22469999999765421 0    


Q ss_pred             ---------------------------hh-------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----H
Q 039897          192 ---------------------------PE-------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----E  227 (272)
Q Consensus       192 ---------------------------~~-------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----~  227 (272)
                                                 +.             ++.++.++.. +++++++.||.+.+++......    .
T Consensus       145 ~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~  223 (342)
T 1y1p_A          145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTS  223 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHH
T ss_pred             CcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHH
Confidence                                       11             2233333332 8999999999999987543211    1


Q ss_pred             HHHHhhcc--------CCCCCCCCCccchhhhhhhhhccC
Q 039897          228 EESAQFGS--------EVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       228 ~~~~~~~~--------~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      ........        ..+...+.+++|+|+++++++...
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  263 (342)
T 1y1p_A          224 GWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP  263 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc
Confidence            11111111        113445678999999999998653

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.85  E-value=7.5e-21  Score=166.21  Aligned_cols=210  Identities=12%  Similarity=0.087  Sum_probs=145.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||+|+||++++++|+++|++|++++|..+...  ......+.     ...++.++.+|+++.+++.++++..  
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~l~-----~~~~~~~~~~Dl~d~~~~~~~~~~~--   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLS-----SLGNFEFVHGDIRNKNDVTRLITKY--   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHH-----TTCCCEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc--hhhhhhhc-----cCCceEEEEcCCCCHHHHHHHHhcc--
Confidence            57999999999999999999999999999998542211  11122222     2346889999999999999888752  


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC------------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH------------  190 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~------------  190 (272)
                         ++|+||||||....     +.+.+++...+++|+.++.++++++.+.+. .++||++||.+.+..            
T Consensus        73 ---~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~e~~~~  143 (347)
T 1orr_A           73 ---MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS-NCNIIYSSTNKVYGDLEQYKYNETETR  143 (347)
T ss_dssp             ---CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             ---CCCEEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeccHHHhCCCCcCCccccccc
Confidence               69999999997421     234557788999999999999999988764 269999999754321            


Q ss_pred             ----------------Chh-----H----HHHHHHHhh-CCeEEEEEecccccCCCCCCCCC----HHHHHhh-ccCC--
Q 039897          191 ----------------SPE-----A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFS----EEESAQF-GSEV--  237 (272)
Q Consensus       191 ----------------~~~-----~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~----~~~~~~~-~~~~--  237 (272)
                                      .+.     +    ..+..+++. .|++++.+.||.+.++.......    ....... ....  
T Consensus       144 ~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (347)
T 1orr_A          144 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI  223 (347)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTC
T ss_pred             ccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccC
Confidence                            011     2    223333332 38999999999999987532211    1111111 1110  


Q ss_pred             --CC---------CCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          238 --PM---------KRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       238 --~~---------~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                        +.         ..+.+++|+|+++++++..  ....+|++++++
T Consensus       224 ~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~--~~~~~g~~~~v~  267 (347)
T 1orr_A          224 NKPFTISGNGKQVRDVLHAEDMISLYFTALAN--VSKIRGNAFNIG  267 (347)
T ss_dssp             CCCEEEESSSCCEEECEEHHHHHHHHHHHHHT--HHHHTTCEEEES
T ss_pred             CCCeEEecCCcceEeeEEHHHHHHHHHHHHhc--cccCCCCEEEeC
Confidence              11         1255899999999999863  235678888763

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.85  E-value=1e-20  Score=165.10  Aligned_cols=212  Identities=15%  Similarity=0.074  Sum_probs=144.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+++||||||+|+||++++++|+++|++|++++|+........+.+...      .+.++.++.+|+++.+++.++++. 
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~-   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI------TGKTPAFHETDVSDERALARIFDA-   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH------HSCCCEEECCCTTCHHHHHHHHHH-
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh------cCCCceEEEeecCCHHHHHHHHhc-
Confidence            4689999999999999999999999999999999876655444333322      245788999999999999998875 


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---------  191 (272)
                          +++|+||||||....     ....+...+.+++|+.++.++++++...  ..++||++||.+.+...         
T Consensus        77 ----~~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~  145 (341)
T 3enk_A           77 ----HPITAAIHFAALKAV-----GESVAKPIEYYRNNLDSLLSLLRVMRER--AVKRIVFSSSATVYGVPERSPIDETF  145 (341)
T ss_dssp             ----SCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGBCSCSSSSBCTTS
T ss_pred             ----cCCcEEEECcccccc-----CccccChHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEecceEecCCCCCCCCCCC
Confidence                579999999998432     1123445677899999999999887653  24699999997654221         


Q ss_pred             ------hh--HHH----HHHHHhh-C-CeEEEEEecccccCCCCCCCC--------C---HHHHHhh-cc----------
Q 039897          192 ------PE--ARG----LALQLVE-R-GIRVNGVAPGPIWTPLIPSSF--------S---EEESAQF-GS----------  235 (272)
Q Consensus       192 ------~~--~~~----la~e~~~-~-gi~vn~i~PG~v~t~~~~~~~--------~---~~~~~~~-~~----------  235 (272)
                            +.  +|.    +...++. . +++++.+.|+.+..+.....+        .   ....... ..          
T Consensus       146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  225 (341)
T 3enk_A          146 PLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSD  225 (341)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCc
Confidence                  11  232    2333322 2 599999999999776431100        0   1111111 11          


Q ss_pred             -----CCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          236 -----EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       236 -----~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                           ......+.+.+|+|+++++++... .....|+++++
T Consensus       226 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~~ni  265 (341)
T 3enk_A          226 YPTPDGTGVRDYIHVVDLARGHIAALDAL-ERRDASLTVNL  265 (341)
T ss_dssp             SSSTTSSCEECEEEHHHHHHHHHHHHHHH-HHHTSCEEEEE
T ss_pred             cCCCCCCeeEeeEEHHHHHHHHHHHHHhh-hcCCcceEEEe
Confidence                 111223557799999999998752 12355777776

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.85  E-value=8.6e-21  Score=164.29  Aligned_cols=201  Identities=20%  Similarity=0.161  Sum_probs=142.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ...-++||||||+|+||++++++|+++|++|++++|+... ..                .++.++.+|+++.+++.++++
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----------------l~~~~~~~Dl~d~~~~~~~~~   71 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----------------PNVEMISLDIMDSQRVKKVIS   71 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----------------TTEEEEECCTTCHHHHHHHHH
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----------------ceeeEEECCCCCHHHHHHHHH
Confidence            3556899999999999999999999999999999997543 11                046788999999999988887


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-------
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-------  191 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-------  191 (272)
                      .     +++|+||||||....     ..+.+++...+++|+.++.++++++ +.+...++||++||.+.+...       
T Consensus        72 ~-----~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~~~~~iv~~SS~~v~g~~~~~~~~~  140 (321)
T 2pk3_A           72 D-----IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSNLDCRILTIGSSEEYGMILPEESPV  140 (321)
T ss_dssp             H-----HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHTCCCEEEEEEEGGGTBSCCGGGCSB
T ss_pred             h-----cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhCCCCeEEEEccHHhcCCCCCCCCCC
Confidence            5     369999999997431     1223457889999999999999999 555445799999998655432       


Q ss_pred             -------hh-----HH----HHHHHHhh-CCeEEEEEecccccCCCCCCCC-CHHHHHhhc--------------cCCCC
Q 039897          192 -------PE-----AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSSF-SEEESAQFG--------------SEVPM  239 (272)
Q Consensus       192 -------~~-----~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~--------------~~~~~  239 (272)
                             +.     +|    .+...++. .|++++.+.||.+.++...... .........              ...+.
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  220 (321)
T 2pk3_A          141 SEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAV  220 (321)
T ss_dssp             CTTSCCBCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCE
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcE
Confidence                   11     22    22333322 4899999999999988754321 111111111              11223


Q ss_pred             CCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          240 KRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ..+.+++|+|++++++++..    .+|+++++
T Consensus       221 ~~~v~v~Dva~a~~~~~~~~----~~g~~~~i  248 (321)
T 2pk3_A          221 RDFTDVRDIVQAYWLLSQYG----KTGDVYNV  248 (321)
T ss_dssp             EEEEEHHHHHHHHHHHHHHC----CTTCEEEE
T ss_pred             EeeEEHHHHHHHHHHHHhCC----CCCCeEEe
Confidence            34678999999999998754    45777766

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.84  E-value=8.1e-21  Score=165.46  Aligned_cols=206  Identities=14%  Similarity=0.054  Sum_probs=142.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccc--hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQ--EEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ++++||||||+|+||++++++|+++|  ++|++++|...  ..+.+.    .+.     ...++.++.+|+++.+++.++
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~----~~~-----~~~~~~~~~~Dl~d~~~~~~~   72 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLK----DLE-----DDPRYTFVKGDVADYELVKEL   72 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGT----TTT-----TCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHh----hhc-----cCCceEEEEcCCCCHHHHHHH
Confidence            45689999999999999999999997  89999998642  112111    110     245688899999999988887


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----  191 (272)
                      +       +++|+||||||....     +.+.+++...+++|+.++.++++++.+. ...++||++||.+.+...     
T Consensus        73 ~-------~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~  139 (336)
T 2hun_A           73 V-------RKVDGVVHLAAESHV-----DRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDILKGSF  139 (336)
T ss_dssp             H-------HTCSEEEECCCCCCH-----HHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCSSSCB
T ss_pred             h-------hCCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCCCCCc
Confidence            7       379999999997431     2344567889999999999999999886 334799999997543211     


Q ss_pred             ----------hh--HH----HHHHHHhh-CCeEEEEEecccccCCCCCCC-CCHHHHHhhcc---------CCCCCCCCC
Q 039897          192 ----------PE--AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGS---------EVPMKRAGQ  244 (272)
Q Consensus       192 ----------~~--~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~---------~~~~~~~~~  244 (272)
                                +.  +|    .+...++. .|++++.+.||.+.++..... ...........         ..+...+.+
T Consensus       140 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  219 (336)
T 2hun_A          140 TENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLY  219 (336)
T ss_dssp             CTTBCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEE
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEE
Confidence                      01  22    33333332 589999999999999875321 11111111111         112234668


Q ss_pred             ccchhhhhhhhhccCCCCcccceeeccC
Q 039897          245 PIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       245 ~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++|+|++++++++..    .+|++++++
T Consensus       220 v~Dva~~~~~~~~~~----~~g~~~~v~  243 (336)
T 2hun_A          220 VEDHVRAIELVLLKG----ESREIYNIS  243 (336)
T ss_dssp             HHHHHHHHHHHHHHC----CTTCEEEEC
T ss_pred             HHHHHHHHHHHHhCC----CCCCEEEeC
Confidence            899999999998654    368888763

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.84  E-value=3.8e-20  Score=162.65  Aligned_cols=200  Identities=17%  Similarity=0.112  Sum_probs=141.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .|++++||||||+|+||++++++|+++|++|++++|+......+.+.+.        ...++.++.+|+++.+++.++++
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~   77 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------VADGMQSEIGDIRDQNKLLESIR   77 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------TTTTSEEEECCTTCHHHHHHHHH
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--------cCCceEEEEccccCHHHHHHHHH
Confidence            3678999999999999999999999999999999998655443332211        24578899999999999998887


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-------
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-------  191 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-------  191 (272)
                      .+     ++|+||||||...     ...+.+++...+++|+.++.++++++.+. ...++||++||...+...       
T Consensus        78 ~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~  146 (357)
T 1rkx_A           78 EF-----QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWIWGYR  146 (357)
T ss_dssp             HH-----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSSSCBC
T ss_pred             hc-----CCCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEecCHHHhCCCCcCCCCC
Confidence            65     6999999999622     12345677889999999999999999774 335799999997533210       


Q ss_pred             ------h---h----------HHHHHHHHh------hCCeEEEEEecccccCCCCCCC--CCHHHHHhhcc--CC-----
Q 039897          192 ------P---E----------ARGLALQLV------ERGIRVNGVAPGPIWTPLIPSS--FSEEESAQFGS--EV-----  237 (272)
Q Consensus       192 ------~---~----------~~~la~e~~------~~gi~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~--~~-----  237 (272)
                            +   .          ++.++.++.      +.|++++.+.||.+.++.....  ...........  ..     
T Consensus       147 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~  226 (357)
T 1rkx_A          147 ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNP  226 (357)
T ss_dssp             TTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCT
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCC
Confidence                  0   0          233333332      3489999999999998764211  11111111111  11     


Q ss_pred             -CCCCCCCccchhhhhhhhhc
Q 039897          238 -PMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       238 -~~~~~~~~~dva~~~~~L~s  257 (272)
                       ....+.+.+|+|++++.++.
T Consensus       227 ~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          227 HAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             TCEECCEETHHHHHHHHHHHH
T ss_pred             CCeeccEeHHHHHHHHHHHHH
Confidence             12235678899999998875

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.84  E-value=9.4e-21  Score=158.17  Aligned_cols=203  Identities=11%  Similarity=-0.019  Sum_probs=142.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++|++|||||+|+||++++++|+++  |++|++++|+...   +..           ...++.++.+|+++.+++.+++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~---~~~-----------~~~~~~~~~~D~~d~~~~~~~~   67 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG---KEK-----------IGGEADVFIGDITDADSINPAF   67 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH---HHH-----------TTCCTTEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc---hhh-----------cCCCeeEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999  8999999997432   111           2346788999999999888877


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCC--------cccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGS--------VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW  189 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~--------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~  189 (272)
                      +       ++|+||||||.......        ..+...+++...+++|+.++.++++++...  ..++||++||..+..
T Consensus        68 ~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~~  138 (253)
T 1xq6_A           68 Q-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTN  138 (253)
T ss_dssp             T-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTC
T ss_pred             c-------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc--CCCEEEEEcCccCCC
Confidence            5       59999999997532110        122233445567899999999999988754  236999999987643


Q ss_pred             CChh-----------HHHHHHHHh-hCCeEEEEEecccccCCCCCCC--CCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          190 HSPE-----------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSS--FSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       190 ~~~~-----------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      ....           ++..+..+. ..|++++.+.||.+.++.....  ........+.   ...++.+++|+|++++++
T Consensus       139 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dva~~~~~~  215 (253)
T 1xq6_A          139 PDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ---TDTKTVPRADVAEVCIQA  215 (253)
T ss_dssp             TTCGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSCEEEESTTGGGG---SSCCEEEHHHHHHHHHHH
T ss_pred             CCCccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhhhhccCCcCCcC---CCCcEEcHHHHHHHHHHH
Confidence            2111           344444433 4799999999999988763211  0000000111   123467899999999999


Q ss_pred             hccCCCCcccceeecc
Q 039897          256 ACNHCSSYITGQVLHP  271 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~i  271 (272)
                      ++.+   ..+|+++++
T Consensus       216 ~~~~---~~~g~~~~i  228 (253)
T 1xq6_A          216 LLFE---EAKNKAFDL  228 (253)
T ss_dssp             TTCG---GGTTEEEEE
T ss_pred             HcCc---cccCCEEEe
Confidence            9764   346787775

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.84  E-value=3.9e-20  Score=161.10  Aligned_cols=204  Identities=11%  Similarity=0.072  Sum_probs=140.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++++++||||||+|+||++++++|+++|++|++++|+........+           .-.++.++.+|+++.+++.++
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~l~~v~~~~~Dl~d~~~~~~~   83 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP-----------PVAGLSVIEGSVTDAGLLERA   83 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC-----------SCTTEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh-----------ccCCceEEEeeCCCHHHHHHH
Confidence            456889999999999999999999999999999999996543221100           114678899999999999988


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----  191 (272)
                      ++.+     ++|+||||||.... .     +.+++.  +++|+.++.++++++...  ..++||++||.+.+...     
T Consensus        84 ~~~~-----~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~  148 (330)
T 2pzm_A           84 FDSF-----KPTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASKA--GVKRLLNFQTALCYGRPATVPI  148 (330)
T ss_dssp             HHHH-----CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHH--TCSEEEEEEEGGGGCSCSSSSB
T ss_pred             Hhhc-----CCCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCccCCC
Confidence            8765     79999999998532 1     344555  999999999999999753  34699999998664332     


Q ss_pred             -------hh-----HHHHHHHHhhC-CeEEEEEecccccCCCCCCCCCHHHHHhh-------ccCCCCCCCCCccchhh-
Q 039897          192 -------PE-----ARGLALQLVER-GIRVNGVAPGPIWTPLIPSSFSEEESAQF-------GSEVPMKRAGQPIEVAP-  250 (272)
Q Consensus       192 -------~~-----~~~la~e~~~~-gi~vn~i~PG~v~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~dva~-  250 (272)
                             +.     ++..+..+... ++....|.|+.+..+..............       .... ...+.+++|+|+ 
T Consensus       149 ~~~E~~~~~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~  227 (330)
T 2pzm_A          149 PIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAI  227 (330)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHH
T ss_pred             CcCCCCCCCChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHH
Confidence                   11     34444444332 56666666666655442111111111111       1111 345678999999 


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++++++.. .    |++++++
T Consensus       228 a~~~~~~~~-~----g~~~~v~  244 (330)
T 2pzm_A          228 ADLSLQEGR-P----TGVFNVS  244 (330)
T ss_dssp             HHHHTSTTC-C----CEEEEES
T ss_pred             HHHHHhhcC-C----CCEEEeC
Confidence            999998764 2    7887763

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=1.3e-20  Score=166.13  Aligned_cols=213  Identities=15%  Similarity=0.072  Sum_probs=141.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHH--cCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYAL--EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~--~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .+++++++||||||+|+||++++++|++  +|++|++++|+...........+.+.........++.++.+|+++.+++.
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            4578899999999999999999999999  89999999997542111100000000001113456789999999999888


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh--
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP--  192 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~--  192 (272)
                      ++      ...++|+||||||....       +.+++...+++|+.++.++++++...   +.+||++||.+.+....  
T Consensus        85 ~~------~~~~~D~vih~A~~~~~-------~~~~~~~~~~~Nv~gt~~ll~aa~~~---~~~~V~~SS~~vyg~~~~~  148 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSDT-------TMLNQELVMKTNYQAFLNLLEIARSK---KAKVIYASSAGVYGNTKAP  148 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCGG-------GCCCHHHHHHHHTHHHHHHHHHHHHT---TCEEEEEEEGGGGCSCCSS
T ss_pred             Hh------hccCCCEEEECCccCCc-------cccCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEeCcHHHhCCCCCC
Confidence            76      23589999999996421       33556888999999999999998642   45699999965433211  


Q ss_pred             ------------h------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-----CCHHHHHhhcc---------CCCCC
Q 039897          193 ------------E------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-----FSEEESAQFGS---------EVPMK  240 (272)
Q Consensus       193 ------------~------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~---------~~~~~  240 (272)
                                  .      +..+...+... +++..+.|+.+..+.....     ...........         .....
T Consensus       149 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (362)
T 3sxp_A          149 NVVGKNESPENVYGFSKLCMDEFVLSHSND-NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLR  227 (362)
T ss_dssp             BCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEE
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHhcc-CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEE
Confidence                        1      33444445444 8889999988877654221     11111111111         11223


Q ss_pred             CCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          241 RAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .+.+++|+|+++++++..+    .+| ++++
T Consensus       228 ~~i~v~Dva~ai~~~~~~~----~~g-~~~i  253 (362)
T 3sxp_A          228 DFVYIEDVIQANVKAMKAQ----KSG-VYNV  253 (362)
T ss_dssp             ECEEHHHHHHHHHHHTTCS----SCE-EEEE
T ss_pred             ccEEHHHHHHHHHHHHhcC----CCC-EEEe
Confidence            3567899999999998765    256 6665

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=1.6e-20  Score=154.70  Aligned_cols=192  Identities=10%  Similarity=0.044  Sum_probs=135.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||+|+||++++++|+++|++|++++|+......              ...++.++.+|++|.+++.++++    
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~~~~~~~Dl~d~~~~~~~~~----   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--------------ENEHLKVKKADVSSLDEVCEVCK----   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC--------------CCTTEEEECCCTTCHHHHHHHHT----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh--------------ccCceEEEEecCCCHHHHHHHhc----
Confidence            689999999999999999999999999999998554321              23578899999999998888775    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                         ++|+||||||.....           ...+++|+.++.++++++...  ..++||++||.....+.+.         
T Consensus        67 ---~~d~vi~~a~~~~~~-----------~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  130 (227)
T 3dhn_A           67 ---GADAVISAFNPGWNN-----------PDIYDETIKVYLTIIDGVKKA--GVNRFLMVGGAGSLFIAPGLRLMDSGEV  130 (227)
T ss_dssp             ---TCSEEEECCCC-----------------CCSHHHHHHHHHHHHHHHT--TCSEEEEECCSTTSEEETTEEGGGTTCS
T ss_pred             ---CCCEEEEeCcCCCCC-----------hhHHHHHHHHHHHHHHHHHHh--CCCEEEEeCChhhccCCCCCccccCCcc
Confidence               699999999874211           126788999999999988764  2359999999876543311         


Q ss_pred             -------HHH----HHHHHh-hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 -------ARG----LALQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 -------~~~----la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                             ++.    +...+. ..|++++.+.||.+.++......-...............+.+++|+|+++++++..+  
T Consensus       131 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~--  208 (227)
T 3dhn_A          131 PENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHP--  208 (227)
T ss_dssp             CGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSC--
T ss_pred             hHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCc--
Confidence                   233    333455 579999999999998775422111000000000001133568999999999999866  


Q ss_pred             Ccccceeecc
Q 039897          262 SYITGQVLHP  271 (272)
Q Consensus       262 ~~~tG~~i~i  271 (272)
                       ...|+.+++
T Consensus       209 -~~~g~~~~~  217 (227)
T 3dhn_A          209 -KHHQERFTI  217 (227)
T ss_dssp             -CCCSEEEEE
T ss_pred             -cccCcEEEE
Confidence             466888764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.84  E-value=1.5e-19  Score=146.36  Aligned_cols=189  Identities=13%  Similarity=0.083  Sum_probs=135.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++++++||||+|+||++++++|+++|++|++++|+.......             ...++.++.+|+++++++.++++  
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~~~D~~~~~~~~~~~~--   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------------GPRPAHVVVGDVLQAADVDKTVA--   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------------SCCCSEEEESCTTSHHHHHHHHT--
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------------cCCceEEEEecCCCHHHHHHHHc--
Confidence            347999999999999999999999999999999985442110             14578899999999988887764  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----h---
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----E---  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----~---  193 (272)
                           ++|+||||+|.....    +.        .++|+.++.++++++...  ..++||++||...+...+    .   
T Consensus        67 -----~~d~vi~~a~~~~~~----~~--------~~~n~~~~~~~~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~  127 (206)
T 1hdo_A           67 -----GQDAVIVLLGTRNDL----SP--------TTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQA  127 (206)
T ss_dssp             -----TCSEEEECCCCTTCC----SC--------CCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHH
T ss_pred             -----CCCEEEECccCCCCC----Cc--------cchHHHHHHHHHHHHHHh--CCCeEEEEeeeeeccCcccccccchh
Confidence                 589999999975321    11        137888999998888653  236999999986554432    1   


Q ss_pred             ---HHHHHHHH-hhCCeEEEEEecccc-cCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccccee
Q 039897          194 ---ARGLALQL-VERGIRVNGVAPGPI-WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV  268 (272)
Q Consensus       194 ---~~~la~e~-~~~gi~vn~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~  268 (272)
                         .+....++ ...+++++.+.||.+ .++.... +..    .+ ...+.+.+.+++|+|++++++++.+   ..+|++
T Consensus       128 y~~~K~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~-~~~----~~-~~~~~~~~i~~~Dva~~~~~~~~~~---~~~g~~  198 (206)
T 1hdo_A          128 VTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGA-YTV----TL-DGRGPSRVISKHDLGHFMLRCLTTD---EYDGHS  198 (206)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEEECCSEEECCCCCSC-CEE----ES-SSCSSCSEEEHHHHHHHHHHTTSCS---TTTTCE
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEeCCcccCCCCCcc-eEe----cc-cCCCCCCccCHHHHHHHHHHHhcCc---cccccc
Confidence               33333332 357899999999998 3433211 100    01 1122246778999999999999765   368999


Q ss_pred             eccC
Q 039897          269 LHPN  272 (272)
Q Consensus       269 i~id  272 (272)
                      ++++
T Consensus       199 ~~i~  202 (206)
T 1hdo_A          199 TYPS  202 (206)
T ss_dssp             EEEE
T ss_pred             eeee
Confidence            8864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.83  E-value=2.1e-20  Score=168.47  Aligned_cols=211  Identities=12%  Similarity=0.011  Sum_probs=144.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHh-----hhcCCCCceEEeccCCChHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA-----KTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~D~~~~~~  112 (272)
                      ....+++||||||+|+||++++++|++.|++|++++|+......+....+.+...     ......++.++.+|++++++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            3466789999999999999999999999999999999877444444433333221     01124678999999999887


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC--
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH--  190 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~--  190 (272)
                      +.        ..+++|+||||||...        ..+++...+++|+.++.++++++.+   ...+||++||... ..  
T Consensus       145 l~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~-G~~~  204 (427)
T 4f6c_A          145 VV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTYF  204 (427)
T ss_dssp             CC--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGG-GSEE
T ss_pred             CC--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHh-CCCc
Confidence            77        4578999999999853        1246788899999999999999987   4569999999776 11  


Q ss_pred             --------------------Ch-h------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH--------HHHHhhcc
Q 039897          191 --------------------SP-E------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQFGS  235 (272)
Q Consensus       191 --------------------~~-~------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~--------~~~~~~~~  235 (272)
                                          .. .      +..+..++++.|++++.+.||.|.++........        ........
T Consensus       205 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  284 (427)
T 4f6c_A          205 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ  284 (427)
T ss_dssp             CSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHH
T ss_pred             cCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHh
Confidence                                00 1      3444555666899999999999988765433211        11111111


Q ss_pred             --CC------CCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          236 --EV------PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       236 --~~------~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                        ..      ....+.+.+|+|+++++++... .   .|++++++
T Consensus       285 ~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~-~---~g~~~~l~  325 (427)
T 4f6c_A          285 LDCIGVSMAEMPVDFSFVDTTARQIVALAQVN-T---PQIIYHVL  325 (427)
T ss_dssp             SSEEEHHHHTCEECCEEHHHHHHHHHHHTTSC-C---CCSEEEES
T ss_pred             cCCCCCccccceEEEeeHHHHHHHHHHHHcCC-C---CCCEEEec
Confidence              11      1223567899999999998765 2   68888763

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.83  E-value=2.4e-20  Score=164.08  Aligned_cols=206  Identities=13%  Similarity=0.042  Sum_probs=143.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccc--hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQ--EEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +||||||+|+||++++++|+++ |++|++++|+..  ..+.+.+    +.     ...++.++.+|+++.+++.+++++ 
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~----~~-----~~~~~~~~~~Dl~d~~~~~~~~~~-   71 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD----IS-----ESNRYNFEHADICDSAEITRIFEQ-   71 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT----TT-----TCTTEEEEECCTTCHHHHHHHHHH-
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh----hh-----cCCCeEEEECCCCCHHHHHHHHhh-
Confidence            5999999999999999999998 799999998642  2222111    10     245688899999999999888875 


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-------CCeEEEecCCCCccCC--
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-------GSAIINTTSVEPLWHS--  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-------~g~iv~vsS~~~~~~~--  191 (272)
                          +++|+||||||....     +.+.++++..+++|+.++.++++++.+.|+.       +++||++||.+.+...  
T Consensus        72 ----~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~  142 (361)
T 1kew_A           72 ----YQPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPH  142 (361)
T ss_dssp             ----HCCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCC
T ss_pred             ----cCCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcc
Confidence                279999999997431     2345667889999999999999999998643       2599999996533211  


Q ss_pred             --------------------hh-----H----HHHHHHHhh-CCeEEEEEecccccCCCCCCC-CCHHHHHhhcc-----
Q 039897          192 --------------------PE-----A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGS-----  235 (272)
Q Consensus       192 --------------------~~-----~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~-----  235 (272)
                                          +.     +    ..+...++. .|++++.+.||.+.++..... ...........     
T Consensus       143 ~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  222 (361)
T 1kew_A          143 PDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP  222 (361)
T ss_dssp             GGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEE
T ss_pred             cccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCce
Confidence                                11     2    223333332 389999999999999875321 11111111111     


Q ss_pred             ----CCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          236 ----EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       236 ----~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                          ..+...+.+++|+|++++++++..    .+|++++++
T Consensus       223 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~  259 (361)
T 1kew_A          223 IYGKGDQIRDWLYVEDHARALHMVVTEG----KAGETYNIG  259 (361)
T ss_dssp             EETTSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEEC
T ss_pred             EcCCCceeEeeEEHHHHHHHHHHHHhCC----CCCCEEEec
Confidence                112234668999999999998754    468888763

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.83  E-value=3.5e-20  Score=152.09  Aligned_cols=180  Identities=12%  Similarity=0.155  Sum_probs=137.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~  122 (272)
                      +||||||+|+||++++++|+++|++|++++|+......               ..++.++.+|+++ .+++.++++    
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------------~~~~~~~~~D~~d~~~~~~~~~~----   62 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------------YNNVKAVHFDVDWTPEEMAKQLH----   62 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------------CTTEEEEECCTTSCHHHHHTTTT----
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------------cCCceEEEecccCCHHHHHHHHc----
Confidence            69999999999999999999999999999998544221               2568899999999 887777664    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                         ++|+||||||....             ..+++|+.++.++++++...  ..++||++||..+....+.         
T Consensus        63 ---~~d~vi~~ag~~~~-------------~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~e~~~~~~~  124 (219)
T 3dqp_A           63 ---GMDAIINVSGSGGK-------------SLLKVDLYGAVKLMQAAEKA--EVKRFILLSTIFSLQPEKWIGAGFDALK  124 (219)
T ss_dssp             ---TCSEEEECCCCTTS-------------SCCCCCCHHHHHHHHHHHHT--TCCEEEEECCTTTTCGGGCCSHHHHHTH
T ss_pred             ---CCCEEEECCcCCCC-------------CcEeEeHHHHHHHHHHHHHh--CCCEEEEECcccccCCCccccccccccc
Confidence               69999999998541             15789999999999988643  2369999999877654221         


Q ss_pred             ----HHHHHHHHh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccce
Q 039897          194 ----ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQ  267 (272)
Q Consensus       194 ----~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~  267 (272)
                          +|..+.++.  ..|++++.+.||.+.++.......        .......+.+++|+|+++++++..+   ...|+
T Consensus       125 ~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~~~~~~~--------~~~~~~~~i~~~Dva~~i~~~l~~~---~~~g~  193 (219)
T 3dqp_A          125 DYYIAKHFADLYLTKETNLDYTIIQPGALTEEEATGLID--------INDEVSASNTIGDVADTIKELVMTD---HSIGK  193 (219)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEEEEECSEECSCCCSEEE--------ESSSCCCCEEHHHHHHHHHHHHTCG---GGTTE
T ss_pred             HHHHHHHHHHHHHHhccCCcEEEEeCceEecCCCCCccc--------cCCCcCCcccHHHHHHHHHHHHhCc---cccCc
Confidence                455555554  679999999999998875432111        1134456778999999999999865   35588


Q ss_pred             eecc
Q 039897          268 VLHP  271 (272)
Q Consensus       268 ~i~i  271 (272)
                      ++++
T Consensus       194 ~~~i  197 (219)
T 3dqp_A          194 VISM  197 (219)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            8876

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.83  E-value=2.2e-20  Score=196.89  Aligned_cols=171  Identities=16%  Similarity=0.136  Sum_probs=133.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+....+...+.++++..    .+.++.++.+|+++.+++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----~g~~v~~~~~Dvsd~~~v~~~~~~ 1958 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR----QGVQVLVSTSNASSLDGARSLITE 1958 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH----TTCEEEEECCCSSSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh----CCCEEEEEecCCCCHHHHHHHHHH
Confidence            6899999999999999999999999997 88888886655555555555543    466788999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~------  193 (272)
                      +. .++++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.+.+.|++.++||++||.++..+.++      
T Consensus      1959 ~~-~~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~a 2036 (2512)
T 2vz8_A         1959 AT-QLGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGF 2036 (2512)
T ss_dssp             HH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHH
T ss_pred             HH-hcCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHH
Confidence            87 4799999999999854 468899999999999999999999999999999887799999999988776654      


Q ss_pred             ----HHHHHHHHhhCCeEEEEEeccccc
Q 039897          194 ----ARGLALQLVERGIRVNGVAPGPIW  217 (272)
Q Consensus       194 ----~~~la~e~~~~gi~vn~i~PG~v~  217 (272)
                          ...+++.....|+...++..|.+.
T Consensus      2037 aKaal~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2037 ANSAMERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHHTTSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHHCCCcEEEEEccCcC
Confidence                456777777789999999988774

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.83  E-value=5.4e-21  Score=166.90  Aligned_cols=200  Identities=18%  Similarity=0.076  Sum_probs=132.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|+||||||+|+||++++++|+++|++|++++|+......  ..+..+   .  ...++.++.+|++|.+++.++++.
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~---~--~~~~~~~~~~Dl~d~~~~~~~~~~   73 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKEL---G--IENDVKIIHMDLLEFSNIIRTIEK   73 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHT---T--CTTTEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhc---c--ccCceeEEECCCCCHHHHHHHHHh
Confidence            467899999999999999999999999999999998654321  111111   0  234678899999999999988876


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC---------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH---------  190 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~---------  190 (272)
                      +     ++|+||||||....     +.+.+++...+++|+.++.++++++... ...++||++||.+.+..         
T Consensus        74 ~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~e~  142 (345)
T 2z1m_A           74 V-----QPDEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQEIPQTEK  142 (345)
T ss_dssp             H-----CCSEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             c-----CCCEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCCCCCCcc
Confidence            5     69999999997421     1234567889999999999999999853 22379999999754321         


Q ss_pred             ---Ch---h----------HHHHHHHHh---hCCeEEEEEecccccCCCCCCCCCHHHHHhh--c-------cC-CCCCC
Q 039897          191 ---SP---E----------ARGLALQLV---ERGIRVNGVAPGPIWTPLIPSSFSEEESAQF--G-------SE-VPMKR  241 (272)
Q Consensus       191 ---~~---~----------~~~la~e~~---~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~--~-------~~-~~~~~  241 (272)
                         .+   .          ++.++.++.   ..++.+|.+.||...+.+... . .......  .       .. .....
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~  220 (345)
T 2z1m_A          143 TPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRK-I-TYSLARIKYGLQDKLVLGNLNAKRD  220 (345)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHH-H-HHHHHHHHTTSCSCEEESCTTCEEC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHH-H-HHHHHHHHcCCCCeeeeCCCCceee
Confidence               00   1          233333332   123455667777665543110 0 0001000  0       01 11123


Q ss_pred             CCCccchhhhhhhhhccC
Q 039897          242 AGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~  259 (272)
                      +.+++|+|++++++++..
T Consensus       221 ~~~v~Dva~a~~~~~~~~  238 (345)
T 2z1m_A          221 WGYAPEYVEAMWLMMQQP  238 (345)
T ss_dssp             CEEHHHHHHHHHHHHTSS
T ss_pred             eEEHHHHHHHHHHHHhCC
Confidence            678999999999999764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.83  E-value=6.1e-20  Score=160.12  Aligned_cols=201  Identities=16%  Similarity=0.127  Sum_probs=135.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +++|+||||||+|+||++++++|+++|++|+++.|+...........+ +..    ...++.++.+|+++.+++.++++ 
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~Dl~d~~~~~~~~~-   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-LPK----AETHLTLWKADLADEGSFDEAIK-   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-STT----HHHHEEEEECCTTSTTTTHHHHT-
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-ccc----CCCeEEEEEcCCCCHHHHHHHHc-
Confidence            367899999999999999999999999999999887543322221110 000    01246788999999988887764 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--------  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--------  191 (272)
                            ++|+|||+|+...    ...  .+.....+++|+.++.++++++.+.. ..++||++||.+++++.        
T Consensus        77 ------~~d~Vih~A~~~~----~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~~~~~~~~  143 (337)
T 2c29_D           77 ------GCTGVFHVATPMD----FES--KDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQEHQLPVYD  143 (337)
T ss_dssp             ------TCSEEEECCCCCC----SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSSSCCSEEC
T ss_pred             ------CCCEEEEeccccC----CCC--CChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCCCCCcccC
Confidence                  5899999998631    111  12335689999999999999998754 13699999997643211        


Q ss_pred             ---------------h---h------HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCCHHHHHh---h-cc-----CC
Q 039897          192 ---------------P---E------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEESAQ---F-GS-----EV  237 (272)
Q Consensus       192 ---------------~---~------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~---~-~~-----~~  237 (272)
                                     +   .      +..++.++. .+|++++.+.|+.+.++.............   . ..     ..
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~  223 (337)
T 2c29_D          144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII  223 (337)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHH
T ss_pred             cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccccc
Confidence                           1   1      233444444 368999999999999987543333221111   0 00     11


Q ss_pred             CCCCCCCccchhhhhhhhhccC
Q 039897          238 PMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       238 ~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      +..++.+++|+|++++++++..
T Consensus       224 ~~~~~i~v~Dva~a~~~~~~~~  245 (337)
T 2c29_D          224 RQGQFVHLDDLCNAHIYLFENP  245 (337)
T ss_dssp             TEEEEEEHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEHHHHHHHHHHHhcCc
Confidence            2234789999999999998653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.83  E-value=8.1e-20  Score=158.09  Aligned_cols=204  Identities=16%  Similarity=0.128  Sum_probs=133.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYV-KSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ||+||||||+|+||++++++|+++|++|+++.| +.......... ..+..    ...++.++.+|+++.+++.++++  
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~--   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPG----ASEKLHFFNADLSNPDSFAAAIE--   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTT----HHHHEEECCCCTTCGGGGHHHHT--
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-Hhhhc----cCCceEEEecCCCCHHHHHHHHc--
Confidence            689999999999999999999999999999888 53221111111 10000    01245678899999998888775  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---------  191 (272)
                           ++|+|||+|+..    ..  ...+.++..+++|+.+++++++++.+.+ ..++||++||.++..+.         
T Consensus        74 -----~~d~vih~A~~~----~~--~~~~~~~~~~~~nv~gt~~l~~aa~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 -----GCVGIFHTASPI----DF--AVSEPEEIVTKRTVDGALGILKACVNSK-TVKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             -----TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             -----CCCEEEEcCCcc----cC--CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccHHHcccCCCCCeecCC
Confidence                 589999999642    11  1112245689999999999999998752 24699999997633210         


Q ss_pred             -----------------hh------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHh---h-cc--CCCCC-
Q 039897          192 -----------------PE------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQ---F-GS--EVPMK-  240 (272)
Q Consensus       192 -----------------~~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~---~-~~--~~~~~-  240 (272)
                                       +.      ++.++.++.+ +|++++.+.||.+.+++............   . ..  ..+.. 
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  221 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTR  221 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEE
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCC
Confidence                             11      2444555554 69999999999999987543332211110   1 11  11111 


Q ss_pred             -CCCCccchhhhhhhhhccCCCCcccce
Q 039897          241 -RAGQPIEVAPCYVFLACNHCSSYITGQ  267 (272)
Q Consensus       241 -~~~~~~dva~~~~~L~s~~~~~~~tG~  267 (272)
                       .+.+++|+|++++++++..   ..+|+
T Consensus       222 ~~~i~v~Dva~a~~~~~~~~---~~~g~  246 (322)
T 2p4h_X          222 FHMVHVDDVARAHIYLLENS---VPGGR  246 (322)
T ss_dssp             EEEEEHHHHHHHHHHHHHSC---CCCEE
T ss_pred             cCEEEHHHHHHHHHHHhhCc---CCCCC
Confidence             3678999999999998654   24565

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.82  E-value=1.4e-19  Score=157.84  Aligned_cols=196  Identities=12%  Similarity=0.048  Sum_probs=133.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||+|+||++++++|+++|++|++++|+......+             ...++.++.+|+++.+++.++++    
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-------------~~~~~~~~~~Dl~d~~~~~~~~~----   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-------------AYLEPECRVAEMLDHAGLERALR----   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-------------GGGCCEEEECCTTCHHHHHHHTT----
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-------------ccCCeEEEEecCCCHHHHHHHHc----
Confidence            3899999999999999999999999999999986543221             11257889999999988877764    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----------  191 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  191 (272)
                         ++|+|||+||...       ...+++...+++|+.++.++++++.+.  ..++||++||.+.+...           
T Consensus        77 ---~~d~vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~E~~~  144 (342)
T 2x4g_A           77 ---GLDGVIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRHPQGLPGHEGLF  144 (342)
T ss_dssp             ---TCSEEEEC-------------------CHHHHHHHHHHHHHHHHHHH--TCSCEEEECCGGGSCCCTTSSCBCTTCC
T ss_pred             ---CCCEEEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHhhCcCCCCCCCCCCCC
Confidence               6999999999742       234567888999999999999999874  23699999998654321           


Q ss_pred             ---------hh--H----HHHHHHHhhCCeEEEEEecccccCCCC-CCCCCHHHHHhhccCC------CCCCCCCccchh
Q 039897          192 ---------PE--A----RGLALQLVERGIRVNGVAPGPIWTPLI-PSSFSEEESAQFGSEV------PMKRAGQPIEVA  249 (272)
Q Consensus       192 ---------~~--~----~~la~e~~~~gi~vn~i~PG~v~t~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~dva  249 (272)
                               +.  +    ..+..+++..|++++.+.||.+.++.. ..... ..........      ....+.+++|+|
T Consensus       145 ~~p~~~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~Dva  223 (342)
T 2x4g_A          145 YDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTG-RVITAIGNGEMTHYVAGQRNVIDAAEAG  223 (342)
T ss_dssp             CSSCCTTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTT-HHHHHHHTTCCCEEECCEEEEEEHHHHH
T ss_pred             CCccccccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHH-HHHHHHHcCCCccccCCCcceeeHHHHH
Confidence                     11  2    233334433499999999999998865 21122 2222221111      112256889999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++++++.. .   .|+++++.
T Consensus       224 ~~~~~~~~~~-~---~g~~~~v~  242 (342)
T 2x4g_A          224 RGLLMALERG-R---IGERYLLT  242 (342)
T ss_dssp             HHHHHHHHHS-C---TTCEEEEC
T ss_pred             HHHHHHHhCC-C---CCceEEEc
Confidence            9999999765 2   27777763

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.82  E-value=1.2e-19  Score=158.80  Aligned_cols=210  Identities=13%  Similarity=0.041  Sum_probs=138.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccch--hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQE--EKDAQETLEILREAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      .+.+++++||||||+|+||.+++++|+++|  ++|+..+|....  ...+..    +     ....++.++.+|+++.++
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~----~-----~~~~~~~~~~~Dl~d~~~   89 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKS----I-----QDHPNYYFVKGEIQNGEL   89 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTT----T-----TTCTTEEEEECCTTCHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhh----h-----ccCCCeEEEEcCCCCHHH
Confidence            456888999999999999999999999999  677777765321  111110    0     023578899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      +.++++..     ++|+|||+|+.....     ...+++...+++|+.++.++++++...  ..++||++||.+.+...+
T Consensus        90 ~~~~~~~~-----~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vy~~~~  157 (346)
T 4egb_A           90 LEHVIKER-----DVQVIVNFAAESHVD-----RSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEVYGSLG  157 (346)
T ss_dssp             HHHHHHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGGGCCCC
T ss_pred             HHHHHhhc-----CCCEEEECCcccchh-----hhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHHhCCCC
Confidence            99988753     699999999985321     245667889999999999999998765  235899999975544321


Q ss_pred             ----------------h------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCC-CHHHHHhhccCC---------CC
Q 039897          193 ----------------E------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEV---------PM  239 (272)
Q Consensus       193 ----------------~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~---------~~  239 (272)
                                      .      +..+..++.+ .|++++.+.|+.+.++...... ............         ..
T Consensus       158 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
T 4egb_A          158 KTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNV  237 (346)
T ss_dssp             SSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCE
T ss_pred             cCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeE
Confidence                            1      2233334433 4899999999999887643211 112222221111         11


Q ss_pred             CCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          240 KRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ..+.+.+|+|+++++++... .   .|+++++
T Consensus       238 ~~~i~v~Dva~a~~~~~~~~-~---~g~~~~i  265 (346)
T 4egb_A          238 RDWLHVTDHCSAIDVVLHKG-R---VGEVYNI  265 (346)
T ss_dssp             ECEEEHHHHHHHHHHHHHHC-C---TTCEEEE
T ss_pred             EeeEEHHHHHHHHHHHHhcC-C---CCCEEEE
Confidence            23346889999999999765 2   6777765

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.82  E-value=2.5e-19  Score=157.25  Aligned_cols=215  Identities=13%  Similarity=0.028  Sum_probs=146.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh-hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE-KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+++++||||||+|+||++++++|+++|++|++++|+.... +.+....+.+...   ...++.++.+|+++.+++.++
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~   99 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK---QWSNFKFIQGDIRNLDDCNNA   99 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH---HHTTEEEEECCTTSHHHHHHH
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc---cCCceEEEECCCCCHHHHHHH
Confidence            347789999999999999999999999999999999975422 2222222111100   124678899999999888877


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----  192 (272)
                      ++       ++|+|||+||.....     .+.+++...+++|+.++.++++++.+.  ..++||++||...+...+    
T Consensus       100 ~~-------~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~  165 (352)
T 1sb8_A          100 CA-------GVDYVLHQAALGSVP-----RSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLPK  165 (352)
T ss_dssp             HT-------TCSEEEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSSB
T ss_pred             hc-------CCCEEEECCcccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCCCCCCC
Confidence            65       799999999974311     244667889999999999999999764  336899999976543321    


Q ss_pred             -----------h--HHH----HHHHHh-hCCeEEEEEecccccCCCCCCC--C---CHHHHHhhccCC---------CCC
Q 039897          193 -----------E--ARG----LALQLV-ERGIRVNGVAPGPIWTPLIPSS--F---SEEESAQFGSEV---------PMK  240 (272)
Q Consensus       193 -----------~--~~~----la~e~~-~~gi~vn~i~PG~v~t~~~~~~--~---~~~~~~~~~~~~---------~~~  240 (272)
                                 .  ++.    +...++ ..|++++.+.||.+.++.....  .   ............         ...
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  245 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSR  245 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceE
Confidence                       1  222    223332 2489999999999998875322  1   111111111111         122


Q ss_pred             CCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          241 RAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .+.+++|+|+++++++...  ....|+++++
T Consensus       246 ~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni  274 (352)
T 1sb8_A          246 DFCYIENTVQANLLAATAG--LDARNQVYNI  274 (352)
T ss_dssp             CCEEHHHHHHHHHHHHTCC--GGGCSEEEEE
T ss_pred             eeEEHHHHHHHHHHHHhcc--ccCCCceEEe
Confidence            4568899999999888642  2456787775

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.81  E-value=5.3e-19  Score=144.75  Aligned_cols=186  Identities=10%  Similarity=-0.022  Sum_probs=119.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|+||++++++|+++|++|++++|+......+             . .++.++.+|++|.++         +.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~-~~~~~~~~D~~d~~~---------~~   58 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------------H-KDINILQKDIFDLTL---------SD   58 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------------C-SSSEEEECCGGGCCH---------HH
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------------c-CCCeEEeccccChhh---------hh
Confidence            699999999999999999999999999999985432211             2 568899999999887         22


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  193 (272)
                      ++++|+||||||....              ...+|+.++.++++++...  ..+++|++||..++++.+.          
T Consensus        59 ~~~~d~vi~~ag~~~~--------------~~~~~~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  122 (221)
T 3ew7_A           59 LSDQNVVVDAYGISPD--------------EAEKHVTSLDHLISVLNGT--VSPRLLVVGGAASLQIDEDGNTLLESKGL  122 (221)
T ss_dssp             HTTCSEEEECCCSSTT--------------TTTSHHHHHHHHHHHHCSC--CSSEEEEECCCC-----------------
T ss_pred             hcCCCEEEECCcCCcc--------------ccchHHHHHHHHHHHHHhc--CCceEEEEecceEEEcCCCCccccccCCC
Confidence            3579999999998421              1344666666666655331  2479999999876443221          


Q ss_pred             --------HHHHHHH---Hh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 --------ARGLALQ---LV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 --------~~~la~e---~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                              ++..+..   +.  ..|++++.|.||.+.++......-...............+.+++|+|++++.++..+ 
T Consensus       123 ~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-  201 (221)
T 3ew7_A          123 REAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERP-  201 (221)
T ss_dssp             --CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCc-
Confidence                    3333222   33  679999999999998762111000000000000111224678999999999999865 


Q ss_pred             CCcccceeecc
Q 039897          261 SSYITGQVLHP  271 (272)
Q Consensus       261 ~~~~tG~~i~i  271 (272)
                        ...|+.+++
T Consensus       202 --~~~g~~~~~  210 (221)
T 3ew7_A          202 --NHLNEHFTV  210 (221)
T ss_dssp             --SCTTSEEEC
T ss_pred             --cccCCEEEE
Confidence              355787765

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.81  E-value=2.6e-19  Score=147.10  Aligned_cols=187  Identities=10%  Similarity=-0.017  Sum_probs=125.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|+||++++++|+++|++|++++|+......       +      ...++.++.+|+++.++         +.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~------~~~~~~~~~~D~~d~~~---------~~   59 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD-------R------LGATVATLVKEPLVLTE---------AD   59 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------H------TCTTSEEEECCGGGCCH---------HH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc-------c------cCCCceEEecccccccH---------hh
Confidence            59999999999999999999999999999997433221       1      34578999999999887         22


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-----------  192 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-----------  192 (272)
                      ++++|+||||||..... .           ...+|+.++.++++++..   .++++|++||..+.+..+           
T Consensus        60 ~~~~d~vi~~ag~~~~~-~-----------~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  124 (224)
T 3h2s_A           60 LDSVDAVVDALSVPWGS-G-----------RGYLHLDFATHLVSLLRN---SDTLAVFILGSASLAMPGADHPMILDFPE  124 (224)
T ss_dssp             HTTCSEEEECCCCCTTS-S-----------CTHHHHHHHHHHHHTCTT---CCCEEEEECCGGGSBCTTCSSCGGGGCCG
T ss_pred             cccCCEEEECCccCCCc-c-----------hhhHHHHHHHHHHHHHHH---cCCcEEEEecceeeccCCCCccccccCCC
Confidence            35799999999985211 0           024577776666555432   247999999875543211           


Q ss_pred             -------h--HHHHHHH---H-hhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          193 -------E--ARGLALQ---L-VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       193 -------~--~~~la~e---~-~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                             .  ++..+..   + ...|++++.+.||.+.++.....+. .....+........+.+++|+|+++++++..+
T Consensus       125 ~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~  203 (224)
T 3h2s_A          125 SAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYV-AGKDTLLVGEDGQSHITTGNMALAILDQLEHP  203 (224)
T ss_dssp             GGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCCCCCEE-EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSC
T ss_pred             CCccchhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccCCCcccCce-ecccccccCCCCCceEeHHHHHHHHHHHhcCc
Confidence                   0  3333322   2 3679999999999998873222110 00000111112245678999999999999865


Q ss_pred             CCCcccceeecc
Q 039897          260 CSSYITGQVLHP  271 (272)
Q Consensus       260 ~~~~~tG~~i~i  271 (272)
                         ...|+++++
T Consensus       204 ---~~~g~~~~~  212 (224)
T 3h2s_A          204 ---TAIRDRIVV  212 (224)
T ss_dssp             ---CCTTSEEEE
T ss_pred             ---cccCCEEEE
Confidence               355777764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.81  E-value=5.2e-19  Score=154.13  Aligned_cols=205  Identities=12%  Similarity=0.019  Sum_probs=136.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ...+++++||||||+|+||++++++|+++|++|++++|+.......      +.     .-.++.++.+|+++.+++.++
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------l~-----~~~~~~~~~~Dl~d~~~~~~~   84 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH------LK-----DHPNLTFVEGSIADHALVNQL   84 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG------SC-----CCTTEEEEECCTTCHHHHHHH
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh------Hh-----hcCCceEEEEeCCCHHHHHHH
Confidence            4557789999999999999999999999999999999975432110      00     114678899999999998888


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc----C--
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW----H--  190 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~----~--  190 (272)
                      ++.     +++|+||||||.... .     +.++++  +++|+.++.++++++.+.  ..++||++||.+.+.    .  
T Consensus        85 ~~~-----~~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~g~~~~~~~  149 (333)
T 2q1w_A           85 IGD-----LQPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKKN--NVGRFVYFQTALCYGVKPIQQP  149 (333)
T ss_dssp             HHH-----HCCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGCSCCCSSS
T ss_pred             Hhc-----cCCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCcccCC
Confidence            875     369999999998532 1     234444  999999999999999873  346999999976553    1  


Q ss_pred             -----------Chh--HHHHHHHHhhC-CeEEEEEecccccCCCCCCCCCHHHHHhh-cc-----CCCCCCCCCccchhh
Q 039897          191 -----------SPE--ARGLALQLVER-GIRVNGVAPGPIWTPLIPSSFSEEESAQF-GS-----EVPMKRAGQPIEVAP  250 (272)
Q Consensus       191 -----------~~~--~~~la~e~~~~-gi~vn~i~PG~v~t~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~dva~  250 (272)
                                 .+.  +|..+..+... -.++..+.|+.+..+.............. ..     ..+...+.+++|+|+
T Consensus       150 ~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  229 (333)
T 2q1w_A          150 VRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLAR  229 (333)
T ss_dssp             BCTTSCCCCTTCHHHHHHHHHHHHHHHHTCCEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHH
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHhhhCCeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHH
Confidence                       111  34444333322 11677888888776652111111111111 11     122345678999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++++++.. .    |++++++
T Consensus       230 ai~~~~~~~-~----g~~~~v~  246 (333)
T 2q1w_A          230 ATVRAVDGV-G----HGAYHFS  246 (333)
T ss_dssp             HHHHHHTTC-C----CEEEECS
T ss_pred             HHHHHHhcC-C----CCEEEeC
Confidence            999999765 2    7787763

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.80  E-value=2.1e-19  Score=157.26  Aligned_cols=149  Identities=13%  Similarity=0.049  Sum_probs=109.2

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           34 YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        34 ~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      .....++++|+||||||+|+||.+++++|+++|++|++++|+...                   .++.++.+|+++.+++
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------------~~~~~~~~Dl~d~~~~   71 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------------TGGEEVVGSLEDGQAL   71 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------------SCCSEEESCTTCHHHH
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------------CCccEEecCcCCHHHH
Confidence            344677999999999999999999999999999999999997432                   4578899999999988


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--  191 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--  191 (272)
                      .++++       ++|+|||+|+....       +...+...+++|+.++.++++++...  ..++||++||...+...  
T Consensus        72 ~~~~~-------~~d~vih~A~~~~~-------~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~V~~SS~~vyg~~~~  135 (347)
T 4id9_A           72 SDAIM-------GVSAVLHLGAFMSW-------APADRDRMFAVNVEGTRRLLDAASAA--GVRRFVFASSGEVYPENRP  135 (347)
T ss_dssp             HHHHT-------TCSEEEECCCCCCS-------SGGGHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGTTTTSC
T ss_pred             HHHHh-------CCCEEEECCcccCc-------chhhHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHHhCCCCC
Confidence            87775       79999999997432       23345889999999999999998763  23599999996554331  


Q ss_pred             ------------h---h--HHHH----HHHHh-hCCeEEEEEeccccc
Q 039897          192 ------------P---E--ARGL----ALQLV-ERGIRVNGVAPGPIW  217 (272)
Q Consensus       192 ------------~---~--~~~l----a~e~~-~~gi~vn~i~PG~v~  217 (272)
                                  +   .  ++..    ...+. ..|++++.+.|+.+.
T Consensus       136 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          136 EFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQ  183 (347)
T ss_dssp             SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred             CCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEe
Confidence                        0   0  3333    33332 358999999999987

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.80  E-value=1.5e-18  Score=154.86  Aligned_cols=220  Identities=13%  Similarity=0.089  Sum_probs=142.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhh-------------HHHHHHHHHHhhhcCCCCceEEe
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD-------------AQETLEILREAKTSDAKDPMAIS  104 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~  104 (272)
                      ...++++||||||+|.||++++++|+++|++|++++|..+....             +.+.+..+...   ...++.++.
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~   83 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL---TGKSIELYV   83 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH---HCCCCEEEE
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc---cCCceEEEE
Confidence            34678899999999999999999999999999999886433211             01111111111   245688999


Q ss_pred             ccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       105 ~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                      +|+++.+++.++++..     ++|+||||||....  .....+.+.+...+++|+.++.++++++..... ..+||++||
T Consensus        84 ~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~~~~V~~SS  155 (404)
T 1i24_A           84 GDICDFEFLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGT  155 (404)
T ss_dssp             SCTTSHHHHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECC
T ss_pred             CCCCCHHHHHHHHhcc-----CCCEEEECCCCCCc--cchhhCccchhhhHHHHHHHHHHHHHHHHHhCC-CcEEEEeCc
Confidence            9999999998888754     69999999997432  112235677788999999999999999976421 249999999


Q ss_pred             CCCccCC----------------------h------h--HH----HHHHHHh-hCCeEEEEEecccccCCCCCC------
Q 039897          185 VEPLWHS----------------------P------E--AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPS------  223 (272)
Q Consensus       185 ~~~~~~~----------------------~------~--~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~------  223 (272)
                      .+.+...                      +      .  +|    .+..+++ ..|++++++.||.|.++....      
T Consensus       156 ~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~  235 (404)
T 1i24_A          156 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEE  235 (404)
T ss_dssp             GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGG
T ss_pred             HHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccc
Confidence            7543210                      1      1  22    2223332 238999999999998876421      


Q ss_pred             ------------CCCHHHHHhhcc---------CCCCCCCCCccchhhhhhhhhccCCCCcccc--eeecc
Q 039897          224 ------------SFSEEESAQFGS---------EVPMKRAGQPIEVAPCYVFLACNHCSSYITG--QVLHP  271 (272)
Q Consensus       224 ------------~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG--~~i~i  271 (272)
                                  ............         ......+.+.+|+|++++.++... .  ..|  +++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~-~--~~g~~~~yni  303 (404)
T 1i24_A          236 LRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANP-A--KAGEFRVFNQ  303 (404)
T ss_dssp             GCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSC-C--CTTCEEEEEE
T ss_pred             cccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCc-c--cCCCceEEEE
Confidence                        001111111111         111223467899999999998654 2  235  56654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.80  E-value=5.4e-19  Score=154.89  Aligned_cols=216  Identities=13%  Similarity=0.016  Sum_probs=146.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +.+++++||||||+|+||++++++|+++|++|++++|+..........+....  ......++.++.+|+++.+++.+++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~   98 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLV--STEQWSRFCFIEGDIRDLTTCEQVM   98 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTS--CHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhcc--ccccCCceEEEEccCCCHHHHHHHh
Confidence            45789999999999999999999999999999999997654333222221100  0000157889999999998888777


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-----  192 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-----  192 (272)
                      +       ++|+|||+||....     ....+++...+++|+.++.++++++...-  -++||++||.+.+....     
T Consensus        99 ~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~  164 (351)
T 3ruf_A           99 K-------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYGDHPALPKV  164 (351)
T ss_dssp             T-------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTCCCSSBC
T ss_pred             c-------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcCCCCCCCCc
Confidence            5       79999999997432     23445677889999999999999987642  35999999976553221     


Q ss_pred             ----------h--HH----HHHHHHhh-CCeEEEEEecccccCCCCCCC-----CCHHHHHhhcc---------CCCCCC
Q 039897          193 ----------E--AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSS-----FSEEESAQFGS---------EVPMKR  241 (272)
Q Consensus       193 ----------~--~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~---------~~~~~~  241 (272)
                                .  ++    .+..++.+ .|++++.+.|+.+..+.....     ...........         ......
T Consensus       165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  244 (351)
T 3ruf_A          165 EENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRD  244 (351)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEe
Confidence                      1  22    33333332 489999999999988764322     11111111111         112224


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +.+.+|+|++++.++...  ....|+++++
T Consensus       245 ~i~v~Dva~a~~~~~~~~--~~~~~~~~ni  272 (351)
T 3ruf_A          245 FCYIDNVIQMNILSALAK--DSAKDNIYNV  272 (351)
T ss_dssp             CEEHHHHHHHHHHHHTCC--GGGCSEEEEE
T ss_pred             eEEHHHHHHHHHHHHhhc--cccCCCEEEe
Confidence            567899999999988652  2456777765

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.80  E-value=4.9e-19  Score=154.90  Aligned_cols=201  Identities=12%  Similarity=0.084  Sum_probs=139.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccch--hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQE--EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++||||||+|+||++++++|+++  |++|++++|+...  .+.+.    .+      ...++.++.+|+++.+++.++++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~----~~------~~~~~~~~~~Dl~d~~~~~~~~~   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE----AI------LGDRVELVVGDIADAELVDKLAA   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG----GG------CSSSEEEEECCTTCHHHHHHHHT
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh----hh------ccCCeEEEECCCCCHHHHHHHhh
Confidence            68999999999999999999999  8999999986421  11111    00      23568889999999988887775


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-------
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-------  191 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-------  191 (272)
                             .+|+||||||....     +.+.++++..+++|+.++.++++++.+.   +++||++||.+.+...       
T Consensus        75 -------~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~v~~SS~~vyg~~~~~~~~~  139 (348)
T 1oc2_A           75 -------KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLREDLP  139 (348)
T ss_dssp             -------TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGGGST
T ss_pred             -------cCCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEecccceeCCCccccccc
Confidence                   46999999997431     2234566889999999999999999875   3499999997533211       


Q ss_pred             -----------------h---h--HH----HHHHHHhh-CCeEEEEEecccccCCCCCCC-CCHHHHHhhc---------
Q 039897          192 -----------------P---E--AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSS-FSEEESAQFG---------  234 (272)
Q Consensus       192 -----------------~---~--~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~---------  234 (272)
                                       +   .  +|    .+...+.. .|++++.+.||.+.++..... ..........         
T Consensus       140 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (348)
T 1oc2_A          140 GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYG  219 (348)
T ss_dssp             TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEET
T ss_pred             ccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEec
Confidence                             1   1  22    23333322 489999999999998875321 1111111111         


Q ss_pred             cCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       235 ~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ...+...+.+++|+|++++++++..    .+|++++++
T Consensus       220 ~~~~~~~~i~v~Dva~~~~~~~~~~----~~g~~~~i~  253 (348)
T 1oc2_A          220 EGKNVRDWIHTNDHSTGVWAILTKG----RMGETYLIG  253 (348)
T ss_dssp             TSCCEEECEEHHHHHHHHHHHHHHC----CTTCEEEEC
T ss_pred             CCCceEeeEEHHHHHHHHHHHhhCC----CCCCeEEeC
Confidence            1112235668899999999998754    368888763

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.80  E-value=1.9e-19  Score=155.20  Aligned_cols=200  Identities=13%  Similarity=0.010  Sum_probs=137.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||+|+||++++++|+++|++|++++|+.......             ...++.++.+|+++.+ +.+.++    
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~~~Dl~d~~-~~~~~~----   62 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------------VNPSAELHVRDLKDYS-WGAGIK----   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------------SCTTSEEECCCTTSTT-TTTTCC----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------------cCCCceEEECccccHH-HHhhcC----
Confidence            4799999999999999999999999999999876543221             2456889999999987 554443    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----------  192 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  192 (272)
                         . |+|||+|+....     ..+.+++...+++|+.++.++++++...  ..++||++||.+.+....          
T Consensus        63 ---~-d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~vyg~~~~~~~~e~~~~  131 (312)
T 3ko8_A           63 ---G-DVVFHFAANPEV-----RLSTTEPIVHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDADVIPTPEEEPY  131 (312)
T ss_dssp             ---C-SEEEECCSSCSS-----SGGGSCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             ---C-CEEEECCCCCCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeCcHHHhCCCCCCCCCCCCCC
Confidence               3 999999996321     2344566788999999999999998653  235999999976543211          


Q ss_pred             -----h--H----HHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHhhcc----------CCCCCCCCCccchhh
Q 039897          193 -----E--A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS----------EVPMKRAGQPIEVAP  250 (272)
Q Consensus       193 -----~--~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~dva~  250 (272)
                           .  +    ..+...++. .|++++.+.||.+.++................          ......+.+++|+|+
T Consensus       132 ~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  211 (312)
T 3ko8_A          132 KPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVE  211 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHH
Confidence                 1  2    223333332 38999999999999987543221222221111          112234567899999


Q ss_pred             hhhhhhccCCCCcccceeecc
Q 039897          251 CYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ++++++.........|+++++
T Consensus       212 a~~~~~~~~~~~~~~~~~~ni  232 (312)
T 3ko8_A          212 ATLAAWKKFEEMDAPFLALNV  232 (312)
T ss_dssp             HHHHHHHHHHHSCCSEEEEEE
T ss_pred             HHHHHHHhccccCCCCcEEEE
Confidence            999998761012345677665

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.79  E-value=1.4e-18  Score=151.98  Aligned_cols=160  Identities=11%  Similarity=0.013  Sum_probs=116.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch------hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE------EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +|+||||||+|+||++++++|+++|++|++++|+...      .....+.+..+      .+.++.++.+|+++.+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~   75 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL------TGRSVEFEEMDILDQGALQR   75 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH------HTCCCEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc------cCCceEEEECCCCCHHHHHH
Confidence            5799999999999999999999999999999886432      12222212111      24568899999999998888


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-----
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-----  190 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-----  190 (272)
                      +++..     ++|+||||||.....     ...+++...+++|+.++.++++++...  ..++||++||.+.+..     
T Consensus        76 ~~~~~-----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~  143 (348)
T 1ek6_A           76 LFKKY-----SFMAVIHFAGLKAVG-----ESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNPQYLP  143 (348)
T ss_dssp             HHHHC-----CEEEEEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSCSSSS
T ss_pred             HHHhc-----CCCEEEECCCCcCcc-----chhhchHHHHHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCCCCC
Confidence            87652     799999999974311     134567889999999999999987642  2369999999765431     


Q ss_pred             -------Ch----h------HHHHHHHHhhCC--eEEEEEecccccCC
Q 039897          191 -------SP----E------ARGLALQLVERG--IRVNGVAPGPIWTP  219 (272)
Q Consensus       191 -------~~----~------~~~la~e~~~~g--i~vn~i~PG~v~t~  219 (272)
                             .+    .      +..+...++..+  +++..+.|+.+..+
T Consensus       144 ~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          144 LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECC
T ss_pred             cCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCC
Confidence                   11    1      233334443324  99999999988766

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.79  E-value=7.9e-19  Score=155.10  Aligned_cols=206  Identities=14%  Similarity=0.088  Sum_probs=144.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCC-ChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLG-FDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~  115 (272)
                      ..|++++||||||+|.||++++++|+++ |++|++++|+......+.            ...++.++.+|++ +.+.+.+
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------~~~~v~~~~~Dl~~d~~~~~~   87 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV------------KHERMHFFEGDITINKEWVEY   87 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG------------GSTTEEEEECCTTTCHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc------------cCCCeEEEeCccCCCHHHHHH
Confidence            4477899999999999999999999999 999999999865433221            2357889999999 8888888


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-----
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-----  190 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-----  190 (272)
                      +++       ++|+|||+|+.....     ...++....+++|+.++.++++++...-   .++|++||.+.+..     
T Consensus        88 ~~~-------~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS~~vyg~~~~~~  152 (372)
T 3slg_A           88 HVK-------KCDVILPLVAIATPA-----TYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGMCADEQ  152 (372)
T ss_dssp             HHH-------HCSEEEECBCCCCHH-----HHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECCGGGGBSCCCSS
T ss_pred             Hhc-------cCCEEEEcCccccHH-----HHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCcHHHhCCCCCCC
Confidence            776       599999999985321     1234566788999999999999987642   69999999654322     


Q ss_pred             --------------Ch---h------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC------C---HHHHHhhcc---
Q 039897          191 --------------SP---E------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF------S---EEESAQFGS---  235 (272)
Q Consensus       191 --------------~~---~------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~------~---~~~~~~~~~---  235 (272)
                                    .+   .      +..+..++...|++++.+.|+.+..+......      .   .........   
T Consensus       153 ~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (372)
T 3slg_A          153 FDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEN  232 (372)
T ss_dssp             BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCC
T ss_pred             CCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCC
Confidence                          11   1      23344444444999999999999887643211      1   111111111   


Q ss_pred             ------CCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          236 ------EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       236 ------~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                            ......+.+.+|+|+++++++... .....|+++++
T Consensus       233 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~~ni  273 (372)
T 3slg_A          233 ISLVDGGSQKRAFTYVDDGISALMKIIENS-NGVATGKIYNI  273 (372)
T ss_dssp             EEEGGGGCCEEECEEHHHHHHHHHHHHHCG-GGTTTTEEEEE
T ss_pred             cEEeCCCceEEEEEEHHHHHHHHHHHHhcc-cCcCCCceEEe
Confidence                  112224567899999999999765 33356788775

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.79  E-value=1.1e-18  Score=150.45  Aligned_cols=197  Identities=15%  Similarity=0.074  Sum_probs=135.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|+||++++++|+++|++|++++|........             ...++.++.+|+++.+++.++++.    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~----   64 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN-------------VPKGVPFFRVDLRDKEGVERAFRE----   64 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG-------------SCTTCCEECCCTTCHHHHHHHHHH----
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh-------------cccCeEEEECCCCCHHHHHHHHHh----
Confidence            699999999999999999999999999998853321100             123577889999999998888764    


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC-CCccC------------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV-EPLWH------------  190 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~-~~~~~------------  190 (272)
                       .++|+|||+|+....     ..+.+++...+++|+.+++++++++...  ..++||++||. +.+..            
T Consensus        65 -~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~~~~~~~~E~~~  136 (311)
T 2p5y_A           65 -FRPTHVSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEVPEGERAEETWP  136 (311)
T ss_dssp             -HCCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCCCTTCCBCTTSC
T ss_pred             -cCCCEEEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCCCCCCCcCCCCC
Confidence             269999999997431     1345667889999999999999998753  23699999997 22111            


Q ss_pred             ----Chh--HH----HHHHHHh-hCCeEEEEEecccccCCCCCCCCC----HHHHHhhc--------------cCCCCCC
Q 039897          191 ----SPE--AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPSSFS----EEESAQFG--------------SEVPMKR  241 (272)
Q Consensus       191 ----~~~--~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~----~~~~~~~~--------------~~~~~~~  241 (272)
                          .+.  +|    .+...++ ..|++++.+.||.+.++.......    ........              ...+...
T Consensus       137 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  216 (311)
T 2p5y_A          137 PRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRD  216 (311)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEEC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEe
Confidence                011  22    2223332 248999999999999886533211    11111111              1112234


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +.+++|+|++++++++..      |+++++
T Consensus       217 ~i~v~Dva~a~~~~~~~~------~~~~~i  240 (311)
T 2p5y_A          217 YVYVGDVAEAHALALFSL------EGIYNV  240 (311)
T ss_dssp             EEEHHHHHHHHHHHHHHC------CEEEEE
T ss_pred             eEEHHHHHHHHHHHHhCC------CCEEEe
Confidence            567899999999998642      566654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.78  E-value=1.4e-18  Score=154.19  Aligned_cols=194  Identities=16%  Similarity=0.041  Sum_probs=135.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .++++||||||+|+||++++++|+++|++|++++|+.......             ...++.++.+|+++.+++.++++ 
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~v~~~~~Dl~d~~~~~~~~~-   92 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------------DMFCDEFHLVDLRVMENCLKVTE-   92 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------------GGTCSEEEECCTTSHHHHHHHHT-
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------------ccCCceEEECCCCCHHHHHHHhC-
Confidence            3568999999999999999999999999999999975542211             12367889999999988887764 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC--------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS--------  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~--------  191 (272)
                            ++|+|||+|+....    .....+++...+++|+.++.++++++...  ..++||++||...+...        
T Consensus        93 ------~~d~Vih~A~~~~~----~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~~~~~~  160 (379)
T 2c5a_A           93 ------GVDHVFNLAADMGG----MGFIQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLETTNV  160 (379)
T ss_dssp             ------TCSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred             ------CCCEEEECceecCc----ccccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCCCccCC
Confidence                  79999999997431    11113456788999999999999998753  23599999997544310        


Q ss_pred             --------h------h--HH----HHHHHHh-hCCeEEEEEecccccCCCCCCCC-----CHHHHHhhcc----------
Q 039897          192 --------P------E--AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPSSF-----SEEESAQFGS----------  235 (272)
Q Consensus       192 --------~------~--~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~-----~~~~~~~~~~----------  235 (272)
                              +      .  ++    .+..++. ..|++++.+.||.+.++......     ..........          
T Consensus       161 ~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  240 (379)
T 2c5a_A          161 SLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGD  240 (379)
T ss_dssp             EECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESC
T ss_pred             CcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCC
Confidence                    1      1  22    2333332 24899999999999888643211     1112211111          


Q ss_pred             CCCCCCCCCccchhhhhhhhhccC
Q 039897          236 EVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       236 ~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      ......+.+++|+|+++++++...
T Consensus       241 g~~~~~~i~v~Dva~ai~~~l~~~  264 (379)
T 2c5a_A          241 GLQTRSFTFIDECVEGVLRLTKSD  264 (379)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHHSS
T ss_pred             CCeeEEEEEHHHHHHHHHHHhhcc
Confidence            112234567899999999998653

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.78  E-value=1.4e-18  Score=151.69  Aligned_cols=128  Identities=16%  Similarity=0.188  Sum_probs=103.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcC-------CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEG-------ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF  109 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G-------~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (272)
                      ...|++++||||||+|+||++++++|+++|       ++|++++|+......             ....++.++.+|+++
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------------~~~~~~~~~~~Dl~d   75 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------------GFSGAVDARAADLSA   75 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------------TCCSEEEEEECCTTS
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------------ccCCceeEEEcCCCC
Confidence            445889999999999999999999999999       899999997543211             024567889999999


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCC
Q 039897          110 DENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVE  186 (272)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~  186 (272)
                      .+++.++++      +++|+||||||...      ..+.+++...+++|+.++.++++++.+..++   .++||++||.+
T Consensus        76 ~~~~~~~~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~  143 (342)
T 2hrz_A           76 PGEAEKLVE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIA  143 (342)
T ss_dssp             TTHHHHHHH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG
T ss_pred             HHHHHHHHh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchH
Confidence            998888775      47999999999743      1245678899999999999999999875421   46999999986


Q ss_pred             Ccc
Q 039897          187 PLW  189 (272)
Q Consensus       187 ~~~  189 (272)
                      .+.
T Consensus       144 ~~~  146 (342)
T 2hrz_A          144 VFG  146 (342)
T ss_dssp             GCC
T ss_pred             hhC
Confidence            554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.78  E-value=1.3e-18  Score=151.76  Aligned_cols=198  Identities=17%  Similarity=0.152  Sum_probs=132.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|+||||||+|+||++++++|+++|++|+++.|+.......... ..+.     ...++.++.+|+++.+++.++++   
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~-~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~---   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHL-LELQ-----ELGDLKIFRADLTDELSFEAPIA---   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHH-HHHG-----GGSCEEEEECCTTTSSSSHHHHT---
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHH-HhcC-----CCCcEEEEecCCCChHHHHHHHc---
Confidence            68999999999999999999999999999988875433222111 1111     12457789999999988877764   


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc------------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW------------  189 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~------------  189 (272)
                          ++|+|||+|+...    +.  ..+..++.+++|+.++.++++++.+.. ..++||++||.++.+            
T Consensus        80 ----~~D~Vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~~~~~~~~~~  148 (338)
T 2rh8_A           80 ----GCDFVFHVATPVH----FA--SEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQLDGTGLVVD  148 (338)
T ss_dssp             ----TCSEEEEESSCCC----C-----------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred             ----CCCEEEEeCCccC----CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCCcCCCCcccC
Confidence                5899999998631    11  112234588999999999999998753 135999999965210            


Q ss_pred             ------------------CChh----HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHh---hccC---C---
Q 039897          190 ------------------HSPE----ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQ---FGSE---V---  237 (272)
Q Consensus       190 ------------------~~~~----~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~---~~~~---~---  237 (272)
                                        .+..    +..++.++.+ +|++++++.||.+.++.............   ....   .   
T Consensus       149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~  228 (338)
T 2rh8_A          149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGM  228 (338)
T ss_dssp             TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHH
T ss_pred             hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccc
Confidence                              0111    4556666654 58999999999999987543332211000   0000   0   


Q ss_pred             -------CCCCCCCccchhhhhhhhhccC
Q 039897          238 -------PMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       238 -------~~~~~~~~~dva~~~~~L~s~~  259 (272)
                             ....+.+++|+|++++++++..
T Consensus       229 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  257 (338)
T 2rh8_A          229 KGMQMLSGSVSIAHVEDVCRAHIFVAEKE  257 (338)
T ss_dssp             HHHHHHHSSEEEEEHHHHHHHHHHHHHCT
T ss_pred             cccccccCcccEEEHHHHHHHHHHHHcCC
Confidence                   0013678999999999998654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.78  E-value=9.9e-19  Score=152.37  Aligned_cols=201  Identities=11%  Similarity=0.041  Sum_probs=137.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc---C---CeEEEEecccch--hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALE---G---ATVAFTYVKSQE--EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~---G---~~v~i~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +||||||+|+||++++++|+++   |   ++|++++|+...  .+.+..    +.     ...++.++.+|+++.+++.+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~----~~-----~~~~~~~~~~Dl~d~~~~~~   72 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP----VD-----ADPRLRFVHGDIRDAGLLAR   72 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG----GT-----TCTTEEEEECCTTCHHHHHH
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhh----cc-----cCCCeEEEEcCCCCHHHHHH
Confidence            6999999999999999999997   8   999999986421  111111    10     23568889999999988777


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC----
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS----  191 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~----  191 (272)
                      ++       +++|+|||+||....     +.+.++++..+++|+.++.++++++.+..  .++||++||.+.+...    
T Consensus        73 ~~-------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vyg~~~~~~  138 (337)
T 1r6d_A           73 EL-------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSIDSGS  138 (337)
T ss_dssp             HT-------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCSSSC
T ss_pred             Hh-------cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHhCCCCCCC
Confidence            66       479999999997431     12345667889999999999999998863  3599999997543221    


Q ss_pred             --------h---h--HH----HHHHHHhh-CCeEEEEEecccccCCCCCCC-CCHHHHHhhccC--C-------CCCCCC
Q 039897          192 --------P---E--AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSE--V-------PMKRAG  243 (272)
Q Consensus       192 --------~---~--~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~--~-------~~~~~~  243 (272)
                              +   .  +|    .+...+.. .|++++.+.||.+.++..... ............  .       ....+.
T Consensus       139 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  218 (337)
T 1r6d_A          139 WTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (337)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeE
Confidence                    0   1  22    33333332 489999999999988874321 111111111111  1       122455


Q ss_pred             CccchhhhhhhhhccCCCCcccceeecc
Q 039897          244 QPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +++|+|+++++++...    .+|+++++
T Consensus       219 ~v~Dva~a~~~~~~~~----~~g~~~~v  242 (337)
T 1r6d_A          219 HTDDHCRGIALVLAGG----RAGEIYHI  242 (337)
T ss_dssp             EHHHHHHHHHHHHHHC----CTTCEEEE
T ss_pred             eHHHHHHHHHHHHhCC----CCCCEEEe
Confidence            7899999999998754    36777776

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.77  E-value=2.2e-18  Score=152.73  Aligned_cols=205  Identities=11%  Similarity=0.028  Sum_probs=138.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+++++||||||+|+||++++++|+++| ++|++++|+.......      +     ....++.++.+|+++++++.++
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~------l-----~~~~~v~~~~~Dl~d~~~l~~~   96 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN------V-----PDHPAVRFSETSITDDALLASL   96 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG------S-----CCCTTEEEECSCTTCHHHHHHC
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh------c-----cCCCceEEEECCCCCHHHHHHH
Confidence            35788999999999999999999999999 9999999875432110      0     0145678899999998877766


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc-------
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW-------  189 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~-------  189 (272)
                      ++       ++|+|||+||....     ..+.+++...+++|+.++.++++++... ...++||++||.+.+.       
T Consensus        97 ~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~V~~SS~~vyg~~~~~~~  163 (377)
T 2q1s_A           97 QD-------EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLKHF-KRLKKVVYSAAGCSIAEKTFDDA  163 (377)
T ss_dssp             CS-------CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHTTC-SSCCEEEEEEEC-----------
T ss_pred             hh-------CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCCHHHcCCCCCCCc
Confidence            53       79999999997431     1234567889999999999999988542 0225899999975321       


Q ss_pred             ---------C--Chh-----H----HHHHHHHhh-CCeEEEEEecccccCCCC---------CC-----CCCHHHHHhhc
Q 039897          190 ---------H--SPE-----A----RGLALQLVE-RGIRVNGVAPGPIWTPLI---------PS-----SFSEEESAQFG  234 (272)
Q Consensus       190 ---------~--~~~-----~----~~la~e~~~-~gi~vn~i~PG~v~t~~~---------~~-----~~~~~~~~~~~  234 (272)
                               +  .+.     +    ..+..++.. .|++++.+.||.+.++..         ..     ...........
T Consensus       164 ~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  243 (377)
T 2q1s_A          164 KATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL  243 (377)
T ss_dssp             ---CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH
T ss_pred             CcccccccccccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH
Confidence                     1  111     2    233333322 489999999999988764         11     11111222221


Q ss_pred             cCCC---------CCCCCCccchhhh-hhhhhccCCCCcccceeecc
Q 039897          235 SEVP---------MKRAGQPIEVAPC-YVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       235 ~~~~---------~~~~~~~~dva~~-~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ...+         ...+.+++|+|++ +++++..+ .   +| ++++
T Consensus       244 ~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~-~---~g-~~~i  285 (377)
T 2q1s_A          244 KGMPLPLENGGVATRDFIFVEDVANGLIACAADGT-P---GG-VYNI  285 (377)
T ss_dssp             TTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCC-T---TE-EEEC
T ss_pred             cCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcC-C---CC-eEEe
Confidence            1111         1234568999999 99988764 2   57 7765

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.77  E-value=2.3e-18  Score=148.55  Aligned_cols=196  Identities=14%  Similarity=0.087  Sum_probs=132.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+||||||+|+||++++++|+++|+.|++..++....+.              ....+.++.+|+++ +++.++++    
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~--------------~~~~~~~~~~Dl~~-~~~~~~~~----   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF--------------VNEAARLVKADLAA-DDIKDYLK----   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG--------------SCTTEEEECCCTTT-SCCHHHHT----
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh--------------cCCCcEEEECcCCh-HHHHHHhc----
Confidence            479999999999999999999999555544343222211              24567889999998 77777664    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----------  192 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  192 (272)
                         ++|+|||+|+....     ..+.+++...+++|+.++.++++++...  ..++||++||.+.+....          
T Consensus        63 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~vyg~~~~~~~~E~~~~  132 (313)
T 3ehe_A           63 ---GAEEVWHIAANPDV-----RIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTSTVYGEAKVIPTPEDYPT  132 (313)
T ss_dssp             ---TCSEEEECCCCCCC-----C-CCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGGCSCSSSSBCTTSCC
T ss_pred             ---CCCEEEECCCCCCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCchHHhCcCCCCCCCCCCCC
Confidence               79999999986321     2344567889999999999999987653  246999999976543211          


Q ss_pred             -----h--H----HHHHHHHh-hCCeEEEEEecccccCCCCCCCCCHHHHHhh----------ccCCCCCCCCCccchhh
Q 039897          193 -----E--A----RGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEESAQF----------GSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       193 -----~--~----~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~dva~  250 (272)
                           .  +    ..+...++ ..|++++.+.|+.+.++..............          ........+.+.+|+|+
T Consensus       133 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  212 (313)
T 3ehe_A          133 HPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVD  212 (313)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHH
Confidence                 1  2    23333333 2589999999999988764332111111111          11112234567899999


Q ss_pred             hhhhhhccCCCCcccceeecc
Q 039897          251 CYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ++++++...    ..|+++++
T Consensus       213 a~~~~~~~~----~~~~~~ni  229 (313)
T 3ehe_A          213 AMLFGLRGD----ERVNIFNI  229 (313)
T ss_dssp             HHHHHTTCC----SSEEEEEC
T ss_pred             HHHHHhccC----CCCceEEE
Confidence            999998733    34677765

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.77  E-value=1e-18  Score=153.58  Aligned_cols=203  Identities=12%  Similarity=0.115  Sum_probs=134.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+++++||||||+|+||++++++|+++| ++|++++|+..... ..            .-.++. +.+|+++.+.++++
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~------------~~~~~~-~~~d~~~~~~~~~~  107 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV------------NLVDLN-IADYMDKEDFLIQI  107 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG------------GTTTSC-CSEEEEHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh------------cccCce-EeeecCcHHHHHHH
Confidence            34778999999999999999999999999 99999988754321 10            011222 67899988887777


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----  192 (272)
                      ++.  ..++++|+|||+||....       +.+++...+++|+.++.++++++.+.  .. +||++||.+.+....    
T Consensus       108 ~~~--~~~~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~--~~-r~V~~SS~~v~g~~~~~~~  175 (357)
T 2x6t_A          108 MAG--EEFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFI  175 (357)
T ss_dssp             HTT--CCCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGCSCSSCCC
T ss_pred             Hhh--cccCCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEcchHHhCCCCCCCc
Confidence            653  124579999999997432       22346788999999999999999873  23 999999986543221    


Q ss_pred             -----------h------HHHHHHHHhh-CCeEEEEEecccccCCCCCCC-----CCHHHHHhhccC---------CC-C
Q 039897          193 -----------E------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSS-----FSEEESAQFGSE---------VP-M  239 (272)
Q Consensus       193 -----------~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~~---------~~-~  239 (272)
                                 .      +..+..++.. .|++++.+.||.+.++.....     ............         .. .
T Consensus       176 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (357)
T 2x6t_A          176 ESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK  255 (357)
T ss_dssp             SSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCE
T ss_pred             CCcCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcce
Confidence                       1      2333344433 489999999999988764311     111111111111         11 2


Q ss_pred             CCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          240 KRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       240 ~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ..+.+++|+|+++++++... .    |+++++
T Consensus       256 ~~~i~v~Dva~ai~~~~~~~-~----~~~~~i  282 (357)
T 2x6t_A          256 RDFVYVGDVADVNLWFLENG-V----SGIFNL  282 (357)
T ss_dssp             ECEEEHHHHHHHHHHHHHHC-C----CEEEEE
T ss_pred             EccEEHHHHHHHHHHHHhcC-C----CCeEEe
Confidence            34568899999999998765 2    677765

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.77  E-value=1.6e-19  Score=147.31  Aligned_cols=180  Identities=13%  Similarity=0.025  Sum_probs=129.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .++++|||||+|+||++++++|+++|+  +|++++|+...                 ...++.++.+|+++.+++.+++ 
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------------~~~~~~~~~~D~~~~~~~~~~~-   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------------EHPRLDNPVGPLAELLPQLDGS-   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------------CCTTEECCBSCHHHHGGGCCSC-
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------------cCCCceEEeccccCHHHHHHhh-
Confidence            468999999999999999999999998  99999997543                 1235677889998877665543 


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----H
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----A  194 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----~  194 (272)
                              +|+||||||....       +.++++..+++|+.++.++++++.+.  ..++||++||...+.....    .
T Consensus        66 --------~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~y~~s  128 (215)
T 2a35_A           66 --------IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADAKSSIFYNRV  128 (215)
T ss_dssp             --------CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTCSSHHHHH
T ss_pred             --------hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCCCCccHHHHH
Confidence                    8999999997431       23456788999999999999998764  2358999999876543221    4


Q ss_pred             HHHHHHHh-hCCeE-EEEEecccccCCCCCCCCCHHHHHhhc-cCCC----CCCCCCccchhhhhhhhhccC
Q 039897          195 RGLALQLV-ERGIR-VNGVAPGPIWTPLIPSSFSEEESAQFG-SEVP----MKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       195 ~~la~e~~-~~gi~-vn~i~PG~v~t~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~dva~~~~~L~s~~  259 (272)
                      +....++. ..|++ ++.+.||.+.++.....+    .+.+. ...+    ...+.+++|+|++++.++..+
T Consensus       129 K~~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  196 (215)
T 2a35_A          129 KGELEQALQEQGWPQLTIARPSLLFGPREEFRL----AEILAAPIARILPGKYHGIEACDLARALWRLALEE  196 (215)
T ss_dssp             HHHHHHHHTTSCCSEEEEEECCSEESTTSCEEG----GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCCeEEEEeCceeeCCCCcchH----HHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcC
Confidence            44444443 35898 999999999887542111    01111 0111    112457899999999998765

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.77  E-value=7.1e-19  Score=148.57  Aligned_cols=170  Identities=15%  Similarity=0.118  Sum_probs=126.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .|++|||||+|+||++++++|+++|++|++++|+....                ...++.++.+|+++++++.++++   
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------------~~~~~~~~~~Dl~d~~~~~~~~~---   62 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----------------AEAHEEIVACDLADAQAVHDLVK---   62 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC----------------CCTTEEECCCCTTCHHHHHHHHT---
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc----------------cCCCccEEEccCCCHHHHHHHHc---
Confidence            36899999999999999999999999999999975431                11346788999999988887775   


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh---------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP---------  192 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~---------  192 (272)
                          ++|+||||||...         .+++...+++|+.++.++++++.+.  ..++||++||...+...+         
T Consensus        63 ----~~d~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~E~~  127 (267)
T 3ay3_A           63 ----DCDGIIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARNL--GKPRIVFASSNHTIGYYPRTTRIDTEV  127 (267)
T ss_dssp             ----TCSEEEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHHT--TCCEEEEEEEGGGSTTSBTTSCBCTTS
T ss_pred             ----CCCEEEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCHHHhCCCCCCCCCCCCC
Confidence                5999999999741         1235788999999999999998763  346999999986543321         


Q ss_pred             -------h--H----HHHHHHHh-hCCeEEEEEecccc-cCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 -------E--A----RGLALQLV-ERGIRVNGVAPGPI-WTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 -------~--~----~~la~e~~-~~gi~vn~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                             .  +    ..+...+. +.|++++.+.||.+ .++.     ....         ...+.+++|+|++++.++.
T Consensus       128 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~-----~~~~---------~~~~~~~~dva~~~~~~~~  193 (267)
T 3ay3_A          128 PRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK-----DARM---------MATWLSVDDFMRLMKRAFV  193 (267)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC-----SHHH---------HHHBCCHHHHHHHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC-----CCCe---------eeccccHHHHHHHHHHHHh
Confidence                   1  2    23333332 46899999999998 3332     1111         1234689999999999987


Q ss_pred             cC
Q 039897          258 NH  259 (272)
Q Consensus       258 ~~  259 (272)
                      ..
T Consensus       194 ~~  195 (267)
T 3ay3_A          194 AP  195 (267)
T ss_dssp             SS
T ss_pred             CC
Confidence            64

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.76  E-value=1.4e-17  Score=144.52  Aligned_cols=153  Identities=12%  Similarity=0.096  Sum_probs=115.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||+|+||++++++|+++|++|++++|+......      .       ...++.++.+|+++.+++.+++++   
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~-------~~~~~~~~~~D~~~~~~~~~~~~~---   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED------A-------ITEGAKFYNGDLRDKAFLRDVFTQ---   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG------G-------SCTTSEEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh------h-------cCCCcEEEECCCCCHHHHHHHHhh---
Confidence            589999999999999999999999999999987543210      0       223688899999999988888765   


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----------  191 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  191 (272)
                        .++|+|||+||.....     .+.+++...+++|+.++.++++++...  ..++||++||.+.+...           
T Consensus        66 --~~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~~E~~~~  136 (330)
T 2c20_A           66 --ENIEAVMHFAADSLVG-----VSMEKPLQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATYGEVDVDLITEETMT  136 (330)
T ss_dssp             --SCEEEEEECCCCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGGCSCSSSSBCTTSCC
T ss_pred             --cCCCEEEECCcccCcc-----ccccCHHHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceeeCCCCCCCCCcCCCC
Confidence              4799999999974321     144667889999999999999988653  23689999997654321           


Q ss_pred             ----hh--H----HHHHHHHhh-CCeEEEEEecccccCCC
Q 039897          192 ----PE--A----RGLALQLVE-RGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       192 ----~~--~----~~la~e~~~-~gi~vn~i~PG~v~t~~  220 (272)
                          +.  +    ..+..++.. .|++++.+.|+.+..+.
T Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          137 NPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCC
Confidence                11  2    333334433 48999999999998774

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.76  E-value=1.8e-17  Score=146.27  Aligned_cols=204  Identities=16%  Similarity=0.056  Sum_probs=129.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh--hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE--KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +|+||||||+|+||++++++|+++|++|++++|+....  +.+........    ....++.++.+|+++.+++.++++.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH----TCNPKFHLHYGDLSDTSNLTRILRE   76 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccc----cCCCceEEEECCCCCHHHHHHHHHh
Confidence            37899999999999999999999999999999875431  11111111100    0135678899999999999988876


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCC-------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHS-------  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~-------  191 (272)
                      .     ++|+||||||.....     .+.+++...+++|+.++.++++++.+.+.+ .++||++||.+.+...       
T Consensus        77 ~-----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E  146 (372)
T 1db3_A           77 V-----QPDEVYNLGAMSHVA-----VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKE  146 (372)
T ss_dssp             H-----CCSEEEECCCCCTTT-----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             c-----CCCEEEECCcccCcc-----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCc
Confidence            5     699999999974321     234456788999999999999999886532 3799999997554321       


Q ss_pred             --------hh--H----HHHHHHHhh-CCeEEEEEecccccCCCCCCCCCH----HHHHhhc-cC---------CCCCCC
Q 039897          192 --------PE--A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSE----EESAQFG-SE---------VPMKRA  242 (272)
Q Consensus       192 --------~~--~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~----~~~~~~~-~~---------~~~~~~  242 (272)
                              +.  +    ..+...++. .++.+..+.|..+..+........    ....... ..         .....+
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  226 (372)
T 1db3_A          147 TTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW  226 (372)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeee
Confidence                    11  2    233333332 377777777766555432221111    1111111 11         111235


Q ss_pred             CCccchhhhhhhhhccC
Q 039897          243 GQPIEVAPCYVFLACNH  259 (272)
Q Consensus       243 ~~~~dva~~~~~L~s~~  259 (272)
                      .+.+|+|++++.++...
T Consensus       227 i~v~Dva~a~~~~~~~~  243 (372)
T 1db3_A          227 GHAKDYVKMQWMMLQQE  243 (372)
T ss_dssp             EEHHHHHHHHHHTTSSS
T ss_pred             eEHHHHHHHHHHHHhcC
Confidence            67899999999888654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.75  E-value=4.4e-18  Score=146.86  Aligned_cols=196  Identities=13%  Similarity=0.049  Sum_probs=107.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|+||||||+|+||++++++|+++|++|++++|+...                   .+  ++.+|+++.+++.++++.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------------~~--~~~~Dl~d~~~~~~~~~~~-   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------------PK--FEQVNLLDSNAVHHIIHDF-   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CHHHHHHH-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------------CC--eEEecCCCHHHHHHHHHhh-
Confidence            6799999999999999999999999999999886321                   01  5789999999888888754 


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-----------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-----------  190 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-----------  190 (272)
                          ++|+||||||....     ..+.+++...+++|+.++.++++++.+.   +++||++||...+.+           
T Consensus        60 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~~~~~~~~~E~~~~  127 (315)
T 2ydy_A           60 ----QPHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV---GAFLIYISSDYVFDGTNPPYREEDIP  127 (315)
T ss_dssp             ----CCSEEEECC------------------------CHHHHHHHHHHHHH---TCEEEEEEEGGGSCSSSCSBCTTSCC
T ss_pred             ----CCCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchHHHcCCCCCCCCCCCCC
Confidence                69999999997432     1245678899999999999999999863   359999999876543           


Q ss_pred             Chh-----HHHHHHHHhh-CCeEEEEEecccccCCCCCC--CCCHHHHHhhc--------cCCCCCCCCCccchhhhhhh
Q 039897          191 SPE-----ARGLALQLVE-RGIRVNGVAPGPIWTPLIPS--SFSEEESAQFG--------SEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       191 ~~~-----~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~dva~~~~~  254 (272)
                      .+.     +|..+..+.. .++.+..+.|+.+..+....  .+.........        ...+...+.+++|+|+++++
T Consensus       128 ~~~~~Y~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  207 (315)
T 2ydy_A          128 APLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQ  207 (315)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHH
Confidence            111     3333333222 13444567777665443220  11111111111        11234456789999999999


Q ss_pred             hhccCCCCcccceeecc
Q 039897          255 LACNHCSSYITGQVLHP  271 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~i  271 (272)
                      +++........|+++++
T Consensus       208 ~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          208 LAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             HHHHHHTCTTCCEEEEC
T ss_pred             HHHhhccccCCCCeEEE
Confidence            98642011245777765

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.75  E-value=6e-18  Score=147.58  Aligned_cols=201  Identities=13%  Similarity=0.051  Sum_probs=136.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh-HHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD-ENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~  120 (272)
                      ++||||||+|+||++++++|+++ |++|++++|+......+.            ...++.++.+|+++. +.+.++++  
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~--   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------NHPHFHFVEGDISIHSEWIEYHVK--   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------------TCTTEEEEECCTTTCSHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------------cCCCeEEEeccccCcHHHHHhhcc--
Confidence            47999999999999999999998 899999999765432210            234678899999984 45666654  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---------  191 (272)
                           ++|+|||+||.....     ...+++...+++|+.++.++++++...   +++||++||.+.+...         
T Consensus        67 -----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~v~g~~~~~~~~e~~  133 (345)
T 2bll_A           67 -----KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKYFDEDH  133 (345)
T ss_dssp             -----HCSEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCCSSBCTTT
T ss_pred             -----CCCEEEEcccccCcc-----chhcCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEEecHHHcCCCCCCCcCCcc
Confidence                 489999999974321     123456778999999999999998763   2699999996543210         


Q ss_pred             -------------hh--HH----HHHHHHh-hCCeEEEEEecccccCCCCCCCC------C---HHHHHhhccC------
Q 039897          192 -------------PE--AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPSSF------S---EEESAQFGSE------  236 (272)
Q Consensus       192 -------------~~--~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~------~---~~~~~~~~~~------  236 (272)
                                   +.  ++    .+..++. ..|++++.+.||.+.++......      .   ..........      
T Consensus       134 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (345)
T 2bll_A          134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI  213 (345)
T ss_dssp             CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEG
T ss_pred             cccccCcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEE
Confidence                         11  22    2233332 24899999999999887643210      1   1111111111      


Q ss_pred             ---CCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          237 ---VPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       237 ---~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                         .....+.+.+|+|+++++++... ....+|+++++
T Consensus       214 ~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~g~~~~i  250 (345)
T 2bll_A          214 DGGKQKRCFTDIRDGIEALYRIIENA-GNRCDGEIINI  250 (345)
T ss_dssp             GGSCCEEECEEHHHHHHHHHHHHHCG-GGTTTTEEEEE
T ss_pred             CCCCEEEEEEEHHHHHHHHHHHHhhc-cccCCCceEEe
Confidence               12223668899999999998754 33356888776

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.75  E-value=2.7e-17  Score=141.80  Aligned_cols=191  Identities=12%  Similarity=0.060  Sum_probs=133.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +++||||||+|.||++++++|+++|++|++++|+..... +             .  ++.++.+|++ .+++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-------------~--~~~~~~~Dl~-~~~~~~~~~---   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-------------N--DYEYRVSDYT-LEDLINQLN---   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------------CCEEEECCCC-HHHHHHHTT---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-------------C--ceEEEEcccc-HHHHHHhhc---
Confidence            478999999999999999999999999999999832211 1             1  5788999999 887777664   


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh---------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP---------  192 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~---------  192 (272)
                          ++|+|||+|+.....         +....+++|+.++.++++++...  .-.+||++||...+....         
T Consensus        62 ----~~d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~~--~~~r~v~~SS~~vyg~~~~~~~~E~~~  126 (311)
T 3m2p_A           62 ----DVDAVVHLAATRGSQ---------GKISEFHDNEILTQNLYDACYEN--NISNIVYASTISAYSDETSLPWNEKEL  126 (311)
T ss_dssp             ----TCSEEEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCCGGGCSBCTTSC
T ss_pred             ----CCCEEEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCCCCCCCCCCCC
Confidence                799999999985432         33556889999999999998753  235899999965543221         


Q ss_pred             ------h------HHHHHHHHhh-CCeEEEEEecccccCCCCCCC-CCHHHHHhhccC---------CCCCCCCCccchh
Q 039897          193 ------E------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGSE---------VPMKRAGQPIEVA  249 (272)
Q Consensus       193 ------~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~dva  249 (272)
                            .      +..+..++.+ .|++++.+.|+.+..+..... ............         .....+.+.+|+|
T Consensus       127 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva  206 (311)
T 3m2p_A          127 PLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAA  206 (311)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHH
Confidence                  0      2333344443 699999999999988765321 111222221111         1122345678999


Q ss_pred             hhhhhhhccCCCCcccceeecc
Q 039897          250 PCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ++++.++... .   .|+++++
T Consensus       207 ~a~~~~~~~~-~---~~~~~~i  224 (311)
T 3m2p_A          207 KSVIYALKQE-K---VSGTFNI  224 (311)
T ss_dssp             HHHHHHTTCT-T---CCEEEEE
T ss_pred             HHHHHHHhcC-C---CCCeEEe
Confidence            9999998765 2   6777765

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.75  E-value=4.2e-17  Score=145.11  Aligned_cols=165  Identities=15%  Similarity=0.085  Sum_probs=117.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecccch---------hhhHHHHHHHHHHhhhc-CCCC---ceEEeccC
Q 039897           42 GKVALVTGGDSGIGRAVAHCYA-LEGATVAFTYVKSQE---------EKDAQETLEILREAKTS-DAKD---PMAISADL  107 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~-~~G~~v~i~~r~~~~---------~~~~~~~~~~~~~~~~~-~~~~---~~~~~~D~  107 (272)
                      +++||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.++.+   ... ...+   +.++.+|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl   78 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQS---DGPKPPWADRYAALEVGDV   78 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHS---CSSCCTTTTCCCEEEESCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHh---hccccccCCceEEEEECCC
Confidence            4589999999999999999999 999999999987543         22222222211   100 0124   88999999


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          108 GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      ++.+++.+++++    ++.+|+||||||.....     .+.+++...+++|+.++.++++++...  ..++||++||.+.
T Consensus        79 ~d~~~~~~~~~~----~~~~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~iv~~SS~~v  147 (397)
T 1gy8_A           79 RNEDFLNGVFTR----HGPIDAVVHMCAFLAVG-----ESVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAAI  147 (397)
T ss_dssp             TCHHHHHHHHHH----SCCCCEEEECCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGG
T ss_pred             CCHHHHHHHHHh----cCCCCEEEECCCccCcC-----cchhhHHHHHHHHhHHHHHHHHHHHHh--CCCEEEEECCHHH
Confidence            999988877763    45699999999974321     134667889999999999999987653  2369999999754


Q ss_pred             ccCCh----------------------h--H----HHHHHHHhh-CCeEEEEEecccccCCC
Q 039897          188 LWHSP----------------------E--A----RGLALQLVE-RGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       188 ~~~~~----------------------~--~----~~la~e~~~-~gi~vn~i~PG~v~t~~  220 (272)
                      +....                      .  +    ..+...++. .|++++.+.|+.+..+.
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAH  209 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCC
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCC
Confidence            43211                      1  2    223333332 38999999999997764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.74  E-value=1.2e-17  Score=145.29  Aligned_cols=202  Identities=13%  Similarity=0.013  Sum_probs=133.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.+++||||||+|+||++++++|+++|++|++++|+......  ..++.+.     ...++.++.+|+++.+++.++++.
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~   84 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG-----IEGDIQYEDGDMADACSVQRAVIK   84 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT-----CGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhcc-----ccCceEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999997654211  0111110     134577899999999999988876


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-------  192 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-------  192 (272)
                      .     ++|+|||+||....     ..+.+++...+++|+.++.++++++.+.- ..++||++||.+.+....       
T Consensus        85 ~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~~~E~  153 (335)
T 1rpn_A           85 A-----QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDEN  153 (335)
T ss_dssp             H-----CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             c-----CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCCCCcc
Confidence            4     69999999997421     11223467889999999999999987641 136999999975543211       


Q ss_pred             --------h--H----HHHHHHHhh-CCeEEEEEecccccCCCCCCCCCH----HHHHhh-ccCC---------CCCCCC
Q 039897          193 --------E--A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSE----EESAQF-GSEV---------PMKRAG  243 (272)
Q Consensus       193 --------~--~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~----~~~~~~-~~~~---------~~~~~~  243 (272)
                              .  +    ..+..++.. .++.+..+.|+.+..+........    ...... ....         ....+.
T Consensus       154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i  233 (335)
T 1rpn_A          154 TPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWG  233 (335)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECE
T ss_pred             cCCCCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceE
Confidence                    1  2    233333333 388888899988877654322211    111111 1111         112345


Q ss_pred             CccchhhhhhhhhccC
Q 039897          244 QPIEVAPCYVFLACNH  259 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~  259 (272)
                      +.+|+|++++.++...
T Consensus       234 ~v~Dva~a~~~~~~~~  249 (335)
T 1rpn_A          234 FAGDYVEAMWLMLQQD  249 (335)
T ss_dssp             EHHHHHHHHHHHHHSS
T ss_pred             EHHHHHHHHHHHHhcC
Confidence            7799999999998754

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.74  E-value=3.4e-17  Score=145.13  Aligned_cols=203  Identities=15%  Similarity=0.029  Sum_probs=132.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh--hhHHHHHHHHHHhhhcCCC-CceEEeccCCChHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE--KDAQETLEILREAKTSDAK-DPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |+||||||+|+||.+++++|+++|++|++++|+....  ..+......+..    ... ++.++.+|+++.+++.++++.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~  104 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN----VNKALMKLHYADLTDASSLRRWIDV  104 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC------------CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc----ccccceEEEECCCCCHHHHHHHHHh
Confidence            7899999999999999999999999999999975431  111111111100    122 678899999999999988876


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCC-----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~-----  191 (272)
                      +     ++|+||||||....     ..+.+++...+++|+.++.++++++.+.+.+   .++||++||.+.+...     
T Consensus       105 ~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~  174 (381)
T 1n7h_A          105 I-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQS  174 (381)
T ss_dssp             H-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBC
T ss_pred             c-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCC
Confidence            5     69999999997432     1345678889999999999999999987643   4699999997654321     


Q ss_pred             ---------hh--H----HHHHHHHhh-CCeEEEEEecccccCCCCCCCCCH----HHHHhh--c--------cCCCCCC
Q 039897          192 ---------PE--A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSE----EESAQF--G--------SEVPMKR  241 (272)
Q Consensus       192 ---------~~--~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~----~~~~~~--~--------~~~~~~~  241 (272)
                               +.  +    ..+...+.. .++.+..+.|..+..+........    ......  .        .......
T Consensus       175 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  254 (381)
T 1n7h_A          175 ETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  254 (381)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceee
Confidence                     11  2    233333333 366665555554444332111110    111111  0        1112234


Q ss_pred             CCCccchhhhhhhhhccC
Q 039897          242 AGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~  259 (272)
                      +.+++|+|+++++++...
T Consensus       255 ~v~v~Dva~a~~~~~~~~  272 (381)
T 1n7h_A          255 WGFAGDYVEAMWLMLQQE  272 (381)
T ss_dssp             CEEHHHHHHHHHHHHTSS
T ss_pred             eEEHHHHHHHHHHHHhCC
Confidence            678899999999998764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.74  E-value=1.5e-17  Score=141.81  Aligned_cols=187  Identities=13%  Similarity=-0.012  Sum_probs=130.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +||||||+|+||++++++|.+. |++|++++|+......+             ...++.++.+|++|++++.++++    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------~~~~v~~~~~D~~d~~~l~~~~~----   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------WRGKVSVRQLDYFNQESMVEAFK----   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------GBTTBEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------hhCCCEEEEcCCCCHHHHHHHHh----
Confidence            5999999999999999999998 99999999986543221             23568899999999988877764    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----HHHH
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----ARGL  197 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----~~~l  197 (272)
                         ++|+||||++....               ...|+.++.++++++...  .-++||++||.......+.     ...+
T Consensus        65 ---~~d~vi~~a~~~~~---------------~~~~~~~~~~l~~aa~~~--gv~~iv~~Ss~~~~~~~~~~~~~~~~~~  124 (289)
T 3e48_A           65 ---GMDTVVFIPSIIHP---------------SFKRIPEVENLVYAAKQS--GVAHIIFIGYYADQHNNPFHMSPYFGYA  124 (289)
T ss_dssp             ---TCSEEEECCCCCCS---------------HHHHHHHHHHHHHHHHHT--TCCEEEEEEESCCSTTCCSTTHHHHHHH
T ss_pred             ---CCCEEEEeCCCCcc---------------chhhHHHHHHHHHHHHHc--CCCEEEEEcccCCCCCCCCccchhHHHH
Confidence               79999999987431               123666666777766542  1358999999754433322     3345


Q ss_pred             HHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCC----CCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKR----AGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       198 a~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ...+...|++++.+.||.+.+++...  ............+.+.    +.+++|+|+++++++..+ ..  .|+++++.
T Consensus       125 e~~~~~~g~~~~ilrp~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~-~~--~g~~~~~~  198 (289)
T 3e48_A          125 SRLLSTSGIDYTYVRMAMYMDPLKPY--LPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNP-DT--WGKRYLLS  198 (289)
T ss_dssp             HHHHHHHCCEEEEEEECEESTTHHHH--HHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCG-GG--TTCEEEEC
T ss_pred             HHHHHHcCCCEEEEeccccccccHHH--HHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCC-Cc--CCceEEeC
Confidence            55666789999999999997764310  0111111111223332    568999999999999875 32  27887763

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.74  E-value=4e-17  Score=144.36  Aligned_cols=204  Identities=14%  Similarity=0.014  Sum_probs=134.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh--hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE--KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |+||||||+|+||++++++|+++|++|++++|+....  ..+.........   ....++.++.+|+++.+++.++++.+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA---HIEGNMKLHYGDLTDSTCLVKIINEV  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC------------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhcc---ccCCCceEEEccCCCHHHHHHHHHhc
Confidence            6899999999999999999999999999999975431  111111000000   01346788999999999999888765


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCC--------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHS--------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~--------  191 (272)
                           ++|+||||||....     ..+.+++...+++|+.++.++++++.+.+.+ .++||++||.+.+...        
T Consensus       102 -----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~  171 (375)
T 1t2a_A          102 -----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET  171 (375)
T ss_dssp             -----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             -----CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc
Confidence                 69999999997431     1235677889999999999999999886542 3699999997655321        


Q ss_pred             -------hh--H----HHHHHHHhh-CCeEEEEEecccccCCCCCCCCCH----HHHHhh-ccC---------CCCCCCC
Q 039897          192 -------PE--A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSE----EESAQF-GSE---------VPMKRAG  243 (272)
Q Consensus       192 -------~~--~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~----~~~~~~-~~~---------~~~~~~~  243 (272)
                             +.  +    ..+...++. .++.+..+.|+.+..+........    ...... ...         .....+.
T Consensus       172 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i  251 (375)
T 1t2a_A          172 TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  251 (375)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeE
Confidence                   11  2    233333333 378888888877766543221111    111111 111         1112356


Q ss_pred             CccchhhhhhhhhccC
Q 039897          244 QPIEVAPCYVFLACNH  259 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~  259 (272)
                      +.+|+|++++.++...
T Consensus       252 ~v~Dva~a~~~~~~~~  267 (375)
T 1t2a_A          252 HAKDYVEAMWLMLQND  267 (375)
T ss_dssp             EHHHHHHHHHHHHHSS
T ss_pred             EHHHHHHHHHHHHhcC
Confidence            7899999999988654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.73  E-value=3.2e-17  Score=138.48  Aligned_cols=184  Identities=15%  Similarity=0.100  Sum_probs=130.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      ++|||||+|+||++++++|+ +|++|++++|+...                 . .+   +.+|+++++++.++++.+   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-----------------~-~~---~~~Dl~~~~~~~~~~~~~---   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-----------------Q-GG---YKLDLTDFPRLEDFIIKK---   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-----------------T-TC---EECCTTSHHHHHHHHHHH---
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-----------------C-CC---ceeccCCHHHHHHHHHhc---
Confidence            69999999999999999999 59999999997531                 0 11   789999999999888764   


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-----------  192 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-----------  192 (272)
                        ++|+||||||....     ....++++..+++|+.++.++++++.+   .+++||++||...+.+.+           
T Consensus        57 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~iv~~SS~~~~~~~~~~~~e~~~~~~  126 (273)
T 2ggs_A           57 --RPDVIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV---IDSYIVHISTDYVFDGEKGNYKEEDIPNP  126 (273)
T ss_dssp             --CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH---TTCEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred             --CCCEEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH---hCCeEEEEecceeEcCCCCCcCCCCCCCC
Confidence              69999999997432     133567889999999999999999975   245999999987653321           


Q ss_pred             ---h--HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCC------CCCCCCccchhhhhhhhhccCCC
Q 039897          193 ---E--ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP------MKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       193 ---~--~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                         .  +|..+..+... +....+.|+.+..+   ..+............+      ...+.+++|+|++++++++.. .
T Consensus       127 ~~~Y~~sK~~~e~~~~~-~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~-~  201 (273)
T 2ggs_A          127 INYYGLSKLLGETFALQ-DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR-K  201 (273)
T ss_dssp             SSHHHHHHHHHHHHHCC-TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHT-C
T ss_pred             CCHHHHHHHHHHHHHhC-CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcC-c
Confidence               1  55555555554 56677778777631   1111111111111111      346788999999999999764 2


Q ss_pred             Ccccceeecc
Q 039897          262 SYITGQVLHP  271 (272)
Q Consensus       262 ~~~tG~~i~i  271 (272)
                         +| ++++
T Consensus       202 ---~g-~~~i  207 (273)
T 2ggs_A          202 ---TG-IIHV  207 (273)
T ss_dssp             ---CE-EEEC
T ss_pred             ---CC-eEEE
Confidence               34 6665

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.72  E-value=1.4e-17  Score=143.26  Aligned_cols=201  Identities=10%  Similarity=-0.029  Sum_probs=136.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +++||||||+|+||++++++|+++  |++|++++|+..... +       .       .++.++.+|+++.+++.++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~-------~-------~~~~~~~~D~~d~~~~~~~~~~   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V-------V-------NSGPFEVVNALDFNQIEHLVEV   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H-------H-------HSSCEEECCTTCHHHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c-------c-------CCCceEEecCCCHHHHHHHHhh
Confidence            478999999999999999999999  899999999755421 1       0       1356889999999988888764


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-------  192 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-------  192 (272)
                      .     ++|+|||+||....      ...+++...+++|+.++.++++++...  ..++||++||...+....       
T Consensus        67 ~-----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e  133 (312)
T 2yy7_A           67 H-----KITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFWPSSIAVFGPTTPKENTPQ  133 (312)
T ss_dssp             T-----TCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHTT--SCSEEECCEEGGGCCTTSCSSSBCS
T ss_pred             c-----CCCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHHhCCCCCCCCccc
Confidence            3     69999999997431      123566788999999999999998763  235999999976543311       


Q ss_pred             ---------h--H----HHHHHHHh-hCCeEEEEEecccccCCCCCCCC---C---HHHHHhhc-c-------CCCCCCC
Q 039897          193 ---------E--A----RGLALQLV-ERGIRVNGVAPGPIWTPLIPSSF---S---EEESAQFG-S-------EVPMKRA  242 (272)
Q Consensus       193 ---------~--~----~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~---~---~~~~~~~~-~-------~~~~~~~  242 (272)
                               .  +    ..+..++. ..|++++.+.|+.+..+......   .   ........ .       ......+
T Consensus       134 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (312)
T 2yy7_A          134 YTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPM  213 (312)
T ss_dssp             SCBCCCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEE
T ss_pred             cCcCCCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeee
Confidence                     1  2    23333332 24899999999999876432111   0   11111111 1       1112234


Q ss_pred             CCccchhhhhhhhhccCCCCcc-cceeecc
Q 039897          243 GQPIEVAPCYVFLACNHCSSYI-TGQVLHP  271 (272)
Q Consensus       243 ~~~~dva~~~~~L~s~~~~~~~-tG~~i~i  271 (272)
                      .+.+|+|++++.++... .... .|+++++
T Consensus       214 i~v~Dva~a~~~~~~~~-~~~~~~~~~~ni  242 (312)
T 2yy7_A          214 MYMDDAIDATINIMKAP-VEKIKIHSSYNL  242 (312)
T ss_dssp             EEHHHHHHHHHHHHHSC-GGGCCCSSCEEC
T ss_pred             eeHHHHHHHHHHHHhCc-ccccccCceEEe
Confidence            56799999999998754 2222 2466664

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.72  E-value=2.9e-17  Score=140.22  Aligned_cols=184  Identities=13%  Similarity=0.096  Sum_probs=128.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ...++||||||+|+||++++++|+++|++|++++|+                            .+|+++.+++.++++.
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~Dl~d~~~~~~~~~~   61 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------------DLDITNVLAVNKFFNE   61 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------------TCCTTCHHHHHHHHHH
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------------cCCCCCHHHHHHHHHh
Confidence            456899999999999999999999999999999874                            3799999988888875


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-------  192 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-------  192 (272)
                      .     ++|+||||||....     ....+++...+++|+.++.++++++.+.   +.+||++||.+.+....       
T Consensus        62 ~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~---~~~iv~~SS~~v~~~~~~~~~~E~  128 (292)
T 1vl0_A           62 K-----KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGEAKEPITEF  128 (292)
T ss_dssp             H-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSCCSSCBCTT
T ss_pred             c-----CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEechHHeECCCCCCCCCCC
Confidence            4     79999999997421     2245678899999999999999999763   24999999975543321       


Q ss_pred             --------h--HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHhhccC-------CCCCCCCCccchhhhhhh
Q 039897          193 --------E--ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE-------VPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       193 --------~--~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~~  254 (272)
                              .  +|..+..+.. .+..+..+.|+.+..+ . ..+...........       -....+.+++|+|+++++
T Consensus       129 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  206 (292)
T 1vl0_A          129 DEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLK  206 (292)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHhhCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHH
Confidence                    1  3333333222 1235788899988766 2 21111111111111       122455678999999999


Q ss_pred             hhccCCCCcccceeecc
Q 039897          255 LACNHCSSYITGQVLHP  271 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~i  271 (272)
                      +++..     +|+++++
T Consensus       207 ~~~~~-----~~~~~~i  218 (292)
T 1vl0_A          207 VIDEK-----NYGTFHC  218 (292)
T ss_dssp             HHHHT-----CCEEEEC
T ss_pred             HHhcC-----CCcEEEe
Confidence            98753     4677765

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.72  E-value=4.9e-17  Score=154.15  Aligned_cols=206  Identities=12%  Similarity=0.055  Sum_probs=140.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH-HHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN-CKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~  116 (272)
                      .+++++||||||+|+||++++++|+++ |++|++++|+......+.            ...++.++.+|+++.++ +.++
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~------------~~~~v~~v~~Dl~d~~~~~~~~  379 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------NHPHFHFVEGDISIHSEWIEYH  379 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT------------TCTTEEEEECCTTTCHHHHHHH
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc------------cCCceEEEECCCCCcHHHHHHh
Confidence            367899999999999999999999998 899999999754432210            23567889999998764 5555


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----  191 (272)
                      ++       ++|+|||+||.....     ...+++...+++|+.++.++++++...   ++++|++||...+...     
T Consensus       380 ~~-------~~D~Vih~Aa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~aa~~~---~~r~V~~SS~~vyg~~~~~~~  444 (660)
T 1z7e_A          380 VK-------KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKYF  444 (660)
T ss_dssp             HH-------HCSEEEECCCCCCTH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCSSSB
T ss_pred             hc-------CCCEEEECceecCcc-----ccccCHHHHHHhhhHHHHHHHHHHHHh---CCEEEEEecHHHcCCCCCccc
Confidence            43       589999999974321     123456788999999999999998764   2699999997543210     


Q ss_pred             -----------------hh--HHH----HHHHHh-hCCeEEEEEecccccCCCCCC---------CCCHHHHHhhccCC-
Q 039897          192 -----------------PE--ARG----LALQLV-ERGIRVNGVAPGPIWTPLIPS---------SFSEEESAQFGSEV-  237 (272)
Q Consensus       192 -----------------~~--~~~----la~e~~-~~gi~vn~i~PG~v~t~~~~~---------~~~~~~~~~~~~~~-  237 (272)
                                       +.  +|.    +..+++ ..|++++.+.||.+.++....         .............. 
T Consensus       445 ~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~  524 (660)
T 1z7e_A          445 DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP  524 (660)
T ss_dssp             CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCC
T ss_pred             CCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCC
Confidence                             01  222    223332 248999999999998876421         00111111111111 


Q ss_pred             --------CCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          238 --------PMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       238 --------~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                              ....+.+++|+|++++++++.. ....+|++++++
T Consensus       525 ~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~~~~~g~~~ni~  566 (660)
T 1z7e_A          525 IKLIDGGKQKRCFTDIRDGIEALYRIIENA-GNRCDGEIINIG  566 (660)
T ss_dssp             EEEEGGGCCEEECEEHHHHHHHHHHHHHCG-GGTTTTEEEEEC
T ss_pred             cEEeCCCCeEEEEEEHHHHHHHHHHHHhCc-cccCCCeEEEEC
Confidence                    1223567899999999998765 334578888764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.72  E-value=1.2e-16  Score=139.15  Aligned_cols=158  Identities=13%  Similarity=0.118  Sum_probs=110.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|+||++++++|+++|++|+++++..+......+.+..+      .+.++.++.+|+++++++.++++.    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~~----   71 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL------GGKHPTFVEGDIRNEALMTEILHD----   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH------HTSCCEEEECCTTCHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh------cCCcceEEEccCCCHHHHHHHhhc----
Confidence            6999999999999999999999999999987543322222222211      134678899999999988888764    


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-----------C-
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-----------S-  191 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-----------~-  191 (272)
                       .++|+||||||.....     ...++....+++|+.++.++++++...  ..++||++||.+.+..           . 
T Consensus        72 -~~~D~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~~~~  143 (338)
T 1udb_A           72 -HAIDTVIHFAGLKAVG-----ESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDNPKIPYVESFPTG  143 (338)
T ss_dssp             -TTCSEEEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCCSSSBCTTSCCC
T ss_pred             -cCCCEEEECCccCccc-----cchhcHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccHHHhCCCCCCCcCcccCCC
Confidence             2699999999974211     123455678999999999999977542  2369999999754321           0 


Q ss_pred             h----h------HHHHHHHHhh-C-CeEEEEEecccccCC
Q 039897          192 P----E------ARGLALQLVE-R-GIRVNGVAPGPIWTP  219 (272)
Q Consensus       192 ~----~------~~~la~e~~~-~-gi~vn~i~PG~v~t~  219 (272)
                      +    .      +..+...++. . ++++..+.|+.+..+
T Consensus       144 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          144 TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA  183 (338)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCC
Confidence            1    1      2333334433 2 799999988766543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.72  E-value=3.3e-17  Score=143.12  Aligned_cols=214  Identities=14%  Similarity=0.086  Sum_probs=126.3

Q ss_pred             ccCCCCcCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhh
Q 039897           14 EAQPGKEHVMEPTPQFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAK   93 (272)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~   93 (272)
                      +++.++ |+.+++|.+.....   ..+++++||||||+|+||++++++|+++|++|++++|+.......   ...+    
T Consensus         3 ~~~~~~-~~~~~~~~~~~~~~---~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~----   71 (343)
T 2b69_A            3 SSHHHH-HHSSGRENLYFQGH---MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHW----   71 (343)
T ss_dssp             ----------------------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGG----
T ss_pred             cccccc-cccccccccccccc---cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhh---hhhh----
Confidence            344443 44556665554444   457789999999999999999999999999999999864322110   0000    


Q ss_pred             hcCCCCceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc
Q 039897           94 TSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM  173 (272)
Q Consensus        94 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  173 (272)
                       ....++.++.+|+++..            +.++|+|||+||..... .    ..+++...+++|+.++.++++++... 
T Consensus        72 -~~~~~~~~~~~D~~~~~------------~~~~d~vih~A~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~a~~~~-  132 (343)
T 2b69_A           72 -IGHENFELINHDVVEPL------------YIEVDQIYHLASPASPP-N----YMYNPIKTLKTNTIGTLNMLGLAKRV-  132 (343)
T ss_dssp             -TTCTTEEEEECCTTSCC------------CCCCSEEEECCSCCSHH-H----HTTCHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             -ccCCceEEEeCccCChh------------hcCCCEEEECccccCch-h----hhhCHHHHHHHHHHHHHHHHHHHHHh-
Confidence             02346788999998752            35799999999974321 0    11234678899999999999988753 


Q ss_pred             ccCCeEEEecCCCCccCC--------------h------h--HH----HHHHHHh-hCCeEEEEEecccccCCCCCCCCC
Q 039897          174 NEGSAIINTTSVEPLWHS--------------P------E--AR----GLALQLV-ERGIRVNGVAPGPIWTPLIPSSFS  226 (272)
Q Consensus       174 ~~~g~iv~vsS~~~~~~~--------------~------~--~~----~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~  226 (272)
                        +.++|++||...+...              +      .  ++    .+..++. ..|++++.+.||.+.++.......
T Consensus       133 --~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~  210 (343)
T 2b69_A          133 --GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG  210 (343)
T ss_dssp             --TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCC
T ss_pred             --CCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcc
Confidence              3489999997544211              1      1  22    2333333 358999999999998876432111


Q ss_pred             ---HHHHHhhcc---------CCCCCCCCCccchhhhhhhhhccC
Q 039897          227 ---EEESAQFGS---------EVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       227 ---~~~~~~~~~---------~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                         .........         ......+...+|+|++++.++...
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  255 (343)
T 2b69_A          211 RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN  255 (343)
T ss_dssp             CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence               111111111         111223568899999999988654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.71  E-value=1.5e-16  Score=145.31  Aligned_cols=164  Identities=13%  Similarity=0.107  Sum_probs=114.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHc---CCeEEEEecccchhhhHHHHHHHHH--------HhhhcCCCCceEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALE---GATVAFTYVKSQEEKDAQETLEILR--------EAKTSDAKDPMAISAD  106 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~---G~~v~i~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~D  106 (272)
                      ...++|+||||||+|+||.+++++|+++   |++|++++|+........+..+.+.        ........++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4567999999999999999999999999   9999999998665433322211110        0000124678999999


Q ss_pred             CCC------hHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEE
Q 039897          107 LGF------DENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII  180 (272)
Q Consensus       107 ~~~------~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv  180 (272)
                      +++      .+.+.++++       ++|+||||||.... .        .+...+++|+.++.++++++...  ...+||
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~-~--------~~~~~~~~Nv~gt~~ll~aa~~~--~~~~~V  210 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA-F--------PYHELFGPNVAGTAELIRIALTT--KLKPFT  210 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB-S--------SCCEEHHHHHHHHHHHHHHHTSS--SCCCEE
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC-c--------CHHHHHHHHHHHHHHHHHHHHhC--CCCeEE
Confidence            994      445555554       59999999998542 1        22456899999999999988653  225899


Q ss_pred             EecCCCCccC----------------------------ChhHH----HHHHHHhh-CCeEEEEEecccccCC
Q 039897          181 NTTSVEPLWH----------------------------SPEAR----GLALQLVE-RGIRVNGVAPGPIWTP  219 (272)
Q Consensus       181 ~vsS~~~~~~----------------------------~~~~~----~la~e~~~-~gi~vn~i~PG~v~t~  219 (272)
                      ++||.+.+..                            +..+|    .+..++.+ .|++++.+.||.|..+
T Consensus       211 ~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          211 YVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD  282 (478)
T ss_dssp             EEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECC
T ss_pred             EEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCC
Confidence            9999654322                            11122    33333433 4899999999999765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.71  E-value=6.3e-17  Score=137.71  Aligned_cols=189  Identities=9%  Similarity=-0.025  Sum_probs=130.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |+||||||+|+||++++++|+++  |++|++++|+......+.             ..++.++.+|++|.+++.++++  
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-------------~~~~~~~~~D~~d~~~l~~~~~--   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-------------DQGVEVRHGDYNQPESLQKAFA--   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-------------HTTCEEEECCTTCHHHHHHHTT--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-------------hcCCeEEEeccCCHHHHHHHHh--
Confidence            47999999999999999999999  999999999754432211             1246789999999988877764  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-hh--HHHH
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-PE--ARGL  197 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-~~--~~~l  197 (272)
                           ++|+|||+|+.. .       ..       ++|+.++.++++++...  .-++||++||....... +.  .+..
T Consensus        66 -----~~d~vi~~a~~~-~-------~~-------~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~~~y~~~K~~  123 (287)
T 2jl1_A           66 -----GVSKLLFISGPH-Y-------DN-------TLLIVQHANVVKAARDA--GVKHIAYTGYAFAEESIIPLAHVHLA  123 (287)
T ss_dssp             -----TCSEEEECCCCC-S-------CH-------HHHHHHHHHHHHHHHHT--TCSEEEEEEETTGGGCCSTHHHHHHH
T ss_pred             -----cCCEEEEcCCCC-c-------Cc-------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCCCCCchHHHHHH
Confidence                 589999999862 1       11       57899999999988653  23599999998654221 11  4444


Q ss_pred             HHHH-hhCCeEEEEEecccccCCCCCCCCCHHHHHh---hccCCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          198 ALQL-VERGIRVNGVAPGPIWTPLIPSSFSEEESAQ---FGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       198 a~e~-~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +.++ ...|++++.+.||.+.++.....+.......   .........+.+++|+|++++.++..+   ..+|+++++
T Consensus       124 ~E~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~---~~~g~~~~i  198 (287)
T 2jl1_A          124 TEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE---GHENKTYNL  198 (287)
T ss_dssp             HHHHHHHTTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS---SCTTEEEEE
T ss_pred             HHHHHHHcCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC---CCCCcEEEe
Confidence            4333 3478999999999887654222111111111   111112335678999999999998754   246787765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.71  E-value=1.5e-17  Score=141.73  Aligned_cols=189  Identities=13%  Similarity=-0.018  Sum_probs=131.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++++||||| +|.||++++++|+++|++|++++|+...                 ...++.++.+|+++.+++.++++ 
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~~~~~~~~~Dl~d~~~~~~~~~-   61 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP-----------------MPAGVQTLIADVTRPDTLASIVH-   61 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC-----------------CCTTCCEEECCTTCGGGCTTGGG-
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc-----------------cccCCceEEccCCChHHHHHhhc-
Confidence            3467899999 5999999999999999999999997543                 24568899999999998887665 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-------  192 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-------  192 (272)
                           +++|+|||+|+...          .+....+++|+.++.++++++..  ...++||++||.+.+....       
T Consensus        62 -----~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~v~~SS~~vyg~~~~~~~~E~  124 (286)
T 3gpi_A           62 -----LRPEILVYCVAASE----------YSDEHYRLSYVEGLRNTLSALEG--APLQHVFFVSSTGVYGQEVEEWLDED  124 (286)
T ss_dssp             -----GCCSEEEECHHHHH----------HC-----CCSHHHHHHHHHHTTT--SCCCEEEEEEEGGGCCCCCSSEECTT
T ss_pred             -----CCCCEEEEeCCCCC----------CCHHHHHHHHHHHHHHHHHHHhh--CCCCEEEEEcccEEEcCCCCCCCCCC
Confidence                 36999999998732          33466789999999999998863  1236899999976543221       


Q ss_pred             ----------hHHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhc------cCCCCCCCCCccchhhhhhhhh
Q 039897          193 ----------EARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG------SEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       193 ----------~~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~------~~~~~~~~~~~~dva~~~~~L~  256 (272)
                                .++..+.++... ++++.+.|+.+..+...     .....+.      .......+.+.+|+|+++++++
T Consensus       125 ~~~~p~~~Y~~sK~~~E~~~~~-~~~~ilR~~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  198 (286)
T 3gpi_A          125 TPPIAKDFSGKRMLEAEALLAA-YSSTILRFSGIYGPGRL-----RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLI  198 (286)
T ss_dssp             SCCCCCSHHHHHHHHHHHHGGG-SSEEEEEECEEEBTTBC-----HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHH
T ss_pred             CCCCCCChhhHHHHHHHHHHhc-CCeEEEecccccCCCch-----hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHH
Confidence                      145555555233 89999999999877532     1111111      1122234557899999999998


Q ss_pred             ccCCCCcccceeecc
Q 039897          257 CNHCSSYITGQVLHP  271 (272)
Q Consensus       257 s~~~~~~~tG~~i~i  271 (272)
                      ... .....|+++++
T Consensus       199 ~~~-~~~~~~~~~~~  212 (286)
T 3gpi_A          199 QQR-SHAVPERLYIV  212 (286)
T ss_dssp             HHH-TTSCCCSEEEE
T ss_pred             hhh-ccCCCCceEEE
Confidence            763 22344666654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.71  E-value=9.4e-17  Score=147.71  Aligned_cols=206  Identities=13%  Similarity=0.038  Sum_probs=140.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHh-----hhcCCCCceEEeccCCChHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA-----KTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++||||||+|.||.+++++|.+.|++|++++|+........+..+.+...     ......++.++.+|+++++.+.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            479999999999999999999999999999999877544444433333221     1113568999999999987776  


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC------
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH------  190 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~------  190 (272)
                            ...++|+|||||+....        ..++...+++|+.++.++++++..   ...++|++||... ..      
T Consensus       228 ------~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~v-G~~~~~~~  289 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTYFDIDT  289 (508)
T ss_dssp             ------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCT-TSEECTTC
T ss_pred             ------CccCCCEEEECCceecC--------CCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhh-ccCCccCC
Confidence                  34689999999997531        234567789999999999999876   4568999999876 11      


Q ss_pred             ----------------C-hh------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH--------HHHHhhc--cCC
Q 039897          191 ----------------S-PE------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQFG--SEV  237 (272)
Q Consensus       191 ----------------~-~~------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~--------~~~~~~~--~~~  237 (272)
                                      . ..      +..+..++.+.|++++.+.||.|..+.....+..        .......  ...
T Consensus       290 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  369 (508)
T 4f6l_B          290 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCI  369 (508)
T ss_dssp             SCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEE
T ss_pred             cCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCC
Confidence                            0 01      3344455556899999999999987754332110        1111111  111


Q ss_pred             CC------CCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          238 PM------KRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       238 ~~------~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +.      ..+.+.+|+|+++++++... .   .|+++++
T Consensus       370 ~~~~g~~~~~~v~v~DvA~ai~~~~~~~-~---~~~~~nl  405 (508)
T 4f6l_B          370 GVSMAEMPVDFSFVDTTARQIVALAQVN-T---PQIIYHV  405 (508)
T ss_dssp             ETTGGGSEEECEEHHHHHHHHHHHTTBC-C---SCSEEEE
T ss_pred             CCCccCceEEEEcHHHHHHHHHHHHhCC-C---CCCEEEe
Confidence            11      12456799999999998765 2   6777765

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.69  E-value=1.2e-16  Score=137.94  Aligned_cols=197  Identities=14%  Similarity=0.111  Sum_probs=131.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +||||||+|+||++++++|+++  |++|++++|+....                  .++.++.+|+++.+++.++++.  
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------------~~~~~~~~D~~d~~~~~~~~~~--   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------------GGIKFITLDVSNRDEIDRAVEK--   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------------TTCCEEECCTTCHHHHHHHHHH--
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------------cCceEEEecCCCHHHHHHHHhh--
Confidence            4899999999999999999999  89999999874331                  1356889999999998888764  


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC----------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS----------  191 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~----------  191 (272)
                         .++|+|||+|+....      ...+++...+++|+.++.++++++...  ..++||++||...+...          
T Consensus        61 ---~~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~  129 (317)
T 3ajr_A           61 ---YSIDAIFHLAGILSA------KGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVIPSTIGVFGPETPKNKVPSIT  129 (317)
T ss_dssp             ---TTCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCTTSCSSSBCSSS
T ss_pred             ---cCCcEEEECCcccCC------ccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCCCCCCccccc
Confidence               279999999997431      123566788999999999999998763  23599999998655431          


Q ss_pred             ---hh-----HH----HHHHHHh-hCCeEEEEEecccccCCCC-CCCC-CH----HHHHhhccC--------CCCCCCCC
Q 039897          192 ---PE-----AR----GLALQLV-ERGIRVNGVAPGPIWTPLI-PSSF-SE----EESAQFGSE--------VPMKRAGQ  244 (272)
Q Consensus       192 ---~~-----~~----~la~e~~-~~gi~vn~i~PG~v~t~~~-~~~~-~~----~~~~~~~~~--------~~~~~~~~  244 (272)
                         +.     +|    .+...+. ..|++++.+.|+.+..+.. .... ..    .........        .....+.+
T Consensus       130 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  209 (317)
T 3ajr_A          130 ITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMY  209 (317)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEE
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeE
Confidence               11     22    2333332 3589999998665544321 1110 01    111111111        01112346


Q ss_pred             ccchhhhhhhhhccCCCCcccceeecc
Q 039897          245 PIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       245 ~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .+|+|++++.++..+.....+|+++++
T Consensus       210 v~Dva~a~~~~l~~~~~~~~~g~~~~i  236 (317)
T 3ajr_A          210 MPDALKALVDLYEADRDKLVLRNGYNV  236 (317)
T ss_dssp             HHHHHHHHHHHHHCCGGGCSSCSCEEC
T ss_pred             HHHHHHHHHHHHhCCccccccCceEec
Confidence            789999999888654122334677765

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.68  E-value=1.3e-16  Score=135.86  Aligned_cols=182  Identities=12%  Similarity=0.040  Sum_probs=127.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||+|+||++++++|+++|++|++++|.                            ++|+++.+++.++++..  
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~D~~d~~~~~~~~~~~--   55 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------------LLDITNISQVQQVVQEI--   55 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------------TSCTTCHHHHHHHHHHH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------------ccCCCCHHHHHHHHHhc--
Confidence            389999999999999999999999999999882                            37999999998888765  


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----------  192 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  192 (272)
                         ++|+|||+|+....     ....+++...+++|+.++.++++++...   +.+||++||...+....          
T Consensus        56 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~vy~~~~~~~~~E~~~~  124 (287)
T 3sc6_A           56 ---RPHIIIHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV---GAKLVYISTDYVFQGDRPEGYDEFHNP  124 (287)
T ss_dssp             ---CCSEEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCCCCSSCBCTTSCC
T ss_pred             ---CCCEEEECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchhhhcCCCCCCCCCCCCCC
Confidence               79999999998532     1122466888999999999999998753   34899999976553321          


Q ss_pred             -----h--HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHhhccCC-------CCCCCCCccchhhhhhhhhc
Q 039897          193 -----E--ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-------PMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 -----~--~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~~L~s  257 (272)
                           .  +|..+.++.. .+.+++.+.|+.+..+.... +............       ....+.+++|+|+++++++.
T Consensus       125 ~p~~~Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  203 (287)
T 3sc6_A          125 APINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNN-FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIH  203 (287)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCC-HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCc-HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHh
Confidence                 1  3333333222 13356889999998765322 1112222111111       22345568999999999997


Q ss_pred             cCCCCcccceeecc
Q 039897          258 NHCSSYITGQVLHP  271 (272)
Q Consensus       258 ~~~~~~~tG~~i~i  271 (272)
                      .. .    |+++++
T Consensus       204 ~~-~----~~~~~i  212 (287)
T 3sc6_A          204 TS-L----YGTYHV  212 (287)
T ss_dssp             SC-C----CEEEEC
T ss_pred             CC-C----CCeEEE
Confidence            65 2    556655

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.68  E-value=3.8e-16  Score=134.98  Aligned_cols=182  Identities=13%  Similarity=0.070  Sum_probs=125.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |.+++||||||+|+||++++++|+++|++|+++.|+.                           .+|+++.+++.++++.
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------~~D~~d~~~~~~~~~~   53 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFAS   53 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------cCCccCHHHHHHHHHh
Confidence            3468999999999999999999999999998876641                           3699999988888765


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC---------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH---------  190 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~---------  190 (272)
                      .     ++|+|||+|+....    .....++....+++|+.++.++++++...  ..+++|++||...+..         
T Consensus        54 ~-----~~d~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~  122 (321)
T 1e6u_A           54 E-----RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAKQPMAES  122 (321)
T ss_dssp             H-----CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCCSSBCGG
T ss_pred             c-----CCCEEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccHHHcCCCCCCCcCcc
Confidence            3     69999999997421    11234456788999999999999998763  2359999999765421         


Q ss_pred             -------Ch----h--HHH----HHHHHhh-CCeEEEEEecccccCCCCCCC-----CCHHHHHhhc-------------
Q 039897          191 -------SP----E--ARG----LALQLVE-RGIRVNGVAPGPIWTPLIPSS-----FSEEESAQFG-------------  234 (272)
Q Consensus       191 -------~~----~--~~~----la~e~~~-~gi~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~-------------  234 (272)
                             .+    .  ++.    +..++.. .|++++.+.||.+..+.....     ..........             
T Consensus       123 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  202 (321)
T 1e6u_A          123 ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVW  202 (321)
T ss_dssp             GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             ccccCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEc
Confidence                   11    1  222    2233322 389999999999988764321     1111111110             


Q ss_pred             -cCCCCCCCCCccchhhhhhhhhccC
Q 039897          235 -SEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       235 -~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                       .......+.+.+|+|++++.++...
T Consensus       203 ~~g~~~~~~i~v~Dva~~~~~~~~~~  228 (321)
T 1e6u_A          203 GSGTPMREFLHVDDMAAASIHVMELA  228 (321)
T ss_dssp             SCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeEEHHHHHHHHHHHHhCc
Confidence             1111223457899999999988654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.67  E-value=2.7e-16  Score=135.03  Aligned_cols=197  Identities=13%  Similarity=0.093  Sum_probs=129.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +||||||+|+||++++++|+++| ++|++++|+..... ..    .+.      .  +. +.+|+++.+.++++++... 
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~----~~~------~--~~-~~~d~~~~~~~~~~~~~~~-   65 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV----NLV------D--LN-IADYMDKEDFLIQIMAGEE-   65 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GH----HHH------T--SC-CSEEEEHHHHHHHHHTTCC-
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hh----hcC------c--ce-eccccccHHHHHHHHhccc-
Confidence            48999999999999999999999 89999988754321 11    111      1  12 6789988877776664110 


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh----------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP----------  192 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  192 (272)
                       ++++|+|||+||....       ..+++...+++|+.++.++++++...  .. ++|++||.+.+....          
T Consensus        66 -~~~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~~~~~~~E~~~~  134 (310)
T 1eq2_A           66 -FGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYE  134 (310)
T ss_dssp             -CSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGTTCCSCBCSSGGGC
T ss_pred             -cCCCcEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhCCCCCCCCCCCCCC
Confidence             1369999999997432       22345778999999999999998764  23 999999975442211          


Q ss_pred             -----h------HHHHHHHHh-hCCeEEEEEecccccCCCCCC-----CCCHHHHHhh---------ccCCC-CCCCCCc
Q 039897          193 -----E------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPS-----SFSEEESAQF---------GSEVP-MKRAGQP  245 (272)
Q Consensus       193 -----~------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~-----~~~~~~~~~~---------~~~~~-~~~~~~~  245 (272)
                           .      +..+..++. ..|++++.+.||.+.++....     ..........         ..... ...+.+.
T Consensus       135 ~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v  214 (310)
T 1eq2_A          135 KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  214 (310)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEH
Confidence                 1      233333443 358999999999998876421     1111111111         11112 3345678


Q ss_pred             cchhhhhhhhhccCCCCcccceeecc
Q 039897          246 IEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       246 ~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +|+|++++.++... .    |+++++
T Consensus       215 ~Dva~~~~~~~~~~-~----~~~~~i  235 (310)
T 1eq2_A          215 GDVADVNLWFLENG-V----SGIFNL  235 (310)
T ss_dssp             HHHHHHHHHHHHHC-C----CEEEEE
T ss_pred             HHHHHHHHHHHhcC-C----CCeEEE
Confidence            99999999998765 2    667665

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.66  E-value=1.7e-16  Score=135.87  Aligned_cols=188  Identities=12%  Similarity=0.023  Sum_probs=128.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|+||++++++|+ +|++|++++|+.                        .++.+|+++.+++.++++..   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~------------------------~~~~~D~~d~~~~~~~~~~~---   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHS------------------------KEFCGDFSNPKGVAETVRKL---   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC------------------------SSSCCCTTCHHHHHHHHHHH---
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEecccc------------------------ccccccCCCHHHHHHHHHhc---
Confidence            69999999999999999999 899999998863                        13578999999888887753   


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-----------  192 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-----------  192 (272)
                        ++|+|||+||.....     ...+++...+++|+.++.++++++...   +.++|++||...+....           
T Consensus        54 --~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~vy~~~~~~~~~E~~~~~  123 (299)
T 1n2s_A           54 --RPDVIVNAAAHTAVD-----KAESEPELAQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTGDIPWQETDATS  123 (299)
T ss_dssp             --CCSEEEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCTTCCBCTTSCCC
T ss_pred             --CCCEEEECcccCCHh-----hhhcCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEecccEEeCCCCCCCCCCCCCC
Confidence              699999999974311     122355778999999999999988643   34899999976543221           


Q ss_pred             ----h--HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHHHhhccCC-------CCCCCCCccchhhhhhhhhcc
Q 039897          193 ----E--ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-------PMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       193 ----~--~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~~L~s~  258 (272)
                          .  +|..+.++.. ...+++.+.|+.+.++.... .............       ....+.+++|+|+++++++..
T Consensus       124 p~~~Y~~sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          124 PLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNN-FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (299)
T ss_dssp             CSSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCC-HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHhCCCeEEEeeeeecCCCcCc-HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence                1  3333333322 23478999999998876431 1111111111111       123345689999999999865


Q ss_pred             CCCCcc-cceeecc
Q 039897          259 HCSSYI-TGQVLHP  271 (272)
Q Consensus       259 ~~~~~~-tG~~i~i  271 (272)
                      . .... .|+++++
T Consensus       203 ~-~~~~~~~~~~~i  215 (299)
T 1n2s_A          203 A-LNKPEVAGLYHL  215 (299)
T ss_dssp             H-HHCGGGCEEEEC
T ss_pred             h-ccccccCceEEE
Confidence            3 1122 4677765

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.65  E-value=3.4e-17  Score=141.34  Aligned_cols=195  Identities=13%  Similarity=0.010  Sum_probs=122.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch----hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE----EKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      .++++++||||||+|+||++++++|+++|++|++++|+...    ...+..         .....++.++.+|++     
T Consensus         3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~~~~Dl~-----   68 (321)
T 3vps_A            3 RNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------FLEKPVLELEERDLS-----   68 (321)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE---------EECSCGGGCCHHHHT-----
T ss_pred             cccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh---------hccCCCeeEEeCccc-----
Confidence            34678999999999999999999999999999999997541    111100         001234455555554     


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-  192 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-  192 (272)
                                  ++|+|||+|+......     ..++....++ |+.++.++++++...-  -.+||++||...+.... 
T Consensus        69 ------------~~d~vi~~a~~~~~~~-----~~~~~~~~~~-n~~~~~~ll~a~~~~~--v~~~v~~SS~~v~~~~~~  128 (321)
T 3vps_A           69 ------------DVRLVYHLASHKSVPR-----SFKQPLDYLD-NVDSGRHLLALCTSVG--VPKVVVGSTCEVYGQADT  128 (321)
T ss_dssp             ------------TEEEEEECCCCCCHHH-----HTTSTTTTHH-HHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCSS
T ss_pred             ------------cCCEEEECCccCChHH-----HHhCHHHHHH-HHHHHHHHHHHHHHcC--CCeEEEecCHHHhCCCCC
Confidence                        7999999999753210     0111123456 9999999999987642  35999999976543211 


Q ss_pred             --------------h--H----HHHHHHHhh-CCe-EEEEEecccccCCCCCCCC-CHHHHHhh---------ccCCCCC
Q 039897          193 --------------E--A----RGLALQLVE-RGI-RVNGVAPGPIWTPLIPSSF-SEEESAQF---------GSEVPMK  240 (272)
Q Consensus       193 --------------~--~----~~la~e~~~-~gi-~vn~i~PG~v~t~~~~~~~-~~~~~~~~---------~~~~~~~  240 (272)
                                    .  +    ..+..++.. .|+ +++.+.|+.+..+...... ........         .......
T Consensus       129 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (321)
T 3vps_A          129 LPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRR  208 (321)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEE
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceE
Confidence                          1  2    333344443 589 9999999999887643311 11111111         1111223


Q ss_pred             CCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          241 RAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       241 ~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .+.+.+|+|+++++++... ..   | ++++
T Consensus       209 ~~v~v~Dva~~~~~~~~~~-~~---g-~~~i  234 (321)
T 3vps_A          209 DFTYITDVVDKLVALANRP-LP---S-VVNF  234 (321)
T ss_dssp             CEEEHHHHHHHHHHGGGSC-CC---S-EEEE
T ss_pred             ceEEHHHHHHHHHHHHhcC-CC---C-eEEe
Confidence            4558899999999999765 22   6 6654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.65  E-value=6.3e-16  Score=132.48  Aligned_cols=195  Identities=11%  Similarity=0.086  Sum_probs=124.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +|+||||||+|+||++++++|+++| ++|++++|++.....     ..+.      ..++.++.+|++|++++.++++  
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-----~~l~------~~~~~~~~~D~~d~~~l~~~~~--   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-----KELR------LQGAEVVQGDQDDQVIMELALN--   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-----HHHH------HTTCEEEECCTTCHHHHHHHHT--
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-----HHHH------HCCCEEEEecCCCHHHHHHHHh--
Confidence            5799999999999999999999999 999999998554211     1111      1347889999999988887764  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc------CChh-
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW------HSPE-  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~------~~~~-  193 (272)
                           ++|+||||++.....      .       .+.|+.+..++++++...  ..++||++|+.....      ..+. 
T Consensus        72 -----~~d~vi~~a~~~~~~------~-------~~~~~~~~~~~~~aa~~~--gv~~iv~~S~~~~~~~~~~~~~~~y~  131 (299)
T 2wm3_A           72 -----GAYATFIVTNYWESC------S-------QEQEVKQGKLLADLARRL--GLHYVVYSGLENIKKLTAGRLAAAHF  131 (299)
T ss_dssp             -----TCSEEEECCCHHHHT------C-------HHHHHHHHHHHHHHHHHH--TCSEEEECCCCCHHHHTTTSCCCHHH
T ss_pred             -----cCCEEEEeCCCCccc------c-------chHHHHHHHHHHHHHHHc--CCCEEEEEcCccccccCCCcccCchh
Confidence                 699999999863211      1       234555666666665432  235899966654221      1111 


Q ss_pred             -HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCCHHHHHh--hccCCCC----CCCCCccchhhhhhhhhccCCCCccc
Q 039897          194 -ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEESAQ--FGSEVPM----KRAGQPIEVAPCYVFLACNHCSSYIT  265 (272)
Q Consensus       194 -~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~dva~~~~~L~s~~~~~~~t  265 (272)
                       .+....++. ..|++++.+.||.+.+++............  +.-..+.    ..+.+++|+|+++..++..+ . ...
T Consensus       132 ~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-~-~~~  209 (299)
T 2wm3_A          132 DGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMP-E-KYV  209 (299)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSH-H-HHT
T ss_pred             hHHHHHHHHHHHCCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcCh-h-hhC
Confidence             333333333 358999999999998875432111100000  0001121    23458899999999998753 1 235


Q ss_pred             ceeecc
Q 039897          266 GQVLHP  271 (272)
Q Consensus       266 G~~i~i  271 (272)
                      |+++++
T Consensus       210 g~~~~~  215 (299)
T 2wm3_A          210 GQNIGL  215 (299)
T ss_dssp             TCEEEC
T ss_pred             CeEEEe
Confidence            666665

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.64  E-value=3.8e-15  Score=142.02  Aligned_cols=165  Identities=18%  Similarity=0.152  Sum_probs=114.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ...+++|+||||||+|+||++++++|+++|++|++++|+........+.+..+      ...++.++.+|+++.+++.++
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~v~~v~~Dl~d~~~l~~~   79 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL------TKHHIPFYEVDLCDRKGLEKV   79 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH------HTSCCCEEECCTTCHHHHHHH
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc------cCCceEEEEcCCCCHHHHHHH
Confidence            35578899999999999999999999999999999998755432222222221      234678899999999988888


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-----
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-----  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-----  191 (272)
                      ++..     ++|+||||||.....     ...+...+.+++|+.++.++++++...  ..++||++||.+.+...     
T Consensus        80 ~~~~-----~~D~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~iV~~SS~~vyg~~~~~~~  147 (699)
T 1z45_A           80 FKEY-----KIDSVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVYGDATRFPN  147 (699)
T ss_dssp             HHHS-----CCCEEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCCGGGSTT
T ss_pred             HHhC-----CCCEEEECCcccCcC-----ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECcHHHhCCCccccc
Confidence            7642     799999999974311     112334567899999999999887643  23699999997644210     


Q ss_pred             --------------hh--HH----HHHHHHhh---CCeEEEEEecccccCC
Q 039897          192 --------------PE--AR----GLALQLVE---RGIRVNGVAPGPIWTP  219 (272)
Q Consensus       192 --------------~~--~~----~la~e~~~---~gi~vn~i~PG~v~t~  219 (272)
                                    +.  +|    .+..++..   .++++..+.|+.+..+
T Consensus       148 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          148 MIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             CCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECC
T ss_pred             cCCccccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCC
Confidence                          11  22    23333332   5899999999887654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.64  E-value=1.6e-16  Score=136.48  Aligned_cols=196  Identities=14%  Similarity=0.121  Sum_probs=129.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .|++++||||||+|.||++++++|+++|+      +...                  ....+.++.+|+++.+++.++++
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~------------------~~~~~~~~~~D~~d~~~~~~~~~   58 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE------------------DWVFVSSKDADLTDTAQTRALFE   58 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC------------------EEEECCTTTCCTTSHHHHHHHHH
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc------------------cccccCceecccCCHHHHHHHHh
Confidence            36789999999999999999999999997      1100                  11234456899999999888887


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC-------
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS-------  191 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~-------  191 (272)
                      ..     ++|+|||+|+....    ...+.++....+++|+.++.++++++...-  -.+||++||...+...       
T Consensus        59 ~~-----~~d~Vih~A~~~~~----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E  127 (319)
T 4b8w_A           59 KV-----QPTHVIHLAAMVGG----LFRNIKYNLDFWRKNVHMNDNVLHSAFEVG--ARKVVSCLSTCIFPDKTTYPIDE  127 (319)
T ss_dssp             HS-----CCSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSCSSCCSSBCG
T ss_pred             hc-----CCCEEEECceeccc----ccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEcchhhcCCCCCCCccc
Confidence            52     69999999998421    111223456779999999999999986542  3489999998543211       


Q ss_pred             -------------hh--HHHHH----HHHh-hCCeEEEEEecccccCCCCCCCC-----CHHHHHh----h--cc-----
Q 039897          192 -------------PE--ARGLA----LQLV-ERGIRVNGVAPGPIWTPLIPSSF-----SEEESAQ----F--GS-----  235 (272)
Q Consensus       192 -------------~~--~~~la----~e~~-~~gi~vn~i~PG~v~t~~~~~~~-----~~~~~~~----~--~~-----  235 (272)
                                   +.  +|..+    .++. ..|++++.+.|+.+..+......     .......    .  ..     
T Consensus       128 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (319)
T 4b8w_A          128 TMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVW  207 (319)
T ss_dssp             GGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             cccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEe
Confidence                         01  23332    2332 25899999999999887643211     0111111    1  11     


Q ss_pred             --CCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          236 --EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       236 --~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                        ......+.+.+|+|++++.++... . ...|+++++
T Consensus       208 ~~g~~~~~~i~v~Dva~a~~~~~~~~-~-~~~~~~~ni  243 (319)
T 4b8w_A          208 GTGNPRRQFIYSLDLAQLFIWVLREY-N-EVEPIILSV  243 (319)
T ss_dssp             SCSCCEECEEEHHHHHHHHHHHHHHC-C-CSSCEEECC
T ss_pred             CCCCeeEEEEeHHHHHHHHHHHHhcc-c-cCCceEEEe
Confidence              112223468899999999998763 1 234566654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.64  E-value=6.2e-16  Score=131.37  Aligned_cols=185  Identities=10%  Similarity=0.033  Sum_probs=122.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +||||||+|+||++++++|+++  |++|++++|++.....+.             ..++.++.+|++|++++.++++   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~---   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-------------AQGITVRQADYGDEAALTSALQ---   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-------------HTTCEEEECCTTCHHHHHHHTT---
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-------------cCCCeEEEcCCCCHHHHHHHHh---
Confidence            4899999999999999999998  999999999865432221             1246789999999988877664   


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC---ChhHHHHH
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH---SPEARGLA  198 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~---~~~~~~la  198 (272)
                          ++|+|||+|+...                 ..|+.++.++++++...  .-++||++||......   +...+..+
T Consensus        65 ----~~d~vi~~a~~~~-----------------~~~~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~~~y~~sK~~~  121 (286)
T 2zcu_A           65 ----GVEKLLLISSSEV-----------------GQRAPQHRNVINAAKAA--GVKFIAYTSLLHADTSPLGLADEHIET  121 (286)
T ss_dssp             ----TCSEEEECC-------------------------CHHHHHHHHHHHH--TCCEEEEEEETTTTTCCSTTHHHHHHH
T ss_pred             ----CCCEEEEeCCCCc-----------------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCCCcchhHHHHHHH
Confidence                6899999998621                 13677777887777543  2358999999866421   11244444


Q ss_pred             HHHh-hCCeEEEEEecccccCCCCCCCCCHHHHHh---hccCCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          199 LQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEESAQ---FGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       199 ~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .++. ..|++++.+.||++.+++.. .........   +........+.+++|+|+++++++..+ .  .+|+++++
T Consensus       122 e~~~~~~~~~~~ilrp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-~--~~g~~~~i  194 (286)
T 2zcu_A          122 EKMLADSGIVYTLLRNGWYSENYLA-SAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEA-G--HEGKVYEL  194 (286)
T ss_dssp             HHHHHHHCSEEEEEEECCBHHHHHT-THHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSS-S--CTTCEEEE
T ss_pred             HHHHHHcCCCeEEEeChHHhhhhHH-HhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCC-C--CCCceEEE
Confidence            4333 36899999999988665421 111111111   111122345678999999999999764 2  36777765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.64  E-value=4.5e-15  Score=130.30  Aligned_cols=199  Identities=13%  Similarity=0.068  Sum_probs=135.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC-----CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEG-----ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G-----~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +++||||||+|.||++++++|+++|     ++|++++|+.....              ....++.++.+|+++.+++.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------------~~~~~~~~~~~Dl~d~~~~~~~   66 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------------HEDNPINYVQCDISDPDDSQAK   66 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------------CCSSCCEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------------cccCceEEEEeecCCHHHHHHH
Confidence            5789999999999999999999999     99999999755422              0245688899999999888777


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEE-------EecCCCCcc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAII-------NTTSVEPLW  189 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv-------~vsS~~~~~  189 (272)
                      ++.    .+.+|+|||+|+...          .+....+++|+.++.++++++.+....-.++|       ++||.+.+.
T Consensus        67 ~~~----~~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg  132 (364)
T 2v6g_A           67 LSP----LTDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYG  132 (364)
T ss_dssp             HTT----CTTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTT
T ss_pred             Hhc----CCCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhcc
Confidence            652    224999999999742          13467889999999999999987532334666       688764332


Q ss_pred             CC--------------h------hHHHHHHHHhh-CC-eEEEEEecccccCCCCCCCCCH---H-HHHhh----ccCCC-
Q 039897          190 HS--------------P------EARGLALQLVE-RG-IRVNGVAPGPIWTPLIPSSFSE---E-ESAQF----GSEVP-  238 (272)
Q Consensus       190 ~~--------------~------~~~~la~e~~~-~g-i~vn~i~PG~v~t~~~~~~~~~---~-~~~~~----~~~~~-  238 (272)
                      ..              +      .+..+..++.+ .| +++..+.|+.+..+........   . ....+    ..... 
T Consensus       133 ~~~~~~~~~~E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  212 (364)
T 2v6g_A          133 KIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRF  212 (364)
T ss_dssp             TSCCCCSSBCTTSCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCC
T ss_pred             ccccCCCCCCccccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceec
Confidence            21              1      03445555554 45 9999999999988765322221   0 11111    11111 


Q ss_pred             CC------CCCC---ccchhhhhhhhhccCCCCcccceeecc
Q 039897          239 MK------RAGQ---PIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       239 ~~------~~~~---~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      .+      .+.+   .+|+|++++.++...   ...|+++++
T Consensus       213 ~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~---~~~g~~~ni  251 (364)
T 2v6g_A          213 TGCKAAWDGYSDCSDADLIAEHHIWAAVDP---YAKNEAFNV  251 (364)
T ss_dssp             CSCHHHHHSCBCCEEHHHHHHHHHHHHHCG---GGTTEEEEE
T ss_pred             CCCcccccccCCCCcHHHHHHHHHHHHhCC---CCCCceEEe
Confidence            11      1123   377999999988654   235777765

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.63  E-value=6e-15  Score=129.04  Aligned_cols=187  Identities=13%  Similarity=0.084  Sum_probs=122.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |..++||||||+|.||++++++|++.|++|++++|+........+.+..+.      ..++.++.+|++|.+++.+++++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~------~~~v~~~~~Dl~d~~~l~~~~~~   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE------DKGAIIVYGLINEQEAMEKILKE   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH------HTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH------hCCcEEEEeecCCHHHHHHHHhh
Confidence            446799999999999999999999999999999998633222222233332      34688999999999998888865


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-----Chh-
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-----SPE-  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-----~~~-  193 (272)
                           .++|+|||+++..                    |+.++.++++++...- .-.++|+ |+......     .+. 
T Consensus        82 -----~~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~e~~~~~p~~  134 (346)
T 3i6i_A           82 -----HEIDIVVSTVGGE--------------------SILDQIALVKAMKAVG-TIKRFLP-SEFGHDVNRADPVEPGL  134 (346)
T ss_dssp             -----TTCCEEEECCCGG--------------------GGGGHHHHHHHHHHHC-CCSEEEC-SCCSSCTTTCCCCTTHH
T ss_pred             -----CCCCEEEECCchh--------------------hHHHHHHHHHHHHHcC-CceEEee-cccCCCCCccCcCCCcc
Confidence                 2799999999872                    7888888888886542 1235664 44322111     111 


Q ss_pred             ----HHHHHHHH-hhCCeEEEEEecccccCCCCCCCCCHHH-------HHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ----ARGLALQL-VERGIRVNGVAPGPIWTPLIPSSFSEEE-------SAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ----~~~la~e~-~~~gi~vn~i~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                          .+..+.++ ...|+++..+.||.+...+.........       ...+........+.+.+|+|++++.++..+
T Consensus       135 ~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          135 NMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred             hHHHHHHHHHHHHHHcCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence                33333333 3478999999999887765432211110       001111222334668899999999998764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.60  E-value=6.4e-15  Score=129.40  Aligned_cols=196  Identities=13%  Similarity=0.021  Sum_probs=124.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEecc-CCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISAD-LGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~  118 (272)
                      +.+++||||||+|+||++++++|+++|++|++++|+.....     ...+.     ...++.++.+| ++|.+++.++++
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~~l~-----~~~~v~~v~~D~l~d~~~l~~~~~   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-----AEELQ-----AIPNVTLFQGPLLNNVPLMDTLFE   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-----HHHHH-----TSTTEEEEESCCTTCHHHHHHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-----HHHHh-----hcCCcEEEECCccCCHHHHHHHHh
Confidence            34688999999999999999999999999999999865431     11121     22467888999 999998887764


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC-CccC------C
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE-PLWH------S  191 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~-~~~~------~  191 (272)
                             ++|+||||++....                +.|..+ .++++++...- +-++||++||.. ...+      +
T Consensus        73 -------~~d~Vi~~a~~~~~----------------~~~~~~-~~l~~aa~~~g-~v~~~V~~SS~~~~~~~~~~~~~y  127 (352)
T 1xgk_A           73 -------GAHLAFINTTSQAG----------------DEIAIG-KDLADAAKRAG-TIQHYIYSSMPDHSLYGPWPAVPM  127 (352)
T ss_dssp             -------TCSEEEECCCSTTS----------------CHHHHH-HHHHHHHHHHS-CCSEEEEEECCCGGGTSSCCCCTT
T ss_pred             -------cCCEEEEcCCCCCc----------------HHHHHH-HHHHHHHHHcC-CccEEEEeCCccccccCCCCCccH
Confidence                   58999999976310                225555 66666554321 025999999986 2221      1


Q ss_pred             hhHHHHHHHHhh-CCeEEEEEecccccCCCCCCC---CCHH--HHHhh-----ccCCCCCCCCCc-cchhhhhhhhhccC
Q 039897          192 PEARGLALQLVE-RGIRVNGVAPGPIWTPLIPSS---FSEE--ESAQF-----GSEVPMKRAGQP-IEVAPCYVFLACNH  259 (272)
Q Consensus       192 ~~~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~---~~~~--~~~~~-----~~~~~~~~~~~~-~dva~~~~~L~s~~  259 (272)
                      ..+|..+.++.. .|++++.|.||++.+......   +...  .....     ...-....+.++ +|+|++++.++.+.
T Consensus       128 ~~sK~~~E~~~~~~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~  207 (352)
T 1xgk_A          128 WAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  207 (352)
T ss_dssp             THHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCC
Confidence            125555555443 489999999998755432110   0000  00000     000011124467 89999999998753


Q ss_pred             CCCcccceeecc
Q 039897          260 CSSYITGQVLHP  271 (272)
Q Consensus       260 ~~~~~tG~~i~i  271 (272)
                       .....|+++++
T Consensus       208 -~~~~~g~~~~l  218 (352)
T 1xgk_A          208 -PQKWNGHRIAL  218 (352)
T ss_dssp             -HHHHTTCEEEE
T ss_pred             -chhhCCeEEEE
Confidence             22345777765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.56  E-value=1.9e-14  Score=132.53  Aligned_cols=181  Identities=14%  Similarity=0.079  Sum_probs=120.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +++||||||+|.||.+++++|+++|++|++++|+....                     ..+.+|+.+..         .
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------------~~v~~d~~~~~---------~  196 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------------GKRFWDPLNPA---------S  196 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------------TCEECCTTSCC---------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------------cceeecccchh---------H
Confidence            57999999999999999999999999999999975431                     12567776421         2


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--------  193 (272)
                      +.+.++|+|||+|+.... .   ....+.....+++|+.++.++++++... ...++||++||...+.....        
T Consensus       197 ~~l~~~D~Vih~A~~~~~-~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~~~~~~~~E~~  271 (516)
T 3oh8_A          197 DLLDGADVLVHLAGEPIF-G---RFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHDRGDEILTEES  271 (516)
T ss_dssp             TTTTTCSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSEEEEEEECTTS
T ss_pred             HhcCCCCEEEECCCCccc-c---ccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCCCCCCccCCCC
Confidence            233579999999997432 1   3345667888999999999999975432 22368999999765541100        


Q ss_pred             ---------H----HHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhcc--------CCCCCCCCCccchhhhh
Q 039897          194 ---------A----RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS--------EVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 ---------~----~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~dva~~~  252 (272)
                               .    ..+..+....|++++.+.||.+.++..  ............        ......+.+.+|+|+++
T Consensus       272 ~~~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai  349 (516)
T 3oh8_A          272 ESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIY  349 (516)
T ss_dssp             CCCSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHH
T ss_pred             CCCcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHH
Confidence                     1    122233446799999999999988752  111111111111        11112345779999999


Q ss_pred             hhhhccC
Q 039897          253 VFLACNH  259 (272)
Q Consensus       253 ~~L~s~~  259 (272)
                      ++++...
T Consensus       350 ~~~l~~~  356 (516)
T 3oh8_A          350 YRAIVDA  356 (516)
T ss_dssp             HHHHHCT
T ss_pred             HHHHhCc
Confidence            9998764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.55  E-value=4.3e-14  Score=121.23  Aligned_cols=181  Identities=11%  Similarity=0.071  Sum_probs=112.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch---h-hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE---E-KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +++|+||||+|+||++++++|+++|++|++++|+...   . ++... +..+.      ..++.++.+|++|.+++.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~------~~~v~~v~~D~~d~~~l~~~~   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQ------SLGVILLEGDINDHETLVKAI   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHH------HTTCEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHH------hCCCEEEEeCCCCHHHHHHHH
Confidence            4689999999999999999999999999999998511   0 22211 22222      234788999999998887776


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc------CC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW------HS  191 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~------~~  191 (272)
                      +       ++|+|||+++...                    +.+..++++++...- .-.++|+  |..+..      ..
T Consensus        75 ~-------~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~--S~~g~~~~~~~~~~  124 (307)
T 2gas_A           75 K-------QVDIVICAAGRLL--------------------IEDQVKIIKAIKEAG-NVKKFFP--SEFGLDVDRHDAVE  124 (307)
T ss_dssp             T-------TCSEEEECSSSSC--------------------GGGHHHHHHHHHHHC-CCSEEEC--SCCSSCTTSCCCCT
T ss_pred             h-------CCCEEEECCcccc--------------------cccHHHHHHHHHhcC-CceEEee--cccccCcccccCCC
Confidence            5       6999999998732                    334555666554321 0246763  333311      11


Q ss_pred             hh-----HHHHHHHH-hhCCeEEEEEecccccCCCCCCCCCH-------HHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          192 PE-----ARGLALQL-VERGIRVNGVAPGPIWTPLIPSSFSE-------EESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       192 ~~-----~~~la~e~-~~~gi~vn~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      +.     .+....++ ...|++++.+.||++.+.+.......       .....+........+.+++|+|++++.++.+
T Consensus       125 p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (307)
T 2gas_A          125 PVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAAND  204 (307)
T ss_dssp             THHHHHHHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTC
T ss_pred             cchhHHHHHHHHHHHHHHcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcC
Confidence            21     23333332 34589999999999887654221110       0000011111223456889999999999876


Q ss_pred             C
Q 039897          259 H  259 (272)
Q Consensus       259 ~  259 (272)
                      +
T Consensus       205 ~  205 (307)
T 2gas_A          205 P  205 (307)
T ss_dssp             G
T ss_pred             c
Confidence            4

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.53  E-value=6e-14  Score=119.19  Aligned_cols=180  Identities=10%  Similarity=-0.044  Sum_probs=114.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++|||||+ |.||++++++|+++|++|++++|+......+.             ..++.++.+|+++.+           
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------~~~~~~~~~D~~d~~-----------   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-------------ASGAEPLLWPGEEPS-----------   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-------------HTTEEEEESSSSCCC-----------
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-------------hCCCeEEEecccccc-----------
Confidence            68999998 99999999999999999999999865432221             235788999999833           


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                       ..++|+|||+|+.....      ..  .          ..++++++...-..-.++|++||...+.....         
T Consensus        61 -~~~~d~vi~~a~~~~~~------~~--~----------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~  121 (286)
T 3ius_A           61 -LDGVTHLLISTAPDSGG------DP--V----------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPL  121 (286)
T ss_dssp             -CTTCCEEEECCCCBTTB------CH--H----------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCC
T ss_pred             -cCCCCEEEECCCccccc------cH--H----------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCC
Confidence             45799999999975321      10  0          12334443332122368999999754432211         


Q ss_pred             --------HHHHHHHHhh--CCeEEEEEecccccCCCCCCC---CCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 --------ARGLALQLVE--RGIRVNGVAPGPIWTPLIPSS---FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 --------~~~la~e~~~--~gi~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                              +|..+.++..  .|++++.+.|+.+..+.....   ...... .....-....+.+.+|+|+++++++... 
T Consensus       122 ~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~a~~~~~~~~-  199 (286)
T 3ius_A          122 TPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIR-RIIKPGQVFSRIHVEDIAQVLAASMARP-  199 (286)
T ss_dssp             CCCSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTTSSSSCCC-EEECTTCCBCEEEHHHHHHHHHHHHHSC-
T ss_pred             CCCCHHHHHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHHHhcCCcc-ccCCCCcccceEEHHHHHHHHHHHHhCC-
Confidence                    3443433332  489999999999977643211   000000 0111112334567799999999999875 


Q ss_pred             CCcccceeecc
Q 039897          261 SSYITGQVLHP  271 (272)
Q Consensus       261 ~~~~tG~~i~i  271 (272)
                      .   .|+++++
T Consensus       200 ~---~g~~~~i  207 (286)
T 3ius_A          200 D---PGAVYNV  207 (286)
T ss_dssp             C---TTCEEEE
T ss_pred             C---CCCEEEE
Confidence            2   5777765

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.51  E-value=7.5e-14  Score=120.04  Aligned_cols=187  Identities=11%  Similarity=0.035  Sum_probs=116.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh-hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE-KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .++||||||+|+||++++++|+++|++|++++|+.... ....+.+..+      ...++.++.+|++|++++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~------~~~~~~~~~~D~~d~~~l~~~~~--   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF------KQLGAKLIEASLDDHQRLVDALK--   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH------HTTTCEEECCCSSCHHHHHHHHT--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH------HhCCeEEEeCCCCCHHHHHHHHh--
Confidence            46899999999999999999999999999999985431 1111112222      13457889999999988887764  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC------Ch--
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH------SP--  192 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~------~~--  192 (272)
                           ++|+|||+++.....                .|+.+..++++++...- .-++||+ |+......      .+  
T Consensus        76 -----~~d~vi~~a~~~~~~----------------~~~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~~~~~~~~p~~  132 (313)
T 1qyd_A           76 -----QVDVVISALAGGVLS----------------HHILEQLKLVEAIKEAG-NIKRFLP-SEFGMDPDIMEHALQPGS  132 (313)
T ss_dssp             -----TCSEEEECCCCSSSS----------------TTTTTHHHHHHHHHHSC-CCSEEEC-SCCSSCTTSCCCCCSSTT
T ss_pred             -----CCCEEEECCccccch----------------hhHHHHHHHHHHHHhcC-CCceEEe-cCCcCCccccccCCCCCc
Confidence                 699999999974321                26777777777775421 1247774 43221100      11  


Q ss_pred             ---hHHHHHHHH-hhCCeEEEEEecccccCCCCCCCCCH--------HHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          193 ---EARGLALQL-VERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       193 ---~~~~la~e~-~~~gi~vn~i~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                         ..+..+.++ ...|++++.+.||++.+.+.......        .....+........+.+++|+|+++..++.++
T Consensus       133 ~~y~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~  211 (313)
T 1qyd_A          133 ITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP  211 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred             chHHHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCc
Confidence               133333333 34689999999998865432211110        00000111111223467899999999998754

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.48  E-value=2.4e-13  Score=116.64  Aligned_cols=183  Identities=12%  Similarity=0.086  Sum_probs=112.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh--hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE--KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .++|+||||+|+||++++++|+++|++|++++|+....  ....+.+..+      ...++.++.+|++|.+++.++++ 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l------~~~~v~~v~~D~~d~~~l~~~~~-   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF------KASGANIVHGSIDDHASLVEAVK-   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH------HTTTCEEECCCTTCHHHHHHHHH-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH------HhCCCEEEEeccCCHHHHHHHHc-
Confidence            46899999999999999999999999999999975432  1111222222      13467889999999988887775 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-----Chh-
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-----SPE-  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-----~~~-  193 (272)
                            ++|+|||+++...                    +.+..++++++...- .-++||+ |+......     .+. 
T Consensus        77 ------~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~~~~~~~p~~  128 (308)
T 1qyc_A           77 ------NVDVVISTVGSLQ--------------------IESQVNIIKAIKEVG-TVKRFFP-SEFGNDVDNVHAVEPAK  128 (308)
T ss_dssp             ------TCSEEEECCCGGG--------------------SGGGHHHHHHHHHHC-CCSEEEC-SCCSSCTTSCCCCTTHH
T ss_pred             ------CCCEEEECCcchh--------------------hhhHHHHHHHHHhcC-CCceEee-cccccCccccccCCcch
Confidence                  5999999998732                    234455555554321 1246763 44321110     121 


Q ss_pred             ----HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCC-------HHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ----ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFS-------EEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ----~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                          .+....++. ..|++++.+.||++.+.+......       ......+........+.+++|+|++++.++.++
T Consensus       129 ~~y~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  206 (308)
T 1qyc_A          129 SVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP  206 (308)
T ss_dssp             HHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred             hHHHHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCc
Confidence                233333332 358999999999876543221110       000001111112233457899999999998754

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.47  E-value=7.9e-14  Score=122.96  Aligned_cols=178  Identities=12%  Similarity=0.049  Sum_probs=119.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ++||||||+|.||++++++|+++|+ +|+.++|+                                ++.+++.++++   
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------------~d~~~l~~~~~---   45 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------------TKEEELESALL---   45 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------------CCHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------------CCHHHHHHHhc---
Confidence            3699999999999999999999998 77766552                                56677777765   


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--HHH---
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--ARG---  196 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--~~~---  196 (272)
                          ++|+|||+||.....         +....+++|+.++.++++++... ....++|++||.......+.  +|.   
T Consensus        46 ----~~d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E  111 (369)
T 3st7_A           46 ----KADFIVHLAGVNRPE---------HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQDNPYGESKLQGE  111 (369)
T ss_dssp             ----HCSEEEECCCSBCTT---------CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGSCSHHHHHHHHHH
T ss_pred             ----cCCEEEECCcCCCCC---------CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcCCCCchHHHHHHH
Confidence                499999999985421         22345788999999999988542 11248999999876654443  333   


Q ss_pred             -HHHHHhh-CCeEEEEEecccccCCCCCCCCC---HHHHHhhccC--CCC------CCCCCccchhhhhhhhhccCCCCc
Q 039897          197 -LALQLVE-RGIRVNGVAPGPIWTPLIPSSFS---EEESAQFGSE--VPM------KRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       197 -la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~--~~~------~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                       +..++.+ .|+++..+.|+.+..+.......   ..........  ...      ..+.+.+|+|++++.++... .. 
T Consensus       112 ~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~-  189 (369)
T 3st7_A          112 QLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT-PT-  189 (369)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTC-CC-
T ss_pred             HHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCC-cc-
Confidence             3333333 48999999999998775433211   1111111111  111      12446889999999999765 22 


Q ss_pred             ccceeecc
Q 039897          264 ITGQVLHP  271 (272)
Q Consensus       264 ~tG~~i~i  271 (272)
                      ..|+++++
T Consensus       190 ~~~~~~~i  197 (369)
T 3st7_A          190 IENGVPTV  197 (369)
T ss_dssp             EETTEECC
T ss_pred             cCCceEEe
Confidence            23566554

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.46  E-value=1.9e-12  Score=110.71  Aligned_cols=181  Identities=16%  Similarity=0.083  Sum_probs=116.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|-||++++++|.++|++|+++.|++...                      .+..|     .   +   ..+.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------------------~~~~~-----~---~---~~~~   48 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------------------RITWD-----E---L---AASG   48 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------------------EEEHH-----H---H---HHHC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------------------eeecc-----h---h---hHhh
Confidence            699999999999999999999999999998864321                      12221     1   1   1123


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  193 (272)
                      ...+|.|||+|+... ..+....+.......++.|+.++.++.+++...-.+...+|+.||...+.....          
T Consensus        49 l~~~d~vihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~  127 (298)
T 4b4o_A           49 LPSCDAAVNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGG  127 (298)
T ss_dssp             CCSCSEEEECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCS
T ss_pred             ccCCCEEEEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcc
Confidence            468999999998532 233444567777888999999999999887665444456888888655433221          


Q ss_pred             -----H-----HHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHH-HHhhcc------CCCCCCCCCccchhhhhhhhh
Q 039897          194 -----A-----RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGS------EVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 -----~-----~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~dva~~~~~L~  256 (272)
                           .     ...+......++++..+.||.|..+.- ..+..-. ......      ......+.+.+|+++++.+++
T Consensus       128 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~-~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~  206 (298)
T 4b4o_A          128 DFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG-GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHAL  206 (298)
T ss_dssp             CSSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTS-HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCC-CchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHH
Confidence                 1     111122334689999999999977642 0000000 011111      111222346789999999998


Q ss_pred             ccC
Q 039897          257 CNH  259 (272)
Q Consensus       257 s~~  259 (272)
                      ..+
T Consensus       207 ~~~  209 (298)
T 4b4o_A          207 EAN  209 (298)
T ss_dssp             HCT
T ss_pred             hCC
Confidence            764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.44  E-value=4.5e-13  Score=115.71  Aligned_cols=191  Identities=11%  Similarity=0.100  Sum_probs=114.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc-chh-hhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS-QEE-KDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .++||||||+|+||++++++|+++|++|++++|+. ... ....+.+..+.      ..++.++.+|++|.+++.++++ 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~------~~~v~~v~~D~~d~~~l~~a~~-   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR------SMGVTIIEGEMEEHEKMVSVLK-   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH------HTTCEEEECCTTCHHHHHHHHT-
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh------cCCcEEEEecCCCHHHHHHHHc-
Confidence            35799999999999999999999999999999985 210 11111222221      2357889999999988887775 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc------CCh-
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW------HSP-  192 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~------~~~-  192 (272)
                            ++|+|||+++...                    +.+..++++++...- .-++|| . |..+..      ..+ 
T Consensus        77 ------~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v-~-S~~g~~~~~~~~~~p~  127 (321)
T 3c1o_A           77 ------QVDIVISALPFPM--------------------ISSQIHIINAIKAAG-NIKRFL-P-SDFGCEEDRIKPLPPF  127 (321)
T ss_dssp             ------TCSEEEECCCGGG--------------------SGGGHHHHHHHHHHC-CCCEEE-C-SCCSSCGGGCCCCHHH
T ss_pred             ------CCCEEEECCCccc--------------------hhhHHHHHHHHHHhC-CccEEe-c-cccccCccccccCCCc
Confidence                  5999999998732                    334455555554321 024676 2 433311      011 


Q ss_pred             ----hHHHHHHHHh-hCCeEEEEEecccccCCCCC---C----CCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          193 ----EARGLALQLV-ERGIRVNGVAPGPIWTPLIP---S----SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       193 ----~~~~la~e~~-~~gi~vn~i~PG~v~t~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                          ..+....++. ..|++++.+.||++...+..   .    .........+........+.+++|+|+++..++.++ 
T Consensus       128 ~~~y~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-  206 (321)
T 3c1o_A          128 ESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDP-  206 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCG-
T ss_pred             chHHHHHHHHHHHHHHcCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCc-
Confidence                1233333332 35789999999987543210   0    000000001111122234568899999999998764 


Q ss_pred             CCcccceeecc
Q 039897          261 SSYITGQVLHP  271 (272)
Q Consensus       261 ~~~~tG~~i~i  271 (272)
                      .  ..|+.+++
T Consensus       207 ~--~~g~~~~~  215 (321)
T 3c1o_A          207 R--CCNRIVIY  215 (321)
T ss_dssp             G--GTTEEEEC
T ss_pred             c--ccCeEEEE
Confidence            2  23555543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.43  E-value=4.4e-13  Score=115.63  Aligned_cols=179  Identities=12%  Similarity=0.117  Sum_probs=109.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .++||||||+|+||++++++|+++|++|++++|+......   .+..+.      ..++.++.+|++|.+++.++++   
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~l~------~~~v~~v~~Dl~d~~~l~~a~~---   78 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTT---LLDEFQ------SLGAIIVKGELDEHEKLVELMK---   78 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHH---HHHHHH------HTTCEEEECCTTCHHHHHHHHT---
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhh---HHHHhh------cCCCEEEEecCCCHHHHHHHHc---
Confidence            3679999999999999999999999999999998642111   111221      2347889999999988887775   


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC------Chh--
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH------SPE--  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~------~~~--  193 (272)
                          ++|+|||+++...                    +.+..++++++...- .-++||+ |+ .+...      .+.  
T Consensus        79 ----~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~-S~-~g~~~~~~~~~~p~~~  131 (318)
T 2r6j_A           79 ----KVDVVISALAFPQ--------------------ILDQFKILEAIKVAG-NIKRFLP-SD-FGVEEDRINALPPFEA  131 (318)
T ss_dssp             ----TCSEEEECCCGGG--------------------STTHHHHHHHHHHHC-CCCEEEC-SC-CSSCTTTCCCCHHHHH
T ss_pred             ----CCCEEEECCchhh--------------------hHHHHHHHHHHHhcC-CCCEEEe-ec-cccCcccccCCCCcch
Confidence                5999999998632                    233455555554321 0246764 43 33110      111  


Q ss_pred             ---HHHHHHHH-hhCCeEEEEEecccccCCCCC----CCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ---ARGLALQL-VERGIRVNGVAPGPIWTPLIP----SSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ---~~~la~e~-~~~gi~vn~i~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                         .+....++ ...|+++..+.||++...+..    ..........+........+.+++|+|+++..++..+
T Consensus       132 ~y~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (318)
T 2r6j_A          132 LIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDP  205 (318)
T ss_dssp             HHHHHHHHHHHHHHTTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCG
T ss_pred             hHHHHHHHHHHHHhcCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCc
Confidence               23333332 346899999999877543210    0000000000111112233567899999999998754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.36  E-value=6.5e-14  Score=119.54  Aligned_cols=111  Identities=19%  Similarity=0.173  Sum_probs=81.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|++|||||+||||+++++.|+++|++|++++|+.+..   .+..+++...     .++.++.+|+++++++.+++
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~---~~l~~~~~~~-----~~~~~~~~D~~~~~~~~~~~  186 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKA---QAAADSVNKR-----FKVNVTAAETADDASRAEAV  186 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHHHHH-----HTCCCEEEECCSHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHH---HHHHHHHHhc-----CCcEEEEecCCCHHHHHHHH
Confidence            457899999999999999999999999999999999985433   3333333321     13567889999998877766


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCH-HHHHHHHHhhhHHHH
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDE-ERLERVFRTNIFSHF  163 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~-~~~~~~~~~N~~~~~  163 (272)
                      +       .+|+||||+|......++.+.+. ++|..++++|+.+++
T Consensus       187 ~-------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          187 K-------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             T-------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             H-------hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            4       48999999986432223323333 555667888888877

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.23  E-value=1.4e-11  Score=100.51  Aligned_cols=151  Identities=11%  Similarity=0.079  Sum_probs=88.6

Q ss_pred             CCCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceE
Q 039897           39 KLRGKVALVTGG----------------DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA  102 (272)
Q Consensus        39 ~l~~k~vlVtGa----------------s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (272)
                      +|+||+||||||                |||||+++|+.|+++|++|++++++.. ..               ....  .
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------------~~~g--~   66 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------------TPPF--V   66 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------------CCTT--E
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------------cCCC--C
Confidence            589999999999                689999999999999999999987631 10               1111  2


Q ss_pred             EeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHH--HHhhhHHHHHHHHHHHhccc---cCC
Q 039897          103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV--FRTNIFSHFFMTRHSLRHMN---EGS  177 (272)
Q Consensus       103 ~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~--~~~N~~~~~~l~~~~~~~~~---~~g  177 (272)
                      -.+|+++   ++++++.+.+.++++|++|||||+.. ..++. ...+.+.+.  -+.++.-.+..+.-+++.+.   ..+
T Consensus        67 ~~~dv~~---~~~~~~~v~~~~~~~Dili~~Aav~d-~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~  141 (226)
T 1u7z_A           67 KRVDVMT---ALEMEAAVNASVQQQNIFIGCAAVAD-YRAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHR  141 (226)
T ss_dssp             EEEECCS---HHHHHHHHHHHGGGCSEEEECCBCCS-EEESS-CCSSCC-------CEEEEEEEECCCHHHHHHHCSSSC
T ss_pred             eEEccCc---HHHHHHHHHHhcCCCCEEEECCcccC-CCCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhhhcCC
Confidence            2457766   45677777888899999999999853 22321 111112220  01122112222222223332   123


Q ss_pred             eEEEecCCCCccCChhHHHHHHHHhhCCeEEEEEeccc
Q 039897          178 AIINTTSVEPLWHSPEARGLALQLVERGIRVNGVAPGP  215 (272)
Q Consensus       178 ~iv~vsS~~~~~~~~~~~~la~e~~~~gi~vn~i~PG~  215 (272)
                      .+ .++=.+-  ..........++.++|+.+...++-.
T Consensus       142 ~~-~VGFaaE--t~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          142 PY-VVGFAAE--TNNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             CE-EEEEEEE--SSSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             cE-EEEcchh--hchHHHHHHHHHHhcCCCEEEEeecc
Confidence            32 2221111  12246777788888888887777654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.08  E-value=1.2e-10  Score=95.33  Aligned_cols=91  Identities=18%  Similarity=0.183  Sum_probs=64.6

Q ss_pred             CCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEe
Q 039897           41 RGKVALVTGG----------------DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS  104 (272)
Q Consensus        41 ~~k~vlVtGa----------------s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (272)
                      +||+||||||                ||++|.++|+.|+++|++|+++++.......              ....+    
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~--------------~~~~~----   63 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE--------------PHPNL----   63 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC--------------CCTTE----
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------------CCCCe----
Confidence            5899999999                7889999999999999999999986421100              01122    


Q ss_pred             ccCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHH
Q 039897          105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL  151 (272)
Q Consensus       105 ~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~  151 (272)
                       |+.+.+++.++++.+.+.++.+|++|+||++.. +.+....+.+.+
T Consensus        64 -~~~~v~s~~em~~~v~~~~~~~Dili~aAAvsD-~~p~~~~~~e~~  108 (232)
T 2gk4_A           64 -SIREITNTKDLLIEMQERVQDYQVLIHSMAVSD-YTPVYMTGLEEV  108 (232)
T ss_dssp             -EEEECCSHHHHHHHHHHHGGGCSEEEECSBCCS-EEEEEEEEHHHH
T ss_pred             -EEEEHhHHHHHHHHHHHhcCCCCEEEEcCcccc-ccchhhcchhhh
Confidence             333334677888888888899999999999853 344443333433

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.89  E-value=4.6e-09  Score=84.22  Aligned_cols=103  Identities=15%  Similarity=0.183  Sum_probs=70.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|++||||||+||||.++++.+...|++|++++++.+..+.       ..+    .+.  . ..+|.++.+..+.+.+..
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~-------~~~----~g~--~-~~~d~~~~~~~~~~~~~~  103 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-------LSR----LGV--E-YVGDSRSVDFADEILELT  103 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-------HHT----TCC--S-EEEETTCSTHHHHHHHHT
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH-------HHH----cCC--C-EEeeCCcHHHHHHHHHHh
Confidence            58999999999999999999999999999999887332211       111    122  1 234776654443333321


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                       . .+++|++|+|+|..                           ..+..++.|+++|+++.+++..
T Consensus       104 -~-~~~~D~vi~~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          104 -D-GYGVDVVLNSLAGE---------------------------AIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             -T-TCCEEEEEECCCTH---------------------------HHHHHHHTEEEEEEEEECSCGG
T ss_pred             -C-CCCCeEEEECCchH---------------------------HHHHHHHHhccCCEEEEEcCCC
Confidence             1 13699999999731                           1345667888899999998854

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.88  E-value=2.5e-09  Score=82.81  Aligned_cols=81  Identities=15%  Similarity=0.142  Sum_probs=63.2

Q ss_pred             CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh--HHHHHHHHHHHHhcCCccE
Q 039897           52 SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD--ENCKRVVDEVVNAYGKIDI  129 (272)
Q Consensus        52 ~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~ld~  129 (272)
                      +-++.++++.|++.|++|++.+|+........+..+.+.+    .+.+...+.+|++++  ++++++++.+.+.+|+ |+
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~----~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dV  100 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ----AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DV  100 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH----TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH----cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CE
Confidence            4578999999999999999998865443221111222322    466788899999999  9999999999998999 99


Q ss_pred             EEEccccc
Q 039897          130 LVNNAAVQ  137 (272)
Q Consensus       130 vI~~ag~~  137 (272)
                      ||||||+.
T Consensus       101 LVnnAgg~  108 (157)
T 3gxh_A          101 LVHCLANY  108 (157)
T ss_dssp             EEECSBSH
T ss_pred             EEECCCCC
Confidence            99999973

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.87  E-value=7.9e-09  Score=75.30  Aligned_cols=75  Identities=12%  Similarity=0.063  Sum_probs=59.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|++...+.+.             ..++..+.+|+++.+++.++++ 
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~-   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-------------RMGVATKQVDAKDEAGLAKALG-   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-------------TTTCEEEECCTTCHHHHHHHTT-
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-------------hCCCcEEEecCCCHHHHHHHHc-
Confidence            4578999999 999999999999999 89999999743322211             2346678999999877776653 


Q ss_pred             HHHhcCCccEEEEcccc
Q 039897          120 VVNAYGKIDILVNNAAV  136 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~  136 (272)
                            .+|+||++++.
T Consensus        69 ------~~d~vi~~~~~   79 (118)
T 3ic5_A           69 ------GFDAVISAAPF   79 (118)
T ss_dssp             ------TCSEEEECSCG
T ss_pred             ------CCCEEEECCCc
Confidence                  79999999964

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.79  E-value=2.3e-08  Score=86.63  Aligned_cols=105  Identities=13%  Similarity=0.126  Sum_probs=73.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|+++||||++||||.++++.+...|++|++++++.+..+.+    .+       .+..   ..+|.++.+++.+.+.+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~-------~g~~---~~~d~~~~~~~~~~~~~  209 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQ-------IGFD---AAFNYKTVNSLEEALKK  209 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HH-------TTCS---EEEETTSCSCHHHHHHH
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hh-------cCCc---EEEecCCHHHHHHHHHH
Confidence            3589999999999999999999999999999998874332211    11       2221   33577764555555555


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +..  +++|++|+|+|..                           .++..+..++++|+++.++...+
T Consensus       210 ~~~--~~~d~vi~~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  248 (333)
T 1v3u_A          210 ASP--DGYDCYFDNVGGE---------------------------FLNTVLSQMKDFGKIAICGAISV  248 (333)
T ss_dssp             HCT--TCEEEEEESSCHH---------------------------HHHHHHTTEEEEEEEEECCCCC-
T ss_pred             HhC--CCCeEEEECCChH---------------------------HHHHHHHHHhcCCEEEEEecccc
Confidence            432  5799999999830                           12345677788999999987654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.78  E-value=2.6e-08  Score=86.95  Aligned_cols=105  Identities=11%  Similarity=0.080  Sum_probs=76.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|++|+||.++++.+...|++|++++++.+..+.+    .+       .+..   ..+|.++.+++.+.+.+
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~----~~-------~g~~---~~~d~~~~~~~~~~~~~  233 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF----RS-------IGGE---VFIDFTKEKDIVGAVLK  233 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH----HH-------TTCC---EEEETTTCSCHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH----HH-------cCCc---eEEecCccHhHHHHHHH
Confidence            3589999999999999999999999999999999875433221    11       2221   23477765666666666


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +...  ++|++|+|+|..                          ..++..++.|+++|+++.+++..
T Consensus       234 ~~~~--~~D~vi~~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  272 (347)
T 2hcy_A          234 ATDG--GAHGVINVSVSE--------------------------AAIEASTRYVRANGTTVLVGMPA  272 (347)
T ss_dssp             HHTS--CEEEEEECSSCH--------------------------HHHHHHTTSEEEEEEEEECCCCT
T ss_pred             HhCC--CCCEEEECCCcH--------------------------HHHHHHHHHHhcCCEEEEEeCCC
Confidence            5433  799999999841                          13456678888899999998865

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.72  E-value=3.7e-11  Score=108.11  Aligned_cols=164  Identities=15%  Similarity=0.052  Sum_probs=87.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhh--hcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAK--TSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .++.||+++|||++ +||+++|+.|...|++|+++++++......   .....+..  ......+..+....-..+-+..
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A---a~~g~dv~~lee~~~~aDvVi~atG~~~vl~~  336 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA---TMEGLQVLTLEDVVSEADIFVTTTGNKDIIML  336 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH---HHTTCEECCGGGTTTTCSEEEECSSCSCSBCH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHhCCccCCHHHHHHhcCEEEeCCCChhhhhH
Confidence            45899999999987 999999999999999999998874332211   11100000  0001111111110000111111


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHH-------HHhhhHHHHHHH-HHHHhccccCCeEEEecCCCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV-------FRTNIFSHFFMT-RHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~-------~~~N~~~~~~l~-~~~~~~~~~~g~iv~vsS~~~  187 (272)
                         ...+. -+.+.+|+|+|...     .+.+.+.+...       +..|+.+.+... +..+++|. .|+|||+||..+
T Consensus       337 ---e~l~~-mk~gaiVvNaG~~~-----~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLa-eGRIVNlsS~~G  406 (488)
T 3ond_A          337 ---DHMKK-MKNNAIVCNIGHFD-----NEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILA-EGRLMNLGCATG  406 (488)
T ss_dssp             ---HHHTT-SCTTEEEEESSSTT-----TTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEG-GGSCHHHHHSCC
T ss_pred             ---HHHHh-cCCCeEEEEcCCCC-----cccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHc-CCcEEEEecCcc
Confidence               01111 24677788888642     23556666544       223333332222 22333343 489999999876


Q ss_pred             ccCChh-----HHHHHHHHhhCCeEEEEEeccc
Q 039897          188 LWHSPE-----ARGLALQLVERGIRVNGVAPGP  215 (272)
Q Consensus       188 ~~~~~~-----~~~la~e~~~~gi~vn~i~PG~  215 (272)
                      .-+...     .+.||.++.-.+..++.+.||.
T Consensus       407 ~p~~vm~~sfa~Q~la~~~l~~~~~~~~~~~gv  439 (488)
T 3ond_A          407 HPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKV  439 (488)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSSE
T ss_pred             cCcccccccHHHHHHHHHHHHhCCCccccCCCc
Confidence            633222     5667766554444456677775

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.67  E-value=6.2e-08  Score=85.31  Aligned_cols=109  Identities=19%  Similarity=0.238  Sum_probs=74.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+.+++++|+|+ |+||+.+++.+...|++|++++++....+.+.   +.       .+..   +.+|.++.+++.+.+
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~---~~-------~g~~---~~~~~~~~~~l~~~~  227 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLD---DV-------FGGR---VITLTATEANIKKSV  227 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HH-------TTTS---EEEEECCHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH---Hh-------cCce---EEEecCCHHHHHHHH
Confidence            3588999999999 99999999999999999999999743322221   11       1221   456777777766665


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .       ..|+||++++......                    +..+.+..++.|++++.||++++..+
T Consensus       228 ~-------~~DvVi~~~g~~~~~~--------------------~~li~~~~l~~mk~gg~iV~v~~~~g  270 (369)
T 2eez_A          228 Q-------HADLLIGAVLVPGAKA--------------------PKLVTRDMLSLMKEGAVIVDVAVDQG  270 (369)
T ss_dssp             H-------HCSEEEECCC---------------------------CCSCHHHHTTSCTTCEEEECC----
T ss_pred             h-------CCCEEEECCCCCcccc--------------------chhHHHHHHHhhcCCCEEEEEecCCC
Confidence            3       5899999998732111                    12345667788988999999998653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.66  E-value=4.9e-08  Score=84.54  Aligned_cols=122  Identities=13%  Similarity=0.054  Sum_probs=80.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ++|+||||+|.||.+++..|+++|+       +|+++++... ..........+.+      ....++ .|+++.++..+
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~-~~~~~g~~~dl~~------~~~~~~-~di~~~~~~~~   76 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA-MKALEGVVMELED------CAFPLL-AGLEATDDPKV   76 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHT------TTCTTE-EEEEEESCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc-hhhccchhhhhhc------cccccc-CCeEeccChHH
Confidence            4799999999999999999999996       7999887631 1112221222221      111222 46665444443


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      .+       .+.|+|||.||....  +  ..+.   ...+++|+.++.++++++..+-..+.+++++|+..
T Consensus        77 a~-------~~~D~Vih~Ag~~~~--~--~~~~---~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~  133 (327)
T 1y7t_A           77 AF-------KDADYALLVGAAPRK--A--GMER---RDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA  133 (327)
T ss_dssp             HT-------TTCSEEEECCCCCCC--T--TCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred             Hh-------CCCCEEEECCCcCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence            33       369999999998532  1  1232   45789999999999999877521345788887753

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.65  E-value=1.4e-07  Score=83.98  Aligned_cols=82  Identities=22%  Similarity=0.265  Sum_probs=65.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEG---ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G---~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++|+|+|+ |+||+++++.|+++|   .+|++++|+.+.   +.+..+++...   .+.++..+.+|+++.++++++++.
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~---~~~la~~l~~~---~~~~~~~~~~D~~d~~~l~~~l~~   74 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSK---CQEIAQSIKAK---GYGEIDITTVDADSIEELVALINE   74 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHH---HHHHHHHHHHT---TCCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHH---HHHHHHHhhhh---cCCceEEEEecCCCHHHHHHHHHh
Confidence            47999999 899999999999998   489999998444   44444444321   234688899999999999999886


Q ss_pred             HHHhcCCccEEEEcccc
Q 039897          120 VVNAYGKIDILVNNAAV  136 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~  136 (272)
                      .     ++|+||||++.
T Consensus        75 ~-----~~DvVin~ag~   86 (405)
T 4ina_A           75 V-----KPQIVLNIALP   86 (405)
T ss_dssp             H-----CCSEEEECSCG
T ss_pred             h-----CCCEEEECCCc
Confidence            5     69999999986

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.58  E-value=1.5e-07  Score=81.35  Aligned_cols=104  Identities=12%  Similarity=0.075  Sum_probs=71.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|+++|||||+||||.++++.+...|++|++++++.+..+.+.    ++       +..   ..+|.++.+..+++.+..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~----~~-------g~~---~~~~~~~~~~~~~~~~~~  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KA-------GAW---QVINYREEDLVERLKEIT  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HH-------TCS---EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc-------CCC---EEEECCCccHHHHHHHHh
Confidence            5899999999999999999999999999999998743322221    11       111   234666554444333321


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                       . ..++|++|+|+|. .                          ..+..+..++++|+++.+++..+
T Consensus       206 -~-~~~~D~vi~~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~~  243 (327)
T 1qor_A          206 -G-GKKVRVVYDSVGR-D--------------------------TWERSLDCLQRRGLMVSFGNSSG  243 (327)
T ss_dssp             -T-TCCEEEEEECSCG-G--------------------------GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             -C-CCCceEEEECCch-H--------------------------HHHHHHHHhcCCCEEEEEecCCC
Confidence             1 1369999999982 1                          02455677888999999998654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.55  E-value=1.4e-07  Score=85.17  Aligned_cols=79  Identities=18%  Similarity=0.196  Sum_probs=58.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |++|+|+|+| +|++|+++++.|++.|++|++++|+...   +.+..+        ...++..+.+|+++.+++.++++ 
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~---a~~la~--------~~~~~~~~~~Dv~d~~~l~~~l~-   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLES---AKKLSA--------GVQHSTPISLDVNDDAALDAEVA-   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHH---HHHTTT--------TCTTEEEEECCTTCHHHHHHHHT-
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHH---HHHHHH--------hcCCceEEEeecCCHHHHHHHHc-
Confidence            3578999998 7999999999999999999999987432   221110        11235678899999888777663 


Q ss_pred             HHHhcCCccEEEEccccc
Q 039897          120 VVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~  137 (272)
                            .+|+||||++..
T Consensus        68 ------~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 ------KHDLVISLIPYT   79 (450)
T ss_dssp             ------TSSEEEECCC--
T ss_pred             ------CCcEEEECCccc
Confidence                  699999999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.53  E-value=3.1e-07  Score=79.57  Aligned_cols=104  Identities=14%  Similarity=0.133  Sum_probs=71.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|+++||+|++||||.++++.+...|++|++++++.+..+.+    .++       +..   ..+|.++.+..+.+.+.
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~----~~~-------g~~---~~~d~~~~~~~~~i~~~  209 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA----RKL-------GCH---HTINYSTQDFAEVVREI  209 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHH-------TCS---EEEETTTSCHHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHc-------CCC---EEEECCCHHHHHHHHHH
Confidence            3589999999999999999999999999999999874332222    111       111   23466654444333322


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      . . ..++|++|+|+|. .                          ..+..+..++++|+++.++...
T Consensus       210 ~-~-~~~~d~vi~~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~  247 (333)
T 1wly_A          210 T-G-GKGVDVVYDSIGK-D--------------------------TLQKSLDCLRPRGMCAAYGHAS  247 (333)
T ss_dssp             H-T-TCCEEEEEECSCT-T--------------------------THHHHHHTEEEEEEEEECCCTT
T ss_pred             h-C-CCCCeEEEECCcH-H--------------------------HHHHHHHhhccCCEEEEEecCC
Confidence            1 1 1369999999985 1                          1344567778889999998765

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.49  E-value=2.3e-08  Score=92.05  Aligned_cols=100  Identities=20%  Similarity=0.198  Sum_probs=60.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.+.   +++..+++       +.++.  .  +.+   +.++  
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~---a~~la~~~-------~~~~~--~--~~d---l~~~--  420 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYER---ALELAEAI-------GGKAL--S--LTD---LDNY--  420 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHH---HHHHHHHT-------TC-CE--E--TTT---TTTC--
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHc-------CCcee--e--HHH---hhhc--
Confidence            478999999999 599999999999999999999997433   33322222       12222  1  211   1100  


Q ss_pred             HHHHhcCCccEEEEcccccCC----CCCcccCCHHHHHHHHHhhhHHH
Q 039897          119 EVVNAYGKIDILVNNAAVQYK----AGSVEEIDEERLERVFRTNIFSH  162 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~----~~~~~~~~~~~~~~~~~~N~~~~  162 (272)
                          ..+.+|+||||+|+...    ..++.+...+.|..++++|+.+.
T Consensus       421 ----~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          421 ----HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             ------CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ----cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence                11358999999997432    13455556667777788887654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.49  E-value=1.9e-07  Score=81.29  Aligned_cols=105  Identities=15%  Similarity=0.142  Sum_probs=72.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|++|+||..+++.+...|++|++++++.+..+.+.   +   +    .+..   ..+|.++.+++.+.+.+
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~---~---~----~g~~---~~~d~~~~~~~~~~~~~  220 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK---T---K----FGFD---DAFNYKEESDLTAALKR  220 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---H---T----SCCS---EEEETTSCSCSHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---H---H----cCCc---eEEecCCHHHHHHHHHH
Confidence            35899999999999999999999999999999988743322211   0   1    2221   23466654445555554


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +..  +++|++|+|+|..                           ..+..+..++++|+++.++...
T Consensus       221 ~~~--~~~d~vi~~~g~~---------------------------~~~~~~~~l~~~G~~v~~G~~~  258 (345)
T 2j3h_A          221 CFP--NGIDIYFENVGGK---------------------------MLDAVLVNMNMHGRIAVCGMIS  258 (345)
T ss_dssp             HCT--TCEEEEEESSCHH---------------------------HHHHHHTTEEEEEEEEECCCGG
T ss_pred             HhC--CCCcEEEECCCHH---------------------------HHHHHHHHHhcCCEEEEEcccc
Confidence            432  5799999999741                           1345567788899999987654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.48  E-value=4.7e-07  Score=79.13  Aligned_cols=103  Identities=14%  Similarity=0.155  Sum_probs=70.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+||+||||.++++.+...|++|++++++.+..+.+    .++       +..   ..+|.++.+..+.+   
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~-------g~~---~~~~~~~~~~~~~~---  223 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA----EKL-------GAA---AGFNYKKEDFSEAT---  223 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHH-------TCS---EEEETTTSCHHHHH---
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHc-------CCc---EEEecCChHHHHHH---
Confidence            3589999999999999999999999999999999874332222    111       111   23466554433333   


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                       .+..  +++|++|+|+|...                           .+..+..++++|+++.++...+
T Consensus       224 -~~~~~~~~~d~vi~~~G~~~---------------------------~~~~~~~l~~~G~iv~~G~~~~  265 (354)
T 2j8z_A          224 -LKFTKGAGVNLILDCIGGSY---------------------------WEKNVNCLALDGRWVLYGLMGG  265 (354)
T ss_dssp             -HHHTTTSCEEEEEESSCGGG---------------------------HHHHHHHEEEEEEEEECCCTTC
T ss_pred             -HHHhcCCCceEEEECCCchH---------------------------HHHHHHhccCCCEEEEEeccCC
Confidence             2222  36999999998510                           2334566788899999987643

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.44  E-value=5.3e-07  Score=78.11  Aligned_cols=104  Identities=13%  Similarity=0.156  Sum_probs=70.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|++|+||..+++.+...|++|++++++.+..+.+   ..+       .+..   ..+|.++.+-.+ .+.+
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---~~~-------~g~~---~~~~~~~~~~~~-~~~~  213 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL---VEE-------LGFD---GAIDYKNEDLAA-GLKR  213 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHT-------TCCS---EEEETTTSCHHH-HHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHH-------cCCC---EEEECCCHHHHH-HHHH
Confidence            4589999999999999999999999999999999874332222   111       2221   224555543332 2222


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +.  .+++|++|+|+|..                           ..+..+..++++|+++.++...
T Consensus       214 ~~--~~~~d~vi~~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          214 EC--PKGIDVFFDNVGGE---------------------------ILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             HC--TTCEEEEEESSCHH---------------------------HHHHHHTTEEEEEEEEECCCGG
T ss_pred             hc--CCCceEEEECCCcc---------------------------hHHHHHHHHhhCCEEEEEeecc
Confidence            22  24799999999851                           1234567788899999998765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.43  E-value=8.7e-07  Score=79.89  Aligned_cols=110  Identities=16%  Similarity=0.196  Sum_probs=73.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEe--ccCC---------
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS--ADLG---------  108 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~D~~---------  108 (272)
                      -.|++|||+|++|+||..+++.+...|++|++++++.++.+.+    .   +    .+....+-.  .|+.         
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~---~----lGa~~~i~~~~~~~~~~~~~~~~~  287 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----R---A----LGCDLVINRAELGITDDIADDPRR  287 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----H---H----TTCCCEEEHHHHTCCTTGGGCHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----H---h----cCCCEEEecccccccccccccccc
Confidence            4589999999999999999999999999999998763332221    1   1    232222221  1221         


Q ss_pred             ChHHHHHHHHHHHHhcC-CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          109 FDENCKRVVDEVVNAYG-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       109 ~~~~~~~~~~~~~~~~g-~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +.++...+.+.+.+..+ ++|++|+++|..                           ..+..+..++++|+++.+++..+
T Consensus       288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          288 VVETGRKLAKLVVEKAGREPDIVFEHTGRV---------------------------TFGLSVIVARRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCSEEEECSCHH---------------------------HHHHHHHHSCTTCEEEESCCTTC
T ss_pred             cchhhhHHHHHHHHHhCCCceEEEECCCch---------------------------HHHHHHHHHhcCCEEEEEecCCC
Confidence            12344556666666554 699999999851                           01345567788999999998754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.43  E-value=4e-07  Score=68.45  Aligned_cols=78  Identities=10%  Similarity=0.129  Sum_probs=54.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++++++|+|+ |++|..+++.|.+.|++|++++++....+.       +      ......++..|.++.+.+.++  
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~-------~------~~~~~~~~~~d~~~~~~l~~~--   66 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-------Y------ASYATHAVIANATEENELLSL--   66 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT-------T------TTTCSEEEECCTTCHHHHHTT--
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-------H------HHhCCEEEEeCCCCHHHHHhc--
Confidence            466788999998 999999999999999999999887332111       1      112345677898886554432  


Q ss_pred             HHHHhcCCccEEEEcccc
Q 039897          119 EVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~  136 (272)
                          ..++.|++|++++.
T Consensus        67 ----~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 ----GIRNFEYVIVAIGA   80 (144)
T ss_dssp             ----TGGGCSEEEECCCS
T ss_pred             ----CCCCCCEEEECCCC
Confidence                13469999999875

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.41  E-value=1.9e-06  Score=73.92  Aligned_cols=87  Identities=21%  Similarity=0.252  Sum_probs=61.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++++|++||+|+ ||+|++++..|++.|+ +|++++|+.+..++.++..+++...   .+  ......++.+.+++.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~---~~--~~~~~~~~~~~~~l~~~  223 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK---TD--CKAQLFDIEDHEQLRKE  223 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH---SS--CEEEEEETTCHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh---cC--CceEEeccchHHHHHhh
Confidence            4689999999997 7999999999999999 8999999854455555555555431   12  22334455555544443


Q ss_pred             HHHHHHhcCCccEEEEccccc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +.       ..|+|||+....
T Consensus       224 l~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          224 IA-------ESVIFTNATGVG  237 (315)
T ss_dssp             HH-------TCSEEEECSSTT
T ss_pred             hc-------CCCEEEECccCC
Confidence            32       689999988753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.41  E-value=1.3e-07  Score=80.28  Aligned_cols=82  Identities=16%  Similarity=0.226  Sum_probs=56.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|+++|||++ |+|+++++.|++.| +|++++|+.+..+.   ..+++....   ... ..+.+|+++.       
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~---l~~~~~~~~---~~~-~~~~~d~~~~-------  187 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEA---LAKEIAEKL---NKK-FGEEVKFSGL-------  187 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHH---HHHHHHHHH---TCC-HHHHEEEECT-------
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHH---HHHHHhhhc---ccc-cceeEEEeeH-------
Confidence            35789999999997 99999999999999 99999997544333   333332210   001 1123455441       


Q ss_pred             HHHHHhcCCccEEEEcccccC
Q 039897          118 DEVVNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~  138 (272)
                         .+.++.+|+||||+|...
T Consensus       188 ---~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          188 ---DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             ---TCCCTTCCEEEECSCTTC
T ss_pred             ---HHhhCCCCEEEECCCCCC
Confidence               234578999999999753

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.40  E-value=6.8e-07  Score=80.90  Aligned_cols=81  Identities=20%  Similarity=0.221  Sum_probs=59.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..++++++|+|+|+ |++|++++..|++. |++|++++|+.+.   +++..    +    . .++..+.+|+++.+++.+
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~k---a~~la----~----~-~~~~~~~~D~~d~~~l~~   84 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLAN---AQALA----K----P-SGSKAISLDVTDDSALDK   84 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHH---HHHHH----G----G-GTCEEEECCTTCHHHHHH
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHH---HHHHH----H----h-cCCcEEEEecCCHHHHHH
Confidence            46688899999997 99999999999998 7899999997433   22221    1    1 235667899999887776


Q ss_pred             HHHHHHHhcCCccEEEEccccc
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +++       ++|+|||+++..
T Consensus        85 ~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           85 VLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             HHH-------TSSEEEECSCGG
T ss_pred             HHc-------CCCEEEECCchh
Confidence            664       699999999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.39  E-value=6.6e-07  Score=78.21  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=68.6

Q ss_pred             CC--cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           41 RG--KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        41 ~~--k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .|  ++|||+|++||||..+++.+...|+ +|++++++.+..+.+.   ++       .+..   ..+|.++.+ +.+.+
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~---~~-------~g~~---~~~d~~~~~-~~~~~  223 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLT---SE-------LGFD---AAINYKKDN-VAEQL  223 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH---HT-------SCCS---EEEETTTSC-HHHHH
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH---HH-------cCCc---eEEecCchH-HHHHH
Confidence            46  9999999999999999999999999 9999988733222111   10       1211   235666533 22223


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      .++..  +++|++|+|+|..                           ..+..+..++++|+++.++...
T Consensus       224 ~~~~~--~~~d~vi~~~G~~---------------------------~~~~~~~~l~~~G~iv~~G~~~  263 (357)
T 2zb4_A          224 RESCP--AGVDVYFDNVGGN---------------------------ISDTVISQMNENSHIILCGQIS  263 (357)
T ss_dssp             HHHCT--TCEEEEEESCCHH---------------------------HHHHHHHTEEEEEEEEECCCGG
T ss_pred             HHhcC--CCCCEEEECCCHH---------------------------HHHHHHHHhccCcEEEEECCcc
Confidence            22221  3799999999830                           1234567788899999998754

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.35  E-value=2.1e-06  Score=75.29  Aligned_cols=104  Identities=13%  Similarity=0.151  Sum_probs=69.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .++|++|||+|+ |+||..+++.+...|++|++++++....+++ +.+.++       +  +..+  | .+  ++.+.+.
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~-------g--a~~v--~-~~--~~~~~~~  241 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET-------K--TNYY--N-SS--NGYDKLK  241 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH-------T--CEEE--E-CT--TCSHHHH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh-------C--Ccee--c-hH--HHHHHHH
Confidence            456999999999 9999999999999999999999875111222 112111       1  2233  5 44  2222222


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHH-HHHHhccccCCeEEEecCCCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMT-RHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~-~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      + . . +++|++|+++|...                          .+ +..++.|+++|+|++++....
T Consensus       242 ~-~-~-~~~d~vid~~g~~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~~  282 (366)
T 2cdc_A          242 D-S-V-GKFDVIIDATGADV--------------------------NILGNVIPLLGRNGVLGLFGFSTS  282 (366)
T ss_dssp             H-H-H-CCEEEEEECCCCCT--------------------------HHHHHHGGGEEEEEEEEECSCCCS
T ss_pred             H-h-C-CCCCEEEECCCChH--------------------------HHHHHHHHHHhcCCEEEEEecCCC
Confidence            2 2 2 68999999998621                          22 556788888899999987654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.35  E-value=1.8e-06  Score=75.05  Aligned_cols=104  Identities=18%  Similarity=0.188  Sum_probs=69.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|+++||+|++|+||..+++.+...|++|++++++.+..+.++    ++       +..   ..+|.++.+ +.+.+.++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~----~~-------ga~---~~~d~~~~~-~~~~~~~~  230 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK----AL-------GAD---ETVNYTHPD-WPKEVRRL  230 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HH-------TCS---EEEETTSTT-HHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hc-------CCC---EEEcCCccc-HHHHHHHH
Confidence            5899999999999999999999999999999998744332221    11       111   124666543 22222222


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .. .+++|++|+++| ..                          ..+..+..++++|+++.+++...
T Consensus       231 ~~-~~~~d~vi~~~g-~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  269 (343)
T 2eih_A          231 TG-GKGADKVVDHTG-AL--------------------------YFEGVIKATANGGRIAIAGASSG  269 (343)
T ss_dssp             TT-TTCEEEEEESSC-SS--------------------------SHHHHHHHEEEEEEEEESSCCCS
T ss_pred             hC-CCCceEEEECCC-HH--------------------------HHHHHHHhhccCCEEEEEecCCC
Confidence            11 137999999998 21                          02445567788899999998654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.33  E-value=2.2e-06  Score=74.87  Aligned_cols=105  Identities=15%  Similarity=0.188  Sum_probs=71.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+||+|+||.++++.+...|++|++++++.+..+.++    ++       +..   ..+|.++.+..+ .+.+
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~l-------Ga~---~~~~~~~~~~~~-~~~~  230 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE----RL-------GAK---RGINYRSEDFAA-VIKA  230 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HH-------TCS---EEEETTTSCHHH-HHHH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hc-------CCC---EEEeCCchHHHH-HHHH
Confidence            35899999999999999999999999999999998744332221    11       211   123554443333 3333


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                      +.  .+++|++|+|+|..                           ..+..+..++++|+++.++...+.
T Consensus       231 ~~--~~g~Dvvid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~~  270 (353)
T 4dup_A          231 ET--GQGVDIILDMIGAA---------------------------YFERNIASLAKDGCLSIIAFLGGA  270 (353)
T ss_dssp             HH--SSCEEEEEESCCGG---------------------------GHHHHHHTEEEEEEEEECCCTTCS
T ss_pred             Hh--CCCceEEEECCCHH---------------------------HHHHHHHHhccCCEEEEEEecCCC
Confidence            32  35799999999851                           023346777889999999876543

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.33  E-value=1.7e-06  Score=74.81  Aligned_cols=103  Identities=13%  Similarity=0.170  Sum_probs=69.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+||+|+||..+++.+...|++|++++++.++.+.+    .   +    .+..   ..+|..+.+.    .+.
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~---~----~ga~---~~~~~~~~~~----~~~  208 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA----K---E----YGAE---YLINASKEDI----LRQ  208 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----H---H----TTCS---EEEETTTSCH----HHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----H---H----cCCc---EEEeCCCchH----HHH
Confidence            3589999999999999999999999999999999874332211    1   1    2221   2234444332    223


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +.+..  .++|++|+|+|..                           ..+..+..++++|+++.++...+
T Consensus       209 ~~~~~~~~g~D~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  251 (334)
T 3qwb_A          209 VLKFTNGKGVDASFDSVGKD---------------------------TFEISLAALKRKGVFVSFGNASG  251 (334)
T ss_dssp             HHHHTTTSCEEEEEECCGGG---------------------------GHHHHHHHEEEEEEEEECCCTTC
T ss_pred             HHHHhCCCCceEEEECCChH---------------------------HHHHHHHHhccCCEEEEEcCCCC
Confidence            33322  3699999999851                           12345567788999999987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.32  E-value=1e-06  Score=76.74  Aligned_cols=104  Identities=13%  Similarity=0.164  Sum_probs=68.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|+++||+|++|+||..+++.+... |++|++++++++..+.+    .++       +..   ..+|.++.+..+. +.+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~----~~~-------g~~---~~~~~~~~~~~~~-~~~  234 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA----KRA-------GAD---YVINASMQDPLAE-IRR  234 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH----HHH-------TCS---EEEETTTSCHHHH-HHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHh-------CCC---EEecCCCccHHHH-HHH
Confidence            5899999999999999999999999 99999998874333222    111       111   2235555433222 222


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +... +++|++|+|+|..                          ...+..+..++++|+++.++...
T Consensus       235 ~~~~-~~~d~vi~~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  274 (347)
T 1jvb_A          235 ITES-KGVDAVIDLNNSE--------------------------KTLSVYPKALAKQGKYVMVGLFG  274 (347)
T ss_dssp             HTTT-SCEEEEEESCCCH--------------------------HHHTTGGGGEEEEEEEEECCSSC
T ss_pred             HhcC-CCceEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEECCCC
Confidence            2211 5899999999862                          12233456678889999998764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.30  E-value=1.7e-06  Score=74.66  Aligned_cols=104  Identities=13%  Similarity=0.156  Sum_probs=70.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+||+|+||..+++.+...|++|++++++.++.+.++    ++       +..   ..+|.++.+-    .+.
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~-------Ga~---~~~~~~~~~~----~~~  200 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK----AL-------GAW---ETIDYSHEDV----AKR  200 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HH-------TCS---EEEETTTSCH----HHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hc-------CCC---EEEeCCCccH----HHH
Confidence            35899999999999999999999999999999998744332221    11       211   2234444332    233


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                      +.+..  .++|++|+|+|..                           ..+..+..++++|+++.++...+.
T Consensus       201 ~~~~~~~~g~Dvvid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~~  244 (325)
T 3jyn_A          201 VLELTDGKKCPVVYDGVGQD---------------------------TWLTSLDSVAPRGLVVSFGNASGP  244 (325)
T ss_dssp             HHHHTTTCCEEEEEESSCGG---------------------------GHHHHHTTEEEEEEEEECCCTTCC
T ss_pred             HHHHhCCCCceEEEECCChH---------------------------HHHHHHHHhcCCCEEEEEecCCCC
Confidence            33332  3699999999861                           223456778889999999886543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.28  E-value=1.7e-06  Score=65.11  Aligned_cols=76  Identities=12%  Similarity=0.073  Sum_probs=55.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +..++++|+|+ |.+|+.+++.|.++|++|++++++++..+.       +.+      ....++..|.++++.+.++   
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~-------~~~------~~~~~~~gd~~~~~~l~~~---   66 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIEL-------LED------EGFDAVIADPTDESFYRSL---   66 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-------HHH------TTCEEEECCTTCHHHHHHS---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH-------HHH------CCCcEEECCCCCHHHHHhC---
Confidence            34578999998 779999999999999999999997433221       211      1356788999998766543   


Q ss_pred             HHHhcCCccEEEEccc
Q 039897          120 VVNAYGKIDILVNNAA  135 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag  135 (272)
                         .....|++|.+.+
T Consensus        67 ---~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 ---DLEGVSAVLITGS   79 (141)
T ss_dssp             ---CCTTCSEEEECCS
T ss_pred             ---CcccCCEEEEecC
Confidence               1246899988776

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.21  E-value=4.1e-06  Score=72.63  Aligned_cols=103  Identities=12%  Similarity=0.065  Sum_probs=69.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|++++||..+++.+...|++|++++++.++.+.+++    +       +..   ..+|..+.+..    +.
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----l-------ga~---~~~~~~~~~~~----~~  204 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----L-------GAA---YVIDTSTAPLY----ET  204 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H-------TCS---EEEETTTSCHH----HH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----C-------CCc---EEEeCCcccHH----HH
Confidence            458999999999999999999999999999999988655433322    1       211   12344443322    23


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +.+..  .++|++|+|+|...                           +...+..++++|+++.++...+
T Consensus       205 ~~~~~~~~g~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~~~  247 (340)
T 3gms_A          205 VMELTNGIGADAAIDSIGGPD---------------------------GNELAFSLRPNGHFLTIGLLSG  247 (340)
T ss_dssp             HHHHTTTSCEEEEEESSCHHH---------------------------HHHHHHTEEEEEEEEECCCTTS
T ss_pred             HHHHhCCCCCcEEEECCCChh---------------------------HHHHHHHhcCCCEEEEEeecCC
Confidence            33322  37999999998620                           0112356788999999987654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.20  E-value=5.7e-06  Score=74.72  Aligned_cols=110  Identities=16%  Similarity=0.189  Sum_probs=75.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEE--ecc--------CCC
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI--SAD--------LGF  109 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~D--------~~~  109 (272)
                      -.|++|||+|++|+||...++.+...|++|++++++.++.+.+    .++       +....+-  ..|        ..+
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~----~~l-------Ga~~vi~~~~~d~~~~~~~~~~~  295 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC----RAM-------GAEAIIDRNAEGYRFWKDENTQD  295 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHH-------TCCEEEETTTTTCCSEEETTEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH----Hhh-------CCcEEEecCcCcccccccccccc
Confidence            4589999999999999999999999999999998764332222    222       2111111  111        234


Q ss_pred             hHHHHHHHHHHHHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          110 DENCKRVVDEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       110 ~~~~~~~~~~~~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .++.+++.+.+.+..+  ++|++|.++|. .                          .....+..++++|+++.+++..+
T Consensus       296 ~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~~  348 (456)
T 3krt_A          296 PKEWKRFGKRIRELTGGEDIDIVFEHPGR-E--------------------------TFGASVFVTRKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHHHHHHHHHHHHTSCCEEEEEECSCH-H--------------------------HHHHHHHHEEEEEEEEESCCTTC
T ss_pred             hHHHHHHHHHHHHHhCCCCCcEEEEcCCc-h--------------------------hHHHHHHHhhCCcEEEEEecCCC
Confidence            5666777777777553  79999999885 1                          12344567788999999987654

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.20  E-value=9.2e-06  Score=70.43  Aligned_cols=103  Identities=15%  Similarity=0.162  Sum_probs=69.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|+ |+||..+++.+...|++|++++++.+..+.+       ++    .+..   ..+|.++.+ +.+.+.+
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-------~~----lGa~---~~~d~~~~~-~~~~~~~  226 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-------KE----LGAD---LVVNPLKED-AAKFMKE  226 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-------HH----TTCS---EEECTTTSC-HHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-------HH----CCCC---EEecCCCcc-HHHHHHH
Confidence            35899999999 8899999999999999999998874433222       11    2221   224665432 3233333


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +   .+++|++|+++|...                          .++..+..++++|+++.+++...
T Consensus       227 ~---~~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  265 (339)
T 1rjw_A          227 K---VGGVHAAVVTAVSKP--------------------------AFQSAYNSIRRGGACVLVGLPPE  265 (339)
T ss_dssp             H---HSSEEEEEESSCCHH--------------------------HHHHHHHHEEEEEEEEECCCCSS
T ss_pred             H---hCCCCEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEecccCC
Confidence            2   268999999998520                          23455677788899999987654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.19  E-value=4.5e-06  Score=72.81  Aligned_cols=102  Identities=19%  Similarity=0.179  Sum_probs=67.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|+++||+|++||||.++++.+...|++|++++++.+..+.    +.   +    .+..   ..+|.++.+..+++.+..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~---~----~ga~---~~~d~~~~~~~~~~~~~~  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI----VL---Q----NGAH---EVFNHREVNYIDKIKKYV  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HH---H----TTCS---EEEETTSTTHHHHHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH----HH---H----cCCC---EEEeCCCchHHHHHHHHc
Confidence            58999999999999999999999999999999987433221    11   1    2221   234666544333332211


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                       . .+++|++|+|+|..            .               ....+..++++|+++.++..
T Consensus       236 -~-~~~~D~vi~~~G~~------------~---------------~~~~~~~l~~~G~iv~~g~~  271 (351)
T 1yb5_A          236 -G-EKGIDIIIEMLANV------------N---------------LSKDLSLLSHGGRVIVVGSR  271 (351)
T ss_dssp             -C-TTCEEEEEESCHHH------------H---------------HHHHHHHEEEEEEEEECCCC
T ss_pred             -C-CCCcEEEEECCChH------------H---------------HHHHHHhccCCCEEEEEecC
Confidence             1 13799999999841            0               11234566788999999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.18  E-value=1.1e-05  Score=70.31  Aligned_cols=103  Identities=14%  Similarity=0.130  Sum_probs=68.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ++++||+||+|+||..+++.+...|++|++++++.++.+.++    ++       +..   ..+|..+.+ +.+.+.++.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~-------Ga~---~~~~~~~~~-~~~~v~~~~  229 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DI-------GAA---HVLNEKAPD-FEATLREVM  229 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HH-------TCS---EEEETTSTT-HHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hc-------CCC---EEEECCcHH-HHHHHHHHh
Confidence            389999999999999999999999999999998755433332    11       211   123444433 222333222


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .. .++|++|+++|..                           .++..+..++++|+++.+++...
T Consensus       230 ~~-~g~D~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  267 (349)
T 3pi7_A          230 KA-EQPRIFLDAVTGP---------------------------LASAIFNAMPKRARWIIYGRLDP  267 (349)
T ss_dssp             HH-HCCCEEEESSCHH---------------------------HHHHHHHHSCTTCEEEECCCSCC
T ss_pred             cC-CCCcEEEECCCCh---------------------------hHHHHHhhhcCCCEEEEEeccCC
Confidence            21 3799999999851                           01234567788999999987654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.18  E-value=1.9e-06  Score=72.52  Aligned_cols=78  Identities=15%  Similarity=0.173  Sum_probs=52.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+.   +++..+++..    . ..+  ...|+   +++    
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~---~~~la~~~~~----~-~~~--~~~~~---~~~----  176 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSR---AEELAKLFAH----T-GSI--QALSM---DEL----  176 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH---HHHHHHHTGG----G-SSE--EECCS---GGG----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHH---HHHHHHHhhc----c-CCe--eEecH---HHh----
Confidence            3578999999998 799999999999999999999988443   3333332211    1 111  12232   221    


Q ss_pred             HHHHHhcCCccEEEEcccccC
Q 039897          118 DEVVNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~  138 (272)
                         . . +..|+||||++...
T Consensus       177 ---~-~-~~~DivVn~t~~~~  192 (271)
T 1nyt_A          177 ---E-G-HEFDLIINATSSGI  192 (271)
T ss_dssp             ---T-T-CCCSEEEECCSCGG
T ss_pred             ---c-c-CCCCEEEECCCCCC
Confidence               1 1 68999999999743

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.16  E-value=3.3e-06  Score=73.34  Aligned_cols=101  Identities=20%  Similarity=0.268  Sum_probs=65.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|++|+||..+++.+...|++|++++++.++.+.+++    +       +.. ..+  |..  ++   +.+.
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~-------ga~-~v~--~~~--~~---~~~~  218 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----V-------GAD-IVL--PLE--EG---WAKA  218 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----H-------TCS-EEE--ESS--TT---HHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----c-------CCc-EEe--cCc--hh---HHHH
Confidence            358999999999999999999999999999999987554433221    1       111 222  333  22   3333


Q ss_pred             HHHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +.+..+  ++|++|+|+|..         .                  .+..+..++++|+++.++...
T Consensus       219 v~~~~~~~g~Dvvid~~g~~---------~------------------~~~~~~~l~~~G~iv~~G~~~  260 (342)
T 4eye_A          219 VREATGGAGVDMVVDPIGGP---------A------------------FDDAVRTLASEGRLLVVGFAA  260 (342)
T ss_dssp             HHHHTTTSCEEEEEESCC-----------C------------------HHHHHHTEEEEEEEEEC----
T ss_pred             HHHHhCCCCceEEEECCchh---------H------------------HHHHHHhhcCCCEEEEEEccC
Confidence            333332  699999999851         0                  124557778899999998654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.09  E-value=1.3e-05  Score=70.70  Aligned_cols=106  Identities=13%  Similarity=0.138  Sum_probs=71.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+.+++++|+|+ |+||+.+++.+...|++|++++++....+.+.+   .       .+..+   ..+..+.+++.+++.
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~---~-------~g~~~---~~~~~~~~~l~~~l~  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDA---E-------FCGRI---HTRYSSAYELEGAVK  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---H-------TTTSS---EEEECCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---h-------cCCee---EeccCCHHHHHHHHc
Confidence            588999999998 999999999999999999999987443322211   1       12222   223344455544442


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                             ..|+||++++......+                    ..+.+..+..|++++.||++++.
T Consensus       231 -------~aDvVi~~~~~p~~~t~--------------------~li~~~~l~~mk~g~~iV~va~~  270 (377)
T 2vhw_A          231 -------RADLVIGAVLVPGAKAP--------------------KLVSNSLVAHMKPGAVLVDIAID  270 (377)
T ss_dssp             -------HCSEEEECCCCTTSCCC--------------------CCBCHHHHTTSCTTCEEEEGGGG
T ss_pred             -------CCCEEEECCCcCCCCCc--------------------ceecHHHHhcCCCCcEEEEEecC
Confidence                   58999999886321000                    11234566788889999999964

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.09  E-value=2e-05  Score=67.48  Aligned_cols=87  Identities=22%  Similarity=0.263  Sum_probs=59.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++++|++||+|+ ||.|++++..|++.|+ +|+++.|+.+..++.++..+++...   .+  ......+..+.+...+.
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~---~~--~~v~~~~~~~l~~~~~~  217 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN---TD--CVVTVTDLADQHAFTEA  217 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH---SS--CEEEEEETTCHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc---cC--cceEEechHhhhhhHhh
Confidence            4688999999997 8999999999999999 7999999855455555555555431   22  22233444443222222


Q ss_pred             HHHHHHhcCCccEEEEccccc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +       ...|+|||+.+..
T Consensus       218 l-------~~~DiIINaTp~G  231 (312)
T 3t4e_A          218 L-------ASADILTNGTKVG  231 (312)
T ss_dssp             H-------HHCSEEEECSSTT
T ss_pred             c-------cCceEEEECCcCC
Confidence            2       2489999988764

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.09  E-value=1.1e-05  Score=70.57  Aligned_cols=107  Identities=14%  Similarity=0.191  Sum_probs=68.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+++++|+|+|+ |++|+++++.+...|++|++++|+.+..+.+.+.   .       ...+..   +..+.+++.+.+ 
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~---~-------~~~~~~---~~~~~~~~~~~~-  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETL---F-------GSRVEL---LYSNSAEIETAV-  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---H-------GGGSEE---EECCHHHHHHHH-
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh---h-------CceeEe---eeCCHHHHHHHH-
Confidence            367799999999 9999999999999999999999985443333221   1       111111   222333333322 


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                            ...|+||++++......+                    ..+.+..+..|++++.|+.+++..
T Consensus       229 ------~~~DvVI~~~~~~~~~~~--------------------~li~~~~~~~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          229 ------AEADLLIGAVLVPGRRAP--------------------ILVPASLVEQMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             ------HTCSEEEECCCCTTSSCC--------------------CCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             ------cCCCEEEECCCcCCCCCC--------------------eecCHHHHhhCCCCCEEEEEecCC
Confidence                  269999999987331111                    111233456778889999998764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.08  E-value=1.1e-05  Score=70.75  Aligned_cols=104  Identities=13%  Similarity=0.105  Sum_probs=68.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+||+|+||..+++.+...|++|++++++.+..+.+       ++    .+.. ..  +|..+. ++.+.+.+
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-------~~----~Ga~-~~--~~~~~~-~~~~~~~~  226 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL-------KS----LGCD-RP--INYKTE-PVGTVLKQ  226 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-------HH----TTCS-EE--EETTTS-CHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-------HH----cCCc-EE--EecCCh-hHHHHHHH
Confidence            3589999999999999999999999999999998874332221       11    2221 12  344332 23333332


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      ..  .+++|++|+|+|..                           ..+..+..++++|+++.+++..+
T Consensus       227 ~~--~~g~D~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~  265 (362)
T 2c0c_A          227 EY--PEGVDVVYESVGGA---------------------------MFDLAVDALATKGRLIVIGFISG  265 (362)
T ss_dssp             HC--TTCEEEEEECSCTH---------------------------HHHHHHHHEEEEEEEEECCCGGG
T ss_pred             hc--CCCCCEEEECCCHH---------------------------HHHHHHHHHhcCCEEEEEeCCCC
Confidence            21  14799999999730                           12345567788899999987643

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=98.04  E-value=1.9e-05  Score=67.16  Aligned_cols=98  Identities=14%  Similarity=0.153  Sum_probs=63.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|+++||+|++|++|..+++.+...|++|++++++.+..+.+++           .+..   ..+|..+.+   .+.+.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-----------~ga~---~~~~~~~~~---~~~~~~  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-----------LGAE---EAATYAEVP---ERAKAW  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-----------TTCS---EEEEGGGHH---HHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----------cCCC---EEEECCcch---hHHHHh
Confidence            58999999999999999999999999999999997554433211           2221   123443311   222222


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                          +++|++|+ +|. . .                         .+..+..++++|+++.++....
T Consensus       188 ----~~~d~vid-~g~-~-~-------------------------~~~~~~~l~~~G~~v~~g~~~~  222 (302)
T 1iz0_A          188 ----GGLDLVLE-VRG-K-E-------------------------VEESLGLLAHGGRLVYIGAAEG  222 (302)
T ss_dssp             ----TSEEEEEE-CSC-T-T-------------------------HHHHHTTEEEEEEEEEC-----
T ss_pred             ----cCceEEEE-CCH-H-H-------------------------HHHHHHhhccCCEEEEEeCCCC
Confidence                57999999 874 1 0                         2445677788899999887643

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.01  E-value=0.00014  Score=62.64  Aligned_cols=115  Identities=11%  Similarity=0.141  Sum_probs=71.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+|+||||+|.+|..++..|+++|  ..|++++++..     .....++.+    ...... +.. +++..+..+.+   
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-----~~~~~dL~~----~~~~~~-v~~-~~~t~d~~~al---   74 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-----PGVTADISH----MDTGAV-VRG-FLGQQQLEAAL---   74 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-----HHHHHHHHT----SCSSCE-EEE-EESHHHHHHHH---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-----HhHHHHhhc----ccccce-EEE-EeCCCCHHHHc---
Confidence            589999999999999999999998  78999887643     111222222    111111 111 22223333333   


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEec
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT  183 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vs  183 (272)
                          .+.|+||+++|.....+    .+.   ...+..|+.+...+.+.+..+- .++.|+++|
T Consensus        75 ----~gaDvVi~~ag~~~~~g----~~r---~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           75 ----TGMDLIIVPAGVPRKPG----MTR---DDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             ----TTCSEEEECCCCCCCSS----CCC---SHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             ----CCCCEEEEcCCcCCCCC----CCH---HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence                47999999999743221    111   2347889999999999887653 234444443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.01  E-value=1.9e-05  Score=68.20  Aligned_cols=123  Identities=10%  Similarity=0.030  Sum_probs=79.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccch-hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQE-EKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ..+|+||||+|.||..++..|+..|.       .|++++++... .+++.....++.+.    ....   ..|+....+.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~----~~~~---~~~i~~~~~~   77 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC----AFPL---LAGMTAHADP   77 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT----TCTT---EEEEEEESSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh----cccc---cCcEEEecCc
Confidence            35899999999999999999999885       78888776111 12222223333321    1111   1244333333


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      .+.+       .+.|+|||.||.....    ..+.   .+.+..|+.....+.+.+..+-...+.|+++|..
T Consensus        78 ~~al-------~~aD~Vi~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNP  135 (329)
T 1b8p_A           78 MTAF-------KDADVALLVGARPRGP----GMER---KDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNP  135 (329)
T ss_dssp             HHHT-------TTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             HHHh-------CCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCc
Confidence            3333       4789999999974321    2233   3457899999999999888763245789999874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.99  E-value=3.1e-05  Score=65.39  Aligned_cols=82  Identities=16%  Similarity=0.291  Sum_probs=54.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+.+.   +++....  ...+  ....+.   +++.+.
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la---~~~~~~~--~~~~--i~~~~~---~~l~~~  191 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA---DVINNAV--GREA--VVGVDA---RGIEDV  191 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHH---HHHHHHH--TSCC--EEEECS---TTHHHH
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH---HHHHhhc--CCce--EEEcCH---HHHHHH
Confidence            3688999999998 7999999999999999 6999999855444443   3333211  1222  223333   233333


Q ss_pred             HHHHHHhcCCccEEEEccccc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +.       ..|+|||+....
T Consensus       192 l~-------~~DiVInaTp~G  205 (283)
T 3jyo_A          192 IA-------AADGVVNATPMG  205 (283)
T ss_dssp             HH-------HSSEEEECSSTT
T ss_pred             Hh-------cCCEEEECCCCC
Confidence            32       479999988753

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.97  E-value=2.7e-05  Score=67.68  Aligned_cols=101  Identities=12%  Similarity=0.145  Sum_probs=66.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|++|||+||+|+||...++.+...|++|++++++.++.+.++    ++       +.. ..  +|..+  ++.+.+.++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~l-------Ga~-~v--i~~~~--~~~~~~~~~  213 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK----KM-------GAD-IV--LNHKE--SLLNQFKTQ  213 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH----HH-------TCS-EE--ECTTS--CHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hc-------CCc-EE--EECCc--cHHHHHHHh
Confidence            6899999999999999999999999999999988744322221    11       211 12  23332  222223322


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        ..+++|++++++|..                          ...+..+..++.+|+++.+++.
T Consensus       214 --~~~g~Dvv~d~~g~~--------------------------~~~~~~~~~l~~~G~iv~~~~~  250 (346)
T 3fbg_A          214 --GIELVDYVFCTFNTD--------------------------MYYDDMIQLVKPRGHIATIVAF  250 (346)
T ss_dssp             --TCCCEEEEEESSCHH--------------------------HHHHHHHHHEEEEEEEEESSCC
T ss_pred             --CCCCccEEEECCCch--------------------------HHHHHHHHHhccCCEEEEECCC
Confidence              224799999998852                          1224455677889999988753

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.96  E-value=3.2e-05  Score=59.10  Aligned_cols=82  Identities=16%  Similarity=0.135  Sum_probs=55.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +..+..+++++|+|+ |.+|..+++.|.+.|++|+++++++...+.+.            .......+..|.++.+.+.+
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~------------~~~g~~~~~~d~~~~~~l~~   79 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLN------------SEFSGFTVVGDAAEFETLKE   79 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSC------------TTCCSEEEESCTTSHHHHHT
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH------------hcCCCcEEEecCCCHHHHHH
Confidence            345577889999996 99999999999999999999999855433221            02345567788877544332


Q ss_pred             HHHHHHHhcCCccEEEEcccc
Q 039897          116 VVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      .      .....|+||.+.+.
T Consensus        80 ~------~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           80 C------GMEKADMVFAFTND   94 (155)
T ss_dssp             T------TGGGCSEEEECSSC
T ss_pred             c------CcccCCEEEEEeCC
Confidence            1      12368999988764

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.94  E-value=4.4e-05  Score=66.25  Aligned_cols=100  Identities=15%  Similarity=0.211  Sum_probs=65.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|++|||+||+|+||..+++.+...|++|+++ ++.++   +. .+.++       +  +..  +| .+ +++.+.+.++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~---~~-~~~~l-------G--a~~--i~-~~-~~~~~~~~~~  211 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSD---LE-YVRDL-------G--ATP--ID-AS-REPEDYAAEH  211 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH---HH-HHHHH-------T--SEE--EE-TT-SCHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH---HH-HHHHc-------C--CCE--ec-cC-CCHHHHHHHH
Confidence            58999999999999999999999999999988 55322   21 12221       2  222  44 32 2333333332


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      .. ..++|++|.++|..                           .....+..++++|+++.++...
T Consensus       212 ~~-~~g~D~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~  249 (343)
T 3gaz_A          212 TA-GQGFDLVYDTLGGP---------------------------VLDASFSAVKRFGHVVSCLGWG  249 (343)
T ss_dssp             HT-TSCEEEEEESSCTH---------------------------HHHHHHHHEEEEEEEEESCCCS
T ss_pred             hc-CCCceEEEECCCcH---------------------------HHHHHHHHHhcCCeEEEEcccC
Confidence            21 13699999999841                           1234556778889999988764

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.94  E-value=4.8e-05  Score=66.64  Aligned_cols=100  Identities=15%  Similarity=0.119  Sum_probs=67.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|++|||+|+ |+||..+++.+...|++|++++++....+.+.+   +       .+..   ..+|..+.+.+.      
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~-------lGa~---~v~~~~~~~~~~------  246 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---N-------FGAD---SFLVSRDQEQMQ------  246 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---T-------SCCS---EEEETTCHHHHH------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---h-------cCCc---eEEeccCHHHHH------
Confidence            7899999996 999999999999999999999887544322211   1       2221   123555543222      


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                       +..+++|++|.++|...                          .++..++.|+++|+++++++...
T Consensus       247 -~~~~~~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~~~  286 (366)
T 1yqd_A          247 -AAAGTLDGIIDTVSAVH--------------------------PLLPLFGLLKSHGKLILVGAPEK  286 (366)
T ss_dssp             -HTTTCEEEEEECCSSCC--------------------------CSHHHHHHEEEEEEEEECCCCSS
T ss_pred             -HhhCCCCEEEECCCcHH--------------------------HHHHHHHHHhcCCEEEEEccCCC
Confidence             22357999999998631                          12234567788899999998653

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.94  E-value=0.00011  Score=64.14  Aligned_cols=108  Identities=14%  Similarity=0.138  Sum_probs=71.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|++|||+|+ |++|...++.+...|++ |++++++.++.+.++    +       ....+..+..|-.+.+++.   +
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~-------l~~~~~~~~~~~~~~~~~~---~  242 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK----E-------ICPEVVTHKVERLSAEESA---K  242 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH----H-------HCTTCEEEECCSCCHHHHH---H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----H-------hchhcccccccccchHHHH---H
Confidence            35899999998 99999999988889997 888887744332222    1       1223344455544445444   4


Q ss_pred             HHHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          119 EVVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       119 ~~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                      .+.+..  .++|+++.++|..                          ...+..+..++++|+++.++.....
T Consensus       243 ~v~~~t~g~g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~~~  288 (363)
T 3m6i_A          243 KIVESFGGIEPAVALECTGVE--------------------------SSIAAAIWAVKFGGKVFVIGVGKNE  288 (363)
T ss_dssp             HHHHHTSSCCCSEEEECSCCH--------------------------HHHHHHHHHSCTTCEEEECCCCCSC
T ss_pred             HHHHHhCCCCCCEEEECCCCh--------------------------HHHHHHHHHhcCCCEEEEEccCCCC
Confidence            444433  3699999998852                          1234455677889999999875443

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.91  E-value=6.6e-05  Score=57.18  Aligned_cols=80  Identities=13%  Similarity=0.062  Sum_probs=56.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc-hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ-EEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      |.+++++|+|+ |.+|+.+++.|.+.|++|+++++++. ..+.+..    .      ...++.++..|.++++.+.+.  
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~----~------~~~~~~~i~gd~~~~~~l~~a--   67 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQ----R------LGDNADVIPGDSNDSSVLKKA--   67 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHH----H------HCTTCEEEESCTTSHHHHHHH--
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHH----h------hcCCCeEEEcCCCCHHHHHHc--
Confidence            34677899986 99999999999999999999998632 1112211    1      133477889999988765543  


Q ss_pred             HHHHhcCCccEEEEcccc
Q 039897          119 EVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~  136 (272)
                          .....|.||.+.+.
T Consensus        68 ----~i~~ad~vi~~~~~   81 (153)
T 1id1_A           68 ----GIDRCRAILALSDN   81 (153)
T ss_dssp             ----TTTTCSEEEECSSC
T ss_pred             ----ChhhCCEEEEecCC
Confidence                12468888887753

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.89  E-value=4.8e-05  Score=66.82  Aligned_cols=101  Identities=13%  Similarity=0.137  Sum_probs=64.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+||+|+||..+++.+...|++|+++++ .++.+    .+.   +    .+.. .  .+|..+.+-    .+.
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~----~~~---~----lGa~-~--v~~~~~~~~----~~~  242 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE----LVR---K----LGAD-D--VIDYKSGSV----EEQ  242 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH----HHH---H----TTCS-E--EEETTSSCH----HHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH----HHH---H----cCCC-E--EEECCchHH----HHH
Confidence            35899999999999999999999899999988873 22221    111   1    2222 1  234444322    223


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +.+ .+++|++|.++|...                         ......+..++++|+++.+++.
T Consensus       243 ~~~-~~g~D~vid~~g~~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  282 (375)
T 2vn8_A          243 LKS-LKPFDFILDNVGGST-------------------------ETWAPDFLKKWSGATYVTLVTP  282 (375)
T ss_dssp             HHT-SCCBSEEEESSCTTH-------------------------HHHGGGGBCSSSCCEEEESCCS
T ss_pred             Hhh-cCCCCEEEECCCChh-------------------------hhhHHHHHhhcCCcEEEEeCCC
Confidence            332 257999999998521                         1122334566788999999864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.88  E-value=6.5e-05  Score=65.24  Aligned_cols=102  Identities=15%  Similarity=0.132  Sum_probs=68.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|++|||+|+ |+||..+++.+...|+ +|++++++.++.+.+    .++       +.  . ..+|..+++ +   .+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~----~~~-------Ga--~-~~~~~~~~~-~---~~~  227 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA----KKV-------GA--D-YVINPFEED-V---VKE  227 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH----HHH-------TC--S-EEECTTTSC-H---HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHh-------CC--C-EEECCCCcC-H---HHH
Confidence            7899999999 9999999999989999 899998874332222    111       21  1 123444322 2   233


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +.+..  .++|++|.++|..                          ..++..++.++++|+++.+++...
T Consensus       228 v~~~~~g~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~~  271 (348)
T 2d8a_A          228 VMDITDGNGVDVFLEFSGAP--------------------------KALEQGLQAVTPAGRVSLLGLYPG  271 (348)
T ss_dssp             HHHHTTTSCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCSS
T ss_pred             HHHHcCCCCCCEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEccCCC
Confidence            33322  2699999999851                          123556677788999999988654

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.87  E-value=0.00027  Score=60.51  Aligned_cols=120  Identities=14%  Similarity=0.095  Sum_probs=71.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|+||||+|.+|..++..|+..|.  .++++++. .+.+++.....++.+.....+..+.....|    +++.+      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~-~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGRE-HSINKLEGLREDIYDALAGTRSDANIYVES----DENLR------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECG-GGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCC-CchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH------
Confidence            699999999999999999998885  57888771 112222222222322111111222222211    01111      


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                       .+.+.|+|||.||.....    ..+.   ...+..|+..+..+.+.+..+-  ++.++++|.
T Consensus        71 -al~gaD~Vi~~Ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SN  123 (313)
T 1hye_A           71 -IIDESDVVIITSGVPRKE----GMSR---MDLAKTNAKIVGKYAKKIAEIC--DTKIFVITN  123 (313)
T ss_dssp             -GGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHC--CCEEEECSS
T ss_pred             -HhCCCCEEEECCCCCCCC----CCcH---HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecC
Confidence             234799999999974322    1233   3458999999999999998764  445555554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.86  E-value=0.0001  Score=64.03  Aligned_cols=104  Identities=13%  Similarity=0.113  Sum_probs=65.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~  118 (272)
                      -.|++|||+|+ |++|...++.+...|++|++++++.+..+.+    .   +    .+.. .  .+|.++ .+..+++.+
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~---~----lGa~-~--~~~~~~~~~~~~~i~~  231 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----K---N----CGAD-V--TLVVDPAKEEESSIIE  231 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----H---H----TTCS-E--EEECCTTTSCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----H---H----hCCC-E--EEcCcccccHHHHHHH
Confidence            35899999997 8999999998888999998888764332222    1   1    2222 2  234443 222222222


Q ss_pred             HHHH--hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVN--AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~--~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                       ...  ..+++|++|.++|...                          ..+..+..++++|+++.++..
T Consensus       232 -~~~~~~g~g~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  273 (352)
T 1e3j_A          232 -RIRSAIGDLPNVTIDCSGNEK--------------------------CITIGINITRTGGTLMLVGMG  273 (352)
T ss_dssp             -HHHHHSSSCCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             -HhccccCCCCCEEEECCCCHH--------------------------HHHHHHHHHhcCCEEEEEecC
Confidence             111  0246999999998521                          234455677889999999864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.86  E-value=3.9e-05  Score=67.21  Aligned_cols=72  Identities=15%  Similarity=0.165  Sum_probs=56.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++|+|.|+ |++|+.+++.|++ .++|.+++++.+..+.+              ...+..+.+|++|.+++.++++    
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~--------------~~~~~~~~~d~~d~~~l~~~~~----   76 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV--------------KEFATPLKVDASNFDKLVEVMK----   76 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH--------------TTTSEEEECCTTCHHHHHHHHT----
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH--------------hccCCcEEEecCCHHHHHHHHh----
Confidence            46999998 9999999998875 57999999974433221              2345678999999988887775    


Q ss_pred             hcCCccEEEEccccc
Q 039897          123 AYGKIDILVNNAAVQ  137 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~  137 (272)
                         ..|+||++++..
T Consensus        77 ---~~DvVi~~~p~~   88 (365)
T 3abi_A           77 ---EFELVIGALPGF   88 (365)
T ss_dssp             ---TCSEEEECCCGG
T ss_pred             ---CCCEEEEecCCc
Confidence               689999998763

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.85  E-value=4.5e-05  Score=65.01  Aligned_cols=38  Identities=32%  Similarity=0.503  Sum_probs=33.3

Q ss_pred             CCCCcE-EEEEcCCC-----------------c-hHHHHHHHHHHcCCeEEEEeccc
Q 039897           39 KLRGKV-ALVTGGDS-----------------G-IGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        39 ~l~~k~-vlVtGas~-----------------g-IG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ++.||+ ||||+|..                 | .|.++|++++++||.|+++.+..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            578888 99998764                 4 99999999999999999998854

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.85  E-value=7.2e-05  Score=64.81  Aligned_cols=101  Identities=17%  Similarity=0.106  Sum_probs=67.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|++|||+|+ |++|..+++.+...|+ +|++++++.++.+.+++           .   .. ..+|..++ ++.+.+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-----------l---a~-~v~~~~~~-~~~~~~~~  226 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-----------Y---AD-RLVNPLEE-DLLEVVRR  226 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-----------T---CS-EEECTTTS-CHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-----------h---HH-hccCcCcc-CHHHHHHH
Confidence            7899999999 9999999998888999 89999887433222110           1   11 12344432 33333433


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +.  .+++|++|.++|..                          ...+..+..++++|+++.++...
T Consensus       227 ~~--~~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  265 (343)
T 2dq4_A          227 VT--GSGVEVLLEFSGNE--------------------------AAIHQGLMALIPGGEARILGIPS  265 (343)
T ss_dssp             HH--SSCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCS
T ss_pred             hc--CCCCCEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEecCC
Confidence            32  34799999999851                          12345567778889999998753

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.80  E-value=0.00056  Score=58.27  Aligned_cols=115  Identities=16%  Similarity=0.081  Sum_probs=72.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEec--ccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYV--KSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +|+||||+|.+|..++..|+..|.  .++++++  +.   ++++....++.+... ...++.... +  +.+        
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~---~~~~~~~~dl~~~~~-~~~~~~v~~-~--~~~--------   66 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE---DDTVGQAADTNHGIA-YDSNTRVRQ-G--GYE--------   66 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH---HHHHHHHHHHHHHHT-TTCCCEEEE-C--CGG--------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCCh---hhHHHHHHHHHHHHh-hCCCcEEEe-C--CHH--------
Confidence            699999999999999999998876  5888887  43   223222333333221 122333332 2  111        


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                         .+.+.|+||+.||.....    ..+.+   ..+..|+..+..+.+.+..+ ..++.|+++|.
T Consensus        67 ---a~~~aDvVi~~ag~~~~~----g~~r~---dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN  120 (303)
T 1o6z_A           67 ---DTAGSDVVVITAGIPRQP----GQTRI---DLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN  120 (303)
T ss_dssp             ---GGTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred             ---HhCCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence               124799999999974322    12333   34889999999999988775 33445555443

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.78  E-value=0.0001  Score=54.67  Aligned_cols=75  Identities=12%  Similarity=0.211  Sum_probs=52.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +++++|+|+ |.+|..+++.|.+.|++|+++++++...   ..    +.+     ...+.++..|.++.+.+.+.     
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~---~~----~~~-----~~~~~~~~~d~~~~~~l~~~-----   65 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC---KK----ASA-----EIDALVINGDCTKIKTLEDA-----   65 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH---HH----HHH-----HCSSEEEESCTTSHHHHHHT-----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH---HH----HHH-----hcCcEEEEcCCCCHHHHHHc-----
Confidence            357999987 9999999999999999999998874322   11    111     11345677888876654321     


Q ss_pred             HhcCCccEEEEccc
Q 039897          122 NAYGKIDILVNNAA  135 (272)
Q Consensus       122 ~~~g~ld~vI~~ag  135 (272)
                       .....|+||.+.+
T Consensus        66 -~~~~~d~vi~~~~   78 (140)
T 1lss_A           66 -GIEDADMYIAVTG   78 (140)
T ss_dssp             -TTTTCSEEEECCS
T ss_pred             -CcccCCEEEEeeC
Confidence             1346899999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.77  E-value=0.00023  Score=62.37  Aligned_cols=105  Identities=15%  Similarity=0.141  Sum_probs=69.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~  117 (272)
                      -.|++|||+|+ |++|...++.+...|+ +|++++++.++.+.++    +       .+.. .+  +|..+ .+++.+.+
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~-------lGa~-~v--i~~~~~~~~~~~~~  255 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----V-------FGAT-DF--VNPNDHSEPISQVL  255 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----H-------TTCC-EE--ECGGGCSSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----H-------hCCc-eE--EeccccchhHHHHH
Confidence            35899999995 9999999998888999 7988888754433221    1       2221 12  34332 12344444


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecCCCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTSVEP  187 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS~~~  187 (272)
                      .++..  +++|++|.++|..                          ...+..+..++++ |+++.++....
T Consensus       256 ~~~~~--~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~~  298 (374)
T 1cdo_A          256 SKMTN--GGVDFSLECVGNV--------------------------GVMRNALESCLKGWGVSVLVGWTDL  298 (374)
T ss_dssp             HHHHT--SCBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCSS
T ss_pred             HHHhC--CCCCEEEECCCCH--------------------------HHHHHHHHHhhcCCcEEEEEcCCCC
Confidence            44332  4799999999861                          1234556778888 99999987643

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.76  E-value=0.00011  Score=64.20  Aligned_cols=104  Identities=18%  Similarity=0.132  Sum_probs=67.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+| +|++|...++.+...|++|++++++.++.+.+    .++       +.. .  .+| .+.+++.+.+.+
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~l-------Ga~-~--vi~-~~~~~~~~~v~~  251 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA----FAL-------GAD-H--GIN-RLEEDWVERVYA  251 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHH-------TCS-E--EEE-TTTSCHHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH----HHc-------CCC-E--EEc-CCcccHHHHHHH
Confidence            3589999999 89999999999989999999998874433222    221       221 1  234 333333333333


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +.. ..++|+++.++|. .                          ..+..+..++++|+++.++...+
T Consensus       252 ~~~-g~g~D~vid~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~~  291 (363)
T 3uog_A          252 LTG-DRGADHILEIAGG-A--------------------------GLGQSLKAVAPDGRISVIGVLEG  291 (363)
T ss_dssp             HHT-TCCEEEEEEETTS-S--------------------------CHHHHHHHEEEEEEEEEECCCSS
T ss_pred             HhC-CCCceEEEECCCh-H--------------------------HHHHHHHHhhcCCEEEEEecCCC
Confidence            321 1279999999983 1                          02334566788999999987654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.76  E-value=0.00016  Score=62.48  Aligned_cols=103  Identities=12%  Similarity=0.099  Sum_probs=68.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|+ |++|...++.+...|++|++++++.++.+.+    .   +    .+.. .  .+|..+.+-.+    .
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~---~----lGa~-~--~i~~~~~~~~~----~  225 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----R---R----LGAE-V--AVNARDTDPAA----W  225 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----H---H----TTCS-E--EEETTTSCHHH----H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----H---H----cCCC-E--EEeCCCcCHHH----H
Confidence            46899999997 8999999998888999999998874433222    1   1    2222 1  23444433222    2


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +.+..+++|++|.++|..                          ...+..+..++++|+++.++...+
T Consensus       226 ~~~~~g~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~~  267 (340)
T 3s2e_A          226 LQKEIGGAHGVLVTAVSP--------------------------KAFSQAIGMVRRGGTIALNGLPPG  267 (340)
T ss_dssp             HHHHHSSEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCSS
T ss_pred             HHHhCCCCCEEEEeCCCH--------------------------HHHHHHHHHhccCCEEEEeCCCCC
Confidence            333346899999998741                          123445667788999999987553

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.75  E-value=6.5e-05  Score=63.08  Aligned_cols=77  Identities=12%  Similarity=0.143  Sum_probs=52.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++   .++..+++..    .. .+..  .|+   +++.   
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~---a~~l~~~~~~----~~-~~~~--~~~---~~~~---  177 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSK---TKELAERFQP----YG-NIQA--VSM---DSIP---  177 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHH---HHHHHHHHGG----GS-CEEE--EEG---GGCC---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHccc----cC-CeEE--eeH---HHhc---
Confidence            3578999999998 799999999999999999999998544   3333333321    11 2211  222   1110   


Q ss_pred             HHHHHhcCCccEEEEccccc
Q 039897          118 DEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~  137 (272)
                           . +..|+|||+++..
T Consensus       178 -----~-~~~DivIn~t~~~  191 (272)
T 1p77_A          178 -----L-QTYDLVINATSAG  191 (272)
T ss_dssp             -----C-SCCSEEEECCCC-
T ss_pred             -----c-CCCCEEEECCCCC
Confidence                 1 4799999999974

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.73  E-value=0.0001  Score=61.05  Aligned_cols=84  Identities=15%  Similarity=0.243  Sum_probs=56.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc-------------------chhhhHHHHHHHHHHhhhcCCC
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS-------------------QEEKDAQETLEILREAKTSDAK   98 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   98 (272)
                      +|++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.   +.+.+..  +..
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~---~~l~~~n--p~~  101 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESAR---DALTRIN--PHI  101 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHH---HHHHHHC--TTS
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHH---HHHHHHC--CCc
Confidence            478899999996 7999999999999997 899999876                   3333333   3333211  234


Q ss_pred             CceEEeccCCChHHHHHHHHHHHHhcCCccEEEEcccc
Q 039897           99 DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus        99 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      ++..+..++++ +.+.+++       ...|+||.+...
T Consensus       102 ~v~~~~~~~~~-~~~~~~~-------~~~DvVi~~~d~  131 (249)
T 1jw9_B          102 AITPVNALLDD-AELAALI-------AEHDLVLDCTDN  131 (249)
T ss_dssp             EEEEECSCCCH-HHHHHHH-------HTSSEEEECCSS
T ss_pred             EEEEEeccCCH-hHHHHHH-------hCCCEEEEeCCC
Confidence            45556655653 3333333       368999988643

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.70  E-value=0.00048  Score=59.92  Aligned_cols=102  Identities=15%  Similarity=0.166  Sum_probs=65.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCC--ChHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLG--FDENCKRV  116 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~  116 (272)
                      -.|++|||+|+ |++|...++.+...|+ +|++++++.++.+.+    .+       .+.. ..  +|..  +.++   +
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~-------lGa~-~v--i~~~~~~~~~---~  231 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KE-------IGAD-LV--LQISKESPQE---I  231 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HH-------TTCS-EE--EECSSCCHHH---H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HH-------hCCC-EE--EcCcccccch---H
Confidence            35899999996 8999999998888999 899998864332221    11       2222 22  2433  2233   2


Q ss_pred             HHHHHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          117 VDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       117 ~~~~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      .+.+.+.. +++|++|.++|...                          ..+..+..++.+|+++.++..
T Consensus       232 ~~~i~~~~~~g~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  275 (356)
T 1pl8_A          232 ARKVEGQLGCKPEVTIECTGAEA--------------------------SIQAGIYATRSGGTLVLVGLG  275 (356)
T ss_dssp             HHHHHHHHTSCCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             HHHHHHHhCCCCCEEEECCCChH--------------------------HHHHHHHHhcCCCEEEEEecC
Confidence            33333322 57999999998521                          123445677889999998863

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.67  E-value=0.0004  Score=60.84  Aligned_cols=101  Identities=14%  Similarity=0.141  Sum_probs=66.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~  118 (272)
                      .|++|||+|+ |+||...++.+...|+ +|++++++.++.+.++    +       .+.. ..  +|..+ .+++.+.+.
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~-------lGa~-~v--i~~~~~~~~~~~~v~  259 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK----A-------LGAT-DC--LNPRELDKPVQDVIT  259 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----H-------TTCS-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----H-------hCCc-EE--EccccccchHHHHHH
Confidence            5899999995 9999999998888999 7988888754433221    1       2221 12  33332 123333333


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTS  184 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS  184 (272)
                      ++..  +++|++|.++|..                          ...+..+..++++ |+++.++.
T Consensus       260 ~~~~--~g~Dvvid~~G~~--------------------------~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          260 ELTA--GGVDYSLDCAGTA--------------------------QTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             HHHT--SCBSEEEESSCCH--------------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             HHhC--CCccEEEECCCCH--------------------------HHHHHHHHHhhcCCCEEEEECC
Confidence            3322  4799999999861                          1134456777888 99999886

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.67  E-value=0.00039  Score=61.06  Aligned_cols=105  Identities=12%  Similarity=0.067  Sum_probs=67.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|++|||+| +|++|...++.+...| ++|++++++.++.+.++       +    .+.. .++..+.++.++   +.+
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-------~----lGa~-~vi~~~~~~~~~---~~~  257 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-------E----IGAD-LTLNRRETSVEE---RRK  257 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-------H----TTCS-EEEETTTSCHHH---HHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-------H----cCCc-EEEeccccCcch---HHH
Confidence            3589999999 8999999999888899 59999998743322221       1    2221 222222112333   333


Q ss_pred             HHHHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          119 EVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       119 ~~~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      .+.+..+  ++|++|.++|..                          ..++..+..++++|+++.++...
T Consensus       258 ~v~~~~~g~g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  301 (380)
T 1vj0_A          258 AIMDITHGRGADFILEATGDS--------------------------RALLEGSELLRRGGFYSVAGVAV  301 (380)
T ss_dssp             HHHHHTTTSCEEEEEECSSCT--------------------------THHHHHHHHEEEEEEEEECCCCS
T ss_pred             HHHHHhCCCCCcEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEecCC
Confidence            4444332  699999999852                          01234556778889999998765

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.64  E-value=0.00033  Score=61.27  Aligned_cols=104  Identities=17%  Similarity=0.176  Sum_probs=67.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~  117 (272)
                      -.|++|||+|+ |++|...++.+...|+ +|++++++.++.+.++    ++       +.. .+  +|..+ .+++.+.+
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~----~l-------Ga~-~v--i~~~~~~~~~~~~v  253 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK----EF-------GAT-EC--INPQDFSKPIQEVL  253 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HH-------TCS-EE--ECGGGCSSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----Hc-------CCc-eE--eccccccccHHHHH
Confidence            35899999996 9999999998888999 7988888755433322    11       211 12  23332 12333333


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecCCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTSVE  186 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS~~  186 (272)
                      .++..  +++|++|.++|..                          ...+..+..++++ |+++.++...
T Consensus       254 ~~~~~--~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  295 (373)
T 2fzw_A          254 IEMTD--GGVDYSFECIGNV--------------------------KVMRAALEACHKGWGVSVVVGVAA  295 (373)
T ss_dssp             HHHTT--SCBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             HHHhC--CCCCEEEECCCcH--------------------------HHHHHHHHhhccCCcEEEEEecCC
Confidence            33322  4799999999861                          1134456777888 9999998654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.63  E-value=0.00012  Score=62.85  Aligned_cols=100  Identities=17%  Similarity=0.113  Sum_probs=63.2

Q ss_pred             Cc-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GK-VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k-~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |+ +|||+|++|++|..+++.+...|++|++++++.++.+.+++           .+.. ..  +|..+.+  .+.+..+
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-----------lGa~-~~--i~~~~~~--~~~~~~~  212 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-----------LGAK-EV--LAREDVM--AERIRPL  212 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-----------TTCS-EE--EECC-----------C
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----------cCCc-EE--EecCCcH--HHHHHHh
Confidence            44 79999999999999999988999999999987544333221           2221 12  3444322  1222222


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                        ..+++|++|.++|..  .                         ....+..++++|+++.++...
T Consensus       213 --~~~~~d~vid~~g~~--~-------------------------~~~~~~~l~~~G~~v~~G~~~  249 (328)
T 1xa0_A          213 --DKQRWAAAVDPVGGR--T-------------------------LATVLSRMRYGGAVAVSGLTG  249 (328)
T ss_dssp             --CSCCEEEEEECSTTT--T-------------------------HHHHHHTEEEEEEEEECSCCS
T ss_pred             --cCCcccEEEECCcHH--H-------------------------HHHHHHhhccCCEEEEEeecC
Confidence              124799999999851  1                         233456678889999998754

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.62  E-value=0.00049  Score=60.24  Aligned_cols=104  Identities=15%  Similarity=0.115  Sum_probs=67.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~  117 (272)
                      -.|++|||+|+ |++|..+++.+...|+ +|++++++.++.+.++    +       .+.. ..  +|..+ .+++.+.+
T Consensus       190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~-------lGa~-~v--i~~~~~~~~~~~~~  254 (374)
T 2jhf_A          190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK----E-------VGAT-EC--VNPQDYKKPIQEVL  254 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----H-------TTCS-EE--ECGGGCSSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----H-------hCCc-eE--ecccccchhHHHHH
Confidence            35899999995 9999999998888999 7988888754433221    1       2221 12  34332 12333333


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecCCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTSVE  186 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS~~  186 (272)
                      .++..  +++|++|.++|..                          ...+..+..++++ |+++.++...
T Consensus       255 ~~~~~--~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  296 (374)
T 2jhf_A          255 TEMSN--GGVDFSFEVIGRL--------------------------DTMVTALSCCQEAYGVSVIVGVPP  296 (374)
T ss_dssp             HHHTT--SCBSEEEECSCCH--------------------------HHHHHHHHHBCTTTCEEEECSCCC
T ss_pred             HHHhC--CCCcEEEECCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccCC
Confidence            33322  4799999999861                          1234455677888 9999988654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.57  E-value=0.00027  Score=61.76  Aligned_cols=100  Identities=12%  Similarity=0.108  Sum_probs=64.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYAL-EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~-~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|++|||+||+|++|...++.+.. .|++|++++++.++.+.+       ++    .+.. .+  +|..+  +   +.+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-------~~----lGad-~v--i~~~~--~---~~~~  231 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-------KS----LGAH-HV--IDHSK--P---LAAE  231 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-------HH----TTCS-EE--ECTTS--C---HHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-------HH----cCCC-EE--EeCCC--C---HHHH
Confidence            588999999999999988876655 489999998874332222       11    2221 12  23332  2   2333


Q ss_pred             HHHh-cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNA-YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~-~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +.+. .+++|+++.++|..                          ...+.++..++++|+++.++..
T Consensus       232 v~~~~~~g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  272 (363)
T 4dvj_A          232 VAALGLGAPAFVFSTTHTD--------------------------KHAAEIADLIAPQGRFCLIDDP  272 (363)
T ss_dssp             HHTTCSCCEEEEEECSCHH--------------------------HHHHHHHHHSCTTCEEEECSCC
T ss_pred             HHHhcCCCceEEEECCCch--------------------------hhHHHHHHHhcCCCEEEEECCC
Confidence            3333 24799999998852                          1234456677889999998653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.57  E-value=0.00015  Score=62.84  Aligned_cols=94  Identities=16%  Similarity=0.220  Sum_probs=65.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|+ |+||...++.+...|++|++++++.++.+.+++           .+... .+    ++.+.+.+    
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-----------lGa~~-v~----~~~~~~~~----  233 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-----------MGVKH-FY----TDPKQCKE----  233 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-----------TTCSE-EE----SSGGGCCS----
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-----------cCCCe-ec----CCHHHHhc----
Confidence            45899999997 999999999888899999999887655443321           23222 22    33332221    


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                            ++|+++.++|...                          ..+..+..++++|+++.++...
T Consensus       234 ------~~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  268 (348)
T 3two_A          234 ------ELDFIISTIPTHY--------------------------DLKDYLKLLTYNGDLALVGLPP  268 (348)
T ss_dssp             ------CEEEEEECCCSCC--------------------------CHHHHHTTEEEEEEEEECCCCC
T ss_pred             ------CCCEEEECCCcHH--------------------------HHHHHHHHHhcCCEEEEECCCC
Confidence                  7999999998631                          1233556778899999998754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.56  E-value=0.00015  Score=63.20  Aligned_cols=99  Identities=13%  Similarity=0.072  Sum_probs=65.5

Q ss_pred             CCcEEEEEcCCCchHHHH-HHHH-HHcCCe-EEEEecccc---hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           41 RGKVALVTGGDSGIGRAV-AHCY-ALEGAT-VAFTYVKSQ---EEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~ai-a~~l-~~~G~~-v~i~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .+++|||+|+ |++|... ++.+ ...|++ |++++++.+   +.+.+    .+       .+  +..+  |..+. ++.
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~----~~-------lG--a~~v--~~~~~-~~~  234 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----EE-------LD--ATYV--DSRQT-PVE  234 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH----HH-------TT--CEEE--ETTTS-CGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH----HH-------cC--Cccc--CCCcc-CHH
Confidence            3499999999 9999999 8776 677998 999998755   32222    11       22  2233  54432 233


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      + +.++   .+++|++|.++|...                          ..+..+..++++|+++.++...
T Consensus       235 ~-i~~~---~gg~Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~~  276 (357)
T 2b5w_A          235 D-VPDV---YEQMDFIYEATGFPK--------------------------HAIQSVQALAPNGVGALLGVPS  276 (357)
T ss_dssp             G-HHHH---SCCEEEEEECSCCHH--------------------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             H-HHHh---CCCCCEEEECCCChH--------------------------HHHHHHHHHhcCCEEEEEeCCC
Confidence            3 3333   247999999998521                          2344556778889999998765

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.56  E-value=0.00015  Score=61.66  Aligned_cols=39  Identities=23%  Similarity=0.315  Sum_probs=34.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccch
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQE   78 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~   78 (272)
                      ++.+++++|+|+ ||+|++++..|++.|+ +|++++|+.++
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~k  177 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEK  177 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence            578999999997 7899999999999998 89999987433

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.56  E-value=0.0001  Score=57.83  Aligned_cols=79  Identities=14%  Similarity=0.140  Sum_probs=55.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++.+++++|+| .|.+|..+++.|.+. |++|++++++++..+.       +.+    .  .+..+..|.++++.+.++
T Consensus        35 ~~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-------~~~----~--g~~~~~gd~~~~~~l~~~  100 (183)
T 3c85_A           35 INPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQ-------HRS----E--GRNVISGDATDPDFWERI  100 (183)
T ss_dssp             BCCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-------HHH----T--TCCEEECCTTCHHHHHTB
T ss_pred             cCCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-------HHH----C--CCCEEEcCCCCHHHHHhc
Confidence            346677899998 599999999999999 9999999997433221       211    2  345677898886644322


Q ss_pred             HHHHHHhcCCccEEEEccc
Q 039897          117 VDEVVNAYGKIDILVNNAA  135 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag  135 (272)
                           ......|+||.+.+
T Consensus       101 -----~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 -----LDTGHVKLVLLAMP  114 (183)
T ss_dssp             -----CSCCCCCEEEECCS
T ss_pred             -----cCCCCCCEEEEeCC
Confidence                 01246899988765

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.54  E-value=0.00054  Score=57.89  Aligned_cols=93  Identities=16%  Similarity=0.188  Sum_probs=63.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc------------------chhhhHHHHHHHHHHhhhcCCC
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS------------------QEEKDAQETLEILREAKTSDAK   98 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~   98 (272)
                      .+|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .+.+.+++.+.++.     +..
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN-----P~v  105 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN-----PDV  105 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC-----TTS
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC-----CCc
Confidence            4588999999985 7899999999999996 788888765                  22333333333221     455


Q ss_pred             CceEEeccCCChHHHHHHHHHHHHh----cCCccEEEEcccc
Q 039897           99 DPMAISADLGFDENCKRVVDEVVNA----YGKIDILVNNAAV  136 (272)
Q Consensus        99 ~~~~~~~D~~~~~~~~~~~~~~~~~----~g~ld~vI~~ag~  136 (272)
                      ++..+..++++.+.+..+++.+...    ....|+||.+...
T Consensus       106 ~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn  147 (292)
T 3h8v_A          106 LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN  147 (292)
T ss_dssp             EEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS
T ss_pred             EEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc
Confidence            6677777787766676666544321    1368888876643

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.54  E-value=0.00093  Score=58.47  Aligned_cols=102  Identities=10%  Similarity=0.093  Sum_probs=64.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|++|++|...++.+...|++|+.+. +.++.+    .+.+       .+.. .+  +|..+.+    +.+.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~----~~~~-------lGa~-~v--i~~~~~~----~~~~  223 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD----LAKS-------RGAE-EV--FDYRAPN----LAQT  223 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH----HHHH-------TTCS-EE--EETTSTT----HHHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH----HHHH-------cCCc-EE--EECCCch----HHHH
Confidence            4689999999999999999999989999998875 332222    1111       2221 22  3444432    2333


Q ss_pred             HHHh-cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc-ccCCeEEEecCCC
Q 039897          120 VVNA-YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM-NEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~-~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~g~iv~vsS~~  186 (272)
                      +++. .+++|+++.++|...                          ..+..+..+ +.+|+++.++...
T Consensus       224 v~~~t~g~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~~G~iv~~g~~~  266 (371)
T 3gqv_A          224 IRTYTKNNLRYALDCITNVE--------------------------STTFCFAAIGRAGGHYVSLNPFP  266 (371)
T ss_dssp             HHHHTTTCCCEEEESSCSHH--------------------------HHHHHHHHSCTTCEEEEESSCCC
T ss_pred             HHHHccCCccEEEECCCchH--------------------------HHHHHHHHhhcCCCEEEEEecCc
Confidence            3333 246999999998621                          123344556 4689999988654

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.54  E-value=0.00074  Score=59.08  Aligned_cols=103  Identities=17%  Similarity=0.068  Sum_probs=66.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~  118 (272)
                      .|++|||+|+ |+||...++.+...|+ +|++++++.++.+.++    +       .+.. .+  +|..+ .+++.+.+.
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~-------lGa~-~v--i~~~~~~~~~~~~i~  255 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----E-------LGAT-EC--LNPKDYDKPIYEVIC  255 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----H-------TTCS-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH----H-------cCCc-EE--EecccccchHHHHHH
Confidence            5899999995 9999999998888899 7888887754433221    1       2221 12  23332 122333333


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecCCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTSVE  186 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS~~  186 (272)
                      ++.  .+++|++|.++|..                          ...+..+..++++ |+++.++...
T Consensus       256 ~~t--~gg~Dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  296 (373)
T 1p0f_A          256 EKT--NGGVDYAVECAGRI--------------------------ETMMNALQSTYCGSGVTVVLGLAS  296 (373)
T ss_dssp             HHT--TSCBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECCCCC
T ss_pred             HHh--CCCCCEEEECCCCH--------------------------HHHHHHHHHHhcCCCEEEEEccCC
Confidence            322  24799999999761                          1234456777888 9999998654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.53  E-value=0.00025  Score=62.14  Aligned_cols=98  Identities=15%  Similarity=0.131  Sum_probs=65.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|.+|||+|+ |++|...++.+...|++|+++++++++.+.++    ++       +..   ..+|..+.+.    ++++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~----~l-------Ga~---~vi~~~~~~~----~~~~  254 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK----AL-------GAD---EVVNSRNADE----MAAH  254 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HH-------TCS---EEEETTCHHH----HHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hc-------CCc---EEeccccHHH----HHHh
Confidence            5899999997 88999999988889999999988755433322    11       211   1234444432    2222


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      .   +++|++|.++|...                          ..+..+..++++|+++.++...
T Consensus       255 ~---~g~Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  291 (369)
T 1uuf_A          255 L---KSFDFILNTVAAPH--------------------------NLDDFTTLLKRDGTMTLVGAPA  291 (369)
T ss_dssp             T---TCEEEEEECCSSCC--------------------------CHHHHHTTEEEEEEEEECCCC-
T ss_pred             h---cCCCEEEECCCCHH--------------------------HHHHHHHHhccCCEEEEeccCC
Confidence            2   57999999998621                          1233456778889999988754

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.49  E-value=0.00025  Score=62.11  Aligned_cols=103  Identities=20%  Similarity=0.302  Sum_probs=66.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|++|||+|+ |++|...++.+...|+ +|++++++.++.+.    +.++       +..   ...|.++.+    +.+
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a~~l-------Ga~---~vi~~~~~~----~~~  241 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL----AEEV-------GAT---ATVDPSAGD----VVE  241 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH----HHHH-------TCS---EEECTTSSC----HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHHc-------CCC---EEECCCCcC----HHH
Confidence            35899999998 8999999998888999 78888776433221    2222       211   123444432    223


Q ss_pred             HHHH---h-cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          119 EVVN---A-YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       119 ~~~~---~-~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .+.+   . .+++|++|.++|..                          ...+..+..++.+|+++.++....
T Consensus       242 ~i~~~~~~~~gg~Dvvid~~G~~--------------------------~~~~~~~~~l~~~G~vv~~G~~~~  288 (370)
T 4ej6_A          242 AIAGPVGLVPGGVDVVIECAGVA--------------------------ETVKQSTRLAKAGGTVVILGVLPQ  288 (370)
T ss_dssp             HHHSTTSSSTTCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCCT
T ss_pred             HHHhhhhccCCCCCEEEECCCCH--------------------------HHHHHHHHHhccCCEEEEEeccCC
Confidence            3332   2 24799999998752                          123445677788999999987654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.49  E-value=0.00037  Score=60.32  Aligned_cols=101  Identities=13%  Similarity=0.069  Sum_probs=65.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .|++|||+|+ |+||...++.+...  |++|++++++.++.+.+    .++       +.. .+  +|..+.   ..+++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~----~~l-------Ga~-~v--i~~~~~---~~~~~  231 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA----LEL-------GAD-YV--SEMKDA---ESLIN  231 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH----HHH-------TCS-EE--ECHHHH---HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH----HHh-------CCC-EE--eccccc---hHHHH
Confidence            7899999999 89999999988888  99999998864333222    111       111 11  232220   12333


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      ++.. ..++|++|.++|..                          ...+..+..++++|+++.++...
T Consensus       232 ~~~~-g~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  272 (344)
T 2h6e_A          232 KLTD-GLGASIAIDLVGTE--------------------------ETTYNLGKLLAQEGAIILVGMEG  272 (344)
T ss_dssp             HHHT-TCCEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCS
T ss_pred             Hhhc-CCCccEEEECCCCh--------------------------HHHHHHHHHhhcCCEEEEeCCCC
Confidence            3332 22799999999852                          12344567778889999998754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.47  E-value=0.00029  Score=52.75  Aligned_cols=74  Identities=14%  Similarity=0.119  Sum_probs=52.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++++|.|. |.+|..+++.|.+.|+.|++++++++..+.       +.+      ..+.++..|.++++.+.++      
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~-------~~~------~g~~~i~gd~~~~~~l~~a------   67 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDE-------LRE------RGVRAVLGNAANEEIMQLA------   67 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-------HHH------TTCEEEESCTTSHHHHHHT------
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-------HHH------cCCCEEECCCCCHHHHHhc------
Confidence            45777786 889999999999999999999998433222       211      2456788999998765543      


Q ss_pred             hcCCccEEEEcccc
Q 039897          123 AYGKIDILVNNAAV  136 (272)
Q Consensus       123 ~~g~ld~vI~~ag~  136 (272)
                      .....|.+|.+.+.
T Consensus        68 ~i~~ad~vi~~~~~   81 (140)
T 3fwz_A           68 HLECAKWLILTIPN   81 (140)
T ss_dssp             TGGGCSEEEECCSC
T ss_pred             CcccCCEEEEECCC
Confidence            12357888877654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.46  E-value=0.00019  Score=63.67  Aligned_cols=40  Identities=20%  Similarity=0.130  Sum_probs=35.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE   79 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~   79 (272)
                      .+.+++|+|+|+ |.+|..+++.+...|++|++++++....
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~  208 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVK  208 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            578999999996 8999999999999999999999985543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.43  E-value=0.0018  Score=56.33  Aligned_cols=109  Identities=14%  Similarity=0.169  Sum_probs=65.6

Q ss_pred             CC-cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh--HHHHHHH
Q 039897           41 RG-KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD--ENCKRVV  117 (272)
Q Consensus        41 ~~-k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~  117 (272)
                      .| ++|||+|++|++|...++.+...|++|+++.++........+.+.++       +.. .++  |..+.  +++.+.+
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l-------Ga~-~vi--~~~~~~~~~~~~~i  235 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-------GAT-QVI--TEDQNNSREFGPTI  235 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-------TCS-EEE--EHHHHHCGGGHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc-------CCe-EEE--ecCccchHHHHHHH
Confidence            47 89999999999999999988888999998877644311222222222       211 122  22110  1222222


Q ss_pred             HHHHH-hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          118 DEVVN-AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       118 ~~~~~-~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      .++.. ..+++|++|.++|...                          +. ..+..++++|+++.++...
T Consensus       236 ~~~t~~~~~g~Dvvid~~G~~~--------------------------~~-~~~~~l~~~G~~v~~g~~~  278 (364)
T 1gu7_A          236 KEWIKQSGGEAKLALNCVGGKS--------------------------ST-GIARKLNNNGLMLTYGGMS  278 (364)
T ss_dssp             HHHHHHHTCCEEEEEESSCHHH--------------------------HH-HHHHTSCTTCEEEECCCCS
T ss_pred             HHHhhccCCCceEEEECCCchh--------------------------HH-HHHHHhccCCEEEEecCCC
Confidence            22220 1247999999998520                          01 2346778899999998754

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.42  E-value=0.00093  Score=58.58  Aligned_cols=104  Identities=16%  Similarity=0.137  Sum_probs=67.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC-hHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF-DENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~  117 (272)
                      -.|.+|||+|+ |+||...++.+...|+ +|++++++.++.+.++       +    .+.. .+  +|..+ .+++.+.+
T Consensus       192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-------~----lGa~-~v--i~~~~~~~~~~~~i  256 (378)
T 3uko_A          192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-------K----FGVN-EF--VNPKDHDKPIQEVI  256 (378)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-------T----TTCC-EE--ECGGGCSSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-------H----cCCc-EE--EccccCchhHHHHH
Confidence            35899999998 9999999998888999 7999988755433221       1    2221 12  23331 22333333


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecCCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTSVE  186 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS~~  186 (272)
                      .++.  .+++|++|.++|..                          ...+..+..++++ |+++.++...
T Consensus       257 ~~~~--~gg~D~vid~~g~~--------------------------~~~~~~~~~l~~g~G~iv~~G~~~  298 (378)
T 3uko_A          257 VDLT--DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAA  298 (378)
T ss_dssp             HHHT--TSCBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             HHhc--CCCCCEEEECCCCH--------------------------HHHHHHHHHhhccCCEEEEEcccC
Confidence            3332  24799999998861                          1234456777885 9999998754

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.36  E-value=0.0002  Score=62.51  Aligned_cols=103  Identities=18%  Similarity=0.128  Sum_probs=65.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+|+ |++|...++.+...|++|++++++.++.+.+++    +       +.. .+  +|..+..+   +.+.
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----l-------Ga~-~v--~~~~~~~~---~~~~  239 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----M-------GAD-HY--IATLEEGD---WGEK  239 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H-------TCS-EE--EEGGGTSC---HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----c-------CCC-EE--EcCcCchH---HHHH
Confidence            35899999999 999999999888899999999987655433321    1       211 12  23332201   2222


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +.   +++|++|.++|.... ..                       .+..+..++++|+++.++....
T Consensus       240 ~~---~~~D~vid~~g~~~~-~~-----------------------~~~~~~~l~~~G~iv~~g~~~~  280 (360)
T 1piw_A          240 YF---DTFDLIVVCASSLTD-ID-----------------------FNIMPKAMKVGGRIVSISIPEQ  280 (360)
T ss_dssp             SC---SCEEEEEECCSCSTT-CC-----------------------TTTGGGGEEEEEEEEECCCCCS
T ss_pred             hh---cCCCEEEECCCCCcH-HH-----------------------HHHHHHHhcCCCEEEEecCCCC
Confidence            22   589999999986200 00                       1123456678899999987654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.33  E-value=0.001  Score=58.10  Aligned_cols=102  Identities=9%  Similarity=0.082  Sum_probs=64.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|++|||+|+ |+||...++.+...|+ +|++++++.+..+.+    .++       +.. .+  +|..+.+    +.+
T Consensus       189 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a----~~l-------Ga~-~v--i~~~~~~----~~~  249 (371)
T 1f8f_A          189 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA----KQL-------GAT-HV--INSKTQD----PVA  249 (371)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HHH-------TCS-EE--EETTTSC----HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHc-------CCC-EE--ecCCccC----HHH
Confidence            35899999995 9999999998888899 688888764332222    121       211 12  2333322    222


Q ss_pred             HHHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          119 EVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       119 ~~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      .+.+.. +++|++|.++|..                          ...+..+..++++|+++.++...
T Consensus       250 ~~~~~~~gg~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  292 (371)
T 1f8f_A          250 AIKEITDGGVNFALESTGSP--------------------------EILKQGVDALGILGKIAVVGAPQ  292 (371)
T ss_dssp             HHHHHTTSCEEEEEECSCCH--------------------------HHHHHHHHTEEEEEEEEECCCCS
T ss_pred             HHHHhcCCCCcEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEeCCCC
Confidence            333322 3799999999851                          12344567778899999998754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.30  E-value=0.00079  Score=58.91  Aligned_cols=114  Identities=16%  Similarity=0.153  Sum_probs=71.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccC-----------
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADL-----------  107 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----------  107 (272)
                      .+.+++|+|+|+ |.+|..+++.+...|++|++++++....+.+.+           .+  ..++.+|+           
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-----------lG--a~~~~l~~~~~~~~gya~~  246 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-----------VG--AQWLDLGIDAAGEGGYARE  246 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-----------TT--CEECCCC------------
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC--CeEEeccccccccccchhh
Confidence            467889999998 799999999999999999999998554333321           11  22332221           


Q ss_pred             CChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          108 GFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      ...+....-...+.+.....|+||.++.+.....+.                    .+++..+..|+++.-||.++.-.
T Consensus       247 ~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~--------------------Lvt~emv~~MkpGsVIVDvA~d~  305 (381)
T 3p2y_A          247 LSEAERAQQQQALEDAITKFDIVITTALVPGRPAPR--------------------LVTAAAATGMQPGSVVVDLAGET  305 (381)
T ss_dssp             -CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCC--------------------CBCHHHHHTSCTTCEEEETTGGG
T ss_pred             hhHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccce--------------------eecHHHHhcCCCCcEEEEEeCCC
Confidence            011112233344445557899999987653221111                    11234557788888888888643

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.29  E-value=0.00075  Score=58.70  Aligned_cols=100  Identities=12%  Similarity=0.106  Sum_probs=65.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|++|||+|+ |+||...++.+...|++|++++++.++.+.+.+      +    .+... +  .|..+.+.+       
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~------~----lGa~~-v--i~~~~~~~~-------  238 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ------D----LGADD-Y--VIGSDQAKM-------  238 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT------T----SCCSC-E--EETTCHHHH-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH------H----cCCce-e--eccccHHHH-------
Confidence            7899999995 999999999888899999999887443322210      1    22221 2  234443222       


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .+..+++|++|.++|....                          .+..+..++++|+++.++....
T Consensus       239 ~~~~~g~D~vid~~g~~~~--------------------------~~~~~~~l~~~G~iv~~G~~~~  279 (357)
T 2cf5_A          239 SELADSLDYVIDTVPVHHA--------------------------LEPYLSLLKLDGKLILMGVINN  279 (357)
T ss_dssp             HHSTTTEEEEEECCCSCCC--------------------------SHHHHTTEEEEEEEEECSCCSS
T ss_pred             HHhcCCCCEEEECCCChHH--------------------------HHHHHHHhccCCEEEEeCCCCC
Confidence            2223579999999986210                          1234466788899999987643

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.24  E-value=0.00044  Score=59.24  Aligned_cols=98  Identities=14%  Similarity=0.132  Sum_probs=63.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      |+ |||+|++|++|...++.+...|++|++++++.++.+.+++    +       +... .+  |..+.+.    ++.+ 
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~----l-------Ga~~-vi--~~~~~~~----~~~~-  207 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS----L-------GANR-IL--SRDEFAE----SRPL-  207 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----H-------TCSE-EE--EGGGSSC----CCSS-
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----c-------CCCE-EE--ecCCHHH----HHhh-
Confidence            45 9999999999999999999999999999987554433322    1       2211 12  2222111    1111 


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                       ..+++|+++.++|..                           ..+..+..++++|+++.++....
T Consensus       208 -~~~~~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  245 (324)
T 3nx4_A          208 -EKQLWAGAIDTVGDK---------------------------VLAKVLAQMNYGGCVAACGLAGG  245 (324)
T ss_dssp             -CCCCEEEEEESSCHH---------------------------HHHHHHHTEEEEEEEEECCCTTC
T ss_pred             -cCCCccEEEECCCcH---------------------------HHHHHHHHHhcCCEEEEEecCCC
Confidence             124789998887531                           12345577788999999987654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.23  E-value=0.0005  Score=57.62  Aligned_cols=41  Identities=17%  Similarity=0.271  Sum_probs=35.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchh
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEE   79 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~   79 (272)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a  157 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKA  157 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHH
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            4588999999998 6999999999999996 899999985443

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=97.23  E-value=0.0019  Score=55.77  Aligned_cols=102  Identities=16%  Similarity=0.091  Sum_probs=65.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|+++||+|+ |++|...++.+... |++|++++++.++.+.++       +    .+.. .++  |..+  +   +.+
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-------~----lGa~-~~i--~~~~--~---~~~  229 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-------E----VGAD-AAV--KSGA--G---AAD  229 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-------H----TTCS-EEE--ECST--T---HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-------H----cCCC-EEE--cCCC--c---HHH
Confidence            45899999998 99999998877777 789999988744332221       1    2222 122  2222  2   223


Q ss_pred             HHHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          119 EVVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       119 ~~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .+.+..  .++|+++.++|..                          ...+..+..++++|+++.++...+
T Consensus       230 ~v~~~t~g~g~d~v~d~~G~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~~  274 (345)
T 3jv7_A          230 AIRELTGGQGATAVFDFVGAQ--------------------------STIDTAQQVVAVDGHISVVGIHAG  274 (345)
T ss_dssp             HHHHHHGGGCEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCTT
T ss_pred             HHHHHhCCCCCeEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEECCCCC
Confidence            333322  2799999999862                          134445677788999999987543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.22  E-value=0.00065  Score=57.04  Aligned_cols=41  Identities=12%  Similarity=0.115  Sum_probs=36.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchh
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEE   79 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~   79 (272)
                      .++++|+++|+|+ ||.|++++..|.+.|+ +|++++|+.++.
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a  154 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRF  154 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGG
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence            3578999999997 7999999999999999 899999986543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.21  E-value=0.00068  Score=59.78  Aligned_cols=139  Identities=18%  Similarity=0.194  Sum_probs=81.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEecc-----------
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISAD-----------  106 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----------  106 (272)
                      ..+.+.+|+|+|+ |.+|..+++.+...|++|++++++....+.+.+           .+  ..++..+           
T Consensus       186 g~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-----------~G--~~~~~~~~~~~~d~~~~~  251 (405)
T 4dio_A          186 GTVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-----------LG--AKFIAVEDEEFKAAETAG  251 (405)
T ss_dssp             EEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-----------TT--CEECCCCC----------
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----------cC--Cceeeccccccccccccc
Confidence            3467889999999 799999999999999999999998554333221           11  1222222           


Q ss_pred             -----CCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEE
Q 039897          107 -----LGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIIN  181 (272)
Q Consensus       107 -----~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~  181 (272)
                           ++++ ....-...+.+.....|+||+++.+.....+.                    .+++..+..|+++.-||.
T Consensus       252 ~ya~e~s~~-~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~--------------------Lvt~emv~~Mk~GsVIVD  310 (405)
T 4dio_A          252 GYAKEMSGE-YQVKQAALVAEHIAKQDIVITTALIPGRPAPR--------------------LVTREMLDSMKPGSVVVD  310 (405)
T ss_dssp             -------CH-HHHHHHHHHHHHHHTCSEEEECCCCSSSCCCC--------------------CBCHHHHTTSCTTCEEEE
T ss_pred             chhhhcchh-hhhhhHhHHHHHhcCCCEEEECCcCCCCCCCE--------------------EecHHHHhcCCCCCEEEE
Confidence                 2221 11111223333335799999998764322211                    112345677888888888


Q ss_pred             ecCCC-Cc-cC-ChhHHHHHHHHhhCCeEEEEEe--cccc
Q 039897          182 TTSVE-PL-WH-SPEARGLALQLVERGIRVNGVA--PGPI  216 (272)
Q Consensus       182 vsS~~-~~-~~-~~~~~~la~e~~~~gi~vn~i~--PG~v  216 (272)
                      +++-. +. .. .+..     .+..+||.+.++.  ||.+
T Consensus       311 vA~d~GG~~e~t~~~~-----~~~~~GV~~~gv~nlP~~v  345 (405)
T 4dio_A          311 LAVERGGNIEGAEAGK-----VTEVGGVRIVGHLNVAGRI  345 (405)
T ss_dssp             TTGGGTCSBTTCCTTE-----EEEETTEEEEECSSGGGGG
T ss_pred             EeCCCCCCccccCCCC-----eEEECCEEEEEeCCCCccC
Confidence            88632 11 11 1211     1335677777664  6654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.21  E-value=0.00048  Score=57.97  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=35.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchh
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEE   79 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~   79 (272)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a  163 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKA  163 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHH
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHH
Confidence            4688999999998 6999999999999996 899999985443

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.20  E-value=0.00088  Score=58.24  Aligned_cols=37  Identities=22%  Similarity=0.270  Sum_probs=32.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .|++|||+|++|++|...++.+...|++++++.+..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5899999999999999999988888999888876543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.19  E-value=0.00025  Score=53.35  Aligned_cols=37  Identities=14%  Similarity=0.202  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .+++++|+|+ |++|+.+++.|.+.|++|++.+|+.+.
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~   56 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDH   56 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHH
Confidence            3899999996 999999999999999999999887443

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.0017  Score=57.31  Aligned_cols=117  Identities=16%  Similarity=0.139  Sum_probs=67.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|++|||+|+ |++|...++.+...|+ +|++++++.++.+.+    .   +    .+.  ..  +|.++.+.+.+.+.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a----~---~----lGa--~~--i~~~~~~~~~~~v~~  248 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----K---A----QGF--EI--ADLSLDTPLHEQIAA  248 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----H---H----TTC--EE--EETTSSSCHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH----H---H----cCC--cE--EccCCcchHHHHHHH
Confidence            5899999995 9999999998888899 688887764332222    1   1    232  22  344443322222222


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +.. ..++|++|.++|........+.           .|...+-...+..+..++++|+++.++..
T Consensus       249 ~t~-g~g~Dvvid~~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~G~iv~~G~~  302 (398)
T 1kol_A          249 LLG-EPEVDCAVDAVGFEARGHGHEG-----------AKHEAPATVLNSLMQVTRVAGKIGIPGLY  302 (398)
T ss_dssp             HHS-SSCEEEEEECCCTTCBCSSTTG-----------GGSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             HhC-CCCCCEEEECCCCccccccccc-----------ccccchHHHHHHHHHHHhcCCEEEEeccc
Confidence            211 1269999999986321000000           01111122344566777889999998864

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.17  E-value=0.0019  Score=57.09  Aligned_cols=108  Identities=17%  Similarity=0.186  Sum_probs=65.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|.+|||+|+ |++|...++.+...|+ +|++++++.++.+.+    .++       +.. .  .+|..+.+    +.+
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~l-------Ga~-~--vi~~~~~~----~~~  272 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA----KEL-------GAD-H--VIDPTKEN----FVE  272 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH----HHH-------TCS-E--EECTTTSC----HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHc-------CCC-E--EEcCCCCC----HHH
Confidence            45899999998 9999999998888999 888888764333222    221       211 1  22443332    233


Q ss_pred             HHHHhc-C-CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          119 EVVNAY-G-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       119 ~~~~~~-g-~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .+.+.. + ++|++|.++|....          .+.           .+.+.+...++++|+++.++....
T Consensus       273 ~i~~~t~g~g~D~vid~~g~~~~----------~~~-----------~~~~~l~~~~~~~G~iv~~G~~~~  322 (404)
T 3ip1_A          273 AVLDYTNGLGAKLFLEATGVPQL----------VWP-----------QIEEVIWRARGINATVAIVARADA  322 (404)
T ss_dssp             HHHHHTTTCCCSEEEECSSCHHH----------HHH-----------HHHHHHHHCSCCCCEEEECSCCCS
T ss_pred             HHHHHhCCCCCCEEEECCCCcHH----------HHH-----------HHHHHHHhccCCCcEEEEeCCCCC
Confidence            333333 2 69999999986310          000           111112233378899999987654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.16  E-value=0.0013  Score=58.20  Aligned_cols=38  Identities=26%  Similarity=0.390  Sum_probs=34.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQ   77 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~   77 (272)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+..
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~  202 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYE  202 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence            478999999998 9999999999999999 8999988743

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.16  E-value=0.021  Score=48.99  Aligned_cols=119  Identities=12%  Similarity=0.053  Sum_probs=74.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +.++|.|+|+ |.+|.+++..|++.|.  +|++++++.   ++++....++.+........+.....|   .        
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~---~k~~g~a~DL~~~~~~~~~~v~i~~~~---~--------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNK---EKAMGDVMDLNHGKAFAPQPVKTSYGT---Y--------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH---HHHHHHHHHHHHTGGGSSSCCEEEEEC---G--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecch---HHHHHHHHHHHhccccccCCeEEEeCc---H--------
Confidence            3568999996 9999999999999997  899999873   334433334443211111233332222   1        


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                         +....-|++|.++|.....    ..+.   ...+..|+.-...+.+.+..+ ..++.+++++..
T Consensus        69 ---~a~~~aDvVvi~ag~p~kp----G~~R---~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNP  124 (326)
T 3pqe_A           69 ---EDCKDADIVCICAGANQKP----GETR---LELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNP  124 (326)
T ss_dssp             ---GGGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred             ---HHhCCCCEEEEecccCCCC----CccH---HHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCCh
Confidence               1234789999999974322    2233   234777877777777777665 345677777754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.14  E-value=0.00092  Score=57.97  Aligned_cols=102  Identities=14%  Similarity=0.075  Sum_probs=65.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|.+|||+|+ |+||...++.+...|+ +|++++++.++.+.    +.++       +.. .+  +|..+.+    +.+
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~----~~~l-------Ga~-~v--i~~~~~~----~~~  225 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI----ALEY-------GAT-DI--INYKNGD----IVE  225 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH----HHHH-------TCC-EE--ECGGGSC----HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH----HHHh-------CCc-eE--EcCCCcC----HHH
Confidence            45899999985 9999999998888899 79998876433222    2222       221 12  2333322    333


Q ss_pred             HHHHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          119 EVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       119 ~~~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      .+.+..+  ++|+++.++|...                          ..+..+..++.+|+++.++...
T Consensus       226 ~v~~~t~g~g~D~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~  269 (352)
T 3fpc_A          226 QILKATDGKGVDKVVIAGGDVH--------------------------TFAQAVKMIKPGSDIGNVNYLG  269 (352)
T ss_dssp             HHHHHTTTCCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             HHHHHcCCCCCCEEEECCCChH--------------------------HHHHHHHHHhcCCEEEEecccC
Confidence            3444332  6999999987621                          2334556778899999998654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.13  E-value=0.027  Score=48.60  Aligned_cols=126  Identities=13%  Similarity=0.067  Sum_probs=74.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD  110 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (272)
                      ..++.-+|.|+||+|+||+.++..|++...       .+++.+.++.. ..++-..-++....  .......+   +++.
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~-~~~~Gva~DL~~~~--~~~~~~~~---~~~~   93 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPAL-KALAGVEAELEDCA--FPLLDKVV---VTAD   93 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH-HHHHHHHHHHHHTT--CTTEEEEE---EESC
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCcc-ccchhhhhhhhhcC--ccCCCcEE---EcCC
Confidence            446677999999999999999999987643       68888876432 22332233333321  11111111   1111


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          111 ENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       111 ~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        ..       +.+..-|++|..||.....    ..+.++   .++.|..-.-.+.+.+..+-.++..|+.++-.
T Consensus        94 --~~-------~a~~~advVvi~aG~prkp----GmtR~D---Ll~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           94 --PR-------VAFDGVAIAIMCGAFPRKA----GMERKD---LLEMNARIFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             --HH-------HHTTTCSEEEECCCCCCCT----TCCHHH---HHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             --hH-------HHhCCCCEEEECCCCCCCC----CCCHHH---HHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence              11       1235799999999985432    345544   46778777777777766553344566666643

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.08  E-value=0.0015  Score=52.65  Aligned_cols=73  Identities=14%  Similarity=0.097  Sum_probs=51.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +++|+|+ |.+|..+++.|.++|++|++++++++..+.+.   +         ..+..++..|.++++.+.+.      .
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~---~---------~~~~~~i~gd~~~~~~l~~a------~   62 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFA---K---------KLKATIIHGDGSHKEILRDA------E   62 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH---H---------HSSSEEEESCTTSHHHHHHH------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH---H---------HcCCeEEEcCCCCHHHHHhc------C
Confidence            5899996 99999999999999999999998744322211   1         12356788899887655533      1


Q ss_pred             cCCccEEEEccc
Q 039897          124 YGKIDILVNNAA  135 (272)
Q Consensus       124 ~g~ld~vI~~ag  135 (272)
                      ....|++|.+.+
T Consensus        63 i~~ad~vi~~~~   74 (218)
T 3l4b_C           63 VSKNDVVVILTP   74 (218)
T ss_dssp             CCTTCEEEECCS
T ss_pred             cccCCEEEEecC
Confidence            246788876654

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.08  E-value=0.0047  Score=52.77  Aligned_cols=113  Identities=18%  Similarity=0.185  Sum_probs=71.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC---hHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF---DENCKRVVD  118 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~  118 (272)
                      +|.|+|++|.+|..++..|++.|  ..|++++++.     .+....++.+.    ...     .++..   ..+.++.+ 
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-----~~~~a~dL~~~----~~~-----~~l~~~~~t~d~~~a~-   66 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-----TPGVAADLSHI----ETR-----ATVKGYLGPEQLPDCL-   66 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-----HHHHHHHHTTS----SSS-----CEEEEEESGGGHHHHH-
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-----cHHHHHHHhcc----CcC-----ceEEEecCCCCHHHHh-
Confidence            68999999999999999999888  6899999975     11222223221    111     11111   12233333 


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                            ...|+||+++|.....+    .+..   ..+..|+.....+.+.+..+- .++.|+++|-.
T Consensus        67 ------~~aDvVvi~ag~~~~~g----~~r~---dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNP  119 (314)
T 1mld_A           67 ------KGCDVVVIPAGVPRKPG----MTRD---DLFNTNATIVATLTAACAQHC-PDAMICIISNP  119 (314)
T ss_dssp             ------TTCSEEEECCSCCCCTT----CCGG---GGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSC
T ss_pred             ------CCCCEEEECCCcCCCCC----CcHH---HHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCC
Confidence                  47999999999854321    1211   236778887788877776653 45788887654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.08  E-value=0.00081  Score=59.22  Aligned_cols=41  Identities=22%  Similarity=0.117  Sum_probs=35.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE   79 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~   79 (272)
                      ..+.+++|+|+|+ |++|+.+++.+...|++|++++++....
T Consensus       168 ~~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~  208 (384)
T 1l7d_A          168 GTVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK  208 (384)
T ss_dssp             EEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            3578999999996 8999999999999999999999875543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.08  E-value=0.0019  Score=56.11  Aligned_cols=78  Identities=22%  Similarity=0.208  Sum_probs=51.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|++|||+|+ |++|...++.+... |++|++++++.++.+.++    +       .+.. .  .+|..+.  +.+.+.
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~-------lGa~-~--vi~~~~~--~~~~v~  247 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----R-------LGAD-H--VVDARRD--PVKQVM  247 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----H-------TTCS-E--EEETTSC--HHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----H-------hCCC-E--EEeccch--HHHHHH
Confidence            35899999999 89999999988888 999999988743322221    1       2221 1  2344443  333333


Q ss_pred             HHHHhcC-CccEEEEcccc
Q 039897          119 EVVNAYG-KIDILVNNAAV  136 (272)
Q Consensus       119 ~~~~~~g-~ld~vI~~ag~  136 (272)
                      ++.  .+ ++|++|.++|.
T Consensus       248 ~~~--~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          248 ELT--RGRGVNVAMDFVGS  264 (359)
T ss_dssp             HHT--TTCCEEEEEESSCC
T ss_pred             HHh--CCCCCcEEEECCCC
Confidence            322  13 69999999986

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.07  E-value=0.0015  Score=53.96  Aligned_cols=37  Identities=27%  Similarity=0.328  Sum_probs=31.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      ..|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3578999999997 6799999999999998 67887654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.98  E-value=0.014  Score=50.00  Aligned_cols=121  Identities=12%  Similarity=0.090  Sum_probs=67.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+..+++|.|+|+ |.+|.+++..|+..|.  ++++++++.   +.++-...++.+... ....+....-|   .     
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~---~k~~g~a~DL~~~~~-~~~~~~i~~~~---~-----   71 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFK---DKTKGDAIDLEDALP-FTSPKKIYSAE---Y-----   71 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH---HHHHHHHHHHHTTGG-GSCCCEEEECC---G-----
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCCh---HHHHHHHhhHhhhhh-hcCCcEEEECc---H-----
Confidence            4566789999996 9999999999999988  899999873   334333334443221 11122222211   1     


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                            +.+..-|++|..||.....    ..+.   ...++.|+.-...+.+.+..+ ..++.+++++..
T Consensus        72 ------~a~~~aDiVvi~ag~~~kp----G~tR---~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtNP  127 (326)
T 3vku_A           72 ------SDAKDADLVVITAGAPQKP----GETR---LDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP  127 (326)
T ss_dssp             ------GGGTTCSEEEECCCCC-----------------------CHHHHHHHHHTT-TCCSEEEECSSS
T ss_pred             ------HHhcCCCEEEECCCCCCCC----CchH---HHHHHHHHHHHHHHHHHHHhc-CCceEEEEccCc
Confidence                  2235789999999974321    1121   344677777677777766654 335677777654

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.97  E-value=0.005  Score=53.24  Aligned_cols=120  Identities=12%  Similarity=0.098  Sum_probs=72.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      |.+++|.|+|++|.+|..++..++..|.  +|++++++..   +++....++.+... ...++.+ .      .+..+.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~---k~~g~a~DL~~~~~-~~~~i~~-t------~d~~~al   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAV---GLEGVAEEIRHCGF-EGLNLTF-T------SDIKEAL   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHH---HHHHHHHHHHHHCC-TTCCCEE-E------SCHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCch---hHHHHHHhhhhCcC-CCCceEE-c------CCHHHHh
Confidence            5678999999999999999999999994  7999998743   33333333433210 1112211 1      1122222


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCe-EEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSA-IINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~-iv~vsS~  185 (272)
                             ..-|+||.+||.....    ..+.   .+.+..|+.-...+.+.+..+- .++. +++++..
T Consensus        75 -------~dADvVvitaG~p~kp----G~~R---~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNP  128 (343)
T 3fi9_A           75 -------TDAKYIVSSGGAPRKE----GMTR---EDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNP  128 (343)
T ss_dssp             -------TTEEEEEECCC-----------CH---HHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSS
T ss_pred             -------CCCCEEEEccCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCc
Confidence                   3689999999974321    1222   3456778777777777776653 3453 6666653

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.95  E-value=0.0021  Score=56.40  Aligned_cols=81  Identities=14%  Similarity=0.145  Sum_probs=51.8

Q ss_pred             CCCcEEEEEc-CCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTG-GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtG-as~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ..|.+|||.| |+|++|...++.+...|++|++++++.++.+.++       +    .+... +  +|..+.+ +.+.+.
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-------~----lGa~~-~--~~~~~~~-~~~~v~  233 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-------A----QGAVH-V--CNAASPT-FMQDLT  233 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-------H----TTCSC-E--EETTSTT-HHHHHH
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------h----CCCcE-E--EeCCChH-HHHHHH
Confidence            4688999997 9999999999988889999999988643322221       1    22221 2  2333322 222222


Q ss_pred             HHHHhcCCccEEEEcccc
Q 039897          119 EVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~  136 (272)
                      ++... .++|+++.+.|.
T Consensus       234 ~~t~~-~g~d~v~d~~g~  250 (379)
T 3iup_A          234 EALVS-TGATIAFDATGG  250 (379)
T ss_dssp             HHHHH-HCCCEEEESCEE
T ss_pred             HHhcC-CCceEEEECCCc
Confidence            22221 269999999987

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.93  E-value=0.0053  Score=52.86  Aligned_cols=121  Identities=11%  Similarity=0.060  Sum_probs=72.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--e-----EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA--T-----VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~--~-----v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+|+||||+|.||..++..|+..|.  .     +++++++.. .+.++-...++.+.    .... ......++  +.  
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~-~~~~~g~a~DL~~~----~~~~-~~~~~~~~--~~--   73 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM-MGVLDGVLMELQDC----ALPL-LKDVIATD--KE--   73 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHHT----CCTT-EEEEEEES--CH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCc-cccchhhHhhhHhh----hhcc-cCCEEEcC--Cc--
Confidence            4799999999999999999998776  4     888888632 12333334444432    1111 11111111  11  


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                           .+.+..-|+||+.||.....+    .+.   ...++.|+.....+.+.+..+-.+.-.+++++..
T Consensus        74 -----~~~~~daDvVvitAg~prkpG----~tR---~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           74 -----EIAFKDLDVAILVGSMPRRDG----MER---KDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             -----HHHTTTCSEEEECCSCCCCTT----CCT---TTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             -----HHHhCCCCEEEEeCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence                 122347999999998743211    121   3347788888888888777653322257777653

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.90  E-value=0.037  Score=47.23  Aligned_cols=120  Identities=10%  Similarity=0.105  Sum_probs=73.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++..+|.|+|+ |.+|..++..|+..|.  .+++++++..   +++....++.+.....+..+.... |  +.       
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~---~~~g~~~dl~~~~~~~~~~~~v~~-~--~~-------   69 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTE---KVRGDVMDLKHATPYSPTTVRVKA-G--EY-------   69 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHH---HHHHHHHHHHHHGGGSSSCCEEEE-C--CG-------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChh---HhhhhhhhHHhhhhhcCCCeEEEe-C--CH-------
Confidence            45568999998 9999999999999884  8999998743   333323333322111112333222 2  11       


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                          +.+..-|+||..+|.....    ..+..   ..+..|+.-...+.+.+..+ ..++.|++++-.
T Consensus        70 ----~a~~~aDvVvi~ag~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP  125 (317)
T 3d0o_A           70 ----SDCHDADLVVICAGAAQKP----GETRL---DLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNP  125 (317)
T ss_dssp             ----GGGTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred             ----HHhCCCCEEEECCCCCCCC----CCcHH---HHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCc
Confidence                1234799999999984332    22332   34677777667777777666 456777776543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.81  E-value=0.0012  Score=53.83  Aligned_cols=71  Identities=6%  Similarity=-0.038  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .++++|.|+ |.+|+.+++.|.+.|+ |+++++++...+.+             . .++.++..|.++++.+.+.     
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~-------------~-~~~~~i~gd~~~~~~l~~a-----   67 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL-------------R-SGANFVHGDPTRVSDLEKA-----   67 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH-------------H-TTCEEEESCTTCHHHHHHT-----
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH-------------h-cCCeEEEcCCCCHHHHHhc-----
Confidence            457889997 8999999999999999 99998874432211             1 2356677777776544332     


Q ss_pred             HhcCCccEEEEcc
Q 039897          122 NAYGKIDILVNNA  134 (272)
Q Consensus       122 ~~~g~ld~vI~~a  134 (272)
                       .....|.+|.+.
T Consensus        68 -~i~~ad~vi~~~   79 (234)
T 2aef_A           68 -NVRGARAVIVDL   79 (234)
T ss_dssp             -TCTTCSEEEECC
T ss_pred             -CcchhcEEEEcC
Confidence             012456666554

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.80  E-value=0.033  Score=47.81  Aligned_cols=120  Identities=12%  Similarity=0.117  Sum_probs=75.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ...++|.|+|+ |.+|..++..|+..|.  .+++.+++.   +.++....++.+...-. .....+..  .+.+      
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~---~~~~g~a~DL~~~~~~~-~~~~i~~~--~d~~------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIE---DKLKGEMMDLQHGSLFL-KTPKIVSS--KDYS------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH---HHHHHHHHHHHHTGGGC-SCCEEEEC--SSGG------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCCh---HHHHHHHHhhhhhhhcc-CCCeEEEc--CCHH------
Confidence            55678999997 9999999999999997  899999873   33444444444321111 11112211  1211      


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                           ....-|++|.+||.....    ..+.   .+.++.|+.-...+.+.+..+ ..++.+++++..
T Consensus        84 -----~~~~aDiVvi~aG~~~kp----G~tR---~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP  138 (331)
T 4aj2_A           84 -----VTANSKLVIITAGARQQE----GESR---LNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNP  138 (331)
T ss_dssp             -----GGTTEEEEEECCSCCCCT----TCCG---GGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred             -----HhCCCCEEEEccCCCCCC----CccH---HHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCh
Confidence                 124799999999985332    1222   235677777777777777665 456777777754

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.79  E-value=0.056  Score=45.58  Aligned_cols=117  Identities=15%  Similarity=0.066  Sum_probs=70.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+|+ |.+|.+++..|++.|.  +|++.++++...+   ...-++.+..............  +|.+          
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~---g~~~dl~~~~~~~~~~~~i~~t--~d~~----------   65 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAV---GEAMDLAHAAAGIDKYPKIVGG--ADYS----------   65 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHH---HHHHHHHHHHHTTTCCCEEEEE--SCGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHH---HHHHHHHhhhhhcCCCCEEEEe--CCHH----------
Confidence            6889999 9999999999999998  8999999854432   1122222211111111222111  1111          


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                       ....-|++|..+|.....    ..+..+   .+..|+.-...+.+.+..+ ..++.+++++..
T Consensus        66 -a~~~aDiVViaag~~~kp----G~~R~d---l~~~N~~i~~~i~~~i~~~-~p~a~iivvsNP  120 (294)
T 1oju_A           66 -LLKGSEIIVVTAGLARKP----GMTRLD---LAHKNAGIIKDIAKKIVEN-APESKILVVTNP  120 (294)
T ss_dssp             -GGTTCSEEEECCCCCCCS----SCCHHH---HHHHHHHHHHHHHHHHHTT-STTCEEEECSSS
T ss_pred             -HhCCCCEEEECCCCCCCC----CCcHHH---HHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCc
Confidence             124689999999985332    233333   4677776666666666655 446778877754

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.77  E-value=0.013  Score=50.36  Aligned_cols=107  Identities=9%  Similarity=0.065  Sum_probs=64.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeE-EEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATV-AFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v-~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ....|++|||+|+ |++|...+..+...|+.+ +++++++++.+.    +.+       .+.. ..+  |.++.+ ..+.
T Consensus       157 ~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~----a~~-------lGa~-~~i--~~~~~~-~~~~  220 (346)
T 4a2c_A          157 QGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL----AKS-------FGAM-QTF--NSSEMS-APQM  220 (346)
T ss_dssp             TCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----HHH-------TTCS-EEE--ETTTSC-HHHH
T ss_pred             ccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH----HHH-------cCCe-EEE--eCCCCC-HHHH
Confidence            3356899999987 899999999888899875 556665332221    111       2322 222  333322 2233


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .+.+. ..+..|+++.++|...                          ..+..+..++.+|+++.++....
T Consensus       221 ~~~~~-~~~g~d~v~d~~G~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  264 (346)
T 4a2c_A          221 QSVLR-ELRFNQLILETAGVPQ--------------------------TVELAVEIAGPHAQLALVGTLHQ  264 (346)
T ss_dssp             HHHHG-GGCSSEEEEECSCSHH--------------------------HHHHHHHHCCTTCEEEECCCCSS
T ss_pred             HHhhc-ccCCcccccccccccc--------------------------hhhhhhheecCCeEEEEEeccCC
Confidence            33332 2357899998887521                          12234456678899999887654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.65  E-value=0.036  Score=47.41  Aligned_cols=121  Identities=14%  Similarity=0.102  Sum_probs=73.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      |+.++|.|+|+ |.+|.+++..|++.|. +|++.+++....+..   ..++.+..............  .+.        
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~---a~dL~~~~~~~~~~~~v~~t--~d~--------   68 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGK---ALDLLQTCPIEGVDFKVRGT--NDY--------   68 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHH---HHHHHTTHHHHTCCCCEEEE--SCG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHH---HHHHHhhhhhcCCCcEEEEc--CCH--------
Confidence            44578999994 9999999999999988 999999986543322   22333211101112222211  111        


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                         +.+..-|+||..+|.....    ..+..   ..+..|+.-...+.+.+..+- .++.+++++-.
T Consensus        69 ---~a~~~aDvVIi~ag~p~k~----G~~R~---dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNP  124 (321)
T 3p7m_A           69 ---KDLENSDVVIVTAGVPRKP----GMSRD---DLLGINIKVMQTVGEGIKHNC-PNAFVICITNP  124 (321)
T ss_dssp             ---GGGTTCSEEEECCSCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred             ---HHHCCCCEEEEcCCcCCCC----CCCHH---HHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCc
Confidence               1234689999999975332    23333   345667777777777766653 45677777643

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.63  E-value=0.048  Score=46.68  Aligned_cols=121  Identities=14%  Similarity=0.114  Sum_probs=71.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      |+.++|.|+|+ |.+|.+++..|+..|. +|++.+++....+.....+....... ....++.. ..|   .        
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~-~~~~~v~~-t~d---~--------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVD-GFDAKFTG-AND---Y--------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHH-TCCCCEEE-ESS---G--------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhc-CCCCEEEE-eCC---H--------
Confidence            56678999998 9999999999999998 99999998654332222222211100 01122211 122   1        


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                         +.+..-|+||..+|.....+    .+.   ...+..|+.-...+.+.+..+ ..++.+++++..
T Consensus        71 ---~a~~~aDiVIiaag~p~k~G----~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvtNP  126 (324)
T 3gvi_A           71 ---AAIEGADVVIVTAGVPRKPG----MSR---DDLLGINLKVMEQVGAGIKKY-APEAFVICITNP  126 (324)
T ss_dssp             ---GGGTTCSEEEECCSCCCC------------CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred             ---HHHCCCCEEEEccCcCCCCC----CCH---HHHHHhhHHHHHHHHHHHHHH-CCCeEEEecCCC
Confidence               12247899999999743221    122   234566776666666666655 345777777754

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.57  E-value=0.0081  Score=51.69  Aligned_cols=37  Identities=16%  Similarity=0.276  Sum_probs=31.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            578999999986 7899999999999998 688887653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.57  E-value=0.078  Score=45.16  Aligned_cols=122  Identities=19%  Similarity=0.155  Sum_probs=73.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc--chhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS--QEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .++.++|.|+|+ |.+|..++..|++.|. +|++.++++  ...+..   ..++.+..............  ++.     
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~---a~dl~~~~~~~~~~~~i~~t--~d~-----   73 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGK---ALDMLEASPVQGFDANIIGT--SDY-----   73 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHH---HHHHHHHHHHHTCCCCEEEE--SCG-----
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHh---hhhHHHhhhhccCCCEEEEc--CCH-----
Confidence            356788999997 9999999999999999 999999973  222211   12222111001111111111  111     


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                            +.+..-|++|.++|.....    ..+.   .+.+..|+.-...+.+.+..+ ..++.+++++-.
T Consensus        74 ------~a~~~aDvVIiaag~p~kp----g~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNP  129 (315)
T 3tl2_A           74 ------ADTADSDVVVITAGIARKP----GMSR---DDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNP  129 (315)
T ss_dssp             ------GGGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred             ------HHhCCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCCh
Confidence                  1235799999999985332    2333   345677777777777777665 345777777753

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.57  E-value=0.0027  Score=54.22  Aligned_cols=97  Identities=18%  Similarity=0.286  Sum_probs=63.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+||+|++|...++.+...|++|+.+.+.    ++ .+.+.++       +.. .  .+|..+.+.+.     
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~----~~-~~~~~~l-------Ga~-~--~i~~~~~~~~~-----  210 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK----RN-HAFLKAL-------GAE-Q--CINYHEEDFLL-----  210 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH----HH-HHHHHHH-------TCS-E--EEETTTSCHHH-----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc----ch-HHHHHHc-------CCC-E--EEeCCCcchhh-----
Confidence            468999999999999999999999999999888643    12 2222222       211 1  23444433122     


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        +...++|+++.+.|..                          . ++..+..++++|+++.++..
T Consensus       211 --~~~~g~D~v~d~~g~~--------------------------~-~~~~~~~l~~~G~iv~~g~~  247 (321)
T 3tqh_A          211 --AISTPVDAVIDLVGGD--------------------------V-GIQSIDCLKETGCIVSVPTI  247 (321)
T ss_dssp             --HCCSCEEEEEESSCHH--------------------------H-HHHHGGGEEEEEEEEECCST
T ss_pred             --hhccCCCEEEECCCcH--------------------------H-HHHHHHhccCCCEEEEeCCC
Confidence              1225799999998851                          0 12345777888999988653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.55  E-value=0.0037  Score=54.31  Aligned_cols=87  Identities=18%  Similarity=0.223  Sum_probs=55.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchh----------------hhHHHHHHHHHHhhhcCCCCc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEE----------------KDAQETLEILREAKTSDAKDP  100 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~  100 (272)
                      .+|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.-+.                .+.....+.+.+.  .+..++
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~--np~v~v  190 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKR--NSEISV  190 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH--CTTSEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHH--CCCCeE
Confidence            3578999999997 8899999999999997 688888753111                1222222333321  134556


Q ss_pred             eEEeccCCChHHHHHHHHHHHHhcCCccEEEEccc
Q 039897          101 MAISADLGFDENCKRVVDEVVNAYGKIDILVNNAA  135 (272)
Q Consensus       101 ~~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag  135 (272)
                      ..+..+++...++..        +...|+||.+..
T Consensus       191 ~~~~~~i~~~~~~~~--------~~~~DlVvd~~D  217 (353)
T 3h5n_A          191 SEIALNINDYTDLHK--------VPEADIWVVSAD  217 (353)
T ss_dssp             EEEECCCCSGGGGGG--------SCCCSEEEECCC
T ss_pred             EEeecccCchhhhhH--------hccCCEEEEecC
Confidence            666666665543222        357888887653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.54  E-value=0.0033  Score=52.83  Aligned_cols=39  Identities=18%  Similarity=0.263  Sum_probs=34.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~   77 (272)
                      .++++|++||+|+ ||.|++++..|.+.|+ +|.++.|+.+
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~  157 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPE  157 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence            4578999999997 6999999999999999 8999998743

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.48  E-value=0.091  Score=45.05  Aligned_cols=39  Identities=21%  Similarity=0.152  Sum_probs=33.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhh
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKD   81 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~   81 (272)
                      ..+|.|+|+ |.+|.+++..|++.|. +|++.+++.+..+.
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~   48 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEG   48 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHH
Confidence            458999998 9999999999999998 99999998654443

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.46  E-value=0.14  Score=43.91  Aligned_cols=118  Identities=14%  Similarity=0.121  Sum_probs=72.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEE-eccCCChHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAI-SADLGFDENCKRVV  117 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~  117 (272)
                      ..++|.|+|+ |.+|..++..|+..|.  .|++.+++..   .++....++.+... ........ ..|..         
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~---~~~g~a~DL~~~~~-~~~~~~i~~t~d~~---------   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMED---KLKGEMMDLEHGSL-FLHTAKIVSGKDYS---------   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHH---HHHHHHHHHHHHGG-GSCCSEEEEESSSC---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHH---HHHHHHHHhhhhhh-cccCCeEEEcCCHH---------
Confidence            3568999999 9999999999999997  8999999743   33333333433211 11111111 22321         


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                           .+..-|++|.+||.....+    .+.   .+.+..|+.-...+.+.+..+ ..++.+++++..
T Consensus        86 -----~~~daDiVIitaG~p~kpG----~tR---~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNP  140 (330)
T 3ldh_A           86 -----VSAGSKLVVITAGARQQEG----ESR---LNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPEL  140 (330)
T ss_dssp             -----SCSSCSEEEECCSCCCCSS----CCT---TGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred             -----HhCCCCEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCc
Confidence                 1247899999999854322    121   124556665566666666665 456777777754

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.46  E-value=0.01  Score=52.32  Aligned_cols=117  Identities=16%  Similarity=0.121  Sum_probs=66.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|++|||+|+ |++|...++.+...|+ +|++++++.++.+.+       ++    .+.  ..  +|..+.+.+.+.+.
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-------~~----lGa--~~--i~~~~~~~~~~~~~  247 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-------SD----AGF--ET--IDLRNSAPLRDQID  247 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-------HT----TTC--EE--EETTSSSCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-------HH----cCC--cE--EcCCCcchHHHHHH
Confidence            35899999996 9999999998888899 899998874332221       11    222  33  34443222122222


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      ++.. ..++|++|.++|....... .+..           ........+..+..++++|+++.++..
T Consensus       248 ~~~~-g~g~Dvvid~~g~~~~~~~-~~~~-----------~~~~~~~~~~~~~~l~~gG~iv~~G~~  301 (398)
T 2dph_A          248 QILG-KPEVDCGVDAVGFEAHGLG-DEAN-----------TETPNGALNSLFDVVRAGGAIGIPGIY  301 (398)
T ss_dssp             HHHS-SSCEEEEEECSCTTCBCSG-GGTT-----------SBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred             HHhC-CCCCCEEEECCCCcccccc-cccc-----------ccccHHHHHHHHHHHhcCCEEEEeccc
Confidence            2211 1269999999986320000 0000           000011234455677888999988865

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.43  E-value=0.0042  Score=49.55  Aligned_cols=37  Identities=16%  Similarity=0.303  Sum_probs=32.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEK   80 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~   80 (272)
                      +++|+||+|.+|.++++.|++.|++|++++|+.+..+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~   38 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE   38 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            6899999999999999999999999999998754433

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.43  E-value=0.059  Score=45.01  Aligned_cols=42  Identities=19%  Similarity=0.215  Sum_probs=34.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQET   85 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~   85 (272)
                      ++|.|.|+ |.+|..+|..|++.|++|++.+++++..+...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            57888875 7899999999999999999999986655544443

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.39  E-value=0.0051  Score=51.28  Aligned_cols=40  Identities=23%  Similarity=0.166  Sum_probs=35.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA   82 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~   82 (272)
                      +|+++|+|+ ||.|++++..|++.|.+|.++.|+.++.+.+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~l  157 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFF  157 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            899999997 8999999999999999999999986654444

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.28  E-value=0.0054  Score=52.34  Aligned_cols=37  Identities=35%  Similarity=0.404  Sum_probs=35.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      ++.|++++|.|++.-+|+.+|+.|+..|++|.+++|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~  210 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN  210 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence            7999999999999889999999999999999999886

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.28  E-value=0.013  Score=54.19  Aligned_cols=37  Identities=16%  Similarity=0.276  Sum_probs=32.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            578999999986 6899999999999998 688888754

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.26  E-value=0.007  Score=50.64  Aligned_cols=38  Identities=34%  Similarity=0.463  Sum_probs=35.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .+++||+++|+|.++-+|+.++..|.+.|++|.++.++
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            57999999999999999999999999999999999765

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.24  E-value=0.019  Score=55.32  Aligned_cols=99  Identities=19%  Similarity=0.239  Sum_probs=63.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.+|||.|++||+|.+.++.....|++|+.+..+. +.+.+.            .+.. ..  +|..+.+    +.+.
T Consensus       344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~------------lga~-~v--~~~~~~~----~~~~  403 (795)
T 3slk_A          344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE------------LSRE-HL--ASSRTCD----FEQQ  403 (795)
T ss_dssp             CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC------------SCGG-GE--ECSSSST----HHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh------------cChh-he--eecCChh----HHHH
Confidence            4589999999999999999998888899999987653 211110            1111 11  2333322    3334


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +.+..  .++|+++++.|...                           ++..+..++++|++|.++..
T Consensus       404 i~~~t~g~GvDvVld~~gg~~---------------------------~~~~l~~l~~~Gr~v~iG~~  444 (795)
T 3slk_A          404 FLGATGGRGVDVVLNSLAGEF---------------------------ADASLRMLPRGGRFLELGKT  444 (795)
T ss_dssp             HHHHSCSSCCSEEEECCCTTT---------------------------THHHHTSCTTCEEEEECCST
T ss_pred             HHHHcCCCCeEEEEECCCcHH---------------------------HHHHHHHhcCCCEEEEeccc
Confidence            44433  26999999876410                           12344667788999888754

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.22  E-value=0.031  Score=48.03  Aligned_cols=103  Identities=15%  Similarity=0.184  Sum_probs=60.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .-.|.++||+|+ |++|...+..+... |++|+++++++++.+.+    .   +    .+.. .  ..|.++.+.    .
T Consensus       161 ~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~----~---~----~Ga~-~--~i~~~~~~~----~  221 (348)
T 4eez_A          161 VKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA----K---K----IGAD-V--TINSGDVNP----V  221 (348)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH----H---H----TTCS-E--EEEC-CCCH----H
T ss_pred             CCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhh----h---h----cCCe-E--EEeCCCCCH----H
Confidence            346899999987 77777777777655 78999998874332211    1   1    2222 2  234444332    2


Q ss_pred             HHHHHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          118 DEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       118 ~~~~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      +++.+..+  ++|.++.+++...                          .....+..++.+|+++.++...
T Consensus       222 ~~v~~~t~g~g~d~~~~~~~~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  266 (348)
T 4eez_A          222 DEIKKITGGLGVQSAIVCAVARI--------------------------AFEQAVASLKPMGKMVAVAVPN  266 (348)
T ss_dssp             HHHHHHTTSSCEEEEEECCSCHH--------------------------HHHHHHHTEEEEEEEEECCCCS
T ss_pred             HHhhhhcCCCCceEEEEeccCcc--------------------------hhheeheeecCCceEEEEeccC
Confidence            33333333  5788888776521                          1233446678889999887644

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.22  E-value=0.0057  Score=52.35  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=33.7

Q ss_pred             Cc-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhh
Q 039897           42 GK-VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEK   80 (272)
Q Consensus        42 ~k-~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~   80 (272)
                      |+ +|||+|++|++|..+++.+...|++|++++++.++.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~  189 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD  189 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            44 8999999999999999999899999999998755443

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.21  E-value=0.021  Score=47.07  Aligned_cols=37  Identities=19%  Similarity=0.257  Sum_probs=32.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQ   77 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~   77 (272)
                      .+++ +++|.|+ ||.|++++..|.+.|+ +|++++|+.+
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~  143 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIE  143 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence            3678 8999997 8999999999999999 8999999743

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.16  E-value=0.039  Score=46.14  Aligned_cols=90  Identities=13%  Similarity=0.099  Sum_probs=57.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecccchhhhHHHHH-----HHHHHhhhcCCCCceEEeccCCChHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA---TVAFTYVKSQEEKDAQETL-----EILREAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~---~v~i~~r~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      +.+++.|+|+ |.+|.+++..|.+.|+   +|++.+|+++..+.+.+..     ....+..  ...++.++.+   .++.
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~--~~aDvVilav---~p~~   75 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGA--LNADVVVLAV---KPHQ   75 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHH--SSCSEEEECS---CGGG
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHH--hcCCeEEEEe---CHHH
Confidence            3467888887 8999999999999998   8999999866554443321     0011110  2334444444   3567


Q ss_pred             HHHHHHHHHHh-cCCccEEEEcccc
Q 039897          113 CKRVVDEVVNA-YGKIDILVNNAAV  136 (272)
Q Consensus       113 ~~~~~~~~~~~-~g~ld~vI~~ag~  136 (272)
                      +.++++++... ...=.++|++++.
T Consensus        76 ~~~vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           76 IKMVCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHHHHhhccCCCeEEEEecCC
Confidence            78888887765 4333377776654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.15  E-value=0.0082  Score=52.29  Aligned_cols=37  Identities=27%  Similarity=0.356  Sum_probs=33.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      +|.||+|+|+|. |.+|..+|+.|.+.|++|++.+++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~  206 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNK  206 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            699999999996 8899999999999999999888763

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.09  E-value=0.011  Score=52.48  Aligned_cols=73  Identities=10%  Similarity=0.080  Sum_probs=48.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      .+|+|.|. |.+|+.+++.|.+.|+.|+++++++...+.+.       .    .  ...++..|.++++.++++      
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-------~----~--g~~vi~GDat~~~~L~~a------   64 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-------K----F--GMKVFYGDATRMDLLESA------   64 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-------H----T--TCCCEESCTTCHHHHHHT------
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-------h----C--CCeEEEcCCCCHHHHHhc------
Confidence            46889986 88999999999999999999999854322221       1    1  244567777776654433      


Q ss_pred             hcCCccEEEEccc
Q 039897          123 AYGKIDILVNNAA  135 (272)
Q Consensus       123 ~~g~ld~vI~~ag  135 (272)
                      .....|+||.+.+
T Consensus        65 gi~~A~~viv~~~   77 (413)
T 3l9w_A           65 GAAKAEVLINAID   77 (413)
T ss_dssp             TTTTCSEEEECCS
T ss_pred             CCCccCEEEECCC
Confidence            1124566665553

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.09  E-value=0.026  Score=47.66  Aligned_cols=80  Identities=14%  Similarity=0.181  Sum_probs=52.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++|.|+||.|.+|.+++..|.+.|++|++.+++...  ...+.+         ...++.++.+-.   ..+.++++++..
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~---------~~aDvVilavp~---~~~~~vl~~l~~   87 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESIL---------ANADVVIVSVPI---NLTLETIERLKP   87 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHH---------TTCSEEEECSCG---GGHHHHHHHHGG
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHh---------cCCCEEEEeCCH---HHHHHHHHHHHh
Confidence            579999999999999999999999999999987542  111111         345556555433   346677777654


Q ss_pred             hcCCccEEEEcccc
Q 039897          123 AYGKIDILVNNAAV  136 (272)
Q Consensus       123 ~~g~ld~vI~~ag~  136 (272)
                      ....=.+|+..+++
T Consensus        88 ~l~~~~iv~~~~sv  101 (298)
T 2pv7_A           88 YLTENMLLADLTSV  101 (298)
T ss_dssp             GCCTTSEEEECCSC
T ss_pred             hcCCCcEEEECCCC
Confidence            43322355555444

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.09  E-value=0.15  Score=43.56  Aligned_cols=119  Identities=11%  Similarity=0.054  Sum_probs=71.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      -+..+|.|+|+ |.+|..++..|+..+.  .+++.+++.   ++++....++.+... ....+.... |  +.+      
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~---~~~~g~~~dl~~~~~-~~~~~~i~~-~--~~~------   72 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFK---DKTKGDAIDLSNALP-FTSPKKIYS-A--EYS------   72 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH---HHHHHHHHHHHTTGG-GSCCCEEEE-C--CGG------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCc---hHhHHHHHHHHHHHH-hcCCeEEEE-C--CHH------
Confidence            34468999999 9999999999998886  799999863   334443444443211 112232222 2  111      


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                           .+..-|+||..+|.....    ..+..   ..+..|+.-...+.+.+..+ ..++.|++++-.
T Consensus        73 -----a~~~aDvVii~ag~~~k~----g~~R~---dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP  127 (326)
T 2zqz_A           73 -----DAKDADLVVITAGAPQKP----GETRL---DLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP  127 (326)
T ss_dssp             -----GGGGCSEEEECCCCC---------CHH---HHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSS
T ss_pred             -----HhCCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCc
Confidence                 124789999999984322    12332   34566766666666666555 346777777543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.07  E-value=0.012  Score=48.63  Aligned_cols=95  Identities=9%  Similarity=0.106  Sum_probs=53.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHh--hhcCCCCceEEeccCCChHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREA--KTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .+.+.++.|.|+ |.+|..++..|.+.|++ |.+.+|+++..+.+.+... +...  ....-.++..+-. ...+..+.+
T Consensus         7 ~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~Dvvi~-av~~~~~~~   83 (266)
T 3d1l_A            7 SIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE-AEYTTDLAEVNPYAKLYIV-SLKDSAFAE   83 (266)
T ss_dssp             CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT-CEEESCGGGSCSCCSEEEE-CCCHHHHHH
T ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC-CceeCCHHHHhcCCCEEEE-ecCHHHHHH
Confidence            345567999996 99999999999999998 8888887544333222100 0000  0001112222222 223345677


Q ss_pred             HHHHHHHhcCCccEEEEcccc
Q 039897          116 VVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      +++++......=.++|++.+.
T Consensus        84 v~~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           84 LLQGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHHHTTCCTTCEEEECCTT
T ss_pred             HHHHHHhhcCCCcEEEECCCC
Confidence            777776543333467777654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.06  E-value=0.17  Score=42.96  Aligned_cols=117  Identities=17%  Similarity=0.180  Sum_probs=68.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+|+ |.+|..++..|++.|.  .|+++++++...+..   ..++.+..............|.  .           
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~---a~DL~~~~~~~~~~~~v~~~~~--~-----------   64 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGK---ALDMRESSPIHGFDTRVTGTND--Y-----------   64 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHH---HHHHHHHHHHHTCCCEEEEESS--S-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHH---HHHHhccccccCCCcEEEECCC--H-----------
Confidence            6889996 9999999999999987  899999986443322   2223221110112222221111  1           


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +.+..-|++|.++|.....+    .+.   ...+..|+.-...+.+.+..+ ..++.+++++..
T Consensus        65 ~a~~~aDvVii~ag~~~kpG----~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNP  120 (314)
T 3nep_X           65 GPTEDSDVCIITAGLPRSPG----MSR---DDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANP  120 (314)
T ss_dssp             GGGTTCSEEEECCCC-----------C---HHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSS
T ss_pred             HHhCCCCEEEECCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCc
Confidence            12347999999999843221    121   344677776666666666654 345777777754

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.04  E-value=0.2  Score=42.89  Aligned_cols=38  Identities=16%  Similarity=0.150  Sum_probs=32.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhh
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKD   81 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~   81 (272)
                      ++|.|+|+ |.+|..++..|++.|. +|++.+++.+..+.
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~   53 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQG   53 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence            58999998 9999999999999998 99999998654443

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.00  E-value=0.056  Score=45.47  Aligned_cols=113  Identities=20%  Similarity=0.204  Sum_probs=75.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++.||++.|.| .|.||.++|+.|...|++|+..+++....+                .  ..       ..+++++++
T Consensus       118 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~--~~-------~~~~l~ell  171 (290)
T 3gvx_A          118 TLLYGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQN----------------V--DV-------ISESPADLF  171 (290)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTT----------------C--SE-------ECSSHHHHH
T ss_pred             eeeecchheeec-cCchhHHHHHHHHhhCcEEEEEeccccccc----------------c--cc-------ccCChHHHh
Confidence            469999999998 589999999999999999999988743311                0  11       112344555


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHH
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGL  197 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~l  197 (272)
                      .       .-|+|+.+.........+  +                   ....+..|+++..+|++|......    .+.|
T Consensus       172 ~-------~aDiV~l~~P~t~~t~~l--i-------------------~~~~l~~mk~gailIN~aRG~~vd----~~aL  219 (290)
T 3gvx_A          172 R-------QSDFVLIAIPLTDKTRGM--V-------------------NSRLLANARKNLTIVNVARADVVS----KPDM  219 (290)
T ss_dssp             H-------HCSEEEECCCCCTTTTTC--B-------------------SHHHHTTCCTTCEEEECSCGGGBC----HHHH
T ss_pred             h-------ccCeEEEEeeccccchhh--h-------------------hHHHHhhhhcCceEEEeehhcccC----Ccch
Confidence            4       479998888653221111  1                   134568889888999998754332    5666


Q ss_pred             HHHHhhCCeEE
Q 039897          198 ALQLVERGIRV  208 (272)
Q Consensus       198 a~e~~~~gi~v  208 (272)
                      ...+...+|.-
T Consensus       220 ~~aL~~g~i~g  230 (290)
T 3gvx_A          220 IGFLKERSDVW  230 (290)
T ss_dssp             HHHHHHCTTCE
T ss_pred             hhhhhhccceE
Confidence            66666555543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.00  E-value=0.063  Score=45.72  Aligned_cols=117  Identities=11%  Similarity=0.075  Sum_probs=76.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.|. |.||+++|+.|...|++|+..+|+.+..                  ..+....    ...+++++
T Consensus       134 ~~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~------------------~~~~~~~----~~~~l~el  190 (315)
T 3pp8_A          134 EYTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSW------------------PGVESYV----GREELRAF  190 (315)
T ss_dssp             CCCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCC------------------TTCEEEE----SHHHHHHH
T ss_pred             CCCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhh------------------hhhhhhc----ccCCHHHH
Confidence            35689999999985 8999999999999999999998874321                  1111111    12344554


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.........+                     +....+..|+++.-+|+++......    ...
T Consensus       191 l~-------~aDiV~l~~Plt~~t~~l---------------------i~~~~l~~mk~gailIN~aRG~~vd----~~a  238 (315)
T 3pp8_A          191 LN-------QTRVLINLLPNTAQTVGI---------------------INSELLDQLPDGAYVLNLARGVHVQ----EAD  238 (315)
T ss_dssp             HH-------TCSEEEECCCCCGGGTTC---------------------BSHHHHTTSCTTEEEEECSCGGGBC----HHH
T ss_pred             Hh-------hCCEEEEecCCchhhhhh---------------------ccHHHHhhCCCCCEEEECCCChhhh----HHH
Confidence            43       579998887653221111                     1133467788888899988753322    566


Q ss_pred             HHHHHhhCCeEE
Q 039897          197 LALQLVERGIRV  208 (272)
Q Consensus       197 la~e~~~~gi~v  208 (272)
                      |...+....|.-
T Consensus       239 L~~aL~~g~i~g  250 (315)
T 3pp8_A          239 LLAALDSGKLKG  250 (315)
T ss_dssp             HHHHHHHTSEEE
T ss_pred             HHHHHHhCCccE
Confidence            777776665653

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.97  E-value=0.0092  Score=49.65  Aligned_cols=39  Identities=13%  Similarity=0.186  Sum_probs=35.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      ++||+++|.|.++-+|+.+++.|.+.|++|.++.++..+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~  186 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKD  186 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCccc
Confidence            899999999999999999999999999999999876443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.96  E-value=0.18  Score=42.93  Aligned_cols=116  Identities=13%  Similarity=0.113  Sum_probs=69.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+|.|+|+ |.+|..++..|+..+.  .+++.+++.   ++++....++.+... ....+.+.. |  +.          
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~---~~~~g~~~dl~~~~~-~~~~~~v~~-~--~~----------   67 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK---DRTKGDALDLEDAQA-FTAPKKIYS-G--EY----------   67 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH---HHHHHHHHHHHGGGG-GSCCCEEEE-C--CG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCc---hHHHHHHHHHHHHHH-hcCCeEEEE-C--CH----------
Confidence            58999998 9999999999999886  799999963   334444444443221 112333222 2  11          


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                       +.+..-|+||..+|.....+    .+.   .+.+..|+.-...+.+.+..+ ..++.|++++-.
T Consensus        68 -~a~~~aDvVii~ag~~~~~g----~~R---~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP  123 (318)
T 1ez4_A           68 -SDCKDADLVVITAGAPQKPG----ESR---LDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANP  123 (318)
T ss_dssp             -GGGTTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred             -HHhCCCCEEEECCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCc
Confidence             12357999999999843221    111   224566666666666666555 446777777543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.96  E-value=0.014  Score=48.80  Aligned_cols=39  Identities=33%  Similarity=0.363  Sum_probs=35.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+++||+++|.|.++-+|+.++..|+..|++|.++.++.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            569999999999999999999999999999999997753

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.94  E-value=0.2  Score=42.41  Aligned_cols=116  Identities=17%  Similarity=0.084  Sum_probs=71.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|.|+|+ |.+|..++..|+..+  ..+++.+++.   ++++....++.+... ....+.+.. +  +.+         
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~---~k~~g~a~dl~~~~~-~~~~~~v~~-~--~~~---------   63 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDR---KLAQAHAEDILHATP-FAHPVWVWA-G--SYG---------   63 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH---HHHHHHHHHHHTTGG-GSCCCEEEE-C--CGG---------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh---hHHHHHHHHHHHhHh-hcCCeEEEE-C--CHH---------
Confidence            36899998 999999999999887  5899999973   334333444443211 112222222 1  222         


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        .+..-|+||..+|.....    ..+..   ..+..|..-...+.+.+..+ ..++.|++++-.
T Consensus        64 --a~~~aD~Vii~ag~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP  118 (310)
T 2xxj_A           64 --DLEGARAVVLAAGVAQRP----GETRL---QLLDRNAQVFAQVVPRVLEA-APEAVLLVATNP  118 (310)
T ss_dssp             --GGTTEEEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred             --HhCCCCEEEECCCCCCCC----CcCHH---HHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCc
Confidence              134799999999985432    22333   34666766666666666555 446777777543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.90  E-value=0.053  Score=44.47  Aligned_cols=77  Identities=10%  Similarity=0.124  Sum_probs=55.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +|+|.|++|.+|+.+++.+.+. |+.++.+.....+.+.+   +.        .  ++. +.+|++.++.+.+.+....+
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~---~~--------~--~~D-vvIDfT~p~a~~~~~~~a~~   67 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLL---TD--------G--NTE-VVIDFTHPDVVMGNLEFLID   67 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHH---HH--------T--TCC-EEEECSCTTTHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHH---hc--------c--CCc-EEEEccChHHHHHHHHHHHH
Confidence            6899999999999999998876 88887665443322211   11        1  122 67799999988888877665


Q ss_pred             hcCCccEEEEcccc
Q 039897          123 AYGKIDILVNNAAV  136 (272)
Q Consensus       123 ~~g~ld~vI~~ag~  136 (272)
                      .  ++++||-..|+
T Consensus        68 ~--g~~~VigTTG~   79 (245)
T 1p9l_A           68 N--GIHAVVGTTGF   79 (245)
T ss_dssp             T--TCEEEECCCCC
T ss_pred             c--CCCEEEcCCCC
Confidence            4  68888887765

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.89  E-value=0.13  Score=44.55  Aligned_cols=116  Identities=22%  Similarity=0.220  Sum_probs=72.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.|- |.||+++|+.|...|++|+..+++...    ..    ..+    .+  +..  +     ++++++
T Consensus       155 ~~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~----~~----~~~----~g--~~~--~-----~~l~el  212 (352)
T 3gg9_A          155 GRVLKGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENSK----ER----ARA----DG--FAV--A-----ESKDAL  212 (352)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHHH----HH----HHH----TT--CEE--C-----SSHHHH
T ss_pred             CccCCCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCCH----HH----HHh----cC--ceE--e-----CCHHHH
Confidence            46799999999985 899999999999999999998876311    10    111    11  111  1     234455


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.........+  +                   ....+..|+++..+|+++......    ...
T Consensus       213 l~-------~aDiV~l~~Plt~~t~~l--i-------------------~~~~l~~mk~gailIN~aRg~~vd----~~a  260 (352)
T 3gg9_A          213 FE-------QSDVLSVHLRLNDETRSI--I-------------------TVADLTRMKPTALFVNTSRAELVE----ENG  260 (352)
T ss_dssp             HH-------HCSEEEECCCCSTTTTTC--B-------------------CHHHHTTSCTTCEEEECSCGGGBC----TTH
T ss_pred             Hh-------hCCEEEEeccCcHHHHHh--h-------------------CHHHHhhCCCCcEEEECCCchhhc----HHH
Confidence            54       379998887653221111  1                   123567889889999999854333    334


Q ss_pred             HHHHHhhCCe
Q 039897          197 LALQLVERGI  206 (272)
Q Consensus       197 la~e~~~~gi  206 (272)
                      |...+...+|
T Consensus       261 L~~aL~~g~i  270 (352)
T 3gg9_A          261 MVTALNRGRP  270 (352)
T ss_dssp             HHHHHHHTSS
T ss_pred             HHHHHHhCCc
Confidence            4444444444

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.88  E-value=0.014  Score=49.45  Aligned_cols=38  Identities=26%  Similarity=0.295  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .++.+++++|.|+ |+||+++++.|...|++|++.+|+.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~  190 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSS  190 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            5689999999996 8999999999999999999999874

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.83  E-value=0.017  Score=48.66  Aligned_cols=38  Identities=32%  Similarity=0.325  Sum_probs=35.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .+++||+++|.|.++-+|+.+++.|.+.|++|.++.++
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            57999999999999999999999999999999999774

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.80  E-value=0.078  Score=45.20  Aligned_cols=116  Identities=12%  Similarity=0.102  Sum_probs=68.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..+|.|+|+ |.+|..++..|+..|.  +|++++++....+.   ...++.+.    ..  ....+.++. .+       
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g---~~~dl~~~----~~--~~~~~~i~~-~~-------   68 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIG---EAMDINHG----LP--FMGQMSLYA-GD-------   68 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCH---HHHHHTTS----CC--CTTCEEEC---C-------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHH---HHHHHHHh----HH--hcCCeEEEE-CC-------
Confidence            357999998 9999999999999987  89999998544332   22223221    00  000111211 00       


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                       .+.+..-|++|.++|.....    ..+..   +.+..|+.-...+.+.+..+ ..++.|++++-
T Consensus        69 -~~a~~~aDvVii~~g~p~k~----g~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN  124 (318)
T 1y6j_A           69 -YSDVKDCDVIVVTAGANRKP----GETRL---DLAKKNVMIAKEVTQNIMKY-YNHGVILVVSN  124 (318)
T ss_dssp             -GGGGTTCSEEEECCCC----------CHH---HHHHHHHHHHHHHHHHHHHH-CCSCEEEECSS
T ss_pred             -HHHhCCCCEEEEcCCCCCCC----CcCHH---HHHHhhHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence             12235799999999974321    12222   35777887777777777766 45667777644

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.80  E-value=0.061  Score=46.91  Aligned_cols=71  Identities=14%  Similarity=0.115  Sum_probs=51.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++.....               ..--.++..|..|.+.+.+++
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~---------------~~ad~~~~~~~~d~~~l~~~~   71 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR---------------YVAHEFIQAKYDDEKALNQLG   71 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG---------------GGSSEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh---------------hhCCEEEECCCCCHHHHHHHH
Confidence            4467899999985 578999999999999999999876432110               001135678888888877776


Q ss_pred             HHHHHhcCCccEEE
Q 039897          118 DEVVNAYGKIDILV  131 (272)
Q Consensus       118 ~~~~~~~g~ld~vI  131 (272)
                      +.       .|+++
T Consensus        72 ~~-------~dvi~   78 (377)
T 3orq_A           72 QK-------CDVIT   78 (377)
T ss_dssp             HH-------CSEEE
T ss_pred             Hh-------CCcce
Confidence            53       67663

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.79  E-value=0.016  Score=48.91  Aligned_cols=39  Identities=28%  Similarity=0.299  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .++.|++++|.| .|+||+++++.|...|++|++.+|+..
T Consensus       151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~  189 (293)
T 3d4o_A          151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESD  189 (293)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            468999999999 589999999999999999999988743

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.79  E-value=0.016  Score=48.49  Aligned_cols=38  Identities=26%  Similarity=0.245  Sum_probs=35.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .+++||+++|.|.++-+|+.+++.|..+|++|.++.++
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            57999999999999999999999999999999998664

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.78  E-value=0.16  Score=43.43  Aligned_cols=116  Identities=13%  Similarity=0.158  Sum_probs=74.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.| .|.||+++|+.|...|++|+..+|+.+..+.                . ...+.     ..+++++
T Consensus       132 ~~~l~gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----------------~-~~~~~-----~~~l~el  188 (324)
T 3evt_A          132 TSTLTGQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADH----------------F-HETVA-----FTATADA  188 (324)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTT----------------C-SEEEE-----GGGCHHH
T ss_pred             CccccCCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHh----------------H-hhccc-----cCCHHHH
Confidence            4579999999997 4799999999999999999999887543210                0 01111     2334455


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.........+  +                   ....+..|+++..+|++|......    ...
T Consensus       189 l~-------~aDvV~l~lPlt~~t~~l--i-------------------~~~~l~~mk~gailIN~aRG~~vd----~~a  236 (324)
T 3evt_A          189 LA-------TANFIVNALPLTPTTHHL--F-------------------STELFQQTKQQPMLINIGRGPAVD----TTA  236 (324)
T ss_dssp             HH-------HCSEEEECCCCCGGGTTC--B-------------------SHHHHHTCCSCCEEEECSCGGGBC----HHH
T ss_pred             Hh-------hCCEEEEcCCCchHHHHh--c-------------------CHHHHhcCCCCCEEEEcCCChhhh----HHH
Confidence            54       479998877653221111  1                   123457788888999998853322    566


Q ss_pred             HHHHHhhCCeE
Q 039897          197 LALQLVERGIR  207 (272)
Q Consensus       197 la~e~~~~gi~  207 (272)
                      |...+....|.
T Consensus       237 L~~aL~~g~i~  247 (324)
T 3evt_A          237 LMTALDHHQLS  247 (324)
T ss_dssp             HHHHHHTTSCS
T ss_pred             HHHHHHhCCce
Confidence            66666655554

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.78  E-value=0.068  Score=42.52  Aligned_cols=77  Identities=14%  Similarity=0.242  Sum_probs=50.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      -++..+++.|.| .|.+|.+++..|++.|++|++.+|+++             .   -...++.++.+-   ...+.+++
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------------~---~~~aD~vi~av~---~~~~~~v~   74 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------A---TTLGEIVIMAVP---YPALAALA   74 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------------C---SSCCSEEEECSC---HHHHHHHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------------H---hccCCEEEEcCC---cHHHHHHH
Confidence            347778999999 799999999999999999999988744             0   023444444432   56677788


Q ss_pred             HHHHHhcCCccEEEEccc
Q 039897          118 DEVVNAYGKIDILVNNAA  135 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag  135 (272)
                      +++..... =.++|++..
T Consensus        75 ~~l~~~~~-~~~vi~~~~   91 (209)
T 2raf_A           75 KQYATQLK-GKIVVDITN   91 (209)
T ss_dssp             HHTHHHHT-TSEEEECCC
T ss_pred             HHHHHhcC-CCEEEEECC
Confidence            77765444 235665544

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.76  E-value=0.14  Score=39.32  Aligned_cols=144  Identities=13%  Similarity=-0.020  Sum_probs=75.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+++||=.|++.|.   ++..|++.+.+|+.++.++...+..++.+...      .-.++.++..|..+..   ...   
T Consensus        22 ~~~~vLDiGcG~G~---~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~------~~~~v~~~~~~~~~l~---~~~---   86 (185)
T 3mti_A           22 DESIVVDATMGNGN---DTAFLAGLSKKVYAFDVQEQALGKTSQRLSDL------GIENTELILDGHENLD---HYV---   86 (185)
T ss_dssp             TTCEEEESCCTTSH---HHHHHHTTSSEEEEEESCHHHHHHHHHHHHHH------TCCCEEEEESCGGGGG---GTC---
T ss_pred             CCCEEEEEcCCCCH---HHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEeCcHHHHH---hhc---
Confidence            47789998966652   33445556899999999855544444433321      1256777775553321   111   


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---HHHH
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---ARGL  197 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---~~~l  197 (272)
                         .+.+|+++.+.+.......           .+.........+++.+...|+++|.++.+.-.....+...   ...+
T Consensus        87 ---~~~fD~v~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~  152 (185)
T 3mti_A           87 ---REPIRAAIFNLGYLPSADK-----------SVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEY  152 (185)
T ss_dssp             ---CSCEEEEEEEEC----------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHH
T ss_pred             ---cCCcCEEEEeCCCCCCcch-----------hcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence               2469999888665321100           0111112234456777788898998877643322222222   3445


Q ss_pred             HHHHhhCCeEEEEEec
Q 039897          198 ALQLVERGIRVNGVAP  213 (272)
Q Consensus       198 a~e~~~~gi~vn~i~P  213 (272)
                      ..++...+.++..+.+
T Consensus       153 ~~~l~~~~~~~~~~~~  168 (185)
T 3mti_A          153 VIGLDQRVFTAMLYQP  168 (185)
T ss_dssp             HHHSCTTTEEEEEEEE
T ss_pred             HHhCCCceEEEEEehh
Confidence            5555556677666553

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.75  E-value=0.0059  Score=54.05  Aligned_cols=36  Identities=31%  Similarity=0.294  Sum_probs=32.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEE-EEec
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVA-FTYV   74 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~-i~~r   74 (272)
                      .+++||+|+|+| .|.+|..+++.|.+.|++|+ +.+.
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            468999999998 89999999999999999999 6555

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=95.74  E-value=0.11  Score=44.84  Aligned_cols=113  Identities=22%  Similarity=0.199  Sum_probs=73.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.|- |.||+.+|+.|...|++|+..+++....                ....+.+     .   +++++
T Consensus       143 ~~~l~gktvgIiGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~----------------~~~~~~~-----~---~l~el  197 (343)
T 2yq5_A          143 SNEIYNLTVGLIGV-GHIGSAVAEIFSAMGAKVIAYDVAYNPE----------------FEPFLTY-----T---DFDTV  197 (343)
T ss_dssp             BCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCGG----------------GTTTCEE-----C---CHHHH
T ss_pred             ccccCCCeEEEEec-CHHHHHHHHHHhhCCCEEEEECCChhhh----------------hhccccc-----c---CHHHH
Confidence            45799999999985 8999999999999999999999875431                0111111     1   34455


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.........+  ++                   ...+..|+++..+|+++......    .+.
T Consensus       198 l~-------~aDvV~l~~Plt~~t~~l--i~-------------------~~~l~~mk~gailIN~aRg~~vd----~~a  245 (343)
T 2yq5_A          198 LK-------EADIVSLHTPLFPSTENM--IG-------------------EKQLKEMKKSAYLINCARGELVD----TGA  245 (343)
T ss_dssp             HH-------HCSEEEECCCCCTTTTTC--BC-------------------HHHHHHSCTTCEEEECSCGGGBC----HHH
T ss_pred             Hh-------cCCEEEEcCCCCHHHHHH--hh-------------------HHHHhhCCCCcEEEECCCChhhh----HHH
Confidence            54       479998888763221111  11                   23456788888999998864332    455


Q ss_pred             HHHHHhhCCe
Q 039897          197 LALQLVERGI  206 (272)
Q Consensus       197 la~e~~~~gi  206 (272)
                      |...+....|
T Consensus       246 L~~aL~~g~i  255 (343)
T 2yq5_A          246 LIKALQDGEI  255 (343)
T ss_dssp             HHHHHHHTSS
T ss_pred             HHHHHHcCCC
Confidence            6655555444

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.72  E-value=0.028  Score=50.13  Aligned_cols=36  Identities=25%  Similarity=0.331  Sum_probs=31.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      .+++.+|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        37 ~L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D   73 (434)
T 1tt5_B           37 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   73 (434)
T ss_dssp             HHHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             HhcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            458899999996 8899999999999998 68888643

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.68  E-value=0.41  Score=40.21  Aligned_cols=117  Identities=15%  Similarity=0.074  Sum_probs=70.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+|+ |+||..++..|..++.  ++++.+.+...   .+-..-++.+..............  .+.+          
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~---~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----------   65 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL---AVGEAMDLAHAAAGIDKYPKIVGG--ADYS----------   65 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH---HHHHHHHHHHHHGGGTCCCEEEEE--SCGG----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCc---chhhhhhhhcccccCCCCCeEecC--CCHH----------
Confidence            5888995 9999999999998875  69999987432   233333333322111222232222  1222          


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                       ....-|++|..||.....    ..+.++   .++.|..=.-.+.+.+..+ ..++.++.+|-.
T Consensus        66 -~~~~aDvVvitAG~prkp----GmtR~d---Ll~~Na~I~~~i~~~i~~~-~p~aivlvvsNP  120 (294)
T 2x0j_A           66 -LLKGSEIIVVTAGLARKP----GMTRLD---LAHKNAGIIKDIAKKIVEN-APESKILVVTNP  120 (294)
T ss_dssp             -GGTTCSEEEECCCCCCCS----SSCHHH---HHHHHHHHHHHHHHHHHTT-STTCEEEECSSS
T ss_pred             -HhCCCCEEEEecCCCCCC----CCchHH---HHHHHHHHHHHHHHHHHhc-CCceEEEEecCc
Confidence             124789999999985432    245544   4677877666677666554 234666666654

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.68  E-value=0.47  Score=40.26  Aligned_cols=117  Identities=14%  Similarity=0.086  Sum_probs=64.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .++|.|+|+ |.+|..++..|+..|.  +|++.+++..   .++.....+.+........+.... |  +.         
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~---~~~~~~~dl~~~~~~~~~~~~i~~-~--~~---------   69 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANES---KAIGDAMDFNHGKVFAPKPVDIWH-G--DY---------   69 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH---HHHHHHHHHHHHTTSSSSCCEEEE-C--CG---------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcc---hHHHHHhhHHHHhhhcCCCeEEEc-C--cH---------
Confidence            368999998 9999999999998885  7999999743   233223333332111111233222 1  11         


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                        +.+..-|+||.++|.....+.    +..   ..+..|..-...+.+.+..+. .++.+++++-
T Consensus        70 --~al~~aDvViia~~~~~~~g~----~r~---dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tN  124 (316)
T 1ldn_A           70 --DDCRDADLVVICAGANQKPGE----TRL---DLVDKNIAIFRSIVESVMASG-FQGLFLVATN  124 (316)
T ss_dssp             --GGTTTCSEEEECCSCCCCTTT----CSG---GGHHHHHHHHHHHHHHHHHHT-CCSEEEECSS
T ss_pred             --HHhCCCCEEEEcCCCCCCCCC----CHH---HHHHcChHHHHHHHHHHHHHC-CCCEEEEeCC
Confidence              123478999999998543221    111   123444443444444444432 3455555543

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=95.66  E-value=0.12  Score=43.95  Aligned_cols=105  Identities=18%  Similarity=0.226  Sum_probs=68.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++.|+++.|.| .|.||..+++.|...|++|++.+++....                   .     .+.   .++.+++
T Consensus       140 ~~l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-------------------~-----~~~---~~l~ell  191 (311)
T 2cuk_A          140 LDLQGLTLGLVG-MGRIGQAVAKRALAFGMRVVYHARTPKPL-------------------P-----YPF---LSLEELL  191 (311)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSS-------------------S-----SCB---CCHHHHH
T ss_pred             cCCCCCEEEEEE-ECHHHHHHHHHHHHCCCEEEEECCCCccc-------------------c-----ccc---CCHHHHH
Confidence            468999999997 59999999999999999999988864321                   0     122   2344444


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHH
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGL  197 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~l  197 (272)
                      .       .-|+|+.+.........+  ++                   +..+..|+++..+|++++.... .   ...+
T Consensus       192 ~-------~aDvV~l~~p~~~~t~~l--i~-------------------~~~l~~mk~ga~lin~srg~~v-d---~~aL  239 (311)
T 2cuk_A          192 K-------EADVVSLHTPLTPETHRL--LN-------------------RERLFAMKRGAILLNTARGALV-D---TEAL  239 (311)
T ss_dssp             H-------HCSEEEECCCCCTTTTTC--BC-------------------HHHHTTSCTTCEEEECSCGGGB-C---HHHH
T ss_pred             h-------hCCEEEEeCCCChHHHhh--cC-------------------HHHHhhCCCCcEEEECCCCCcc-C---HHHH
Confidence            4       379998887653211111  11                   1234677888889999984221 1   4556


Q ss_pred             HHHHh
Q 039897          198 ALQLV  202 (272)
Q Consensus       198 a~e~~  202 (272)
                      ...+.
T Consensus       240 ~~aL~  244 (311)
T 2cuk_A          240 VEALR  244 (311)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            55555

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=95.64  E-value=0.088  Score=44.56  Aligned_cols=109  Identities=21%  Similarity=0.232  Sum_probs=69.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++.|+++.|.| .|.||+++|+.|...|++|+..+++.. .                .  .       .....++++++ 
T Consensus       121 ~l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~dr~~~-~----------------~--~-------~~~~~~l~ell-  172 (303)
T 1qp8_A          121 LIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK-E----------------G--P-------WRFTNSLEEAL-  172 (303)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC-C----------------S--S-------SCCBSCSHHHH-
T ss_pred             CCCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcc-c----------------c--C-------cccCCCHHHHH-
Confidence            69999999997 599999999999999999999888643 1                1  0       00111233344 


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHH
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLA  198 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la  198 (272)
                            ..-|+|+.+.........+  +                   ....+..|+++..+|++|+....    ....|.
T Consensus       173 ------~~aDvV~l~~P~~~~t~~~--i-------------------~~~~l~~mk~gailin~srg~~v----d~~aL~  221 (303)
T 1qp8_A          173 ------REARAAVCALPLNKHTRGL--V-------------------KYQHLALMAEDAVFVNVGRAEVL----DRDGVL  221 (303)
T ss_dssp             ------TTCSEEEECCCCSTTTTTC--B-------------------CHHHHTTSCTTCEEEECSCGGGB----CHHHHH
T ss_pred             ------hhCCEEEEeCcCchHHHHH--h-------------------CHHHHhhCCCCCEEEECCCCccc----CHHHHH
Confidence                  3589998887653221111  1                   12355778888889999984221    145555


Q ss_pred             HHHhhCCe
Q 039897          199 LQLVERGI  206 (272)
Q Consensus       199 ~e~~~~gi  206 (272)
                      ..+....|
T Consensus       222 ~aL~~g~i  229 (303)
T 1qp8_A          222 RILKERPQ  229 (303)
T ss_dssp             HHHHHCTT
T ss_pred             HHHHhCCc
Confidence            55555444

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.62  E-value=0.084  Score=44.67  Aligned_cols=114  Identities=15%  Similarity=0.147  Sum_probs=63.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+|+ |.+|..++..|+..|.  +|++.+++..   .++....++.+... ........ .  .+.           
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~---~~~~~~~~l~~~~~-~~~~~~i~-~--~~~-----------   62 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDED---RAQAEAEDIAHAAP-VSHGTRVW-H--GGH-----------   62 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHH---HHHHHHHHHTTSCC-TTSCCEEE-E--ECG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHH---HHHHHHHhhhhhhh-hcCCeEEE-E--CCH-----------
Confidence            6889998 9999999999999998  9999999743   23222222221100 00111111 1  111           


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                      +....-|+||.+++.....+    .+.   .+.+..|+.-...+.+.+.++ ..++.+++++-
T Consensus        63 ~a~~~aDvVIi~~~~~~~~g----~~r---~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tN  117 (304)
T 2v6b_A           63 SELADAQVVILTAGANQKPG----ESR---LDLLEKNADIFRELVPQITRA-APDAVLLVTSN  117 (304)
T ss_dssp             GGGTTCSEEEECC-------------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSS
T ss_pred             HHhCCCCEEEEcCCCCCCCC----CcH---HHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecC
Confidence            12347899999998743211    111   234566776666777776665 34566666543

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.62  E-value=0.51  Score=41.05  Aligned_cols=124  Identities=10%  Similarity=0.064  Sum_probs=74.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-----eEEEEecccc-hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-----TVAFTYVKSQ-EEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-----~v~i~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +..+|.|+||+|.||.+++..|+..+.     .+++.+.+.. ..+.+.-..-++.+..    . .......+.+.    
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~----~-p~~~~v~i~~~----  101 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL----Y-PLLREVSIGID----  101 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT----C-TTEEEEEEESC----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhh----h-hhcCCcEEecC----
Confidence            357899999999999999999998765     2777655432 2333444444454321    0 11111222211    


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                           -.+.+..-|++|..||.....    ..+.   .+.++.|+.-.-.+.+.+..+...++.|+.+|..
T Consensus       102 -----~y~~~~daDvVVitag~prkp----G~tR---~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP  160 (375)
T 7mdh_A          102 -----PYEVFEDVDWALLIGAKPRGP----GMER---AALLDINGQIFADQGKALNAVASKNVKVLVVGNP  160 (375)
T ss_dssp             -----HHHHTTTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             -----CHHHhCCCCEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence                 122345799999999974322    2333   3456777766666666666554456777777754

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.61  E-value=0.012  Score=49.15  Aligned_cols=37  Identities=32%  Similarity=0.373  Sum_probs=33.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ++.+++++|.|+ |++|++++..|.+.|++|.+++|+.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~  162 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTK  162 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCH
Confidence            578899999996 7999999999999999999998874

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.61  E-value=0.097  Score=45.15  Aligned_cols=118  Identities=15%  Similarity=0.181  Sum_probs=76.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.| .|.||+++|+.|...|++|+..+++....+..             .  .+.+  +     ++++++
T Consensus       168 g~~l~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-------------~--g~~~--~-----~~l~el  224 (345)
T 4g2n_A          168 GMGLTGRRLGIFG-MGRIGRAIATRARGFGLAIHYHNRTRLSHALE-------------E--GAIY--H-----DTLDSL  224 (345)
T ss_dssp             BCCCTTCEEEEES-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-------------T--TCEE--C-----SSHHHH
T ss_pred             ccccCCCEEEEEE-eChhHHHHHHHHHHCCCEEEEECCCCcchhhh-------------c--CCeE--e-----CCHHHH
Confidence            4579999999998 58999999999999999999998875332110             1  1111  1     234455


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.........+  +                   .+..+..|+++..+|+++......    ...
T Consensus       225 l~-------~sDvV~l~~Plt~~T~~l--i-------------------~~~~l~~mk~gailIN~aRG~~vd----e~a  272 (345)
T 4g2n_A          225 LG-------ASDIFLIAAPGRPELKGF--L-------------------DHDRIAKIPEGAVVINISRGDLIN----DDA  272 (345)
T ss_dssp             HH-------TCSEEEECSCCCGGGTTC--B-------------------CHHHHHHSCTTEEEEECSCGGGBC----HHH
T ss_pred             Hh-------hCCEEEEecCCCHHHHHH--h-------------------CHHHHhhCCCCcEEEECCCCchhC----HHH
Confidence            54       579998887653221111  1                   123457788888899998753322    566


Q ss_pred             HHHHHhhCCeEEE
Q 039897          197 LALQLVERGIRVN  209 (272)
Q Consensus       197 la~e~~~~gi~vn  209 (272)
                      |...+....|.--
T Consensus       273 L~~aL~~g~i~gA  285 (345)
T 4g2n_A          273 LIEALRSKHLFAA  285 (345)
T ss_dssp             HHHHHHHTSEEEE
T ss_pred             HHHHHHhCCceEE
Confidence            6666666555533

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.61  E-value=0.021  Score=47.84  Aligned_cols=41  Identities=24%  Similarity=0.259  Sum_probs=37.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .+++||+++|.|++.-+|+.+++.|...|++|.++.++..+
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~  195 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN  195 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            57999999999999999999999999999999999876443

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.59  E-value=0.027  Score=50.53  Aligned_cols=39  Identities=31%  Similarity=0.248  Sum_probs=35.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..++++|+|+|.|. |+.|.++|+.|.++|++|.+.+++.
T Consensus         4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            35688999999999 7889999999999999999999865

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.58  E-value=0.041  Score=44.45  Aligned_cols=38  Identities=26%  Similarity=0.405  Sum_probs=34.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      ..+++||.|||.|| |.+|...++.|++.|++|++++.+
T Consensus        26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~   63 (223)
T 3dfz_A           26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPT   63 (223)
T ss_dssp             EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSS
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCC
Confidence            46799999999997 589999999999999999999765

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.58  E-value=0.18  Score=42.78  Aligned_cols=116  Identities=16%  Similarity=0.121  Sum_probs=61.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ++|.|+|+ |.+|..++..|+..|. +|++++++.+..+   ....++.+..............  ++.+          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~---g~~~dl~~~~~~~~~~~~i~~t--~d~~----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQ---GKALDLYEASPIEGFDVRVTGT--NNYA----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHH---HHHHHHHTTHHHHTCCCCEEEE--SCGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHH---HHHHhHHHhHhhcCCCeEEEEC--CCHH----------
Confidence            57999998 9999999999999996 8999998754433   2222332211000111111110  1111          


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEec
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT  183 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vs  183 (272)
                       .+..-|+||.++|.....+    .+.   ...+..|..-...+.+.+..+- .++.+++++
T Consensus        67 -a~~~aD~Vi~a~g~p~~~g----~~r---~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t  119 (309)
T 1ur5_A           67 -DTANSDVIVVTSGAPRKPG----MSR---EDLIKVNADITRACISQAAPLS-PNAVIIMVN  119 (309)
T ss_dssp             -GGTTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC
T ss_pred             -HHCCCCEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC
Confidence             1246899999999843221    111   1234555555555555554442 344455543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.57  E-value=0.039  Score=46.99  Aligned_cols=38  Identities=16%  Similarity=0.152  Sum_probs=32.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccch
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQE   78 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~   78 (272)
                      +..++|.|+| .|.+|..+++.|.+.|+  +|++.+++++.
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~   70 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPES   70 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHH
Confidence            4457899998 79999999999999999  99999987543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.54  E-value=0.066  Score=46.48  Aligned_cols=93  Identities=6%  Similarity=0.049  Sum_probs=53.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHH----HHHHHHhhhc-CCCCceEEeccCCChHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQET----LEILREAKTS-DAKDPMAISADLGFDENCK  114 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~  114 (272)
                      +++++|.|+| .|.+|..+++.|++.|++|++.+|++...+.+.+.    ...+.+.... ...++.++.  +.+. .++
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~--vp~~-~v~   95 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLM--VPAA-VVD   95 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEEC--SCGG-GHH
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEe--CCHH-HHH
Confidence            4567899997 68999999999999999999999985543332210    0001111110 111333332  2333 566


Q ss_pred             HHHHHHHHhcCCccEEEEcccc
Q 039897          115 RVVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      .+++.+......=++||.+...
T Consensus        96 ~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           96 SMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHhhCCCCCEEEeCCCC
Confidence            6676665544444566665544

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=95.53  E-value=0.14  Score=40.31  Aligned_cols=125  Identities=12%  Similarity=0.110  Sum_probs=72.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.+.+||-.|++.|.   ++..|++.+.+|+.++.++...+..++.+...   +  ...++.++..|+.+.-        
T Consensus        54 ~~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~---g--~~~~v~~~~~d~~~~~--------  117 (204)
T 3njr_A           54 RRGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTY---G--LSPRMRAVQGTAPAAL--------  117 (204)
T ss_dssp             CTTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---T--CTTTEEEEESCTTGGG--------
T ss_pred             CCCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc---C--CCCCEEEEeCchhhhc--------
Confidence            357899999977652   33445555899999999855444433332221   1  1236888899886521        


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHHH
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLAL  199 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la~  199 (272)
                        ...+.+|+++.+.+.          +              .. +++.+...|+.+|++++.....     .....+..
T Consensus       118 --~~~~~~D~v~~~~~~----------~--------------~~-~l~~~~~~LkpgG~lv~~~~~~-----~~~~~~~~  165 (204)
T 3njr_A          118 --ADLPLPEAVFIGGGG----------S--------------QA-LYDRLWEWLAPGTRIVANAVTL-----ESETLLTQ  165 (204)
T ss_dssp             --TTSCCCSEEEECSCC----------C--------------HH-HHHHHHHHSCTTCEEEEEECSH-----HHHHHHHH
T ss_pred             --ccCCCCCEEEECCcc----------c--------------HH-HHHHHHHhcCCCcEEEEEecCc-----ccHHHHHH
Confidence              122468999866532          0              12 4566677788899988765431     22333344


Q ss_pred             HHhhCCeEEEEEe
Q 039897          200 QLVERGIRVNGVA  212 (272)
Q Consensus       200 e~~~~gi~vn~i~  212 (272)
                      .+.+.|..+..+.
T Consensus       166 ~l~~~g~~i~~i~  178 (204)
T 3njr_A          166 LHARHGGQLLRID  178 (204)
T ss_dssp             HHHHHCSEEEEEE
T ss_pred             HHHhCCCcEEEEE
Confidence            4444455554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	272
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	8e-62
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-61
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-61
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-60
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-59
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-58
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	8e-57
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-56
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-56
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-55
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-53
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-53
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-53
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-53
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-52
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-52
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-51
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-51
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	8e-51
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-50
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-50
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-50
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	9e-50
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	9e-50
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	5e-49
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-49
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	7e-49
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	7e-49
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-49
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-48
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-48
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-47
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-46
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	9e-46
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-45
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-44
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	6e-44
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-43
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-43
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-43
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-43
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-42
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	6e-42
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-41
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-41
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-40
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-40
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-40
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	5e-38
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-37
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	9e-37
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-36
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-35
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-32
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-30
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-30
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-30
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-29
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-29
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-28
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-26
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-06
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	6e-23
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	9e-23
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	9e-21
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	9e-20
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-12
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	3e-12
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	5e-12
d1edza1	171	c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehy	0.003

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  194 bits (493), Expect = 8e-62
 Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 31/259 (11%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +   KVA++TG  +GIGRA A  +A EGA V  T       +  +ET + +  A  S  +
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH---AERLEETRQQILAAGVS-EQ 57

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY---KAGSVEEIDEERLERVF 155
           +  ++ AD+  D     ++   +  +GK+DILVNNA       ++ +      E  +   
Sbjct: 58  NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATL 117

Query: 156 RTNIFSHFFMTRHSLRH--MNEGSAIINTTSVEPLWHSPE--------------ARGLAL 199
             N+ S   +T+ ++ H    +G  +  ++    L  +P+               R  A+
Sbjct: 118 NLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAI 177

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEES--------AQFGSEVPMKRAGQPIEVAPC 251
            L++ GIRVN ++PG + T    +    EE+        A     VP    GQP ++A  
Sbjct: 178 DLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEV 237

Query: 252 YVFLACNHCSSYITGQVLH 270
             FLA    SSYI G  L 
Sbjct: 238 IAFLADRKTSSYIIGHQLV 256

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  192 bits (489), Expect = 2e-61
 Identities = 80/253 (31%), Positives = 114/253 (45%), Gaps = 36/253 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
              GK  LVTGG  GIGRA+A  +A EGA VA   ++     + +E  E +  A      
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR----PEGKEVAEAIGGA------ 51

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                  DL  +    R V+E   A G++D+LVNNAA+    GS   +      RV   N
Sbjct: 52  ---FFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVN 107

Query: 159 IFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           + +   ++  + R M +    AI+N  SV+ L+   E               R LAL L 
Sbjct: 108 LTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA 167

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
              IRVN VAPG I T  +  + +     E     +     ++R G+P EVA   +FLA 
Sbjct: 168 PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS 227

Query: 258 NHCSSYITGQVLH 270
              +S+ITG +L 
Sbjct: 228 EK-ASFITGAILP 239

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  191 bits (487), Expect = 3e-61
 Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 28/249 (11%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+ K+A++TGG +GIGRA+A  +A+EGA +A   +    E +A         A  +  +
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---------AIRNLGR 52

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             + +  D+    + +    +V++ +G+ DILVNNA +       +E+  E+ ++ F  N
Sbjct: 53  RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEIN 111

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           + S F M +  +  M  N    IIN TS                        R LA  L 
Sbjct: 112 VDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG 171

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV-PMKRAGQPIEVAPCYVFLACNHCS 261
           + GI VN +AP  + T    +S          + +  + R   P+++     FLA +  +
Sbjct: 172 KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD-A 230

Query: 262 SYITGQVLH 270
           S+ITGQ L 
Sbjct: 231 SFITGQTLA 239

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  188 bits (478), Expect = 7e-60
 Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 29/253 (11%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           SN+L GKVA++TGG  GIG A+A  +  EGA V  T   S   + A +++    + +   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQ--- 57

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
                    D   ++   ++ D    A+G +  LVNNA +     SVEE       ++  
Sbjct: 58  -----FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEWRKLLA 111

Query: 157 TNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------------ARGLAL 199
            N+   FF TR  ++ M     G++IIN +S+E     P               ++  AL
Sbjct: 112 VNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAAL 171

Query: 200 --QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
              L +  +RVN V PG I TPL+      EE+    ++ PM   G+P ++A   V+LA 
Sbjct: 172 DCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231

Query: 258 NHCSSYITGQVLH 270
           N  S + TG    
Sbjct: 232 NE-SKFATGSEFV 243

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  187 bits (477), Expect = 2e-59
 Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 31/259 (11%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +   K  ++TG  +GIGR  A  +A EGA V  T       +  +ET +I+ ++  S+ +
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS---SERLEETRQIILKSGVSEKQ 58

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG---SVEEIDEERLERVF 155
              ++ AD+  ++   ++++  +  +GKID+LVNNA          +  +   +   +  
Sbjct: 59  -VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTL 117

Query: 156 RTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLAL 199
           + N+ +   MT+    H+    G  +  ++ V      P+               R  A+
Sbjct: 118 KLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAI 177

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ--------FGSEVPMKRAGQPIEVAPC 251
            L + GIRVN V+PG + T    +    ++++Q            +P+  AG+P  +A  
Sbjct: 178 DLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANI 237

Query: 252 YVFLACNHCSSYITGQVLH 270
            +FLA  + S YI GQ + 
Sbjct: 238 ILFLADRNLSFYILGQSIV 256

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (468), Expect = 3e-58
 Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 33/253 (13%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +  GKV +VTGG  GIG  +   +   GA V         E   +   + L  A     
Sbjct: 2   TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD---ESGGRALEQELPGAV---- 54

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                I  D+  +++ K +V E +  +G++D +VNNA         EE   +   ++   
Sbjct: 55  ----FILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLEL 110

Query: 158 NIFSHFFMTRHSLRHMNEGS-AIINTTSVEPLWHSPE--------------ARGLALQLV 202
           N+   + +T+ +L ++ +    +IN +S+       +               + LAL   
Sbjct: 111 NLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES 170

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFS-----EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
             G+RVN ++PG IWTPL     +          +     P+ R GQP EV    VFLA 
Sbjct: 171 PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS 230

Query: 258 NHCSSYITGQVLH 270
              +++ TG  L 
Sbjct: 231 E--ANFCTGIELL 241

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (459), Expect = 8e-57
 Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 31/258 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            + R ++ALVTG   GIG AVA     +G  V           + +E     + A     
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART---VGNIEELAAECKSAGYPG- 61

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              +    DL  +E+   +   + + +  +DI +NNA +     ++        + +F  
Sbjct: 62  -TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNV 119

Query: 158 NIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLWHSPEA----------------RGL 197
           N+ +    TR + + M E       IIN  S+      P +                 GL
Sbjct: 120 NVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGL 179

Query: 198 ALQLVE--RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
             +L E    IR   ++PG + T        +++  +  +     +  +P +VA   +++
Sbjct: 180 RQELREAQTHIRATCISPGVVETQFA-FKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYV 238

Query: 256 ACNHCSSYITGQV-LHPN 272
                +    G + + P 
Sbjct: 239 LSTP-AHIQIGDIQMRPT 255

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  179 bits (455), Expect = 3e-56
 Identities = 61/248 (24%), Positives = 94/248 (37%), Gaps = 26/248 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+ K  LVTGG  GIG A+   +A  GA +         E +  E L   ++        
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN---EYELNECLSKWQKK----GFQ 58

Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                 D       ++++  V + + GK+DIL+NN      +    +   E       TN
Sbjct: 59  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTN 117

Query: 159 IFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------------ARGLALQLV 202
           + S + +++ +   +                                    AR LA +  
Sbjct: 118 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 177

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
             GIR N VAP  I TPL  + + +E      S  P+ R G+P EV+    FL     +S
Sbjct: 178 SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA-AS 236

Query: 263 YITGQVLH 270
           YITGQ + 
Sbjct: 237 YITGQTIC 244

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  179 bits (454), Expect = 6e-56
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 29/257 (11%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +  GK  ++TG  +GIGR+ A  +A EGA V  T      E   +ET + + +A    A+
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN---EDRLEETKQQILKAG-VPAE 56

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAG-SVEEIDEERLERVFRT 157
              A+ AD+        +++  +  +GKIDILVNNA      G +  +   E  ++ F+ 
Sbjct: 57  KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL 116

Query: 158 NIFSHFFMTRHSLRHMNEGSAII--NTTSVEPLWHSPE--------------ARGLALQL 201
           N  +   MT+ +  H+ +    I   ++ V                       R  A+ L
Sbjct: 117 NFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDL 176

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEES--------AQFGSEVPMKRAGQPIEVAPCYV 253
           ++ G+RVN V+PG + T  + +    E +              +P+   G+P E+A   V
Sbjct: 177 IQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV 236

Query: 254 FLACNHCSSYITGQVLH 270
           FLA  + SSYI GQ + 
Sbjct: 237 FLADRNLSSYIIGQSIV 253

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  175 bits (445), Expect = 7e-55
 Identities = 78/254 (30%), Positives = 113/254 (44%), Gaps = 33/254 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           N+L+GKVALVTGG SG+G  V      EGA VAF+ +    E   Q+    L E      
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAELGE------ 52

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
              M +  D+  + +   V+  V    G +++LVNNA +    G +E    E   R+ + 
Sbjct: 53  -RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKI 110

Query: 158 NIFSHFFMTRHSLRHMNE-GSAIINTTSV---------EPLWHSPEA-----RGLALQLV 202
           N  S F   +  +  M E G +IIN  SV              S  A     R  AL   
Sbjct: 111 NTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR 170

Query: 203 ERG--IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV----PMKRAGQPIEVAPCYVFLA 256
           ++G  IRVN + P  I+TP++ +S  +  S +            RA  P  +A   +FLA
Sbjct: 171 KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230

Query: 257 CNHCSSYITGQVLH 270
            +  SS ++G  LH
Sbjct: 231 SDE-SSVMSGSELH 243

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  172 bits (436), Expect = 1e-53
 Identities = 43/249 (17%), Positives = 78/249 (31%), Gaps = 37/249 (14%)

Query: 45  ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS 104
           A+VT      G   A   +  G TVA      +++ + +   E                 
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------------YPQ 49

Query: 105 ADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFF 164
                ++    +++ V +AYG++D+LV+N     +   +++   E             F 
Sbjct: 50  LKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFA 109

Query: 165 MTRHSLRHMNEGSAIINTTSVEPLWHSPE----------------ARGLALQLVERGIRV 208
           +       M +  +             P                 A  L+ +L E  I V
Sbjct: 110 LVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPV 169

Query: 209 NGVAPGPIWTPLIPSSF-------SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             + P  + +   P  +       + E  A       ++R G   E+     FLA     
Sbjct: 170 FAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS-C 228

Query: 262 SYITGQVLH 270
            Y+TGQV  
Sbjct: 229 DYLTGQVFW 237

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  171 bits (435), Expect = 2e-53
 Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 26/249 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           LRG+VALVTGG  G+G  +A   A  G +V          ++A E  + L E    +   
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN---LEEASEAAQKLTEKYGVET-- 57

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            MA   D+   E  K++++ V   +GK+D +VN A +  +    EE   +   +V   N+
Sbjct: 58  -MAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNL 115

Query: 160 FSHFFMTRHSLRH--------MNEGSAIINTTSVEPLWHSPEA---------RGLALQLV 202
           F  +++ R +           +    ++       P   +  A         + LA +  
Sbjct: 116 FGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 175

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
             GIRVN +APG   T +  + FS+ E        +P+ R G P ++    VFLA    +
Sbjct: 176 RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEE-A 234

Query: 262 SYITGQVLH 270
            Y+TGQ++ 
Sbjct: 235 KYVTGQIIF 243

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  171 bits (435), Expect = 3e-53
 Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 30/252 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G  ALVTGG  GIG  +    A  GA+V       +E  D             S    
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR-------SKGFK 58

Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             A   DL      + +++ V N + GK++ILVNNA +       ++   E    +   N
Sbjct: 59  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSIN 117

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
             + + ++  +   +  +E   ++  +SV      P                R LA +  
Sbjct: 118 FEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA 177

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEES----AQFGSEVPMKRAGQPIEVAPCYVFLACN 258
           +  IRVNGV PG I T L+  +  + E      +      ++R G+P E+A    FL   
Sbjct: 178 KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFP 237

Query: 259 HCSSYITGQVLH 270
             +SY+TGQ+++
Sbjct: 238 A-ASYVTGQIIY 248

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  171 bits (435), Expect = 3e-53
 Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 26/248 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GK A++TG  +GIG+ +A  +A  GA+V  + +       A   ++ +++       
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN---ADAANHVVDEIQQLG----G 60

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              A   D+  ++    + D  ++  GK+DILVNNA          ++      R +  N
Sbjct: 61  QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG--PKPFDMPMADFRRAYELN 118

Query: 159 IFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------------ARGLALQLV 202
           +FS F +++     M +    +  T       +                   R +A  L 
Sbjct: 119 VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG 178

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           E+ IRVNG+APG I T  + S  + E   +     P++R GQP ++A   +FL     +S
Sbjct: 179 EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA-AS 237

Query: 263 YITGQVLH 270
           +++GQ+L 
Sbjct: 238 WVSGQILT 245

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (433), Expect = 1e-52
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 22/256 (8%)

Query: 33  DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
            Y     L+G+VA+VTGG +GIG+A+       G+ V     K +  K A +  E+    
Sbjct: 3   SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD--ELQANL 60

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
             +     + I  ++  +E    +V   ++ +GKI+ LVNN   Q+     E I  +   
Sbjct: 61  PPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWH 119

Query: 153 RVFRTNIFSHFFMTRHSLRHM---NEGSAIINTTSVE---PLWHSPEA---------RGL 197
            V  TN+   F+M +         + GS +      +   PL     A         + L
Sbjct: 120 AVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSL 179

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSF---SEEESAQFGSEVPMKRAGQPIEVAPCYVF 254
           AL+    GIR+N VAPG I++     ++    +        ++P KR G P EV+    F
Sbjct: 180 ALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCF 239

Query: 255 LACNHCSSYITGQVLH 270
           L     +S+ITGQ + 
Sbjct: 240 LLSPA-ASFITGQSVD 254

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  169 bits (428), Expect = 2e-52
 Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 30/247 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L+ K  L+TG   GIGRA    +A EGA +    ++    ++A E +            
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH--------- 52

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               +  D+    + +R   E +   G++D +V+ A +        ++  E  E V R N
Sbjct: 53  ---PVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRD-NFHWKMPLEDWELVLRVN 108

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPEA-------------RGLALQLVE 203
           +   F + + +   M      +I+ T S   L +  +A             R LAL+L  
Sbjct: 109 LTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGR 168

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
            GIRVN +APG I T +  +   E+   +  +  P+ RAG+P+EVA   +FL  +  SS+
Sbjct: 169 WGIRVNTLAPGFIETRMT-AKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE-SSF 226

Query: 264 ITGQVLH 270
           ITGQVL 
Sbjct: 227 ITGQVLF 233

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  166 bits (422), Expect = 3e-51
 Identities = 61/255 (23%), Positives = 100/255 (39%), Gaps = 31/255 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           N+L+ KVA++TGG  GIG   A  +   GA V    +    +   Q+    +        
Sbjct: 2   NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA---DDHGQKVCNNIGSPDVIS- 57

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQ-YKAGSVEEIDEERLERVFR 156
                +  D+  DE+ + +VD  +  +GK+DI+  N  V      S+ E   E  +RV  
Sbjct: 58  ----FVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMD 113

Query: 157 TNIFSHFFMTRHSLRHMNEGSA-----IINTTSVEPLWHSP------------EARGLAL 199
            N++  F + +H+ R M            + +S                        L  
Sbjct: 114 INVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCT 173

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSF----SEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           +L E GIRVN V+P  + +PL+   F    S  E     +        +  +VA    +L
Sbjct: 174 ELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL 233

Query: 256 ACNHCSSYITGQVLH 270
           A +  S Y++G  L 
Sbjct: 234 AGDE-SKYVSGLNLV 247

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  166 bits (420), Expect = 4e-51
 Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 33/255 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
              K  +VTGG+ GIG A     A  GA VA  Y       DA E  E + +      K 
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRS---AADAVEVTEKVGKEFGVKTK- 62

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
             A   D+   +   + + ++    G I  L+ NA V        E+  E    V+  N+
Sbjct: 63  --AYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNV 119

Query: 160 FSHFFMTRHSLRH---MNEGSAIINTTSVEPLWHSPEA---------------------R 195
           F  F   R   +      +  +I+ T+S+     +  +                     +
Sbjct: 120 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 179

Query: 196 GLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           GLA +    GIRVN ++PG + T    +   ++      S +P+ R  QP E+    + L
Sbjct: 180 GLAAEWASAGIRVNALSPGYVNTDQT-AHMDKKIRDHQASNIPLNRFAQPEEMTGQAILL 238

Query: 256 ACNHCSSYITGQVLH 270
             +H ++Y+TG    
Sbjct: 239 LSDH-ATYMTGGEYF 252

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  164 bits (417), Expect = 8e-51
 Identities = 53/249 (21%), Positives = 95/249 (38%), Gaps = 35/249 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
             G  ALVTG   GIGR         GA V      + +     +    +          
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIE--------- 53

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +  DLG  +      ++ +   G +D+LVNNAA+        E+ +E  +R F  N+
Sbjct: 54  --PVCVDLGDWD----ATEKALGGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNL 106

Query: 160 FSHFFMTRHSLRHMNEGSA---IINTTSVEPLWHSPE--------------ARGLALQLV 202
            S F +++   R M        I+N +S+      P                + +A++L 
Sbjct: 107 RSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 166

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              IRVN V P  + T +     ++ E + +     P+++  +  +V    +FL  +  S
Sbjct: 167 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR-S 225

Query: 262 SYITGQVLH 270
           +  +G  + 
Sbjct: 226 ASTSGGGIL 234

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  165 bits (420), Expect = 2e-50
 Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 31/248 (12%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +  G+V LVTG   G+GRA A  +A  GA V    +   + K   +      +      +
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDL-GGDFKGVGKGSSAADKVVEEIRR 62

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                 A+    E  +++V   ++ +G+ID++VNNA +  +  S   I +E  + + R +
Sbjct: 63  RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI-LRDRSFSRISDEDWDIIQRVH 121

Query: 159 IFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSP--------------EARGLALQLV 202
           +   F +TR +  HM       II T S   ++ +                A  L ++  
Sbjct: 122 LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR 181

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS 262
           +  I  N +AP         +   E           +  A +P  VAP  ++L   H S 
Sbjct: 182 KNNIHCNTIAPNAGSRM-TETVMPE----------DLVEALKPEYVAPLVLWLC--HESC 228

Query: 263 YITGQVLH 270
              G +  
Sbjct: 229 EENGGLFE 236

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  163 bits (414), Expect = 3e-50
 Identities = 72/250 (28%), Positives = 110/250 (44%), Gaps = 34/250 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S +L GKVALV+GG  G+G +       EGA V F  +  +E K     L          
Sbjct: 1   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---------- 50

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
           A     +  D+      K  VD  V A+G + +LVNNA +    G++E+      +R+  
Sbjct: 51  ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRILD 109

Query: 157 TNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE--------------ARGLALQ 200
            N+   F   R  ++ M E    +IIN +S+E L  +                 +  AL+
Sbjct: 110 VNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALE 169

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC 260
           L   GIRVN + PG + TP+       +   +   +  + RA +P+EV+   V+LA +  
Sbjct: 170 LGPSGIRVNSIHPGLVKTPMT------DWVPEDIFQTALGRAAEPVEVSNLVVYLASDE- 222

Query: 261 SSYITGQVLH 270
           SSY TG    
Sbjct: 223 SSYSTGAEFV 232

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 3e-50
 Identities = 57/249 (22%), Positives = 95/249 (38%), Gaps = 35/249 (14%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L G+  LVTG   GIGR         GA V         + D    +      +      
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVRECPGIE------ 55

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +  DLG  E      +  + + G +D+LVNNAAV        E+ +E  +R F  N+
Sbjct: 56  --PVCVDLGDWEA----TERALGSVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNL 108

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
            +   +++   R +       AI+N +S                        + +AL+L 
Sbjct: 109 RAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG 168

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEESAQ-FGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
              IRVN V P  + T +  +++S+   A+   + +P+ +  +   V    +FL  +  S
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR-S 227

Query: 262 SYITGQVLH 270
              TG  L 
Sbjct: 228 GMTTGSTLP 236

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  163 bits (413), Expect = 9e-50
 Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 39/260 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           KL+G+  L+TGG SG+GRA+   +  EGA VA     ++           L E +T    
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAER----------LAELETDHGD 51

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE----RV 154
           + + I  D+   E+ K+     V  +GKID L+ NA +   + ++ ++ EE L+     V
Sbjct: 52  NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEV 111

Query: 155 FRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE--------------ARGLAL 199
           F  N+  +    +  L  +      +I T S    + +                 R LA 
Sbjct: 112 FHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAF 171

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSF---------SEEESAQFGSEVPMKRAGQPIEVAP 250
           +L    +RVNGV  G I + L   S          +   +    S +P+ R  +  E   
Sbjct: 172 EL-APYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTG 230

Query: 251 CYVFLACNHCSSYITGQVLH 270
            YVF A    ++  TG +L+
Sbjct: 231 AYVFFATRGDAAPATGALLN 250

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  162 bits (411), Expect = 9e-50
 Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 35/261 (13%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
           S  L GKVAL TG   GIGR +A      GA+V   Y      K A+E +  L++     
Sbjct: 1   SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNY--GSSSKAAEEVVAELKKLGA-- 56

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFR 156
               +AI AD+        + D+ V+ +G +D +++N+ ++       E+ +E  ++VF 
Sbjct: 57  --QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFN 113

Query: 157 TNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQL 201
            N    FF+ +  L+H   G  II T+S+  +                     R  A+  
Sbjct: 114 LNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDC 173

Query: 202 VERGIRVNGVAPGPIWTPLIPSSF------------SEEESAQFGSEVPMKRAGQPIEVA 249
             +G+ VN +APG + T +   +              E+      +  P+KR G P ++ 
Sbjct: 174 GAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG 233

Query: 250 PCYVFLACNHCSSYITGQVLH 270
                L     S +I GQV+ 
Sbjct: 234 RAVSALCQEE-SEWINGQVIK 253

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  161 bits (407), Expect = 5e-49
 Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 29/255 (11%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +   +V L+TGG SG+GRA A   A EGA ++   V    E        +L  A  ++  
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS--SEGLEASKAAVLETAPDAEV- 57

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
             +   AD+  +   +  V      +G+ID   NNA ++ K    E       ++V   N
Sbjct: 58  --LTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSIN 115

Query: 159 IFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +   F      L+ M E     ++NT SV  +                    R  A++  
Sbjct: 116 LRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG 175

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFS-------EEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
             GIR+N +APG IWTP++ +S          + + +F    P KR G+  E+A    FL
Sbjct: 176 RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFL 235

Query: 256 ACNHCSSYITGQVLH 270
             +  +SY+   V+ 
Sbjct: 236 LSDD-ASYVNATVVP 249

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (406), Expect = 5e-49
 Identities = 64/257 (24%), Positives = 102/257 (39%), Gaps = 45/257 (17%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKVALVTG   GIGRA A    L+GA VA        E   Q    +  + +       +
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN--LEAGVQCKAALHEQFEPQKT---L 57

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
            I  D+   +  +    +VV+ +G++DILVNNA V          +E+  E+  + N+ S
Sbjct: 58  FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVS 108

Query: 162 HFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSP----------------EARGLALQ 200
               T   L +M++     G  IIN +S+  L                     +  LA  
Sbjct: 109 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 168

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQ-------FGSEVPMKRAGQPIEVAPCYV 253
           L+  G+R+N + PG + T ++ S   EE   Q           +       P  +A   +
Sbjct: 169 LMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 228

Query: 254 FLACNHCSSYITGQVLH 270
            L  +     + G ++ 
Sbjct: 229 TLIED---DALNGAIMK 242

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  160 bits (406), Expect = 7e-49
 Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 26/249 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L GKV ++TG  +G+G+++A  +A E A V   Y    +E +A   LE +++       +
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--KEDEANSVLEEIKKV----GGE 58

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +A+  D+  + +   +V   +  +GK+D+++NNA ++    S  E+      +V  TN+
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNL 117

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE--------------ARGLALQLV 202
              F  +R ++++  E      +IN +SV      P                  LAL+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 203 ERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLACNHCS 261
            +GIRVN + PG I TP+    F++ E  A   S +PM   G+P E+A    +LA +  +
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE-A 236

Query: 262 SYITGQVLH 270
           SY+TG  L 
Sbjct: 237 SYVTGITLF 245

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  160 bits (405), Expect = 7e-49
 Identities = 39/251 (15%), Positives = 71/251 (28%), Gaps = 38/251 (15%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L  K  +      GIG   +               + +      E   I  +   +    
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNIT---- 58

Query: 100 PMAISADLGFD-ENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
               + D+       K+++ ++ +    +DIL+N A +          D+ ++ER    N
Sbjct: 59  --FHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAIN 107

Query: 159 IFSHFFMTRHSLRHMN-----EGSAIINTTSVEPLWHSPE--------------ARGLAL 199
                  T   L   +      G  I N  SV       +                 LA 
Sbjct: 108 FTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAK 167

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
                G+    + PG   TPL+ +  S  +     +E+ +    Q  E        A   
Sbjct: 168 LAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA--- 224

Query: 260 CSSYITGQVLH 270
             +   G +  
Sbjct: 225 IEANKNGAIWK 235

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  160 bits (405), Expect = 9e-49
 Identities = 72/253 (28%), Positives = 109/253 (43%), Gaps = 31/253 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+G  ALVTGG  GIG A+    A  GA V         EK+  E LEI RE       +
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN---EKELDECLEIWREK----GLN 56

Query: 100 PMAISADLGFDENCKRVVDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
                 DL       +++  V + + GK++ILVNN A        ++  E+    +  TN
Sbjct: 57  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNN-AGVVIHKEAKDFTEKDYNIIMGTN 115

Query: 159 IFSHFFMTRHSLRHMNEG-----SAIINTTSVEPLWHSPE-----------ARGLALQLV 202
             + + +++ +   +          + +      L                 + LA +  
Sbjct: 116 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 175

Query: 203 ERGIRVNGVAPGPIWTPLIPSSF-----SEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           +  IRVN VAPG I TPL+ ++       +EE   F  + PM RAG+P EV+    FL  
Sbjct: 176 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCF 235

Query: 258 NHCSSYITGQVLH 270
              +SYITGQ++ 
Sbjct: 236 PA-ASYITGQIIW 247

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  159 bits (404), Expect = 1e-48
 Identities = 68/250 (27%), Positives = 101/250 (40%), Gaps = 30/250 (12%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           N L GK  ++TGG  G+G   A      GA V    V   +E+ A    E+   A+    
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL--DEEGAATARELGDAAR---- 54

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
                   D+  +E+ +RVV      +G +D LVNNA        +E    ER  +V   
Sbjct: 55  ----YQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAG-ISTGMFLETESVERFRKVVEI 109

Query: 158 NIFSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQL 201
           N+   F   +  +  M    G +I+N +S   L                   ++  A++L
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL 169

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAG-QPIEVAPCYVFLACNHC 260
               IRVN V PG  +TP+  +     +        PM R G +P E+A   V L  +  
Sbjct: 170 GTDRIRVNSVHPGMTYTPMT-AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT- 227

Query: 261 SSYITGQVLH 270
           SSY+TG  L 
Sbjct: 228 SSYVTGAELA 237

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  159 bits (402), Expect = 1e-48
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 26/245 (10%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GK  LVTG  SGIGRA    +A EGA++     + +   +A   LE           
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----------A 51

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           + +A+ AD+   +  + V  E +  +G++  + + A V + +     +  E  E+V R N
Sbjct: 52  EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVN 110

Query: 159 IFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------------ARGLALQLVERG 205
           +   F + R +   + EG +++ T SV  L                  AR LAL+L  +G
Sbjct: 111 LTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKG 170

Query: 206 IRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYIT 265
           +RVN + PG I TP+  +        Q     P+ RAG+P EVA   +FL     S+YIT
Sbjct: 171 VRVNVLLPGLIQTPMT-AGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE-SAYIT 228

Query: 266 GQVLH 270
           GQ L+
Sbjct: 229 GQALY 233

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  156 bits (395), Expect = 4e-47
 Identities = 75/262 (28%), Positives = 119/262 (45%), Gaps = 35/262 (13%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
            S  L GKVALVTG   GIGR +A      G  V   Y  S E   A+E +  +++    
Sbjct: 12  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE--SAEEVVAAIKK---- 65

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVF 155
           +  D   + A++G  E+  R+ +E V  +GK+DI+ +N+      G V+++  E  +RVF
Sbjct: 66  NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSG-VVSFGHVKDVTPEEFDRVF 124

Query: 156 RTNIFSHFFMTRHSLRH-MNEGSAIINTTSVEPLWHSPE--------------ARGLALQ 200
             N    FF+ R + +H    G  I+  +        P+              AR +A+ 
Sbjct: 125 TINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAID 184

Query: 201 LVERGIRVNGVAPGPIWTPLIPS------------SFSEEESAQFGSEVPMKRAGQPIEV 248
           + ++ I VN VAPG I T +  +            S  E +        P++R G PI++
Sbjct: 185 MADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 244

Query: 249 APCYVFLACNHCSSYITGQVLH 270
           A    FLA N    ++TG+V+ 
Sbjct: 245 ARVVCFLASND-GGWVTGKVIG 265

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  154 bits (389), Expect = 6e-46
 Identities = 54/253 (21%), Positives = 98/253 (38%), Gaps = 25/253 (9%)

Query: 36  PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS 95
           P N  +GKVA +TGG +G+G+ +    +  GA       K       + T E +     +
Sbjct: 19  PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK---MDVLKATAEQISSQTGN 75

Query: 96  DAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEE--RLER 153
                 AI  D+   +  +  V E++   G  +I++NNAA  + + +          +  
Sbjct: 76  KVH---AIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITD 132

Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLAL 199
           +               L    +G+A ++ T++     S                ++ LA 
Sbjct: 133 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAA 192

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEES--AQFGSEVPMKRAGQPIEVAPCYVFLAC 257
           +  + G+R N + PGPI T    S      +   +    +P  R G   E+A    FL  
Sbjct: 193 EWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCS 252

Query: 258 NHCSSYITGQVLH 270
           ++ +S+I G V+ 
Sbjct: 253 DY-ASWINGAVIK 264

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  152 bits (385), Expect = 9e-46
 Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 37/257 (14%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            +VALVTG  SGIG  +A     EG  V         E+  + TL+ LREA      +  
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARG---EEGLRTTLKELREAGV----EAD 54

Query: 102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFS 161
             + D+      + +V  VV  YG +D+LVNNA  +   G+  E+ +E    V  TN+  
Sbjct: 55  GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTG 113

Query: 162 HFFMTRHSLRHM---NEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE 203
            F +T+  L+       G+  I   +                         + L L+L  
Sbjct: 114 VFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 173

Query: 204 RGIRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEVAPCYV 253
            GI VN V PG + TP+  S            +EE   +  + VP+ R  QP EVA    
Sbjct: 174 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA 233

Query: 254 FLACNHCSSYITGQVLH 270
           +L     ++ +T Q L+
Sbjct: 234 YLIGPG-AAAVTAQALN 249

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  151 bits (382), Expect = 1e-45
 Identities = 64/247 (25%), Positives = 96/247 (38%), Gaps = 40/247 (16%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           +R K  LV     GIGRAVA   + EGA V       +  K +                 
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-------------- 47

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +  DL      ++ +D +     ++DILV NA    KAG  +E+  E  +    +  
Sbjct: 48  --YVVCDL------RKDLDLLFEKVKEVDILVLNA-GGPKAGFFDELTNEDFKEAIDSLF 98

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------------ARGLALQLVE 203
            +   + R+ L  M E               SP                  + L+ ++  
Sbjct: 99  LNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP 158

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
            GI VN VAPG   T  +    SEE+  Q  S++PM+R  +P E+A    FL     +SY
Sbjct: 159 YGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK-ASY 217

Query: 264 ITGQVLH 270
           +TGQ + 
Sbjct: 218 LTGQTIV 224

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  148 bits (374), Expect = 3e-44
 Identities = 71/259 (27%), Positives = 102/259 (39%), Gaps = 39/259 (15%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           +L GK AL+TG   GIGRA A  Y  EGA VA   +           LE  R        
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADIN----------LEAARATAAEIGP 51

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
              AI+ D+    +  R V E+++ +G IDILVNN A  +    + EI  E  +R+F  N
Sbjct: 52  AACAIALDVTDQASIDRCVAELLDRWGSIDILVNN-AALFDLAPIVEITRESYDRLFAIN 110

Query: 159 IFSHFFMTRHSLRHMNE-----------------GSAIINTTSVEPLWHSPEARGLALQL 201
           +    FM +   R M                   G A++              +   L L
Sbjct: 111 VSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNL 170

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFS----------EEESAQFGSEVPMKRAGQPIEVAPC 251
           +  GI VN +APG +         +           E+  Q G+ VP  R G+  ++   
Sbjct: 171 IRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGM 230

Query: 252 YVFLACNHCSSYITGQVLH 270
            +FLA    + YI  Q  +
Sbjct: 231 AIFLATPE-ADYIVAQTYN 248

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  147 bits (372), Expect = 6e-44
 Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 26/247 (10%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
              KVALVTG   GIGR +A   A   + V         +K     ++ ++        +
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT---QKSCDSVVDEIKSFG----YE 60

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
               + D+   E    V+++++  +  +DI + N A   +      +  +  E V RTN+
Sbjct: 61  SSGYAGDVSKKEEISEVINKILTEHKNVDI-LVNNAGITRDNLFLRMKNDEWEDVLRTNL 119

Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            S F++T+   + M  N    IIN +S+  L  +                 + LA +L  
Sbjct: 120 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 179

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           R I VN +APG I + +     SE+      S +P  R G P EVA    FL+ +  S Y
Sbjct: 180 RNITVNAIAPGFISSDMTD-KISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDK-SGY 237

Query: 264 ITGQVLH 270
           I G+V  
Sbjct: 238 INGRVFV 244

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  145 bits (367), Expect = 2e-43
 Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 24/244 (9%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            V +VTG   GIG+A+A      G  V   Y +S   K A+E  + +           + 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS--AKAAEEVSKQIEAYG----GQAIT 55

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              D+  + + + ++   ++A+G ID+ V N A   +   +  + + + + V   N+   
Sbjct: 56  FGGDVSKEADVEAMMKTAIDAWGTIDV-VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGV 114

Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPLWHSP--------------EARGLALQLVERGI 206
           F  T+ + + M       IIN  SV  L  +                ++  A +   R I
Sbjct: 115 FLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNI 174

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
            VN V PG I + +  +   E+   +    +P+ R GQP  VA    FLA +  +SYITG
Sbjct: 175 NVNVVCPGFIASDMT-AKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITG 233

Query: 267 QVLH 270
           Q   
Sbjct: 234 QAFT 237

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  146 bits (368), Expect = 3e-43
 Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 29/251 (11%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           L GK ALV G      +G A+A      GA VA +Y   +   +A++  E          
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAE--------AL 57

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERV 154
              +   AD+  DE    +   V  A+G +D LV+  A   +    G   +   +     
Sbjct: 58  GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 155 FRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQ 200
              + +S   + R +   + EG  I+  T        P+               R LA +
Sbjct: 118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE 177

Query: 201 LVERGIRVNGVAPGPIWTP-LIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH 259
           L  +G+RVN ++ GP+ T          +   +     P++R     EV    +FL    
Sbjct: 178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237

Query: 260 CSSYITGQVLH 270
            +S ITG+V++
Sbjct: 238 -ASGITGEVVY 247

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 3e-43
 Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 40/255 (15%)

Query: 38  NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
            +L GKV ++T    GIG+A A  +A EGA V  T                + E+K  + 
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATD---------------INESKLQEL 46

Query: 98  KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRT 157
           +    I   +  D   K+ +D+  N   ++D+L N A   +  G+V + +E+  +     
Sbjct: 47  EKYPGIQTRV-LDVTKKKQIDQFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNL 104

Query: 158 NIFSHFFMTRHSLRHM--NEGSAIINTTSV----EPLWHSPE-----------ARGLALQ 200
           N+ S + M +  L  M   +   IIN +SV    + + +               + +A  
Sbjct: 105 NVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAAD 164

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEES-----AQFGSEVPMKRAGQPIEVAPCYVFL 255
            +++GIR N V PG + TP +        +       F       R     E+A   V+L
Sbjct: 165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL 224

Query: 256 ACNHCSSYITGQVLH 270
           A +  S+Y+TG  + 
Sbjct: 225 ASDE-SAYVTGNPVI 238

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  145 bits (365), Expect = 8e-43
 Identities = 62/260 (23%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK-DPMA 102
            A++TGG   IG ++A     +G  V   Y  S  E  AQ  +  L  A+   A      
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS--EGAAQRLVAELNAARAGSAVLCKGD 60

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE----------EIDEERLE 152
           +S      + C+ ++D    A+G+ D+LVNNA+  Y    +           +  + ++ 
Sbjct: 61  LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVA 120

Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------------------- 193
            +F +N  +  F+ R   R   EG A  +                               
Sbjct: 121 ELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALG 180

Query: 194 --ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVAP 250
              R  AL+L  R IRVN VAPG       P +  +E   ++  +VP+ +      ++A 
Sbjct: 181 GLTRAAALELAPRHIRVNAVAPGLSLL---PPAMPQETQEEYRRKVPLGQSEASAAQIAD 237

Query: 251 CYVFLACNHCSSYITGQVLH 270
              FL     + YITG  L 
Sbjct: 238 AIAFLVSKD-AGYITGTTLK 256

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  144 bits (364), Expect = 1e-42
 Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 34/258 (13%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           L+GKVA+VTG  SGIG  +A   A +GA +        +  + ++    L          
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG--DAAEIEKVRAGLAAQHGVKV-- 57

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   ADL   E  + +VD  V   G+IDILVNN A       +E+   E+ + +   N+
Sbjct: 58  -LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNN-AGIQHTALIEDFPTEKWDAILALNL 115

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPEA-------------RGLALQLVE 203
            + F  T  +L HM +   G  I   ++   +  + ++             +  AL+   
Sbjct: 116 SAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAG 175

Query: 204 RGIRVNGVAPGPIWTPLIPSSFS-----------EEESAQFGSEVPMKRAGQPIEVAPCY 252
           +GI  N + PG + TPL+    S                    + P  +   P ++    
Sbjct: 176 QGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA 235

Query: 253 VFLACNHCSSYITGQVLH 270
           VFLA +  ++ ITG  + 
Sbjct: 236 VFLASDA-AAQITGTTVS 252

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  142 bits (359), Expect = 6e-42
 Identities = 69/263 (26%), Positives = 102/263 (38%), Gaps = 39/263 (14%)

Query: 39  KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAK 98
           K  GKV LVTG    IG A A   A EG  +A   +     +  ++    +RE       
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN---REALEKAEASVREKGV---- 54

Query: 99  DPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTN 158
           +  +   D+  +E     VD VV  +GKID L NNA  Q     V++   +   RV   N
Sbjct: 55  EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTIN 114

Query: 159 IFSHFFMTRHSLRHMNEGS--AIINTTSVEPLWHSPE--------------ARGLALQLV 202
           +   F + +   R M   +   I+NT S+  +   P                   AL L 
Sbjct: 115 VTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 174

Query: 203 ERGIRVNGVAPGPIWTPLI---------------PSSFSEEESAQFGSEVPMKRAGQPIE 247
              IRVN ++PG +    +                S+  +  + Q    VPM+R G   E
Sbjct: 175 PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINE 234

Query: 248 VAPCYVFLACNHCSSYITGQVLH 270
           +     FL  +  SS++TG  L 
Sbjct: 235 IPGVVAFLLGDD-SSFMTGVNLP 256

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  141 bits (356), Expect = 1e-41
 Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 40/264 (15%)

Query: 37  SNKLRGKVALVTGGDSGIGRAVAHCYA---LEGATVAFTYVKSQEEKDAQETLEILREAK 93
           ++ L   V ++TG   G GRA+A   A     G+ +  +      E   ++  E L   +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS---ESMLRQLKEELGAQQ 57

Query: 94  TSDAKDPMAISADLGFDENCKRVV----DEVVNAYGKIDILVNNAAVQYKA--GSVEEID 147
                  +  +ADLG +   +R++    +       +  +L+NNAA       G +   D
Sbjct: 58  PDL--KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVND 115

Query: 148 EERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLWHSPE---------- 193
              +   +  N+ S   +T  +L    +       ++N +S+  L               
Sbjct: 116 LAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAA 175

Query: 194 ----ARGLALQLVERGIRVNGVAPGPIWTPLI----PSSFSEEESAQFGSEVPMKRAGQP 245
                + LA +  E  +RV   APGP+   +      +S   E  ++             
Sbjct: 176 RDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDC 233

Query: 246 IEVAPCYVFLACNHCSSYITGQVL 269
              A   + L      ++ +G  +
Sbjct: 234 GTSAQKLLGLLQK--DTFQSGAHV 255

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  139 bits (352), Expect = 5e-41
 Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 36/255 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           KVALVTG   GIG+A+A     +G  VA        +  A+     + +A        +A
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN---DATAKAVASEINQAG----GHAVA 54

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           +  D+   +     V++     G  D++VNNA V      +E I  E +++V+  N+   
Sbjct: 55  VKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS-TPIESITPEIVDKVYNINVKGV 113

Query: 163 FFMTRHSLRHMNE------------GSAIINTTSVEPLWHSPEA-----RGLALQLVERG 205
            +  + ++    +             +  +    +     S  A     +  A  L   G
Sbjct: 114 IWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLG 173

Query: 206 IRVNGVAPGPIWTPLIPSSF----------SEEESAQFGSEVPMKRAGQPIEVAPCYVFL 255
           I VNG  PG + TP+                   +A+F   + + R  +P +VA C  +L
Sbjct: 174 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 233

Query: 256 ACNHCSSYITGQVLH 270
           A    S Y+TGQ L 
Sbjct: 234 ASPD-SDYMTGQSLL 247

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  138 bits (349), Expect = 1e-40
 Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 29/247 (11%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
             GK+ALVTG   GIGRA+A   A  GA V  T      E  AQ   + L         +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATS---ENGAQAISDYLGA-------N 51

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +  ++    + + V++++   +G++DILVNNA +      +   DEE    +  TN+
Sbjct: 52  GKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW-NDIIETNL 110

Query: 160 FSHFFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            S F +++  +R M       II   SV     +                ++ LA ++  
Sbjct: 111 SSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVAS 170

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
           RGI VN VAPG I T +  +   ++  A   ++VP  R G   E+A    FLA +  ++Y
Sbjct: 171 RGITVNVVAPGFIETDMTRALSDDQR-AGILAQVPAGRLGGAQEIANAVAFLASDE-AAY 228

Query: 264 ITGQVLH 270
           ITG+ LH
Sbjct: 229 ITGETLH 235

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  137 bits (345), Expect = 3e-40
 Identities = 67/252 (26%), Positives = 98/252 (38%), Gaps = 39/252 (15%)

Query: 35  KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT 94
           KP      +  LVTGG+ GIG A+A   A +G  VA T+  S   K              
Sbjct: 2   KPP--FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------------ 47

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
                   +  D+   +   R    V    G +++LV+N A       +  + EE+ E+V
Sbjct: 48  ------FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN-AGLSADAFLMRMTEEKFEKV 100

Query: 155 FRTNIFSHFFMTRHSLRHMNEGS--AIINTTSVEPLWHSPEA--------------RGLA 198
              N+   F + + + R M       +I   SV  LW                   R +A
Sbjct: 101 INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIA 160

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            +L +  +  N VAPG I T +   +  E         +P KR G P EVA    FLA  
Sbjct: 161 RELSKANVTANVVAPGYIDTDMT-RALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASE 219

Query: 259 HCSSYITGQVLH 270
             +SYI+G V+ 
Sbjct: 220 D-ASYISGAVIP 230

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 5e-40
 Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 38/229 (16%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           + G++ L+TG   GIGR  A+ +A   + +    +    +   +ET    +         
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN---KHGLEETAAKCKGL----GAK 57

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                 D    E+      +V    G + ILVNNA V Y    +    + ++E+ F  N+
Sbjct: 58  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT-SDLFATQDPQIEKTFEVNV 116

Query: 160 FSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVE 203
            +HF+ T+  L  M +     I+   S       P                + L  +L  
Sbjct: 117 LAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 176

Query: 204 ---RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVA 249
               G++   + P  + T  I                 +    +P EV 
Sbjct: 177 LQITGVKTTCLCPNFVNTGFIK-----------NPSTSLGPTLEPEEVV 214

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  131 bits (331), Expect = 5e-38
 Identities = 53/252 (21%), Positives = 85/252 (33%), Gaps = 46/252 (18%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           + ALVTGG SG+GRA A      G  V    ++                    + +D + 
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRR-------------------EGEDLIY 42

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNN--AAVQYKAGSVEEIDEERLERVFRTNIF 160
           +  D+  +E+ +R V           ++        +   G       E   RV   N+ 
Sbjct: 43  VEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLL 102

Query: 161 SHFFMTRHSLRHMNEG--------SAIINTTSVEPLWHSPE--------------ARGLA 198
             F + R +   M E           I+NT SV                          A
Sbjct: 103 GTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAA 162

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN 258
            +L   GIRV  VAPG   TPL+     + +++         R G+P E A   + +   
Sbjct: 163 RELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHIL-- 220

Query: 259 HCSSYITGQVLH 270
             +  + G+V+ 
Sbjct: 221 -ENPMLNGEVVR 231

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  129 bits (325), Expect = 3e-37
 Identities = 36/247 (14%), Positives = 72/247 (29%), Gaps = 45/247 (18%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
            +  LV GG   +G      +      VA   V   EE  A                   
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASV----------------- 44

Query: 102 AISADLGFDENCKRVVDEVVNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +     F E   +V  EV    G  K+D ++  A       +  +   +  + +++ +I
Sbjct: 45  IVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSI 104

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLALQL--VE 203
           ++    +  + +H+ EG  +    +   L  +P                + LA +   + 
Sbjct: 105 WTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMP 164

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
            G     V P  + TP+   S  E                    +   +      +    
Sbjct: 165 SGAAAIAVLPVTLDTPMNRKSMPEA---------DFSSWTPLEFLVETFHDWITGN-KRP 214

Query: 264 ITGQVLH 270
            +G ++ 
Sbjct: 215 NSGSLIQ 221

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  128 bits (323), Expect = 9e-37
 Identities = 56/253 (22%), Positives = 95/253 (37%), Gaps = 30/253 (11%)

Query: 39  KLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
            L GK  LVTG  S   I   +A     EGA +AFTY   + +   +E    L       
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD---- 57

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAV----QYKAGSVEEIDEERLE 152
               + +  D+  D +   +  E+   + K D  V++       Q     V  +  E  +
Sbjct: 58  ----IVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFK 113

Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLA 198
                + +S   M +     +N GSA++  + +      P                R +A
Sbjct: 114 IAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMA 173

Query: 199 LQLVERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLAC 257
             +   G+RVN ++ GPI T          +  A   +  P++R     +V     FL  
Sbjct: 174 NAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 233

Query: 258 NHCSSYITGQVLH 270
           +  S+ I+G+V+H
Sbjct: 234 DL-SAGISGEVVH 245

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  127 bits (321), Expect = 1e-36
 Identities = 53/247 (21%), Positives = 87/247 (35%), Gaps = 29/247 (11%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            + L+TG   GIGRA+A  +A                      LE +     ++      
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           I+AD+    + +R+   +V  YG ID LVNN A   + G++ ++ EE  +    TN+   
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNN-AGVGRFGALSDLTEEDFDYTMNTNLKGT 120

Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
           FF+T+     M       I   TSV                         + L   +  +
Sbjct: 121 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 180

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITG 266
           R+  V PG ++TP+      E                 P ++A   V       S  +  
Sbjct: 181 RITDVQPGAVYTPMWGKVDDE----------MQALMMMPEDIAAPVVQAYLQP-SRTVVE 229

Query: 267 QV-LHPN 272
           ++ L P 
Sbjct: 230 EIILRPT 236

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (313), Expect = 2e-35
 Identities = 60/254 (23%), Positives = 92/254 (36%), Gaps = 32/254 (12%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           ++G VA++TGG SG+G A A     +GA+     + +   +   + L        +D   
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
              +   L   +     VD  VN  G        A+  Y     +    E  +RV   N+
Sbjct: 63  EKDVQTALALAKGKFGRVDVAVNCAGI-----AVASKTYNLKKGQTHTLEDFQRVLDVNL 117

Query: 160 FSHFFMTRHSLRHMNE--------GSAIINTTSVEPLWHSPE--------------ARGL 197
              F + R     M +           IINT SV                         +
Sbjct: 118 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 177

Query: 198 ALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVAPCYVFLA 256
           A  L   GIRV  +APG   TPL+ +S  E+      S+VP   R G P E A     + 
Sbjct: 178 ARDLAPIGIRVMTIAPGLFGTPLL-TSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII 236

Query: 257 CNHCSSYITGQVLH 270
               + ++ G+V+ 
Sbjct: 237 ---ENPFLNGEVIR 247

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  116 bits (291), Expect = 3e-32
 Identities = 29/247 (11%), Positives = 76/247 (30%), Gaps = 45/247 (18%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
           GKV +V GG   +G A+   +   G TV    + + ++ D+   ++              
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD-------------- 47

Query: 102 AISADLGFDENCKRVVDEVVNA--YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
               +  + E  + ++++  ++    ++D +   A       +  +   +  + + + ++
Sbjct: 48  ---GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSV 104

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTSV---EPLWHSPE-----------ARGLALQL--VE 203
           +S     + +  H+  G  +  T +     P                    LA +   + 
Sbjct: 105 WSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLP 164

Query: 204 RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY 263
               V  + P  + TP+                           ++   +       S  
Sbjct: 165 DNSAVLTIMPVTLDTPMNRKWMPNA---------DHSSWTPLSFISEHLLKWTTETSSRP 215

Query: 264 ITGQVLH 270
            +G +L 
Sbjct: 216 SSGALLK 222

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  113 bits (284), Expect = 1e-30
 Identities = 52/274 (18%), Positives = 87/274 (31%), Gaps = 50/274 (18%)

Query: 44  VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA------ 97
           VALVTG    +GR++A     EG  V   Y +S  E  A      L   + + A      
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE--ANALSATLNARRPNSAITVQAD 61

Query: 98  --------KDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVE----- 144
                         SA +     C  +V      +G+ D+LVNNA+  Y    +      
Sbjct: 62  LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDG 121

Query: 145 --------EIDEERLERVFRTNIFSHFFMT------RHSLRHMNEGSAIINTTSVEPLWH 190
                   E  E     +F +N  + +F+              + G+       V+ + +
Sbjct: 122 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 181

Query: 191 SPEARGLALQL-------------VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEV 237
            P        +             +E       V        ++             S+V
Sbjct: 182 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKV 241

Query: 238 PM-KRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
           P+ +R     EV+   +FL  +  + YITG  + 
Sbjct: 242 PLYQRDSSAAEVSDVVIFLCSSK-AKYITGTCVK 274

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 1e-30
 Identities = 39/248 (15%), Positives = 78/248 (31%), Gaps = 32/248 (12%)

Query: 33  DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREA 92
           +++P   L+GK  +VTG   GIGR +A+  A  GA V  T      ++  Q+ +    E 
Sbjct: 6   EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS---KETLQKVVSHCLEL 61

Query: 93  KTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLE 152
             + A        D       ++ V +     G +D+L+ N      + ++   D   + 
Sbjct: 62  GAASAHYIAGTMED---MTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVR 117

Query: 153 RVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGL 197
           +    N  S+  +T  +L  + + +  I   S      +                    +
Sbjct: 118 KSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSI 177

Query: 198 ALQLVERG--IRVNGVAPGPIWTPLIPSSFSEEESAQFGSE-------VPMKRAGQPIEV 248
             +       + +     G I T     + S     Q   +       +      Q    
Sbjct: 178 RKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVY 237

Query: 249 APCYVFLA 256
               ++  
Sbjct: 238 YDSSLWTT 245

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  112 bits (280), Expect = 2e-30
 Identities = 36/229 (15%), Positives = 67/229 (29%), Gaps = 46/229 (20%)

Query: 42  GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM 101
               +VTG + GIG  +      +             EK          E K+       
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK--------ATELKSIKDSRVH 54

Query: 102 AISADLGFDENCKRVVDEVVNAYGK--IDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
            +   +  D++    V +V    G   + +L+NNA V    G+  E +   +      N 
Sbjct: 55  VLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNT 114

Query: 160 FSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------------------------- 193
            S   +T+  L  +   ++  +   +     +                            
Sbjct: 115 TSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRM 174

Query: 194 --------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS--FSEEESAQ 232
                    R LA+ L +  + V    PG + T L   +   + E+S  
Sbjct: 175 SKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTA 223

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  110 bits (275), Expect = 2e-29
 Identities = 53/252 (21%), Positives = 100/252 (39%), Gaps = 29/252 (11%)

Query: 39  KLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSD 96
            L+GK  L+ G   +  I   +A     +GAT+AFTY+    EK  +   + L       
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSP---- 57

Query: 97  AKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLER 153
                    D+  +E+ K + + V    G +D +V++ A   K    GS+ E  +     
Sbjct: 58  ----YVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNT 113

Query: 154 VFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------------ARGLAL 199
               +++S   +T      +N G++++  + +    +                  R LA+
Sbjct: 114 AMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAV 173

Query: 200 QLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG-SEVPMKRAGQPIEVAPCYVFLACN 258
            L +  IRVN ++ GPI T             ++     P+++     EV    ++L  +
Sbjct: 174 DLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS 233

Query: 259 HCSSYITGQVLH 270
             SS ++G+V  
Sbjct: 234 L-SSGVSGEVHF 244

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 2e-29
 Identities = 48/263 (18%), Positives = 82/263 (31%), Gaps = 38/263 (14%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            V L+TG  SGIG  +A   A + +     Y   ++ K      E  R            
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA-CPPGSLET 61

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
           +  D+   ++     + V      +   +   A     G +E + E+ +  V   N+   
Sbjct: 62  LQLDVRDSKSVAAARERVTEGRVDV---LVCNAGLGLLGPLEALGEDAVASVLDVNVVGT 118

Query: 163 FFMTRHSLRHM--NEGSAIINTTSVEPLWHSPE--------------ARGLALQLVERGI 206
             M +  L  M       ++ T SV  L   P                  LA+ L+  G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 207 RVNGVAPGPIWTPLIPSSFSEEESA----------------QFGSEVPMKRAGQPIEVAP 250
            ++ +  GP+ T  +       E                      +V  + A  P EVA 
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 251 CYVFL--ACNHCSSYITGQVLHP 271
            ++    A      Y T +   P
Sbjct: 239 VFLTALRAPKPTLRYFTTERFLP 261

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  106 bits (266), Expect = 2e-28
 Identities = 44/267 (16%), Positives = 81/267 (30%), Gaps = 64/267 (23%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            + +++G  +GIG A        G  +    ++  E                        
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------ 37

Query: 103 ISADLGFDENCKRVVDEVVNAYGK-IDILVNNAAVQYKAGSVEEIDEERLERVFRTN--- 158
           + ADL   E  K+ + +V+    K +D LV  A +  +   +  +               
Sbjct: 38  VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAF 97

Query: 159 ------------------IFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-------- 192
                               +H    ++ L    E        ++               
Sbjct: 98  LPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAG 157

Query: 193 -------EARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSE--VPMKRAG 243
                    R  A    E G+R+N +APG   TPL+ +   +    +  ++   PM R  
Sbjct: 158 SKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA 217

Query: 244 QPIEVAPCYVFLACNHCSSYITGQVLH 270
           +P E+A    FL     +SY+ G  + 
Sbjct: 218 EPSEMASVIAFLMSPA-ASYVHGAQIV 243

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 4e-26
 Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 7/143 (4%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
            VALVTGG+ GIG A+        +       +       Q  ++ L+    S    P  
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR--GQAAVQQLQAEGLS----PRF 57

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
              D+   ++ + + D +   YG +D+LVNNA + +   +       + E   +TN F  
Sbjct: 58  HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGT 116

Query: 163 FFMTRHSLRHMNEGSAIINTTSV 185
             +    L  +     ++N +S+
Sbjct: 117 RDVCTELLPLIKPQGRVVNVSSI 139

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 2e-06
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 15/78 (19%)

Query: 194 ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
           AR L+ Q     I +N   PG + T +        +S + G+E P+  A  P +      
Sbjct: 207 ARKLSEQRKGDKILLNACCPGWVRTDMAGPKA--TKSPEEGAETPVYLALLPPDAE---- 260

Query: 254 FLACNHCSSYITGQVLHP 271
                       GQ +  
Sbjct: 261 ---------GPHGQFVSE 269

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 92.5 bits (228), Expect = 6e-23
 Identities = 39/261 (14%), Positives = 70/261 (26%), Gaps = 30/261 (11%)

Query: 37  SNKLRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT 94
           +  L GK  LV+G   DS I   +A     +GA +  T       +  Q   + L     
Sbjct: 1   TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF--DRLRLIQRITDRLPAKAP 58

Query: 95  SDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERV 154
               D                 +       G +  +              +     + + 
Sbjct: 59  LLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKG 118

Query: 155 FRTNIFSHFFMTRHSL-------------RHMNEGSAIINTTSVEPLWHSPEARGLALQL 201
              + +S+  M +  L                +      N  +V         R +A + 
Sbjct: 119 IHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREA 178

Query: 202 VERGIRVNGVAPGPIWTPLIPSSFSEEES-----------AQFGSEVPMKR-AGQPIEVA 249
            + G+R N VA GPI T  + +                    +    P+         VA
Sbjct: 179 GKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA 238

Query: 250 PCYVFLACNHCSSYITGQVLH 270
                L  +      TG +++
Sbjct: 239 KTVCALLSDW-LPATTGDIIY 258

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 93.4 bits (230), Expect = 9e-23
 Identities = 38/317 (11%), Positives = 82/317 (25%), Gaps = 89/317 (28%)

Query: 42  GKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKS---------QEEKDAQETLEILR 90
             +  + G    +G G  +A   +     + F              +  K   + +    
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 91  EAKTSDAKDPMAISA----------------DLGFDENCKRVVDEVVNAYGKIDILVNNA 134
           +        P   S                 ++  +   + V + +   YGKI++LV++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 135 AVQ-YKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE 193
           A        +     +        + +S   + ++ +  M   S+II+ T        P 
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG 181

Query: 194 ARGLALQLV----------------ERGIRVNGVAPGPIWT------------------- 218
             G                         IR+N ++ GP+ +                   
Sbjct: 182 YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQ 241

Query: 219 -------------------------PLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYV 253
                                         +F +          P+++     ++     
Sbjct: 242 NKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVAS 301

Query: 254 FLACNHCSSYITGQVLH 270
           FL     S  ITGQ ++
Sbjct: 302 FLLSRE-SRAITGQTIY 317

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 87.5 bits (215), Expect = 9e-21
 Identities = 49/276 (17%), Positives = 83/276 (30%), Gaps = 46/276 (16%)

Query: 40  LRGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDA 97
           LRGK A + G   D+G G AVA   A  GA +                     +      
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 98  KDPMAISA-------------------------DLGFDENCKRVVDEVVNAYGKIDILVN 132
              +                                 +   +   + V   +G IDILV+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 133 NA-AVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS------- 184
           +       +  + E   +        + +S   +  H L  MN G A I+ T        
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185

Query: 185 ---------VEPLWHSPEARGLALQLVERGIRVNGVAPGPIWTPLIPS-SFSEEESAQFG 234
                     +    S           ++ IRVN ++ GP+ +    +  F +       
Sbjct: 186 PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSY 245

Query: 235 SEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLH 270
           +  P+++     EV     FL     +S ITG  ++
Sbjct: 246 NNAPIQKTLTADEVGNAAAFLVSPL-ASAITGATIY 280

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 83.6 bits (205), Expect = 9e-20
 Identities = 31/262 (11%), Positives = 77/262 (29%), Gaps = 54/262 (20%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
              L+TG + G+G  +              +   +  + A+E  ++ +            
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNI-----HI 57

Query: 103 ISADLGFDENCKRVVDE--VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIF 160
           +  DL   +   ++V +   V     +++L NNA +  K+  +  +  + L    +TN  
Sbjct: 58  LEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTV 117

Query: 161 SHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEA-------------------------- 194
               + +  L  + + +    +  +     +                             
Sbjct: 118 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSAL 177

Query: 195 ----RGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAP 250
               + L++ L  + I    + PG + T +             GS  P+       ++  
Sbjct: 178 NAATKSLSVDLYPQRIMCVSLHPGWVKTDM------------GGSSAPLDVPTSTGQIVQ 225

Query: 251 CYVFLACNHCSSYITGQVLHPN 272
               L          G  ++ +
Sbjct: 226 TISKLG-----EKQNGGFVNYD 242

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 63.1 bits (152), Expect = 2e-12
 Identities = 38/214 (17%), Positives = 61/214 (28%), Gaps = 20/214 (9%)

Query: 30  TSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEI 88
           T  ++KP         LVTGG  G+G  +A   A  GA  +        +   A E +  
Sbjct: 2   TDDEWKP-----TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAE 56

Query: 89  LREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDE 148
           L             ++      E                   V +AA     G+V+ +  
Sbjct: 57  LEALGARTTVAACDVTDRESVRELLGG------IGDDVPLSAVFHAAATLDDGTVDTLTG 110

Query: 149 ERLERVFRTNIFSHFFMTRHSLRHMNEGSAII-NTTSVEPLWHSP-------EARGLALQ 200
           ER+ER  R  +     +   +         +  +  S                  GLA Q
Sbjct: 111 ERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQ 170

Query: 201 LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFG 234
               G+    VA G      +      +   + G
Sbjct: 171 RRSDGLPATAVAWGTWAGSGMAEGPVADRFRRHG 204

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 61.8 bits (149), Expect = 3e-12
 Identities = 14/149 (9%), Positives = 34/149 (22%), Gaps = 23/149 (15%)

Query: 40  LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD 99
           ++GK A+V  G   +G   A          A   +  ++   AQ   + + +    +   
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALL---AGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA 77

Query: 100 PMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNI 159
                                  A      +    A+      +E + +   +      I
Sbjct: 78  AETAD------------DASRAEAVKGAHFVFTAGAI-----GLELLPQAAWQNESSIEI 120

Query: 160 FSHFFMTRHSLRHMNE---GSAIINTTSV 185
            + +           +             
Sbjct: 121 VADYNAQPPLGIGGIDATDKGKEYGGKRA 149

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 61.6 bits (148), Expect = 5e-12
 Identities = 24/191 (12%), Positives = 51/191 (26%), Gaps = 23/191 (12%)

Query: 43  KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMA 102
           +VAL+ G    +G+ +A   A  G  +      S+ E+ A+      R      A D   
Sbjct: 2   RVALLGGT-GNLGKGLALRLATLGHEIVVG---SRREEKAEAKAAEYRRI----AGDASI 53

Query: 103 ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSH 162
                        +    +     ID   +   +  +   V  +          T     
Sbjct: 54  TGMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSER 113

Query: 163 FFMTRHSLRHMNEGSAIINTTSVEPLWHSP---------------EARGLALQLVERGIR 207
                 +    +E       T     + +                E++ + + L+     
Sbjct: 114 SAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDG 173

Query: 208 VNGVAPGPIWT 218
           +  +  GP+  
Sbjct: 174 LRPLDAGPLSN 184

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 6/113 (5%)

Query: 28  QFTSHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLE 87
           +  ++     N+L GK  +V      +GR +A   A +GATV    V + ++    E+L+
Sbjct: 15  KIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK 74

Query: 88  ILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKA 140
           + +       +D    S DL   + C    D V+      +       ++  A
Sbjct: 75  LNK----HHVEDLGEYSEDL--LKKCSLDSDVVITGVPSENYKFPTEYIKEGA 121

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	272
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.98
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.75
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.69
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.67
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.67
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.62
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.6
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.6
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.59
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.59
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.57
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.56
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.56
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.55
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.55
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.54
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.54
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.53
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.52
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.51
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.48
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.45
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.45
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.39
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.35
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.35
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.3
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.28
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.14
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.12
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.98
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.56
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.47
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.23
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.22
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.07
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.06
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.05
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.94
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.94
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.9
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.9
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.76
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.7
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.65
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.63
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.59
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.58
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.48
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.48
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.44
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.41
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.38
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.38
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.33
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.32
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.31
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.3
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.26
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.24
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.23
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.23
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.19
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.12
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.08
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.07
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.06
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.05
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.04
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.03
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.0
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.97
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.96
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.92
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.91
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.8
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.72
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.68
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.66
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.58
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.47
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.45
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.43
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.41
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.41
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.39
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.38
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.37
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.35
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.31
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	96.3
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.29
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	96.25
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.25
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.21
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.21
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.19
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.18
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.17
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.1
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.08
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.0
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.98
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.92
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.91
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.89
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.88
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.83
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.79
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.76
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.66
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.53
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.47
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.44
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.38
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.38
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.36
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.31
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.27
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.23
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.17
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.12
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.07
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	95.06
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.05
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.97
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.9
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.82
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.75
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.59
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.52
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.37
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.14
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.98
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.84
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.75
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	93.54
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.46
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.36
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.31
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.28
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.27
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.26
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	93.25
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.22
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.04
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.02
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.81
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.78
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	92.57
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.51
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	92.41
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.37
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.35
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.32
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.31
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	92.3
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.18
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.16
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.87
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.72
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.7
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.64
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.33
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	91.26
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.99
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.89
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.76
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	90.71
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	90.7
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.67
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.67
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.59
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.42
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	90.31
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	90.03
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.93
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	89.86
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	89.8
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	89.77
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	89.74
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	89.4
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	89.29
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	89.13
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	89.07
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	88.95
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.76
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.65
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	88.58
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	88.55
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.54
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.54
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	88.52
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	88.46
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.3
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.08
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.56
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.54
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	87.2
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.08
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.05
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.01
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	86.81
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	86.35
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	86.13
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	86.0
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	85.93
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	85.74
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.48
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	85.36
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	85.28
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.24
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	85.22
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	85.22
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	85.09
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	85.06
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.19
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	84.17
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	84.09
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	84.03
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.8
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	83.74
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	83.59
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.4
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	83.38
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	83.19
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	83.02
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	82.81
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	82.78
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.74
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	82.51
d1qh8b_	519	Nitrogenase iron-molybdenum protein, beta chain {K	82.14
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	81.9
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.82
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	81.46
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	81.37
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	81.33
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	81.21
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	81.2
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.15
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	80.63
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	80.33
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	80.07
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.04
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	80.03

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.6e-50  Score=334.54  Aligned_cols=225  Identities=29%  Similarity=0.504  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++.+    .+.++.++++|+++++++++++
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~~~~~~~~l~~----~g~~~~~~~~Dvs~~~~~~~~~   79 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN---ADAANHVVDEIQQ----LGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHH----cCCcEEEEEccCCCHHHHHHHH
Confidence            56899999999999999999999999999999999997   4455555666655    5678999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+.. ..++ +.+.++|++++++|+.++++++++++|+|++  +++||++||.++..+.++  
T Consensus        80 ~~~~~~~g~iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~  157 (255)
T d1fmca_          80 DFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMT  157 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCH
T ss_pred             HHHHHHcCCCCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccc
Confidence            999999999999999999864 3455 7899999999999999999999999999976  578999999988877665  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  ++++|.|++++|||||+|+||+|+|++......++..+.+.+.+|++|+.+|+|||++++||+|+. +
T Consensus       158 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~-s  236 (255)
T d1fmca_         158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA-A  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGG-G
T ss_pred             cchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch-h
Confidence                        799999999999999999999999999877777888888888999999999999999999999998 9


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++|||+|.+|
T Consensus       237 ~~itG~~i~vD  247 (255)
T d1fmca_         237 SWVSGQILTVS  247 (255)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCEEEEC
Confidence            99999999998

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2e-49  Score=333.27  Aligned_cols=227  Identities=28%  Similarity=0.389  Sum_probs=172.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+   .+.+.+..+++..    ...++.++.+|++++++++++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~---~~~l~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~   75 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN---EYELNECLSKWQK----KGFQVTGSVCDASLRPEREKL   75 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCceEEEeccCCCHHHHHHH
Confidence            468999999999999999999999999999999999998   4445555555554    567899999999999999999


Q ss_pred             HHHHHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+++ |.+|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+.+.
T Consensus        76 ~~~~~~~~~g~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~  154 (259)
T d1xq1a_          76 MQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV  154 (259)
T ss_dssp             HHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------
T ss_pred             HHHHHHHhCCCcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccc
Confidence            99999998 68999999999855 578999999999999999999999999999999965  589999999988777655


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                    ++++|.|++++|||||+|+||+|+|+|......++..+.+...+|++|+.+|+|||++++||+|+.
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  234 (259)
T d1xq1a_         155 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA  234 (259)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGG
T ss_pred             cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence                          799999999999999999999999999877666666777788899999999999999999999998


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++|||+|.+|
T Consensus       235 -s~~iTG~~i~vD  246 (259)
T d1xq1a_         235 -ASYITGQTICVD  246 (259)
T ss_dssp             -GTTCCSCEEECC
T ss_pred             -hcCCcCcEEEeC
Confidence             999999999998

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.3e-49  Score=334.20  Aligned_cols=228  Identities=29%  Similarity=0.471  Sum_probs=200.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+   .+.+..+++.+..  .+.++.++.+|++++++++++++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~---~l~~~~~~~~~~~--~~~~~~~~~~Dvt~~~~v~~~~~   75 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSE---GLEASKAAVLETA--PDAEVLTTVADVSDEAQVEAYVT   75 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHHC--TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHhhC--CCCeEEEEeccCCCHHHHHHHHH
Confidence            589999999999999999999999999999999999844   4444444444321  45678899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+++|++|+||||||+.....++.+.+.++|+++|++|+.++++++++++|.|++  .|+||++||.++..+.+.   
T Consensus        76 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~  155 (258)
T d1iy8a_          76 ATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSG  155 (258)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHH
T ss_pred             HHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchH
Confidence            999999999999999998666678999999999999999999999999999999964  689999999998877665   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-------CCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-------FSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                 +++||.|++++|||||+|+||+++|+|....       ...+..+.+.+.+|++|+.+|+|||+.++||
T Consensus       156 Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL  235 (258)
T d1iy8a_         156 YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFL  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence                       7999999999999999999999999975321       1234456677889999999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +|+. +.++|||+|.+|
T Consensus       236 ~S~~-s~~itG~~i~VD  251 (258)
T d1iy8a_         236 LSDD-ASYVNATVVPID  251 (258)
T ss_dssp             TSGG-GTTCCSCEEEES
T ss_pred             hCch-hcCCcCceEEcC
Confidence            9998 999999999998

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.8e-49  Score=331.09  Aligned_cols=226  Identities=30%  Similarity=0.409  Sum_probs=200.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++.+    .+.++.++.+|++++++++++
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~---~~~l~~~~~~l~~----~g~~~~~~~~Dvt~~~~v~~~   77 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT---QKSCDSVVDEIKS----FGYESSGYAGDVSKKEEISEV   77 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS---HHHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            478999999999999999999999999999999999997   4455555555654    567889999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      ++++.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||.++..+.+. 
T Consensus        78 ~~~~~~~~g~iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~  156 (251)
T d2c07a1          78 INKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ  156 (251)
T ss_dssp             HHHHHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC
T ss_pred             HHHHHHhcCCceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCC
Confidence            9999999999999999999854 578899999999999999999999999999999965  589999999988777655 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                   ++++|.|++++|||||+|+||+|+|+|... ..++..+.+...+|++|+.+|+|||++++||+|+. 
T Consensus       157 ~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~-  234 (251)
T d2c07a1         157 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDK-  234 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch-
Confidence                         799999999999999999999999999855 45677778888999999999999999999999998 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.++|||+|.+|
T Consensus       235 s~~itG~~i~vD  246 (251)
T d2c07a1         235 SGYINGRVFVID  246 (251)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hCCCcCcEEEEC
Confidence            999999999998

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.8e-49  Score=330.16  Aligned_cols=227  Identities=30%  Similarity=0.504  Sum_probs=199.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+   ++.+..+++.+.   .+.++.++.+|+++++++++++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~---~~~~~~~~l~~~---~g~~~~~~~~Dv~~~~~v~~~~   74 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLE---EASEAAQKLTEK---YGVETMAFRCDVSNYEEVKKLL   74 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHHHHH---hCCcEEEEEccCCCHHHHHHHH
Confidence            4799999999999999999999999999999999999844   444444444331   4677889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCC-ccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEP-LWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~-~~~~~~-  193 (272)
                      +++.+++|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|+|++  .|+||+++|..+ ..+.+. 
T Consensus        75 ~~~~~~~g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~  153 (251)
T d1vl8a_          75 EAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI  153 (251)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSC
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccc
Confidence            99999999999999999985 4589999999999999999999999999999999966  589999999654 333332 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   ++++|.|++++|||||+|+||+++|+|..... .++..+.+.+.+|++|+.+|+|||++++||+|+.
T Consensus       154 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  233 (251)
T d1vl8a_         154 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence                         79999999999999999999999999975433 3455677788899999999999999999999998


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++|||+|.+|
T Consensus       234 -a~~itG~~i~vD  245 (251)
T d1vl8a_         234 -AKYVTGQIIFVD  245 (251)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -hCCCcCcEEEeC
Confidence             999999999998

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=7.3e-49  Score=327.79  Aligned_cols=224  Identities=29%  Similarity=0.445  Sum_probs=186.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|++.+  ....   .+.+    .+.++.++.+|+++++++++++
T Consensus         1 qrL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~---~~~~----~g~~~~~~~~Dvs~~~~v~~~~   71 (247)
T d2ew8a1           1 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEA---AIRN----LGRRVLTVKCDVSQPGDVEAFG   71 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHH---HHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHH---HHHH----cCCcEEEEEeeCCCHHHHHHHH
Confidence            36999999999999999999999999999999999997543  2222   2222    5778999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+. ...++.+.+.++|+++|++|+.++++++++++|+|++  .|+||++||.++..+.+.  
T Consensus        72 ~~~~~~~G~iDilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~  150 (247)
T d2ew8a1          72 KQVISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYT  150 (247)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCH
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccc
Confidence            99999999999999999995 4589999999999999999999999999999999965  589999999988877665  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhh-ccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQF-GSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                                  ++++|.|++++|||||+|+||+++|++......++..+.. ....|++|+.+|+|||+.++||+|+. 
T Consensus       151 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~-  229 (247)
T d2ew8a1         151 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD-  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGG-
T ss_pred             cchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCch-
Confidence                        7999999999999999999999999998665444333332 33468899999999999999999998 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.|+|||+|.+|
T Consensus       230 s~~itG~~i~vD  241 (247)
T d2ew8a1         230 ASFITGQTLAVD  241 (247)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hcCCcCCeEEEC
Confidence            999999999998

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=4.3e-49  Score=331.69  Aligned_cols=227  Identities=30%  Similarity=0.400  Sum_probs=200.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.   +.+.+..+++.+    .+.++.++.+|+++++++++++
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~---~~l~~~~~~~~~----~g~~~~~~~~Dv~~~~~v~~~~   73 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR---EALEKAEASVRE----KGVEARSYVCDVTSEEAVIGTV   73 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHT----TTSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHH
Confidence            369999999999999999999999999999999999984   445555555544    5678999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||.++..+.+.  
T Consensus        74 ~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~  153 (260)
T d1zema1          74 DSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMA  153 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBH
T ss_pred             HHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchH
Confidence            9999999999999999998666678999999999999999999999999999999854  689999999988777665  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCC---------------CCCHHHHHhhccCCCCCCCCCcc
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS---------------SFSEEESAQFGSEVPMKRAGQPI  246 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~  246 (272)
                                  ++++|.|++++|||||+|+||+|+|++...               ..+++..+.+...+|++|+.+|+
T Consensus       154 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  233 (260)
T d1zema1         154 AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHH
Confidence                        799999999999999999999999987421               11234456677889999999999


Q ss_pred             chhhhhhhhhccCCCCcccceeeccC
Q 039897          247 EVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       247 dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      |||++++||+|+. +.++|||+|.+|
T Consensus       234 dvA~~v~fL~S~~-s~~itG~~i~VD  258 (260)
T d1zema1         234 EIPGVVAFLLGDD-SSFMTGVNLPIA  258 (260)
T ss_dssp             GSHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHHHHhCch-hcCccCCeEEeC
Confidence            9999999999998 999999999998

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=7e-49  Score=328.67  Aligned_cols=224  Identities=32%  Similarity=0.472  Sum_probs=200.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.   +.+++..+++.     ...++.++.+|++++++++++++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~---~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~   74 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS---DVGEKAAKSVG-----TPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHC-----CTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHhC-----CCCcEEEEEccCCCHHHHHHHHH
Confidence            59999999999999999999999999999999999984   34444444442     45678999999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC---CeEEEecCCCCccCChh--
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG---SAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---g~iv~vsS~~~~~~~~~--  193 (272)
                      ++.+++|++|+||||||+.. ..++.+.+.++|+++|++|+.++++++++++|+|++.   ++||++||.++..+.+.  
T Consensus        75 ~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~  153 (251)
T d1zk4a1          75 ATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLG  153 (251)
T ss_dssp             HHHHHHSSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHhCCceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCch
Confidence            99999999999999999954 5799999999999999999999999999999999763   58999999988877665  


Q ss_pred             ------------HHHHHHH--HhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ------------ARGLALQ--LVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ------------~~~la~e--~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                  ++++|.|  ++++|||||+|+||+|+|+|.......+........+|++|+.+|+|||++++||+|+.
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  233 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence                        6899988  45889999999999999999877666677777778899999999999999999999998


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++|||+|.+|
T Consensus       234 -s~~itG~~i~vD  245 (251)
T d1zk4a1         234 -SKFATGSEFVVD  245 (251)
T ss_dssp             -GTTCCSCEEEES
T ss_pred             -hCCCcCcEEEEC
Confidence             999999999998

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-49  Score=330.34  Aligned_cols=221  Identities=33%  Similarity=0.472  Sum_probs=197.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+   .+++..+++       +.+..++.+|++++++++++++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~---~l~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~   70 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSEN---GAQAISDYL-------GANGKGLMLNVTDPASIESVLE   70 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHh-------CCCCcEEEEEecCHHHhhhhhh
Confidence            689999999999999999999999999999999999844   344444443       3356789999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|++  +|+||++||.++..+.+.   
T Consensus        71 ~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~  149 (243)
T d1q7ba_          71 KIRAEFGEVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQAN  149 (243)
T ss_dssp             HHHHHTCSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             hhhcccCCcceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHH
Confidence            99999999999999999854 578999999999999999999999999999999965  589999999988776655   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                                 ++++|.|++++|||||+|+||+++|+|.... .++..+.+.+.+|++|+.+|+|||+.++||+|+. +.
T Consensus       150 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~-s~  227 (243)
T d1q7ba_         150 YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDE-AA  227 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG-GT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh-hhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch-hc
Confidence                       7999999999999999999999999987553 4556667788899999999999999999999998 99


Q ss_pred             cccceeeccC
Q 039897          263 YITGQVLHPN  272 (272)
Q Consensus       263 ~~tG~~i~id  272 (272)
                      ++|||+|.+|
T Consensus       228 ~itGq~i~vd  237 (243)
T d1q7ba_         228 YITGETLHVN  237 (243)
T ss_dssp             TCCSCEEEES
T ss_pred             CCcCCeEEEC
Confidence            9999999998

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6.4e-49  Score=330.47  Aligned_cols=228  Identities=30%  Similarity=0.537  Sum_probs=201.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      -.+|+||++|||||++|||+++|++|+++|++|++++|+.+  +.+++..+++.+    .+.++.++++|++++++++++
T Consensus         2 ~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~--~~~~~~~~~~~~----~g~~~~~~~~Dvt~~~~v~~~   75 (261)
T d1geea_           2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE--DEANSVLEEIKK----VGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHHH----TTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcH--HHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHH
Confidence            35799999999999999999999999999999999999743  234445555554    567889999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++   ++.|+++||.++..+.+.
T Consensus        76 ~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~  154 (261)
T d1geea_          76 VQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL  154 (261)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHhCCCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc
Confidence            9999999999999999999955 478999999999999999999999999999999955   345999999988877665


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    +++||.|++++|||||+|+||+|+|++..... .++..+.+.+.+|++|+.+|+|||++++||+|+
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~  234 (261)
T d1geea_         155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS  234 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence                          79999999999999999999999999875432 345566778889999999999999999999999


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.++|||+|.+|
T Consensus       235 ~-s~~itG~~i~vD  247 (261)
T d1geea_         235 E-ASYVTGITLFAD  247 (261)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             h-hcCCcCCeEEEC
Confidence            8 999999999998

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1e-48  Score=329.08  Aligned_cols=226  Identities=27%  Similarity=0.401  Sum_probs=200.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+   .+.+.+..+++..    .+.++.++.+|+++++++++++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~~~----~g~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRS----KGFKVEASVCDLSSRSERQELM   76 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCCceEEEeeCCCHHHHHHHH
Confidence            67999999999999999999999999999999999997   4455555666654    5677889999999999999999


Q ss_pred             HHHHHhcC-CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYG-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g-~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.++++ ++|+||||||+.. ..++.+.+.++|+++|++|+.+++++++.++|+|++  .|+||+++|..+..+.+. 
T Consensus        77 ~~~~~~~~~~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~  155 (259)
T d2ae2a_          77 NTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE  155 (259)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCCceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccc
Confidence            99999987 7999999999854 578999999999999999999999999999999965  589999999988877765 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC----HHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS----EEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                                   ++++|.|++++|||||+|+||+|+|++......    .+..+++.+.+|++|+.+|+|||++++||+
T Consensus       156 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~  235 (259)
T d2ae2a_         156 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence                         799999999999999999999999998643322    233455677899999999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      |+. +.++|||+|.+|
T Consensus       236 S~~-s~~itG~~i~VD  250 (259)
T d2ae2a_         236 FPA-ASYVTGQIIYVD  250 (259)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Cch-hCCCcCcEEEEC
Confidence            998 999999999998

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.3e-48  Score=328.83  Aligned_cols=226  Identities=30%  Similarity=0.429  Sum_probs=191.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |+||++|||||++|||+++|++|+++|++|++++|+..  +.+++..+++.+.   .+.++.++.+|+++++++++++++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~--~~~~~~~~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~   76 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA--AEIEKVRAGLAAQ---HGVKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCH--HHHHHHHHHHHHH---HTSCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcH--HHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHH
Confidence            78999999999999999999999999999999999743  2333333333321   466889999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.+++|++|+||||||+.. ..++.+.+.++|+++|++|+.++++++++++|+|++  .|+||+++|.++..+.+.    
T Consensus        77 ~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y  155 (260)
T d1x1ta1          77 AVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAY  155 (260)
T ss_dssp             HHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHHhCCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchh
Confidence            9999999999999999854 578999999999999999999999999999999976  589999999998887766    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-----------HHHHhhccCCCCCCCCCccchhhhh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-----------EESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                                ++++|.|++++|||||+|+||+|+|+|.......           ...+.+.+.+|++|+.+|+|||+++
T Consensus       156 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v  235 (260)
T d1x1ta1         156 VAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHH
T ss_pred             hhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                      7999999999999999999999999987543321           1123356678999999999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+|+. +.++|||+|.+|
T Consensus       236 ~fL~S~~-a~~itG~~i~vD  254 (260)
T d1x1ta1         236 VFLASDA-AAQITGTTVSVD  254 (260)
T ss_dssp             HHHHSGG-GTTCCSCEEEES
T ss_pred             HHHhChh-hCCCcCCEEEEC
Confidence            9999998 999999999998

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=3.9e-48  Score=325.42  Aligned_cols=223  Identities=32%  Similarity=0.398  Sum_probs=198.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .||++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++.+    .+.++.++++|++++++++++++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~l~~~~~~l~~----~g~~~~~~~~Dvs~~~~v~~~~~~~   73 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG---EEGLRTTLKELRE----AGVEADGRTCDVRSVPEIEALVAAV   73 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEeecCCHHHHHHHHHHH
Confidence            48999999999999999999999999999999998   4555556666654    5678999999999999999999999


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc--cc--CCeEEEecCCCCccCChh---
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM--NE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~--~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      .+++|++|+||||||+.. ..++.+.+.++|+++|++|+.++++++++++|+|  ++  .++||+++|..+..+.+.   
T Consensus        74 ~~~~g~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~  152 (257)
T d2rhca1          74 VERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP  152 (257)
T ss_dssp             HHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhCCCCEEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchh
Confidence            999999999999999854 5789999999999999999999999999999975  22  479999999988877765   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCC----------CCCHHHHHhhccCCCCCCCCCccchhhhh
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPS----------SFSEEESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                                 +++||.|++++|||||+|+||+|+|+|...          ...++..+.+...+|++|+.+|+|||+.+
T Consensus       153 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v  232 (257)
T d2rhca1         153 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMV  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                       799999999999999999999999998532          22345567778899999999999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+|+. +.++|||+|.+|
T Consensus       233 ~fL~S~~-s~~itG~~i~vD  251 (257)
T d2rhca1         233 AYLIGPG-AAAVTAQALNVC  251 (257)
T ss_dssp             HHHTSGG-GTTCCSCEEEES
T ss_pred             HHHhCch-hcCCcCceEEEC
Confidence            9999998 999999999998

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.1e-48  Score=321.10  Aligned_cols=217  Identities=32%  Similarity=0.475  Sum_probs=193.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.   +++++..+++       ..++.++++|+++++++++++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~   71 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD---EEGKAMAAEL-------ADAARYVHLDVTQPAQWKAAV   71 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHT-------GGGEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh-------hCcceEEEeecCCHHHHHHHH
Confidence            579999999999999999999999999999999999984   3444444433       346788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+.. ..++.+.+.++|+++|++|+.+++++++++.|.|++  .|+||++||.++..+.+.  
T Consensus        72 ~~~~~~~g~idilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~  150 (244)
T d1nffa_          72 DTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACH  150 (244)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHhCCCeEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccccc
Confidence            999999999999999999854 578999999999999999999999999999999966  589999999998877765  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  ++++|.||+++|||||+|+||+++|+|.....      ....+.|++|+.+|+|||++++||+|+. +
T Consensus       151 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~------~~~~~~pl~R~~~p~diA~~v~fL~s~~-s  223 (244)
T d1nffa_         151 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP------EDIFQTALGRAAEPVEVSNLVVYLASDE-S  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC------TTCSCCSSSSCBCHHHHHHHHHHHHSGG-G
T ss_pred             chhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh------HHHHhccccCCCCHHHHHHHHHHHhChh-h
Confidence                        79999999999999999999999999864321      2245689999999999999999999998 9


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++|||+|.+|
T Consensus       224 ~~itG~~i~vD  234 (244)
T d1nffa_         224 SYSTGAEFVVD  234 (244)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCCcCCEEEEC
Confidence            99999999998

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=5e-48  Score=324.43  Aligned_cols=223  Identities=33%  Similarity=0.481  Sum_probs=196.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+   .+.+++..+++       +.++.++.+|+++++++++++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~---~~~l~~~~~~~-------~~~~~~~~~Dvt~~~~v~~~~   70 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADIN---LEAARATAAEI-------GPAACAIALDVTDQASIDRCV   70 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC---HHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHh-------CCceEEEEeeCCCHHHHHHHH
Confidence            45999999999999999999999999999999999997   34444444443       567889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc-cc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM-NE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.| ++  +|+||++||.++..+.+. 
T Consensus        71 ~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  149 (256)
T d1k2wa_          71 AELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV  149 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCccEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccc
Confidence            999999999999999999854 5799999999999999999999999999999876 32  589999999998877765 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----------CCHHHHHhhccCCCCCCCCCccchhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----------FSEEESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                                   ++++|.||+++|||||+|+||+++|++....          ...+..+.+...+|++|+.+|+|||+
T Consensus       150 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~  229 (256)
T d1k2wa_         150 GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTG  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred             cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                         7999999999999999999999999986321          12344556677899999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+|+. +.++|||+|.+|
T Consensus       230 ~v~fL~S~~-a~~iTG~~i~vD  250 (256)
T d1k2wa_         230 MAIFLATPE-ADYIVAQTYNVD  250 (256)
T ss_dssp             HHHHTTSGG-GTTCCSCEEEES
T ss_pred             HHHHHhCch-hCCccCceEEEC
Confidence            999999998 999999999998

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.2e-47  Score=317.69  Aligned_cols=219  Identities=32%  Similarity=0.425  Sum_probs=192.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+   .+++..+         ..+..++.+|+++++++++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~---~l~~~~~---------~~~~~~~~~Dv~~~~~v~~~~   68 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEG---PLREAAE---------AVGAHPVVMDVADPASVERGF   68 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHH---------TTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHH---------HcCCeEEEEecCCHHHHHHHH
Confidence            4689999999999999999999999999999999999843   3333332         234678999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++  +.|+++||. +..+.+.  
T Consensus        69 ~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~  146 (242)
T d1ulsa_          69 AEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQA  146 (242)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCH
T ss_pred             HHHHHhcCCceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCc
Confidence            999999999999999999854 5789999999999999999999999999999999763  556666664 4444443  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  ++++|.||+++|||||+|+||+|+|++... ..++..+.+...+|++|+.+|+|||++++||+|+. +
T Consensus       147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~-s  224 (242)
T d1ulsa_         147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE-S  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG-G
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc-CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchh-h
Confidence                        799999999999999999999999999854 46667778888999999999999999999999998 9


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++|||+|.+|
T Consensus       225 ~~itG~~i~vD  235 (242)
T d1ulsa_         225 SFITGQVLFVD  235 (242)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCCCCcEEEEC
Confidence            99999999998

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.9e-48  Score=322.73  Aligned_cols=220  Identities=36%  Similarity=0.540  Sum_probs=191.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+.+..    +..+++         +..++++|+++++++++++
T Consensus         1 g~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~----~~~~~~---------~~~~~~~Dv~~~~~v~~~~   67 (248)
T d2d1ya1           1 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK----EVAEAI---------GGAFFQVDLEDERERVRFV   67 (248)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH----HHHHHH---------TCEEEECCTTCHHHHHHHH
T ss_pred             CccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHc---------CCeEEEEeCCCHHHHHHHH
Confidence            368999999999999999999999999999999999985432    222221         2467899999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+.. ..++.+.+.++|+++|++|+.++++++++++|+|++  .|+||+++|.++..+.+.  
T Consensus        68 ~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~  146 (248)
T d2d1ya1          68 EEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENA  146 (248)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBH
T ss_pred             HHHHHhcCCCCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccc
Confidence            999999999999999999865 478999999999999999999999999999999976  589999999998887765  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCC-----CCHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS-----FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                                  ++++|.|++++|||||+|+||+++|++....     .+++..+.+.+..|++|+.+|+|||+.++||+
T Consensus       147 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~  226 (248)
T d2d1ya1         147 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence                        7999999999999999999999999875321     12233445677899999999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      |+. +.++|||+|.+|
T Consensus       227 S~~-s~~itG~~i~vD  241 (248)
T d2d1ya1         227 SEK-ASFITGAILPVD  241 (248)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Cch-hcCCCCcEEEcC
Confidence            998 999999999998

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6e-48  Score=320.08  Aligned_cols=214  Identities=31%  Similarity=0.436  Sum_probs=187.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+...                  ..++..+++|+++++++++++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------------------~~~~~~~~~Dv~~~~~v~~~~   64 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------------------PKGLFGVEVDVTDSDAVDRAF   64 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------------------CTTSEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------------------hcCceEEEEecCCHHHHHHHH
Confidence            35899999999999999999999999999999999998533                  445788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.++..+.+.  
T Consensus        65 ~~~~~~~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~  143 (237)
T d1uzma1          65 TAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQA  143 (237)
T ss_dssp             HHHHHHHSSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCH
T ss_pred             HHHHHhcCCceEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccH
Confidence            999999999999999999854 578999999999999999999999999999999966  479999999998877655  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCC
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  261 (272)
                                  ++++|.|++++|||||+|+||+++|+|... ..++..+...+.+|++|+.+|+|+|++++||+|++ +
T Consensus       144 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~-s  221 (237)
T d1uzma1         144 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFIPAKRVGTPAEVAGVVSFLASED-A  221 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGG-G
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch-h
Confidence                        799999999999999999999999998744 35666677888999999999999999999999998 9


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++|||+|.+|
T Consensus       222 ~~itG~~i~vd  232 (237)
T d1uzma1         222 SYISGAVIPVD  232 (237)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCeEEEC
Confidence            99999999998

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-48  Score=323.00  Aligned_cols=222  Identities=27%  Similarity=0.450  Sum_probs=192.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.+   .+++..++        ..++.++.+|+++++++++++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~---~~~~~~~~--------~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDES---GGRALEQE--------LPGAVFILCDVTQEDDVKTLV   70 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHH--------CTTEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHh--------cCCCeEEEccCCCHHHHHHHH
Confidence            4699999999999999999999999999999999999843   33333322        345788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~---  193 (272)
                      +++.+++|++|+||||||+.....++++.+.++|+++|++|+.++++++++++|+|++ +|+||++||.++..+.+.   
T Consensus        71 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~  150 (250)
T d1ydea1          71 SETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVP  150 (250)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcch
Confidence            9999999999999999998655677899999999999999999999999999999976 589999999987766655   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCC---CC--CHHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPS---SF--SEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                                 ++++|.|++++|||||+|+||+|+|+|...   ..  ..+..+......|++|+.+|+|+|++++||+|
T Consensus       151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~S  230 (250)
T d1ydea1         151 YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS  230 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             hHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence                       799999999999999999999999987532   11  12344555667899999999999999999998


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +  +.++|||+|.+|
T Consensus       231 d--a~~itG~~i~vD  243 (250)
T d1ydea1         231 E--ANFCTGIELLVT  243 (250)
T ss_dssp             H--CTTCCSCEEEES
T ss_pred             c--cCCCcCCeEEEC
Confidence            5  679999999998

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.4e-48  Score=325.47  Aligned_cols=221  Identities=29%  Similarity=0.398  Sum_probs=195.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.   +++.+..++       .+.++.++++|++++++++++++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~---~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~   71 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARE-------LGDAARYQHLDVTIEEDWQRVVA   71 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHT-------TGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHH-------hCCceEEEEcccCCHHHHHHHHH
Confidence            69999999999999999999999999999999999984   344443333       34568899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh---
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~---  193 (272)
                      ++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.++..+.+.   
T Consensus        72 ~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~  150 (254)
T d1hdca_          72 YAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSS  150 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHHcCCccEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhh
Confidence            99999999999999999954 578999999999999999999999999999999865  589999999998877765   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCC-CccchhhhhhhhhccCCC
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAG-QPIEVAPCYVFLACNHCS  261 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~L~s~~~~  261 (272)
                                 +++||.|++++|||||+|+||+|+|+|..... .+..+......|++|+. .|+|||++++||+|+. +
T Consensus       151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~-a  228 (254)
T d1hdca_         151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG-IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT-S  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT-CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG-G
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcC-HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchh-h
Confidence                       79999999999999999999999999864322 22334556778999996 6999999999999998 9


Q ss_pred             CcccceeeccC
Q 039897          262 SYITGQVLHPN  272 (272)
Q Consensus       262 ~~~tG~~i~id  272 (272)
                      .++|||+|.+|
T Consensus       229 ~~itG~~i~vD  239 (254)
T d1hdca_         229 SYVTGAELAVD  239 (254)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCCCCceEEeC
Confidence            99999999998

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.5e-47  Score=320.09  Aligned_cols=222  Identities=29%  Similarity=0.440  Sum_probs=195.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .|++|||||++|||+++|++|+++|++|++++|+.   +.+++..+++.+    .+.++.++++|++++++++++++++.
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~---~~l~~~~~~i~~----~g~~~~~~~~Dv~~~~~v~~~~~~~~   73 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYND---ATAKAVASEINQ----AGGHAVAVKVDVSDRDQVFAAVEQAR   73 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999984   455555566654    56789999999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh-----
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++   +++|+++||.++..+.+.     
T Consensus        74 ~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  152 (255)
T d1gega_          74 KTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYS  152 (255)
T ss_dssp             HHTTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHhCCccEEEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccch
Confidence            99999999999999854 579999999999999999999999999999998744   477999999988777665     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCC----------CCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSS----------FSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                               +++||.|++++|||||+|+||+++|++....          ...+....+.+.+|++|+.+|+|||+.++|
T Consensus       153 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~f  232 (255)
T d1gega_         153 SSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSY  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             hCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence                     7999999999999999999999999985321          112334556778999999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+. +.++|||+|.+|
T Consensus       233 L~S~~-a~~itG~~i~vD  249 (255)
T d1gega_         233 LASPD-SDYMTGQSLLID  249 (255)
T ss_dssp             HHSGG-GTTCCSCEEEES
T ss_pred             HhCch-hCCccCcEEEec
Confidence            99998 999999999998

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.1e-47  Score=320.04  Aligned_cols=221  Identities=28%  Similarity=0.428  Sum_probs=195.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++||||||++|||+++|++|+++|++|++++++.  .+.+++..+++..    .+.++.++++|++++++++++++++.+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~--~~~~~~~~~~~~~----~g~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS--AKAAEEVSKQIEA----YGGQAITFGGDVSKEADVEAMMKTAID   75 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHH----HTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHH----cCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999987643  2334444455544    466788999999999999999999999


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-------  193 (272)
                      ++|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|++  +|+||++||.++..+.++       
T Consensus        76 ~~g~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~as  154 (244)
T d1edoa_          76 AWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAA  154 (244)
T ss_dssp             HSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             HcCCCCcccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHH
Confidence            9999999999999855 579999999999999999999999999999999954  689999999988777665       


Q ss_pred             -------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhh-ccCCCCccc
Q 039897          194 -------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA-CNHCSSYIT  265 (272)
Q Consensus       194 -------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~~~~~~t  265 (272)
                             +++||.||+++|||||+|+||+++|+|... ..++..+.+...+|++|+.+|+|||+++.||+ |+. +.++|
T Consensus       155 Kaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~-a~~it  232 (244)
T d1edoa_         155 KAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPA-ASYIT  232 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSG-GGGCC
T ss_pred             HHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHH-hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCch-hcCCc
Confidence                   799999999999999999999999998754 45666777888999999999999999999997 777 99999


Q ss_pred             ceeeccC
Q 039897          266 GQVLHPN  272 (272)
Q Consensus       266 G~~i~id  272 (272)
                      ||+|.+|
T Consensus       233 G~~i~vd  239 (244)
T d1edoa_         233 GQAFTID  239 (244)
T ss_dssp             SCEEEES
T ss_pred             CCeEEeC
Confidence            9999998

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3.1e-47  Score=320.42  Aligned_cols=228  Identities=25%  Similarity=0.367  Sum_probs=197.7

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +.++|+||++|||||++|||+++|++|+++|++|++++|+..+..+.   .+++.+.   .+.++.++.+|+++++++++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~---~~~~~~~---~g~~~~~~~~Dv~~~~~v~~   76 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEV---TEKVGKE---FGVKTKAYQCDVSNTDIVTK   76 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHH---HHHHHHH---HTCCEEEEECCTTCHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHHHHH---hCCceEEEEccCCCHHHHHH
Confidence            34689999999999999999999999999999999999986554443   3333221   46778999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~  192 (272)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++++++++.|+|.+   ++.|++++|........
T Consensus        77 ~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~  155 (260)
T d1h5qa_          77 TIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ  155 (260)
T ss_dssp             HHHHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE
T ss_pred             HHHHHHHHhCCCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccc
Confidence            99999999999999999999854 578999999999999999999999999999999843   46788877765433211


Q ss_pred             -----------h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhh
Q 039897          193 -----------E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       193 -----------~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                 +          ++++|.||+++|||||+|+||+++|++... ..++..+.+.+.+|++|+.+|+|||++
T Consensus       156 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~R~g~pedvA~~  234 (260)
T d1h5qa_         156 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPLNRFAQPEEMTGQ  234 (260)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             cccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc-cCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                       0          799999999999999999999999999754 456777778889999999999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++||+|+. +.++|||+|.+|
T Consensus       235 v~fL~S~~-s~~itG~~i~VD  254 (260)
T d1h5qa_         235 AILLLSDH-ATYMTGGEYFID  254 (260)
T ss_dssp             HHHHHSGG-GTTCCSCEEEEC
T ss_pred             HHHHhcch-hCCCcCceEEEC
Confidence            99999998 999999999998

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.4e-46  Score=317.84  Aligned_cols=226  Identities=27%  Similarity=0.411  Sum_probs=193.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.   +.+++..+++.     ....+.++.+|+++++++++++
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~---~~~~~~~~~l~-----~~~~~~~~~~Dv~~~~~v~~~~   73 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD---DHGQKVCNNIG-----SPDVISFVHCDVTKDEDVRNLV   73 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHC-----CTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHhc-----CCCceEEEEccCCCHHHHHHHH
Confidence            469999999999999999999999999999999999984   44555555553     3556788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKA-GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+++|++|+||||||+.... ..+.+.+.++|++++++|+.++++++++++|+|++  .|+||+++|.++..+.+. 
T Consensus        74 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  153 (268)
T d2bgka1          74 DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV  153 (268)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS
T ss_pred             HHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc
Confidence            99999999999999999985432 35788999999999999999999999999999965  589999999876654332 


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHHHHh--hccCCCCCCCCCccchhhhhhhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEESAQ--FGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                    ++++|.||+++|||||+|+||+++|+|......  .+..+.  .....|.+|+.+|+|||++++||
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL  233 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL  233 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHH
T ss_pred             ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHH
Confidence                          799999999999999999999999999866543  222222  23346788999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +|++ +.++|||+|.+|
T Consensus       234 ~S~~-s~~itGq~i~VD  249 (268)
T d2bgka1         234 AGDE-SKYVSGLNLVID  249 (268)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             hChh-hCCccCceEEEC
Confidence            9998 999999999998

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.4e-46  Score=315.65  Aligned_cols=226  Identities=33%  Similarity=0.486  Sum_probs=196.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.   +.+.+..+++.+    .+..+.++.+|+++++++++++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~---~~l~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~   74 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE---KELDECLEIWRE----KGLNVEGSVCDLLSRTERDKLM   74 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHh----cCCCceEEEeecCCHHHHHHHH
Confidence            679999999999999999999999999999999999984   444555555554    5677889999999999999999


Q ss_pred             HHHHHhc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-  193 (272)
                      +++.+++ +.+|+||||||... ..++.+.+.++|++++++|+.+++++++++.|.|++  .|+||+++|.++..+.+. 
T Consensus        75 ~~~~~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~  153 (258)
T d1ae1a_          75 QTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV  153 (258)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCCcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccc
Confidence            9999998 57999999999955 579999999999999999999999999999999965  689999999998887765 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-----CHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-----SEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                                   ++.+|+|++++|||||+|+||+++|+|.....     ..+..+.+...+|++|+.+|+|||++++||
T Consensus       154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL  233 (258)
T d1ae1a_         154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFL  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence                         79999999999999999999999999875543     345566778889999999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +|++ +.++||++|.+|
T Consensus       234 ~S~~-s~~itG~~i~vD  249 (258)
T d1ae1a_         234 CFPA-ASYITGQIIWAD  249 (258)
T ss_dssp             HSGG-GTTCCSCEEEES
T ss_pred             hChh-hCCCcCcEEEeC
Confidence            9998 999999999998

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4.2e-47  Score=318.02  Aligned_cols=223  Identities=33%  Similarity=0.467  Sum_probs=194.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.   +.+++..+++       +.+..++++|+++++++++++
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~---~~~~~~~~~~-------~~~~~~~~~Dv~~~~~~~~~~   71 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE---AAGQQLAAEL-------GERSMFVRHDVSSEADWTLVM   71 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH---HHHHHHHHHH-------CTTEEEECCCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHh-------CCCeEEEEeecCCHHHHHHHH
Confidence            469999999999999999999999999999999999974   3444444433       456788999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~---  193 (272)
                      +++.+++|++|+||||||+.. ..++.+.+.++|+++|++|+.++++++++++|+|++ +|+||++||.++..+.+.   
T Consensus        72 ~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~  150 (253)
T d1hxha_          72 AAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAG  150 (253)
T ss_dssp             HHHHHHHCSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHHHhCCCCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcccccc
Confidence            999999999999999999865 478999999999999999999999999999999976 699999999998877665   


Q ss_pred             -----------HHHHHHHHhhC--CeEEEEEecccccCCCCCC----CCCHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          194 -----------ARGLALQLVER--GIRVNGVAPGPIWTPLIPS----SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       194 -----------~~~la~e~~~~--gi~vn~i~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                                 ++++|.|++++  |||||+|+||+|+|++...    ...++.........|++|+.+|+|||++++||+
T Consensus       151 Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~  230 (253)
T d1hxha_         151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA  230 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHh
Confidence                       78999999984  5999999999999987533    223344444455667889999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      |+. +.++|||+|++|
T Consensus       231 S~~-s~~itG~~i~VD  245 (253)
T d1hxha_         231 SDE-SSVMSGSELHAD  245 (253)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Chh-hCCCcCcEEEEC
Confidence            998 999999999998

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-46  Score=319.76  Aligned_cols=234  Identities=28%  Similarity=0.443  Sum_probs=201.4

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhh-hcCCCCceEEeccCCChH
Q 039897           33 DYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAK-TSDAKDPMAISADLGFDE  111 (272)
Q Consensus        33 ~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~  111 (272)
                      +|+....|+||++|||||++|||+++|++|+++|++|++++|+   .+.+.+..+++.... ...+.++.++.+|+++++
T Consensus         3 ~y~~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~---~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~   79 (297)
T d1yxma1           3 SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK---LERLKSAADELQANLPPTKQARVIPIQCNIRNEE   79 (297)
T ss_dssp             CSBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred             CCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHHHhhhccccCceEEEEeccCCCHH
Confidence            5677788999999999999999999999999999999999998   445555555655422 123668899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc
Q 039897          112 NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW  189 (272)
Q Consensus       112 ~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~  189 (272)
                      +++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++|+. ...
T Consensus        80 ~v~~~~~~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~  157 (297)
T d1yxma1          80 EVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKA  157 (297)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTT
T ss_pred             HHHHHHHHHHHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccc
Confidence            999999999999999999999999854 578999999999999999999999999999999966  5788888664 333


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC---HHHHHhhccCCCCCCCCCccchhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS---EEESAQFGSEVPMKRAGQPIEVAPCY  252 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~  252 (272)
                      ..+.              ++++|.|++++|||||+|+||+|+|++......   ++..+.....+|++|+.+|+|||+++
T Consensus       158 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v  237 (297)
T d1yxma1         158 GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVV  237 (297)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHH
T ss_pred             cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            3333              799999999999999999999999998755443   33445667789999999999999999


Q ss_pred             hhhhccCCCCcccceeeccC
Q 039897          253 VFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       253 ~~L~s~~~~~~~tG~~i~id  272 (272)
                      +||+|+. +.++|||+|.+|
T Consensus       238 ~fL~Sd~-s~~iTG~~i~VD  256 (297)
T d1yxma1         238 CFLLSPA-ASFITGQSVDVD  256 (297)
T ss_dssp             HHHHSGG-GTTCCSCEEEES
T ss_pred             HHHhCch-hcCcCCcEEEeC
Confidence            9999998 999999999998

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=3e-46  Score=310.77  Aligned_cols=221  Identities=33%  Similarity=0.452  Sum_probs=193.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.   +++.+..++       .+.++.++++|+++++++++++
T Consensus         1 g~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~-------~~~~~~~~~~Dls~~~~i~~~~   70 (241)
T d2a4ka1           1 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE---RLLAEAVAA-------LEAEAIAVVADVSDPKAVEAVF   70 (241)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHT-------CCSSEEEEECCTTSHHHHHHHH
T ss_pred             CcCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHH-------cCCceEEEEecCCCHHHHHHHH
Confidence            369999999999999999999999999999999999984   333333322       4678899999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  193 (272)
                      +++.+++|++|++|||||... ..++.+.+.++|++++++|+.+++++++.++|+|++++.|+++||.+.... +.    
T Consensus        71 ~~i~~~~g~iDiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-~~~~~Y  148 (241)
T d2a4ka1          71 AEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-FGLAHY  148 (241)
T ss_dssp             HHHHHHHSCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-HHHHHH
T ss_pred             HHHHHHhCCccEecccccccc-ccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-cCcccc
Confidence            999999999999999999854 588999999999999999999999999999999998888888877665433 33    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                ++++|.|++++|||||+|+||+++|++.. ..+++..+.+.+..|++|+.+|+|||++++||+|+. +.+
T Consensus       149 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~-~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~-s~~  226 (241)
T d2a4ka1         149 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA-GLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE-SAY  226 (241)
T ss_dssp             HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT-TSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG-GTT
T ss_pred             chhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH-hhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcch-hCC
Confidence                      89999999999999999999999999874 456777788888999999999999999999999998 999


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      +||++|.+|
T Consensus       227 itG~~i~vD  235 (241)
T d2a4ka1         227 ITGQALYVD  235 (241)
T ss_dssp             CCSCEEEES
T ss_pred             CcCceEEeC
Confidence            999999998

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.2e-46  Score=317.41  Aligned_cols=230  Identities=30%  Similarity=0.444  Sum_probs=185.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.   +.+.+..+++..... ...++.++.+|++++++++++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~---~~l~~~~~~l~~~~~-~~~~~~~~~~Dvt~~~~v~~~~~   77 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHA---ERLEETRQQILAAGV-SEQNVNSVVADVTTDAGQDEILS   77 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCC-CcCceEEEEccCCCHHHHHHHHH
Confidence            58999999999999999999999999999999999984   445555555554221 23468899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCC-CccCChh
Q 039897          119 EVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVE-PLWHSPE  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~-~~~~~~~  193 (272)
                      ++.+++|++|+||||||+...   ..++.+.+.++|+++|++|+.++++++++++|+|++ +|.+|+++|.. +..+.+.
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~  157 (264)
T d1spxa_          78 TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD  157 (264)
T ss_dssp             HHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT
T ss_pred             HHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCC
Confidence            999999999999999998532   245677899999999999999999999999999976 47777777765 4556554


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--------HHHHHhhccCCCCCCCCCccchhhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--------EEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                    +++||.|++++|||||+|+||+|+|+|......        .+....+.+.+|++|+.+|+|||++
T Consensus       158 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~  237 (264)
T d1spxa_         158 FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEV  237 (264)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHH
T ss_pred             chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                          799999999999999999999999998754321        1223455677999999999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++||+|++.+.|+|||+|.+|
T Consensus       238 v~fL~S~~~s~~itG~~i~vD  258 (264)
T d1spxa_         238 IAFLADRKTSSYIIGHQLVVD  258 (264)
T ss_dssp             HHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHhCCcccCCccCceEEeC
Confidence            999998532789999999998

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=313.15  Aligned_cols=220  Identities=26%  Similarity=0.350  Sum_probs=191.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      |...|+||++|||||++|||+++|++|+++|++|++++|+.+   ++.+..++        ..++..+.+|++|++++++
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~---~l~~~~~~--------~~~~~~~~~Dv~d~~~v~~   69 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA---DLDSLVRE--------CPGIEPVCVDLGDWEATER   69 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHH--------STTCEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH---HHHHHHHh--------cCCCeEEEEeCCCHHHHHH
Confidence            456799999999999999999999999999999999999843   33333332        2357889999999998877


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc-cc--CCeEEEecCCCCccCCh
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM-NE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~--~g~iv~vsS~~~~~~~~  192 (272)
                      +++    ++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.| ++  .|+||+++|.++..+.+
T Consensus        70 ~~~----~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~  144 (244)
T d1pr9a_          70 ALG----SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT  144 (244)
T ss_dssp             HHT----TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred             HHH----HhCCceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc
Confidence            664    5799999999999954 5799999999999999999999999999999965 33  58999999998887776


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-HHHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-EEESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              ++++|.||+++|||||+|+||+|+|++...... .+..+.+.+.+|++|+.+|+|||+.++||+|
T Consensus       145 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S  224 (244)
T d1pr9a_         145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLS  224 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred             chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            5              799999999999999999999999998755443 4556677888999999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++|||+|.+|
T Consensus       225 ~~-a~~itG~~i~vD  238 (244)
T d1pr9a_         225 DR-SGMTTGSTLPVE  238 (244)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             ch-hCCcCCcEEEEC
Confidence            98 999999999998

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=9.8e-47  Score=319.29  Aligned_cols=231  Identities=28%  Similarity=0.416  Sum_probs=190.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.   +.+++..+++.+... ...++.++.+|+++++++++++
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~---~~l~~~~~~l~~~~~-~~~~~~~~~~Dvs~~~~v~~~~   76 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSS---ERLEETRQIILKSGV-SEKQVNSVVADVTTEDGQDQII   76 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHTTTC-CGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCC-CCCceEEEEccCCCHHHHHHHH
Confidence            369999999999999999999999999999999999984   445555555543211 2346889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCC---CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecC-CCCccCCh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKA---GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTS-VEPLWHSP  192 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS-~~~~~~~~  192 (272)
                      +++.+++|++|+||||||.....   ....+.+.++|++++++|+.++++++++++|+|++ +|.+|+++| .++..+.+
T Consensus        77 ~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~  156 (272)
T d1xkqa_          77 NSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQP  156 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCC
T ss_pred             HHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCC
Confidence            99999999999999999986431   23356788899999999999999999999999965 466666666 45566655


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH--------HHHHhhccCCCCCCCCCccchhh
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE--------EESAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~  250 (272)
                      .              +++||.||+++|||||+|+||+|+|+|.......        +....+...+|++|+.+|+|||+
T Consensus       157 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~  236 (272)
T d1xkqa_         157 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIAN  236 (272)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHH
T ss_pred             CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence            4              7999999999999999999999999986543321        12234567799999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+|++.+.|+|||+|.+|
T Consensus       237 ~v~fL~S~~as~~iTG~~i~vD  258 (272)
T d1xkqa_         237 IILFLADRNLSFYILGQSIVAD  258 (272)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHhCcchhCCccCeEEEeC
Confidence            9999999752568999999998

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-46  Score=312.74  Aligned_cols=218  Identities=25%  Similarity=0.343  Sum_probs=189.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+   ++.+..++        ..++.++.+|+++++++++++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~---~l~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~   69 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS---DLVSLAKE--------CPGIEPVCVDLGDWDATEKAL   69 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHH--------STTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHh--------cCCCeEEEEeCCCHHHHHHHH
Confidence            4699999999999999999999999999999999999843   33333322        235788999999999887765


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc-c--CCeEEEecCCCCccCChh-
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN-E--GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~--~g~iv~vsS~~~~~~~~~-  193 (272)
                          +++|++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.+.|.|. +  +|+||+++|.++..+.+. 
T Consensus        70 ----~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~  144 (242)
T d1cyda_          70 ----GGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNL  144 (242)
T ss_dssp             ----TTCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB
T ss_pred             ----HHcCCCeEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcc
Confidence                46799999999999854 57999999999999999999999999999999753 2  589999999988877765 


Q ss_pred             -------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 -------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 -------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                                   ++++|.|++++|||||+|+||+++|++..... .++..+.+.+..|++|+.+|+|||++++||+|+.
T Consensus       145 ~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~  224 (242)
T d1cyda_         145 ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             ccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence                         79999999999999999999999999865433 3456677788899999999999999999999998


Q ss_pred             CCCcccceeeccC
Q 039897          260 CSSYITGQVLHPN  272 (272)
Q Consensus       260 ~~~~~tG~~i~id  272 (272)
                       +.++|||+|.+|
T Consensus       225 -s~~itG~~i~vD  236 (242)
T d1cyda_         225 -SASTSGGGILVD  236 (242)
T ss_dssp             -GTTCCSSEEEES
T ss_pred             -hcCcCCceEEeC
Confidence             999999999998

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.2e-46  Score=316.37  Aligned_cols=230  Identities=29%  Similarity=0.414  Sum_probs=192.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.   +.+++..+++.+... ...++.++.+|++++++++++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~---~~l~~~~~~i~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~   76 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNE---DRLEETKQQILKAGV-PAEKINAVVADVTEASGQDDIIN   76 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHHcCC-CCcceEEEEeeCCCHHHHHHHHH
Confidence            58999999999999999999999999999999999984   445555555554221 23467899999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          119 EVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      ++.+++|++|++|||||.... ...+.+.+.++|++++++|+.+++++++++.|.|++  ++.|+++||.++..+.+.  
T Consensus        77 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~  156 (274)
T d1xhla_          77 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYP  156 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSH
T ss_pred             HHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCc
Confidence            999999999999999997533 235566789999999999999999999999999965  477888888777666554  


Q ss_pred             ------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC-H-------HHHHhhccCCCCCCCCCccchhhhhh
Q 039897          194 ------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS-E-------EESAQFGSEVPMKRAGQPIEVAPCYV  253 (272)
Q Consensus       194 ------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~dva~~~~  253 (272)
                                  ++++|.||+++|||||+|+||+|+|++...... +       +......+.+|++|+.+|+|||++++
T Consensus       157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~  236 (274)
T d1xhla_         157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV  236 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHH
Confidence                        799999999999999999999999997643322 1       11223456789999999999999999


Q ss_pred             hhhccCCCCcccceeeccC
Q 039897          254 FLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       254 ~L~s~~~~~~~tG~~i~id  272 (272)
                      ||+|++.+.|+|||+|.+|
T Consensus       237 fL~S~d~s~~itG~~i~vD  255 (274)
T d1xhla_         237 FLADRNLSSYIIGQSIVAD  255 (274)
T ss_dssp             HHHCHHHHTTCCSCEEEES
T ss_pred             HHcCCccccCccCcEEEeC
Confidence            9998533889999999998

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.3e-46  Score=312.88  Aligned_cols=227  Identities=27%  Similarity=0.334  Sum_probs=191.8

Q ss_pred             CCCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      ..+|+||++|||||+|  |||+++|++|+++|++|++++|+.+..+..    +++..    ...+..++++|++++++++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~----~~~~~----~~~~~~~~~~D~~~~~~v~   74 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA----EKLAE----ALGGALLFRADVTQDEELD   74 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH----HHHHH----HTTCCEEEECCTTCHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH----HHhhh----ccCcccccccccCCHHHHH
Confidence            3579999999999987  999999999999999999999874433222    22222    3456788999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS  191 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~  191 (272)
                      ++++++.+++|++|+||||||+...   ..++.+.+.++|+..+++|+.+++++++++.|+|+++|+||+++|..+..+.
T Consensus        75 ~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~  154 (256)
T d1ulua_          75 ALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV  154 (256)
T ss_dssp             HHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC
Confidence            9999999999999999999998532   2467788999999999999999999999999999999999999999888776


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-CHHHHHhhccCCCCCCCCCccchhhhhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-SEEESAQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      +.              ++++|.||+++|||||+|+||+++|++..... .++..+.+.+.+|++|+.+|+|||++++||+
T Consensus       155 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~  234 (256)
T d1ulua_         155 PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL  234 (256)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            65              79999999999999999999999999875543 3456677788899999999999999999999


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      |+. +.++|||+|.+|
T Consensus       235 S~~-s~~itG~~i~VD  249 (256)
T d1ulua_         235 SPL-ASGITGEVVYVD  249 (256)
T ss_dssp             SGG-GTTCCSCEEEES
T ss_pred             Cch-hCCccCCeEEEC
Confidence            998 999999999998

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=4.7e-46  Score=311.74  Aligned_cols=215  Identities=22%  Similarity=0.255  Sum_probs=191.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      |+|||||++|||+++|+.|+++|++|++++|+.+..+.++...    .         .++.+|++++++++++++++.++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~----~---------~~~~~dv~~~~~~~~~~~~~~~~   68 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA----E---------TYPQLKPMSEQEPAELIEAVTSA   68 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH----H---------HCTTSEECCCCSHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh----C---------cEEEeccCCHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999866554443221    1         23578999999999999999999


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--------  193 (272)
                      +|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||.++..+.+.        
T Consensus        69 ~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asK  148 (252)
T d1zmta1          69 YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSAR  148 (252)
T ss_dssp             HSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccccccccccc
Confidence            9999999999998666688999999999999999999999999999999965  589999999998887765        


Q ss_pred             ------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC-------CHHHHHhhccCCCCCCCCCccchhhhhhhhhccCC
Q 039897          194 ------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF-------SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHC  260 (272)
Q Consensus       194 ------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  260 (272)
                            ++++|.|++++|||||+|+||+++|++.....       .++..+.+.+.+|++|+.+|+|||++++||+|+. 
T Consensus       149 aal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~-  227 (252)
T d1zmta1         149 AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS-  227 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS-
T ss_pred             ccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch-
Confidence                  79999999999999999999999999986544       2345566778899999999999999999999998 


Q ss_pred             CCcccceeeccC
Q 039897          261 SSYITGQVLHPN  272 (272)
Q Consensus       261 ~~~~tG~~i~id  272 (272)
                      +.|+|||+|.+|
T Consensus       228 s~~iTG~~i~vd  239 (252)
T d1zmta1         228 CDYLTGQVFWLA  239 (252)
T ss_dssp             CGGGTTCEEEES
T ss_pred             hcCCcCCeEEEC
Confidence            999999999998

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4e-45  Score=307.33  Aligned_cols=226  Identities=30%  Similarity=0.490  Sum_probs=195.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .|+||+||||||++|||+++|+.|+++|++|++++++..  +.+.+..+++.+    .+.++.++.+|++++++++++++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~--~~~~~~~~~~~~----~g~~~~~~~~D~~~~~~v~~~~~   76 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS--KAAEEVVAELKK----LGAQGVAIQADISKPSEVVALFD   76 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCCh--HHHHHHHHHHHH----cCCCceEecCCCCCHHHHHHHHH
Confidence            499999999999999999999999999999999877533  334444555544    67789999999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc-CChh----
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW-HSPE----  193 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~-~~~~----  193 (272)
                      ++.+++|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++++++++|..+.. +.+.    
T Consensus        77 ~~~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y  155 (259)
T d1ja9a_          77 KAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALY  155 (259)
T ss_dssp             HHHHHHSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHH
T ss_pred             HHHHHcCCCcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhH
Confidence            99999999999999999854 57899999999999999999999999999999999988888887765433 3333    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCC-----------CCC-HHHHHhhccCCCCCCCCCccchhhh
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-----------SFS-EEESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                +++||.||+++|||||+|+||+++|+|...           ... ++..+.+....|++|+.+|+|||++
T Consensus       156 ~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~  235 (259)
T d1ja9a_         156 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence                      799999999999999999999999986411           112 3445667788999999999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++||+|+. +.++||++|.+|
T Consensus       236 v~fL~S~~-a~~itG~~i~vD  255 (259)
T d1ja9a_         236 VSALCQEE-SEWINGQVIKLT  255 (259)
T ss_dssp             HHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHhCch-hcCCcCceEEeC
Confidence            99999998 999999999998

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.9e-45  Score=309.37  Aligned_cols=224  Identities=28%  Similarity=0.370  Sum_probs=188.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.   +.+++..++       .+.++.++.+|+++++++++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~---~~l~~~~~~-------~~~~~~~~~~Dv~~~~~~~~~~   70 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA---ERLAELETD-------HGDNVLGIVGDVRSLEDQKQAA   70 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHH-------HGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHH-------cCCCeeEEecccccHHHHHHHH
Confidence            468999999999999999999999999999999999984   334433333       2456889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCC----cccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCCh
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGS----VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~  192 (272)
                      +++.+++|++|++|||||+......    ..+.+.++|+++|++|+.++++++++++|.|++ +|+||+++|.++..+.+
T Consensus        71 ~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~  150 (276)
T d1bdba_          71 SRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG  150 (276)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTS
T ss_pred             HHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCC
Confidence            9999999999999999998543322    234445679999999999999999999999965 69999999988877765


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCC---------CHHHHHhhccCCCCCCCCCccchh
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSF---------SEEESAQFGSEVPMKRAGQPIEVA  249 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva  249 (272)
                      .              ++++|.|++++ ||||+|+||+|+|+|.....         ..+..+.+...+|++|+.+|+|+|
T Consensus       151 ~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva  229 (276)
T d1bdba_         151 GGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYT  229 (276)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence            5              79999999975 99999999999999864321         123445677889999999999999


Q ss_pred             hhhhhhhccCCCCcccceeeccC
Q 039897          250 PCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       250 ~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++++||+|++.+.++|||+|.+|
T Consensus       230 ~~v~fL~S~~~a~~itG~~i~VD  252 (276)
T d1bdba_         230 GAYVFFATRGDAAPATGALLNYD  252 (276)
T ss_dssp             HHHHHHHCHHHHTTCSSCEEEES
T ss_pred             HHHHHHcCCcccCCeeCcEEEEC
Confidence            99999998533889999999998

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.5e-45  Score=303.20  Aligned_cols=209  Identities=31%  Similarity=0.414  Sum_probs=184.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |+||++|||||++|||+++|+.|+++|++|++++|+.   +.++       +      ....++.+|+++.      ++.
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~---~~l~-------~------~~~~~~~~Dv~~~------~~~   59 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE---ELLK-------R------SGHRYVVCDLRKD------LDL   59 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH---HHHH-------H------TCSEEEECCTTTC------HHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHH-------h------cCCcEEEcchHHH------HHH
Confidence            7899999999999999999999999999999999973   2221       1      1235788999863      455


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~----  193 (272)
                      +.++++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++  .|+||+++|..+..+.+.    
T Consensus        60 ~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y  138 (234)
T d1o5ia_          60 LFEKVKEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTS  138 (234)
T ss_dssp             HHHHSCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHHhCCCcEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccc
Confidence            6677899999999999854 578999999999999999999999999999999975  489999999887766655    


Q ss_pred             ----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 ----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 ----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                                ++++|.|++++|||||+|+||+++|++......++..+.+.+..|++|+.+|+|||++++||+|+. +.+
T Consensus       139 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~-s~~  217 (234)
T d1o5ia_         139 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK-ASY  217 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG-GTT
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh-hcC
Confidence                      799999999999999999999999999876667777788888999999999999999999999998 999


Q ss_pred             ccceeeccC
Q 039897          264 ITGQVLHPN  272 (272)
Q Consensus       264 ~tG~~i~id  272 (272)
                      +|||+|.+|
T Consensus       218 itG~~i~vD  226 (234)
T d1o5ia_         218 LTGQTIVVD  226 (234)
T ss_dssp             CCSCEEEES
T ss_pred             CcCcEEEEC
Confidence            999999998

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.9e-44  Score=305.32  Aligned_cols=227  Identities=33%  Similarity=0.573  Sum_probs=195.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+|+||++|||||++|||+++|++|+++|++|++++++..  +.+++..+++.+    .+.++.++.+|+++++++++++
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~--~~~~~~~~~~~~----~g~~~~~~~~D~~~~~~v~~~~   87 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST--ESAEEVVAAIKK----NGSDAACVKANVGVVEDIVRMF   87 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHHHh----hCCceeeEeCCCCCHHHHHHHH
Confidence            4599999999999999999999999999999999998743  334555555554    6778999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC-Chh---
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH-SPE---  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~-~~~---  193 (272)
                      +++.+.+|++|++|||+|... ..++.+.+.++|++++++|+.+++++++++.|+|++++++++++|..+... .+.   
T Consensus        88 ~~~~~~~g~idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~  166 (272)
T d1g0oa_          88 EEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAV  166 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHH
T ss_pred             HHHHHHhCCCCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhh
Confidence            999999999999999999854 578999999999999999999999999999999999999999988754432 222   


Q ss_pred             -----------HHHHHHHHhhCCeEEEEEecccccCCCCCC----------CCCHHH--HHhhccCCCCCCCCCccchhh
Q 039897          194 -----------ARGLALQLVERGIRVNGVAPGPIWTPLIPS----------SFSEEE--SAQFGSEVPMKRAGQPIEVAP  250 (272)
Q Consensus       194 -----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~dva~  250 (272)
                                 ++++|.||+++|||||+|+||+|+|++...          ....+.  .......+|++|+.+|+|||+
T Consensus       167 Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~  246 (272)
T d1g0oa_         167 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR  246 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHH
Confidence                       799999999999999999999999986421          122222  223567899999999999999


Q ss_pred             hhhhhhccCCCCcccceeeccC
Q 039897          251 CYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +++||+|+. +.++||++|.+|
T Consensus       247 ~v~fL~s~~-s~~itG~~i~vD  267 (272)
T d1g0oa_         247 VVCFLASND-GGWVTGKVIGID  267 (272)
T ss_dssp             HHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHhCch-hcCccCceEeEC
Confidence            999999998 999999999998

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=303.49  Aligned_cols=225  Identities=21%  Similarity=0.297  Sum_probs=189.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.+|+||++|||||++|||+++|+.|+++|++|++++|+.   +++.+..+++....  ...++.+++||++++++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~---~~l~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~   79 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV---GNIEELAAECKSAG--YPGTLIPYRCDLSNEEDILSM   79 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHHTT--CSSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcC--CCceEEEEEccCCCHHHHHHH
Confidence            4569999999999999999999999999999999999984   45555555655422  345788899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc----CCeEEEecCCCCccCCh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE----GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~----~g~iv~vsS~~~~~~~~  192 (272)
                      ++++.+++|++|+||||||... ..++.+.+.++|+..+++|+.++++++++++|.|++    +|+||++||.++....|
T Consensus        80 v~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p  158 (257)
T d1xg5a_          80 FSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP  158 (257)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS
T ss_pred             HHHHHHhcCCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCC
Confidence            9999999999999999999854 579999999999999999999999999999998854    58999999988764332


Q ss_pred             --h--------------HHHHHHHH--hhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          193 --E--------------ARGLALQL--VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       193 --~--------------~~~la~e~--~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                        .              +++|+.|+  +++||+||+|+||+++|++..... ++..+......|.+++.+|+|||++++|
T Consensus       159 ~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~~v~f  237 (257)
T d1xg5a_         159 LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH-DKDPEKAAATYEQMKCLKPEDVAEAVIY  237 (257)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT-TTCHHHHHHHHC---CBCHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC-hhhHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence              1              78999998  678999999999999999864322 2233455667789999999999999999


Q ss_pred             hhccCCCCcccceee
Q 039897          255 LACNHCSSYITGQVL  269 (272)
Q Consensus       255 L~s~~~~~~~tG~~i  269 (272)
                      |+|++ +.++|||++
T Consensus       238 L~s~~-a~~itG~i~  251 (257)
T d1xg5a_         238 VLSTP-AHIQIGDIQ  251 (257)
T ss_dssp             HHHSC-TTEEEEEEE
T ss_pred             HhCCh-hcCeECCEE
Confidence            99998 999999974

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=6.7e-43  Score=290.18  Aligned_cols=209  Identities=25%  Similarity=0.351  Sum_probs=182.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCe-------EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGAT-------VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~-------v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      .++||||||++|||+++|++|+++|++       |++++|+.   +.+.+..+++..    .+.++.++.+|++++++++
T Consensus         1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~---~~l~~~~~~~~~----~g~~~~~~~~Dvt~~~~v~   73 (240)
T d2bd0a1           1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA---ADLEKISLECRA----EGALTDTITADISDMADVR   73 (240)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH---HHHHHHHHHHHT----TTCEEEEEECCTTSHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH---HHHHHHHHHHHh----cCCcEEEEEecCCCHHHHH
Confidence            367999999999999999999999998       88999884   445555555543    5677889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCCh
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSP  192 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~  192 (272)
                      ++++++.+++|++|+||||||+.. ..++.+.+.++|+++|++|+.|+++++++++|+|++  +|+||++||.++..+.+
T Consensus        74 ~~~~~~~~~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~  152 (240)
T d2bd0a1          74 RLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR  152 (240)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC
Confidence            999999999999999999999854 589999999999999999999999999999999965  58999999999888876


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      +              +++|+.|++++|||||+|+||+|+|+|..+... +.         ..++.+|+|+|+.++||+++
T Consensus       153 ~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~-~~---------~~~~~~PedvA~~v~~l~s~  222 (240)
T d2bd0a1         153 HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-EM---------QALMMMPEDIAAPVVQAYLQ  222 (240)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-TT---------GGGSBCHHHHHHHHHHHHTS
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH-hh---------HhcCCCHHHHHHHHHHHHcC
Confidence            6              799999999999999999999999999755321 11         23456899999999999998


Q ss_pred             CCCCcccceee
Q 039897          259 HCSSYITGQVL  269 (272)
Q Consensus       259 ~~~~~~tG~~i  269 (272)
                      + +.+++|+.+
T Consensus       223 ~-~~~~~~~~~  232 (240)
T d2bd0a1         223 P-SRTVVEEII  232 (240)
T ss_dssp             C-TTEEEEEEE
T ss_pred             C-ccCccCCEE
Confidence            8 888888854

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=296.42  Aligned_cols=216  Identities=29%  Similarity=0.423  Sum_probs=181.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .+||++|||||++|||+++|++|+++|++|++++|+.+.   +.+...++.+.  ..+.++.++.+|+++++++++++++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~---~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA---GVQCKAALHEQ--FEPQKTLFIQCDVADQQQLRDTFRK   75 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHTTT--SCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHHHh--cCCCcEEEEEeecCCHHHHHHHHHH
Confidence            379999999999999999999999999999999998444   44444444321  1345788999999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCccCChh-
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHSPE-  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~~~~~-  193 (272)
                      +.+++|++|+||||||+...         ++|++.+++|+.+++++++.++|+|++     +|+||++||.++..+.+. 
T Consensus        76 ~~~~~G~iDilVnnAg~~~~---------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~  146 (254)
T d2gdza1          76 VVDHFGRLDILVNNAGVNNE---------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ  146 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCS---------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHcCCcCeeccccccccc---------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCc
Confidence            99999999999999998532         347899999999999999999999965     378999999998877765 


Q ss_pred             -------------HHH--HHHHHhhCCeEEEEEecccccCCCCCCCCCHH-------HHHhhccCCCCCCCCCccchhhh
Q 039897          194 -------------ARG--LALQLVERGIRVNGVAPGPIWTPLIPSSFSEE-------ESAQFGSEVPMKRAGQPIEVAPC  251 (272)
Q Consensus       194 -------------~~~--la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~  251 (272)
                                   +++  |+.|++++|||||+|+||+|+|+|......++       ..+.+...+|++|+.+|+|||++
T Consensus       147 ~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  226 (254)
T d2gdza1         147 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                         454  78899999999999999999999875443322       23445566788999999999999


Q ss_pred             hhhhhccCCCCcccceeeccC
Q 039897          252 YVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       252 ~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ++||+|++   ++|||+|.+|
T Consensus       227 v~fL~s~~---~itG~~i~Vd  244 (254)
T d2gdza1         227 LITLIEDD---ALNGAIMKIT  244 (254)
T ss_dssp             HHHHHHCT---TCSSCEEEEE
T ss_pred             HHHHHcCC---CCCCCEEEEC
Confidence            99999965   5999999987

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=4.4e-42  Score=293.90  Aligned_cols=231  Identities=24%  Similarity=0.346  Sum_probs=193.9

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           34 YKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        34 ~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      +.+.++|+||++|||||++|||+++|++|+++|++|++++|+..   ++.+..+++...   .+.++.++.+|+++++++
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~---~l~~~~~~l~~~---~g~~~~~~~~D~~~~~~v   90 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD---VLKATAEQISSQ---TGNKVHAIQCDVRDPDMV   90 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHHHH---HSSCEEEEECCTTCHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH---HHHHHHHHHHHh---cCCceEEEEecccChHHH
Confidence            33457899999999999999999999999999999999999844   444444444332   467788999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccC
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWH  190 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~  190 (272)
                      +++++.+.+.++++|+||||||... ..++...+.++|...+.+|+.+.+.+.+.+.+.+..   .+.+++++|.++..+
T Consensus        91 ~~~~~~~~~~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~  169 (294)
T d1w6ua_          91 QNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG  169 (294)
T ss_dssp             HHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred             HHHhhhhhhhccccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc
Confidence            9999999999999999999999854 578899999999999999999999999988777633   467888888765554


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCC--HHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFS--EEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                      .+.              ++.+|.|++++|||||+|+||+|+|++......  ++..+.+.+.+|++|+.+|+|||++++|
T Consensus       170 ~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~f  249 (294)
T d1w6ua_         170 SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAF  249 (294)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence            443              799999999999999999999999998755432  3556677888999999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |+|+. +.++||++|.+|
T Consensus       250 L~sd~-s~~itG~~i~vD  266 (294)
T d1w6ua_         250 LCSDY-ASWINGAVIKFD  266 (294)
T ss_dssp             HTSGG-GTTCCSCEEEES
T ss_pred             HhCch-hcCCCCcEEEEC
Confidence            99998 999999999998

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=289.24  Aligned_cols=218  Identities=27%  Similarity=0.371  Sum_probs=182.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +.+|+||++|||||++|||+++|+.|+++|++|++++|++...+.+       .     ....+....+|+.+.+.++  
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~-------~-----~~~~~~~~~~d~~~~~~~~--   66 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-------E-----KYPGIQTRVLDVTKKKQID--   66 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG-------G-----GSTTEEEEECCTTCHHHHH--
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-------H-----hccCCceeeeecccccccc--
Confidence            3469999999999999999999999999999999999984332221       1     2345677888988766554  


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCc-cCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPL-WHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~-~~~~~  193 (272)
                        .+.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|++  .|+||+++|..+. .+.+.
T Consensus        67 --~~~~~~~~id~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~  143 (245)
T d2ag5a1          67 --QFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN  143 (245)
T ss_dssp             --HHHHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT
T ss_pred             --ccccccccceeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccc
Confidence              44556789999999999955 478999999999999999999999999999998865  5899999997664 34333


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCC-----CCCHHHHHhhccCCCCCCCCCccchhhhhhh
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS-----SFSEEESAQFGSEVPMKRAGQPIEVAPCYVF  254 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  254 (272)
                                    +|++|.||+++|||||+|+||+++|++...     ....+..+.+.+.+|++|+.+|+|+|+.+.|
T Consensus       144 ~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~f  223 (245)
T d2ag5a1         144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVY  223 (245)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence                          799999999999999999999999998642     1123345567778999999999999999999


Q ss_pred             hhccCCCCcccceeeccC
Q 039897          255 LACNHCSSYITGQVLHPN  272 (272)
Q Consensus       255 L~s~~~~~~~tG~~i~id  272 (272)
                      |++++ +.++|||+|.+|
T Consensus       224 L~s~~-s~~iTG~~i~VD  240 (245)
T d2ag5a1         224 LASDE-SAYVTGNPVIID  240 (245)
T ss_dssp             HHSGG-GTTCCSCEEEEC
T ss_pred             HhChh-hCCCcCceEEeC
Confidence            99998 999999999998

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.7e-42  Score=292.62  Aligned_cols=214  Identities=26%  Similarity=0.353  Sum_probs=181.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc------hhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ------EEKDAQETLEILREAKTSDAKDPMAISADLGFDE  111 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++++..      ..+.+.+..+++..       +.....+|+++.+
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~~~~~   75 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-------RGGKAVANYDSVE   75 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-------TTCEEEEECCCGG
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-------cccccccccchHH
Confidence            5699999999999999999999999999999999988643      23445555555443       3456788999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCcc
Q 039897          112 NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLW  189 (272)
Q Consensus       112 ~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~  189 (272)
                      +++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..
T Consensus        76 ~~~~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~  154 (302)
T d1gz6a_          76 AGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  154 (302)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC
Confidence            999999999999999999999999965 579999999999999999999999999999999965  58999999998877


Q ss_pred             CChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhh
Q 039897          190 HSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       190 ~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  255 (272)
                      +.++              +++|+.|++++|||||+|+||++.|.+.. ..+++..          +..+|+|||+.++||
T Consensus       155 ~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~-~~~~~~~----------~~~~PedvA~~v~fL  223 (302)
T d1gz6a_         155 GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET-VMPEDLV----------EALKPEYVAPLVLWL  223 (302)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGG-GSCHHHH----------HHSCGGGTHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhh-cCcHhhH----------hcCCHHHHHHHHHHH
Confidence            7665              79999999999999999999999777642 2233222          234799999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +|+. + ++||++|.+|
T Consensus       224 ~S~~-a-~itG~~i~vd  238 (302)
T d1gz6a_         224 CHES-C-EENGGLFEVG  238 (302)
T ss_dssp             TSTT-C-CCCSCEEEEE
T ss_pred             cCCC-c-CCCCcEEEeC
Confidence            9865 4 7999999886

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-40  Score=279.64  Aligned_cols=225  Identities=21%  Similarity=0.206  Sum_probs=187.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHH---cCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYAL---EGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~---~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|+.   +.+.+..+++....  .+.++.++++|++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~---~~l~~~~~~l~~~~--~~~~~~~~~~Dvs~~~~v~   76 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE---SMLRQLKEELGAQQ--PDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH---HHHHHHHHHHHHHC--TTSEEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCH---HHHHHHHHHHHhhc--CCceEEEEEccCCCHHHHH
Confidence            469999999999999999999999986   799999999984   44555555554321  3557889999999999999


Q ss_pred             HHHHHHHHh----cCCccEEEEcccccC--CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC----CeEEEecC
Q 039897          115 RVVDEVVNA----YGKIDILVNNAAVQY--KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG----SAIINTTS  184 (272)
Q Consensus       115 ~~~~~~~~~----~g~ld~vI~~ag~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----g~iv~vsS  184 (272)
                      ++++.+.+.    ++.+|++|||||...  ...++.+.+.++|+++|++|+.++++++++++|+|++.    |+||++||
T Consensus        77 ~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS  156 (259)
T d1oaaa_          77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             HHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccc
Confidence            999998773    357899999999753  34568899999999999999999999999999999763    68999999


Q ss_pred             CCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCC----CCCHHHHHhhccCCCCCCCCCcc
Q 039897          185 VEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS----SFSEEESAQFGSEVPMKRAGQPI  246 (272)
Q Consensus       185 ~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  246 (272)
                      .++..+.++              +++||.|  .+|||||+|+||+|+|+|...    ...++..+.+....+.+++.+|+
T Consensus       157 ~~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~  234 (259)
T d1oaaa_         157 LCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG  234 (259)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHH
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHH
Confidence            988887765              6888888  679999999999999997532    22344555566667889999999


Q ss_pred             chhhhhhhhhccCCCCcccceeecc
Q 039897          247 EVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       247 dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      |+|+.+++|+++  +.++|||+|++
T Consensus       235 evA~~i~~ll~~--~s~~TG~~idv  257 (259)
T d1oaaa_         235 TSAQKLLGLLQK--DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHH--CCSCTTEEEET
T ss_pred             HHHHHHHHHhhh--ccCCCCCeEEe
Confidence            999999999986  45999999975

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=272.34  Aligned_cols=219  Identities=26%  Similarity=0.393  Sum_probs=182.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+..+.   ..+++       ..+.....+|+.+.+.++....
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~---~~~~l-------~~~~~~~~~~~~~~~~~~~~~~   71 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA---QAKKL-------GNNCVFAPADVTSEKDVQTALA   71 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH---HHHHH-------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---HHHHh-------CCCccccccccccccccccccc
Confidence            5899999999999999999999999999999999998655443   33332       4567889999999999999999


Q ss_pred             HHHHhcCCccEEEEcccccCC-----CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--------CCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYK-----AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--------GSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~g~iv~vsS~  185 (272)
                      .+...++.+|.+++|+++...     ..++.+.+.++|++++++|+.+++++++++.|+|..        +|+||++||.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~  151 (248)
T d2o23a1          72 LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  151 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             ccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecch
Confidence            999999999999999886432     246678889999999999999999999999998742        4789999999


Q ss_pred             CCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCC-CCCCCccchhh
Q 039897          186 EPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVAP  250 (272)
Q Consensus       186 ~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~  250 (272)
                      ++..+.++              +++||.|++++|||||+|+||+++|+|... ..++..+.+...+|+ +|+.+|+|||+
T Consensus       152 ~~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~~R~g~peevA~  230 (248)
T d2o23a1         152 AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVPFPSRLGDPAEYAH  230 (248)
T ss_dssp             HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSSSCSCBCHHHHHH
T ss_pred             hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc-CCHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence            88777655              799999999999999999999999999754 344555566667776 89999999999


Q ss_pred             hhhhhhccCCCCcccceeecc
Q 039897          251 CYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       251 ~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +++||++   +.|+|||+|+|
T Consensus       231 ~v~fL~s---~~~itGq~I~v  248 (248)
T d2o23a1         231 LVQAIIE---NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHH---CTTCCSCEEEE
T ss_pred             HHHHHHh---CCCCCceEeEC
Confidence            9999997   45999999975

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-39  Score=270.91  Aligned_cols=225  Identities=24%  Similarity=0.321  Sum_probs=193.0

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+.+..+.+    +++..    .......+..|+++..++...
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~   73 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV----EEFAA----QLGSDIVLQCDVAEDASIDTM   73 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH----HHHHH----HTTCCCEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHHHh----hcCCcceeecccchHHHHHHH
Confidence            58999999999998  899999999999999999999985433333    22222    355677889999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKA----GSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                      ++++.+.++.+|++|||+++....    ........+.|...+++|+.+.+.+.+.+.+.|++++.|+++||..+..+.+
T Consensus        74 ~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~  153 (258)
T d1qsga_          74 FAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP  153 (258)
T ss_dssp             HHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT
T ss_pred             HHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC
Confidence            999999999999999999885321    2234567788999999999999999999999999888999999988777765


Q ss_pred             h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhhc
Q 039897          193 E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       193 ~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      .              ++++|.||+++|||||+|+||+|+|++....... ...+...+.+|++|+.+|+|||++++||+|
T Consensus       154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s  233 (258)
T d1qsga_         154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS  233 (258)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence            4              7999999999999999999999999997654333 445567788999999999999999999999


Q ss_pred             cCCCCcccceeeccC
Q 039897          258 NHCSSYITGQVLHPN  272 (272)
Q Consensus       258 ~~~~~~~tG~~i~id  272 (272)
                      +. +.++||++|.+|
T Consensus       234 ~~-s~~itG~~i~vD  247 (258)
T d1qsga_         234 DL-SAGISGEVVHVD  247 (258)
T ss_dssp             GG-GTTCCSCEEEES
T ss_pred             ch-hcCccCceEEEC
Confidence            88 999999999998

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=3.3e-40  Score=276.11  Aligned_cols=216  Identities=17%  Similarity=0.176  Sum_probs=173.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCC-ChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLG-FDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~  116 (272)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.++.+.+.+....      ....++.++.+|++ +.++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~   74 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAI------NPKVNITFHTYDVTVPVAESKKL   74 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHH------CTTSEEEEEECCTTSCHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhh------CCCCCEEEEEeecCCCHHHHHHH
Confidence            469999999999999999999999999999999999886655443322211      14567889999998 56789999


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-----CCeEEEecCCCCccCC
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-----GSAIINTTSVEPLWHS  191 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~g~iv~vsS~~~~~~~  191 (272)
                      ++.+.+++|++|+||||||..         +.++|++++++|+.|+++++++++|.|.+     +|+||+++|.++..+.
T Consensus        75 ~~~~~~~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~  145 (254)
T d1sbya1          75 LKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI  145 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC
Confidence            999999999999999999973         34678999999999999999999999954     4789999999998777


Q ss_pred             hh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHH-HhhccCCCCCCCCCccchhhhhhhhh
Q 039897          192 PE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEES-AQFGSEVPMKRAGQPIEVAPCYVFLA  256 (272)
Q Consensus       192 ~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~L~  256 (272)
                      ++              +++|+.|++++|||||+|+||+|+|+|.......... +.........+..+|+++|+.++++.
T Consensus       146 ~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~  225 (254)
T d1sbya1         146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI  225 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhh
Confidence            65              7999999999999999999999999976443222211 11122223334568899999888877


Q ss_pred             ccCCCCcccceeeccC
Q 039897          257 CNHCSSYITGQVLHPN  272 (272)
Q Consensus       257 s~~~~~~~tG~~i~id  272 (272)
                      +.    ..||++|.+|
T Consensus       226 ~~----~~tG~vi~vd  237 (254)
T d1sbya1         226 EA----NKNGAIWKLD  237 (254)
T ss_dssp             HH----CCTTCEEEEE
T ss_pred             hC----CCCCCEEEEC
Confidence            54    3599999886

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-39  Score=266.60  Aligned_cols=203  Identities=22%  Similarity=0.319  Sum_probs=174.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.   +++.+..+++..    .+.++.++.||++|++++++++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~---~~l~~~~~~~~~----~~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK---HGLEETAAKCKG----LGAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHH
Confidence            569999999999999999999999999999999999984   445555555554    6778999999999999999999


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh--
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~--  193 (272)
                      +++.+++|++|++|||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||.++..+.+.  
T Consensus        76 ~~i~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~  154 (244)
T d1yb1a_          76 KKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLL  154 (244)
T ss_dssp             HHHHHHTCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHH
T ss_pred             HHHHHHcCCCceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcH
Confidence            999999999999999999965 478888999999999999999999999999999966  478999999999988766  


Q ss_pred             ------------HHHHHHHHhh---CCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 ------------ARGLALQLVE---RGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 ------------~~~la~e~~~---~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                  +++|+.|+++   +||+||+|+||+|+|+|....  ..         +..+..+|+++|+.++..+..
T Consensus       155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~--~~---------~~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--ST---------SLGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--HH---------HHCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc--Cc---------cccCCCCHHHHHHHHHHHHhc
Confidence                        7899999987   589999999999999997542  11         123456899999998887655


Q ss_pred             C
Q 039897          259 H  259 (272)
Q Consensus       259 ~  259 (272)
                      .
T Consensus       224 ~  224 (244)
T d1yb1a_         224 E  224 (244)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.8e-39  Score=281.60  Aligned_cols=231  Identities=17%  Similarity=0.198  Sum_probs=181.5

Q ss_pred             CCcEEEEEc--CCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHH-HHHhhhcCCC----CceE-----------
Q 039897           41 RGKVALVTG--GDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI-LREAKTSDAK----DPMA-----------  102 (272)
Q Consensus        41 ~~k~vlVtG--as~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~-----------  102 (272)
                      ++|++||||  +++|||++||+.|+++|++|+++++.............+ +.........    ....           
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  568999999999999999999999875443322221111 0000000000    0011           


Q ss_pred             ---------EeccCCChHHHHHHHHHHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhc
Q 039897          103 ---------ISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRH  172 (272)
Q Consensus       103 ---------~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  172 (272)
                               ..+|+++.++++++++.+.+.+|++|+||||+|.... .+++.+.+.++|+++|++|+++++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                     1347778889999999999999999999999997543 357889999999999999999999999999999


Q ss_pred             cccCCeEEEecCCCCccCChh---------------HHHHHHHHhh-CCeEEEEEecccccCCCCCC-------------
Q 039897          173 MNEGSAIINTTSVEPLWHSPE---------------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPS-------------  223 (272)
Q Consensus       173 ~~~~g~iv~vsS~~~~~~~~~---------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~-------------  223 (272)
                      |+++|+||++||.++..+.|+               +++||.||++ +|||||+|+||+|+|+....             
T Consensus       161 m~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~  240 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-----------
T ss_pred             cccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhh
Confidence            999999999998876655432               7899999986 69999999999999942110             


Q ss_pred             -------------------------------CCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          224 -------------------------------SFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       224 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                                                     ...++..+.+.+..|++|+.+|+|||++++||+|+. +.++|||+|.+|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~-s~~iTGq~i~VD  319 (329)
T d1uh5a_         241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRE-SRAITGQTIYVD  319 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             hhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCch-hCCccCCeEEEC
Confidence                                           111334456677889999999999999999999998 999999999998

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3e-39  Score=276.40  Aligned_cols=236  Identities=22%  Similarity=0.215  Sum_probs=181.9

Q ss_pred             CCCCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhc--CC--CCc-eEEecc--
Q 039897           36 PSNKLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTS--DA--KDP-MAISAD--  106 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~--~~--~~~-~~~~~D--  106 (272)
                      +..+|+||++|||||++  |||+++|+.|+++|++|++++|+....................  ..  ... ....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            35689999999999876  9999999999999999999998743322221111100000000  00  000 122222  


Q ss_pred             ------------------CCChHHHHHHHHHHHHhcCCccEEEEcccccCC-CCCcccCCHHHHHHHHHhhhHHHHHHHH
Q 039897          107 ------------------LGFDENCKRVVDEVVNAYGKIDILVNNAAVQYK-AGSVEEIDEERLERVFRTNIFSHFFMTR  167 (272)
Q Consensus       107 ------------------~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~  167 (272)
                                        .++..+++++++++.+++|++|+||||||.... ..++.+.+.++|++.+++|+.+++++++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              355667889999999999999999999998532 4678999999999999999999999999


Q ss_pred             HHHhccccCCeEEEecCCCCccCChh---------------HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCC-HHHH
Q 039897          168 HSLRHMNEGSAIINTTSVEPLWHSPE---------------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFS-EEES  230 (272)
Q Consensus       168 ~~~~~~~~~g~iv~vsS~~~~~~~~~---------------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~-~~~~  230 (272)
                      ++++.|++++.++.+++.+.......               ++.++.+++ ++|||||+|+||+++|++...... ++..
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~  241 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             HHHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHH
Confidence            99999998888777776544322211               678899996 589999999999999999865433 3455


Q ss_pred             HhhccCCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          231 AQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       231 ~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +......|++|+.+|+|||++++||+|+. +.++|||+|.+|
T Consensus       242 ~~~~~~~PlgR~~~peevA~~v~fL~S~~-a~~itGq~i~vD  282 (297)
T d1d7oa_         242 EYSYNNAPIQKTLTADEVGNAAAFLVSPL-ASAITGATIYVD  282 (297)
T ss_dssp             HHHHHHSSSCCCBCHHHHHHHHHHHTSGG-GTTCCSCEEEES
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCch-hcCCcCceEEEC
Confidence            66778899999999999999999999998 999999999998

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-38  Score=270.80  Aligned_cols=225  Identities=23%  Similarity=0.297  Sum_probs=173.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ..|+||||||++|||+++|++|+++|++|+++++..++.+...+..+...+.. ..+.++.++.+|++++++++++++++
T Consensus         1 ~kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA-CPPGSLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTT-CCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHh-ccCCceEEEeccccchHhhhhhhhhc
Confidence            36899999999999999999999999987766554433333333222222221 25678999999999999999999887


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc--CCeEEEecCCCCccCChh-----
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE--GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+  |.+|+||||+|... ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.+.     
T Consensus        80 ~~--g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~  156 (285)
T d1jtva_          80 TE--GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (285)
T ss_dssp             TT--SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             cc--cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHH
Confidence            43  78999999999854 578999999999999999999999999999999965  589999999998888766     


Q ss_pred             ---------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-H---------HHHh------hccCCCCCCCCCccch
Q 039897          194 ---------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-E---------ESAQ------FGSEVPMKRAGQPIEV  248 (272)
Q Consensus       194 ---------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~---------~~~~------~~~~~~~~~~~~~~dv  248 (272)
                               +++|+.|++++||+||+|+||+|+|+|....... +         ..+.      .....+..+..+|+||
T Consensus       157 asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeV  236 (285)
T d1jtva_         157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV  236 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHH
Confidence                     7899999999999999999999999998654321 1         1111      1123345567899999


Q ss_pred             hhhhhhhhccCC--CCcccceee
Q 039897          249 APCYVFLACNHC--SSYITGQVL  269 (272)
Q Consensus       249 a~~~~~L~s~~~--~~~~tG~~i  269 (272)
                      |+++++++..+.  ..|++|+.+
T Consensus       237 A~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         237 AEVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHhCCCCCeEEecHHHH
Confidence            999999997641  467888754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-38  Score=265.09  Aligned_cols=204  Identities=25%  Similarity=0.277  Sum_probs=169.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +++|||||++|||+++|++|+++ |++|++++|+   .+++++..+++..    .+.++.++.+|+++.++++++++++.
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~---~~~~~~~~~~l~~----~~~~~~~~~~Dvs~~~sv~~~~~~~~   76 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD---VTRGQAAVQQLQA----EGLSPRFHQLDIDDLQSIRALRDFLR   76 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS---HHHHHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHHHHh----cCCcEEEEEEecCCHHHHHHHHHHHH
Confidence            45699999999999999999987 8999999998   4455666666655    56788999999999999999999999


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC----------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS----------  191 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~----------  191 (272)
                      +++|+||+||||||+.. ..++.+.+.++|+.+|++|++|++++++.++|+|+++|+||+++|..+..+.          
T Consensus        77 ~~~g~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k  155 (275)
T d1wmaa1          77 KEYGGLDVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQK  155 (275)
T ss_dssp             HHHSSEEEEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             HhcCCcEEEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhh
Confidence            99999999999999965 3667777889999999999999999999999999999999999996442110          


Q ss_pred             -----------------------------------hh----------HHHHHHHHhh----CCeEEEEEecccccCCCCC
Q 039897          192 -----------------------------------PE----------ARGLALQLVE----RGIRVNGVAPGPIWTPLIP  222 (272)
Q Consensus       192 -----------------------------------~~----------~~~la~e~~~----~gi~vn~i~PG~v~t~~~~  222 (272)
                                                         .+          ++.+++++++    .||+||+|+||+|.|+|..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~  235 (275)
T d1wmaa1         156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  235 (275)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCccc
Confidence                                               01          5677777766    4999999999999999964


Q ss_pred             CCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhc-cCCCCcccceeec
Q 039897          223 SSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLAC-NHCSSYITGQVLH  270 (272)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s-~~~~~~~tG~~i~  270 (272)
                      ..                ...+|+|+|+.++|++. ++.....+|+.+.
T Consensus       236 ~~----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         236 PK----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             TT----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             Cc----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence            32                12368999999999873 3326778998874

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.9e-37  Score=261.17  Aligned_cols=225  Identities=24%  Similarity=0.326  Sum_probs=186.5

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGDS--GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~--gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+.+..+    .+.++.+    ......++.+|++++++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~----~~~~l~~----~~~~~~~~~~d~~~~~~~~~~   73 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK----RVRPIAQ----ELNSPYVYELDVSKEEHFKSL   73 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH----HHHHHHH----HTTCCCEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHHHh----hCCceeEeeecccchhhHHHH
Confidence            58999999999765  9999999999999999999999843332    3333333    355677899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~  193 (272)
                      ++++.+.+|.+|++|||+|....   ...+.....+.+...+.++..+.+.+.+...+.++.++.|+++++.+...+.+.
T Consensus        74 ~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~  153 (274)
T d2pd4a1          74 YNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH  153 (274)
T ss_dssp             HHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT
T ss_pred             HHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccccc
Confidence            99999999999999999997543   234556677788888888888888888888887776677887777765554443


Q ss_pred             --------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCH-HHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          194 --------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSE-EESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       194 --------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                                    ++++|.|++++|||||+|+||++.|++....... +.........|.+|+.+|+|||+.++||+|+
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~  233 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS  233 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhCh
Confidence                          7899999999999999999999999998665553 4445566788999999999999999999999


Q ss_pred             CCCCcccceeeccC
Q 039897          259 HCSSYITGQVLHPN  272 (272)
Q Consensus       259 ~~~~~~tG~~i~id  272 (272)
                      . +.++|||+|.+|
T Consensus       234 ~-s~~itG~~i~vD  246 (274)
T d2pd4a1         234 L-SSGVSGEVHFVD  246 (274)
T ss_dssp             G-GTTCCSCEEEES
T ss_pred             h-hCCCcCceEEEC
Confidence            8 999999999988

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=3.3e-37  Score=261.92  Aligned_cols=220  Identities=27%  Similarity=0.392  Sum_probs=172.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCC-----------------ceEEec
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKD-----------------PMAISA  105 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~  105 (272)
                      .++|||||++|||+++|++|+++|++|++++++..+  ...+..+++...   .+..                 ...+.+
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--~~~~~~~~l~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~   77 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA--EANALSATLNAR---RPNSAITVQADLSNVATAPVSGADGSA   77 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHHHHH---STTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHH--HHHHHHHHHHhh---cCCceEEEEeecccccccccccccccc
Confidence            389999999999999999999999999999886432  333334444332   2222                 334567


Q ss_pred             cCCChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHH--------------HHHHHhhhHHHHHHHHHHHh
Q 039897          106 DLGFDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERL--------------ERVFRTNIFSHFFMTRHSLR  171 (272)
Q Consensus       106 D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~--------------~~~~~~N~~~~~~l~~~~~~  171 (272)
                      |++++++++++++++.+++|++|+||||||+... .++.+.+.++|              ..+|.+|+.+++++.+.+.+
T Consensus        78 dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  156 (284)
T d1e7wa_          78 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP-TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  156 (284)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCC-CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccc
Confidence            7999999999999999999999999999998643 56666555544              45789999999999999877


Q ss_pred             cc------cc--CCeEEEecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHH
Q 039897          172 HM------NE--GSAIINTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE  229 (272)
Q Consensus       172 ~~------~~--~g~iv~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~  229 (272)
                      .+      ++  .++|++++|.....+.++              ++++|.||+++|||||+|+||++.+..   ...++.
T Consensus       157 ~~~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~---~~~~~~  233 (284)
T d1e7wa_         157 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---DMPPAV  233 (284)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG---GSCHHH
T ss_pred             hhhhhHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc---cCCHHH
Confidence            64      22  468999999887766554              799999999999999999999865432   345666


Q ss_pred             HHhhccCCCC-CCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          230 SAQFGSEVPM-KRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       230 ~~~~~~~~~~-~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .+.+....|+ +|+.+|+|||++++||+|++ +.|+|||+|.+|
T Consensus       234 ~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~-s~~itG~~i~VD  276 (284)
T d1e7wa_         234 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK-AKYITGTCVKVD  276 (284)
T ss_dssp             HHHHHTTCTTTTSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHHHhCch-hcCccCCeEEEC
Confidence            7777777875 89999999999999999998 999999999998

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.1e-36  Score=251.26  Aligned_cols=205  Identities=17%  Similarity=0.226  Sum_probs=163.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHH---HcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYA---LEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~---~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |+||||||++|||+++|++|+   ++|++|++++|+.+..+.+++..    .    ...++.++.+|++|++++++++++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~~~Dvs~~~~v~~~~~~   74 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA----K----NHSNIHILEIDLRNFDAYDKLVAD   74 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH----H----HCTTEEEEECCTTCGGGHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH----h----cCCcEEEEEEEeccHHHHHHHHhh
Confidence            799999999999999999996   57999999999977665543322    1    356899999999999999999999


Q ss_pred             HHH--hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-------------CCeEEEecC
Q 039897          120 VVN--AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-------------GSAIINTTS  184 (272)
Q Consensus       120 ~~~--~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-------------~g~iv~vsS  184 (272)
                      +.+  .++++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++             .|++|+++|
T Consensus        75 i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S  154 (248)
T d1snya_          75 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  154 (248)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             hHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccc
Confidence            854  67899999999998766667889999999999999999999999999999964             478999999


Q ss_pred             CCCccC---Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccc
Q 039897          185 VEPLWH---SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIE  247 (272)
Q Consensus       185 ~~~~~~---~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  247 (272)
                      ..+...   .++              +++++.|++++||+||+|+||+|+|+|.....+            .    .+++
T Consensus       155 ~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~------------~----~~~~  218 (248)
T d1snya_         155 ILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP------------L----DVPT  218 (248)
T ss_dssp             GGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS------------B----CHHH
T ss_pred             cccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC------------C----CchH
Confidence            875432   111              789999999999999999999999999754321            1    2233


Q ss_pred             hhhhhhhhhccCCCCcccceeeccC
Q 039897          248 VAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       248 va~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .++.++.++... ....||++|++|
T Consensus       219 ~~~~i~~~i~~l-~~~~tG~~i~~d  242 (248)
T d1snya_         219 STGQIVQTISKL-GEKQNGGFVNYD  242 (248)
T ss_dssp             HHHHHHHHHHHC-CGGGTTCEECTT
T ss_pred             HHHHHHHHHHhc-CccCCCcEEEEC
Confidence            333344444333 345688888776

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=9.5e-36  Score=250.86  Aligned_cols=224  Identities=21%  Similarity=0.243  Sum_probs=179.1

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTGG--DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtGa--s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..|+||++|||||  ++|||+++|++|+++|++|++++|+..+   +.+   .+.+   ..+.+...+++|+++++++++
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~---~~~---~~~~---~~~~~~~~~~~dv~~~~~~~~   72 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQ---RITD---RLPAKAPLLELDVQNEEHLAS   72 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHH---HHH---HHHT---TSSSCCCEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHH---HHH---HHHH---HcCCceeeEeeeccccccccc
Confidence            5699999999994  5799999999999999999999998433   222   1211   156778899999999999999


Q ss_pred             HHHHHHHhc---CCccEEEEcccccC----CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          116 VVDEVVNAY---GKIDILVNNAAVQY----KAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       116 ~~~~~~~~~---g~ld~vI~~ag~~~----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                      +++.+.+.+   +.+|++|||+|+..    ...++.+.+.++|...+.+|+.+.+...+...+++.+.+.|+. +|....
T Consensus        73 ~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~s~~~~  151 (268)
T d2h7ma1          73 LAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVG-MDFDPS  151 (268)
T ss_dssp             HHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE-EECCCS
T ss_pred             ccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccc-cccccc
Confidence            999998764   67999999999743    2346778999999999999999999999999888766555544 444444


Q ss_pred             cCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCC----CCC-------HHHHHhhccCCCCCC-C
Q 039897          189 WHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPS----SFS-------EEESAQFGSEVPMKR-A  242 (272)
Q Consensus       189 ~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~----~~~-------~~~~~~~~~~~~~~~-~  242 (272)
                      ...+.              ++++|.||+++|||||+|+||++.|++...    ...       ....+......|+++ +
T Consensus       152 ~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~  231 (268)
T d2h7ma1         152 RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNM  231 (268)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCT
T ss_pred             ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCC
Confidence            44443              799999999999999999999999986421    111       122334556678766 8


Q ss_pred             CCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          243 GQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       243 ~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      .+|+|+|+++.||+|+. +.++|||+|.+|
T Consensus       232 ~~p~dva~~v~fL~Sd~-a~~iTG~~i~vD  260 (268)
T d2h7ma1         232 KDATPVAKTVCALLSDW-LPATTGDIIYAD  260 (268)
T ss_dssp             TCCHHHHHHHHHHHSSS-CTTCCSEEEEES
T ss_pred             CCHHHHHHHHHHHhCch-hcCccCCEEEEC
Confidence            99999999999999988 999999999998

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=9.1e-36  Score=248.70  Aligned_cols=206  Identities=18%  Similarity=0.198  Sum_probs=161.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.+..+++.       +   ....++.++.+|+++++++++++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~-------~---~~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-------S---IKDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-------T---CCCTTEEEEECCTTCHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH-------H---hhCCceEEEEEecCCHHHHHHHH
Confidence            5679999999999999999999999996  6888888855443321       1   14667899999999999999999


Q ss_pred             HHHHHhcCC--ccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-------------CCeEEEe
Q 039897          118 DEVVNAYGK--IDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-------------GSAIINT  182 (272)
Q Consensus       118 ~~~~~~~g~--ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-------------~g~iv~v  182 (272)
                      +++.+.++.  +|+||||||+.....++.+.+.++|+++|++|+.|++++++.++|+|++             .++++++
T Consensus        71 ~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~  150 (250)
T d1yo6a1          71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITI  150 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEE
T ss_pred             HHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccc
Confidence            999998764  9999999998766678889999999999999999999999999999964             2578888


Q ss_pred             cCCCCccCCh-----------h----------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCC
Q 039897          183 TSVEPLWHSP-----------E----------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKR  241 (272)
Q Consensus       183 sS~~~~~~~~-----------~----------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
                      ++.......+           +          +++|+.|++++||+||+|+||+|+|+|....                .
T Consensus       151 s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~----------------~  214 (250)
T d1yo6a1         151 SSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN----------------A  214 (250)
T ss_dssp             CCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred             ccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC----------------C
Confidence            8753322110           1          7899999999999999999999999986321                1


Q ss_pred             CCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          242 AGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ..+|+|.++.++..+... ....+|..++.|
T Consensus       215 ~~~~e~~a~~~~~~~~~~-~~~~sG~f~~~~  244 (250)
T d1yo6a1         215 ALTVEQSTAELISSFNKL-DNSHNGRFFMRN  244 (250)
T ss_dssp             ----HHHHHHHHHHHTTC-CGGGTTCEEETT
T ss_pred             CCCHHHHHHHHHHHHhcC-CCCCCeEEECCC
Confidence            236889999998888776 567889988765

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-36  Score=249.65  Aligned_cols=204  Identities=17%  Similarity=0.201  Sum_probs=171.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +||+||||||++|||+++|++|+++|++|++++++...                 .........+|..+.++++.+...+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~   63 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE-----------------EASASVIVKMTDSFTEQADQVTAEV   63 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT-----------------TSSEEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc-----------------cccccceeecccCcHHHHHHHHHHH
Confidence            58999999999999999999999999999999987543                 2233456678888888888888888


Q ss_pred             HHhcC--CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-----
Q 039897          121 VNAYG--KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       121 ~~~~g--~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-----  193 (272)
                      .+.++  ++|+||||||.......+.+.+.++|++++++|+.+.+++++.++|+|+++|+||++||.++..+.+.     
T Consensus        64 ~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~  143 (236)
T d1dhra_          64 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYG  143 (236)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHH
T ss_pred             HHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccH
Confidence            77654  69999999997655566777888999999999999999999999999999999999999998877765     


Q ss_pred             ---------HHHHHHHHh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCC
Q 039897          194 ---------ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSS  262 (272)
Q Consensus       194 ---------~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  262 (272)
                               +++||.|++  ++||+||+|+||+++|+|.....+         .....+..+|+++|+.+.+|+++. ..
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~~pe~va~~~~~l~s~~-~~  213 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP---------EADFSSWTPLEFLVETFHDWITGN-KR  213 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST---------TSCGGGSEEHHHHHHHHHHHHTTT-TC
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc---------cchhhcCCCHHHHHHHHHHHhCCC-cc
Confidence                     788999988  579999999999999998532221         123345567999999999999988 88


Q ss_pred             cccceeecc
Q 039897          263 YITGQVLHP  271 (272)
Q Consensus       263 ~~tG~~i~i  271 (272)
                      ++||+.|.+
T Consensus       214 ~i~G~~i~v  222 (236)
T d1dhra_         214 PNSGSLIQV  222 (236)
T ss_dssp             CCTTCEEEE
T ss_pred             CCCCCeEEE
Confidence            999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.3e-35  Score=244.62  Aligned_cols=207  Identities=29%  Similarity=0.394  Sum_probs=171.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|++|||||++|||+++|++|+++|++|++++|+.+                   ..+...+++|+++......+.....
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------------------~~~~~~~~~d~~~~~~~~~~~~~~~   61 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------------GEDLIYVEGDVTREEDVRRAVARAQ   61 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------------SSSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-------------------cccceEeeccccchhhhHHHHHhhh
Confidence            589999999999999999999999999999999742                   3456788999999999999988887


Q ss_pred             HhcCCccEEEEcccccCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc------cc--CCeEEEecCCCCccC
Q 039897          122 NAYGKIDILVNNAAVQYK---AGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM------NE--GSAIINTTSVEPLWH  190 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~------~~--~g~iv~vsS~~~~~~  190 (272)
                      ... ..+.+++++++...   .......+.+.|++.+++|+.+.+.+++.+.+.+      ++  .|+||++||..+..+
T Consensus        62 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  140 (241)
T d1uaya_          62 EEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG  140 (241)
T ss_dssp             HHS-CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC
T ss_pred             ccc-cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC
Confidence            765 45556666654322   2455667889999999999999999999998874      22  489999999988777


Q ss_pred             Chh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCC-CCCCCCccchhhhhhhh
Q 039897          191 SPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP-MKRAGQPIEVAPCYVFL  255 (272)
Q Consensus       191 ~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~L  255 (272)
                      .+.              ++++|.|++++|||||+|+||+|+|++..... .+..+.+....| .+|+.+|+|||++++||
T Consensus       141 ~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~~~R~g~pedvA~~v~fL  219 (241)
T d1uaya_         141 QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP-EKAKASLAAQVPFPPRLGRPEEYAALVLHI  219 (241)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC-HHHHHHHHTTCCSSCSCCCHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh-hhHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            655              79999999999999999999999999876544 333444444445 48999999999999999


Q ss_pred             hccCCCCcccceeeccC
Q 039897          256 ACNHCSSYITGQVLHPN  272 (272)
Q Consensus       256 ~s~~~~~~~tG~~i~id  272 (272)
                      +|+   .|+|||+|.+|
T Consensus       220 ~s~---~~iTG~~i~VD  233 (241)
T d1uaya_         220 LEN---PMLNGEVVRLD  233 (241)
T ss_dssp             HHC---TTCCSCEEEES
T ss_pred             HhC---CCCCCCEEEEC
Confidence            983   49999999998

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.3e-34  Score=241.94  Aligned_cols=220  Identities=28%  Similarity=0.467  Sum_probs=174.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC----hHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF----DENCKRVVD  118 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~~  118 (272)
                      .++|||||++|||+++|++|+++|++|++++|+.++.  .++..+++...   ...+...+.+|+.+    ++.+.++++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA--AQRLVAELNAA---RAGSAVLCKGDLSLSSSLLDCCEDIID   76 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHHHHHHHHH---STTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHHHhh---cCCceEEEecccccchhHHHHHHHHHH
Confidence            3899999999999999999999999999999985432  33334444332   45666666665544    567888888


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCc-----------ccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-------CCeEE
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSV-----------EEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-------GSAII  180 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~-----------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-------~g~iv  180 (272)
                      .+.+++|++|++|||||+..+ .++           .......+...+..|+.+.+...+...+.+..       .+.++
T Consensus        77 ~~~~~~g~iDilvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (266)
T d1mxha_          77 CSFRAFGRCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV  155 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred             HHHHHhCCCCEEEECCccCCC-Ccccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccch
Confidence            899999999999999998543 222           22334567788899999999999988888743       35678


Q ss_pred             EecCCCCccCChh--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCC-CCc
Q 039897          181 NTTSVEPLWHSPE--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRA-GQP  245 (272)
Q Consensus       181 ~vsS~~~~~~~~~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~  245 (272)
                      ++++..+....+.              ++++|.|++++|||||+|+||+++|++.   ..++..+.+.+.+|+++. .+|
T Consensus       156 ~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~---~~~~~~~~~~~~~pl~r~~~~p  232 (266)
T d1mxha_         156 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA---MPQETQEEYRRKVPLGQSEASA  232 (266)
T ss_dssp             EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS---SCHHHHHHHHTTCTTTSCCBCH
T ss_pred             hhhhccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc---CCHHHHHHHHhcCCCCCCCCCH
Confidence            8888776655544              7899999999999999999999999864   346667778888898765 799


Q ss_pred             cchhhhhhhhhccCCCCcccceeeccC
Q 039897          246 IEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       246 ~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      +|+|++++||+|++ +.++|||+|.+|
T Consensus       233 eeva~~v~fL~s~~-s~~itG~~i~vD  258 (266)
T d1mxha_         233 AQIADAIAFLVSKD-AGYITGTTLKVD  258 (266)
T ss_dssp             HHHHHHHHHHHSGG-GTTCCSCEEEES
T ss_pred             HHHHHHHHHHhCch-hCCccCCeEEEC
Confidence            99999999999998 899999999998

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-34  Score=242.33  Aligned_cols=175  Identities=21%  Similarity=0.214  Sum_probs=155.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.   +++..+++...   .+..+..+.+|+++.+.+..+++.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~---l~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~   85 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKET---LQKVVSHCLEL---GAASAHYIAGTMEDMTFAEQFVAQ   85 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHHHH---TCSEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHhhh---hcccchhhhhhhhhHHHHHHHHHH
Confidence            999999999999999999999999999999999998544   44444443321   566788899999999999999999


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-CCeEEEecCCCCccCChh-----
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-GSAIINTTSVEPLWHSPE-----  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~g~iv~vsS~~~~~~~~~-----  193 (272)
                      +.+.+|.+|++|||||... ..++.+.+.++|++++++|+.+++++++.++|+|++ +|+||++||.++..+.+.     
T Consensus        86 ~~~~~g~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~  164 (269)
T d1xu9a_          86 AGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYS  164 (269)
T ss_dssp             HHHHHTSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHH
T ss_pred             HHHHhCCcccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHH
Confidence            9999999999999999854 578888999999999999999999999999999976 689999999999888776     


Q ss_pred             ---------HHHHHHHHhh--CCeEEEEEecccccCCCC
Q 039897          194 ---------ARGLALQLVE--RGIRVNGVAPGPIWTPLI  221 (272)
Q Consensus       194 ---------~~~la~e~~~--~gi~vn~i~PG~v~t~~~  221 (272)
                               +++|+.|++.  .||+||+|+||+|+|+|.
T Consensus       165 asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~  203 (269)
T d1xu9a_         165 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA  203 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH
Confidence                     7899999975  479999999999999875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.6e-34  Score=237.64  Aligned_cols=204  Identities=13%  Similarity=0.164  Sum_probs=165.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .++||||||++|||+++|++|+++|++|++++|+..+.                 ......+.+|+.+.+......+.+.
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~   64 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----------------ADSNILVDGNKNWTEQEQSILEQTA   64 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----------------SSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----------------ccccceeccccCchhHHHHHHHHHH
Confidence            35679999999999999999999999999999985432                 2233456778888888777777777


Q ss_pred             Hh--cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh------
Q 039897          122 NA--YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       122 ~~--~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~------  193 (272)
                      ..  ++++|+||||||+.....++.+...+.|+.++++|+.++++++++++|+|+++|+||++||..+..+.++      
T Consensus        65 ~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~a  144 (235)
T d1ooea_          65 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGM  144 (235)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHH
T ss_pred             HHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHH
Confidence            74  5889999999998654455666667899999999999999999999999999999999999988887766      


Q ss_pred             --------HHHHHHHHh--hCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCc
Q 039897          194 --------ARGLALQLV--ERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSY  263 (272)
Q Consensus       194 --------~~~la~e~~--~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  263 (272)
                              +++|+.|++  +.+|+||+|+||+++|++.....         ...+..++.+|+++++.+++++.+....+
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~---------~~~~~~~~~~~~~va~~~~~~l~~~~~~~  215 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM---------PNADHSSWTPLSFISEHLLKWTTETSSRP  215 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS---------TTCCGGGCBCHHHHHHHHHHHHHCGGGCC
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC---------cCCccccCCCHHHHHHHHHHHhcCccccC
Confidence                    688888987  47899999999999998753221         12234456689999999876555443778


Q ss_pred             ccceeecc
Q 039897          264 ITGQVLHP  271 (272)
Q Consensus       264 ~tG~~i~i  271 (272)
                      +||+.+.+
T Consensus       216 ~tG~~i~v  223 (235)
T d1ooea_         216 SSGALLKI  223 (235)
T ss_dssp             CTTCEEEE
T ss_pred             CCceEEEE
Confidence            99999876

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.98  E-value=6.4e-32  Score=225.81  Aligned_cols=197  Identities=25%  Similarity=0.344  Sum_probs=143.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+||||||++|||+++|++|+++|++|++++|+..+                        ..+|+.+....+.....+..
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------------~~~d~~~~~~~~~~~~~~~~   57 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------VIADLSTAEGRKQAIADVLA   57 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------------EECCTTSHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------------HHHHhcCHHHHHHHHHHHHH
Confidence            799999999999999999999999999999987322                        35688888888877666665


Q ss_pred             hc-CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC--CeEEEecCC--------------
Q 039897          123 AY-GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG--SAIINTTSV--------------  185 (272)
Q Consensus       123 ~~-g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--g~iv~vsS~--------------  185 (272)
                      +. +.+|++|||||+...        .+.|...+.+|..+...+.+.+.+.+.+.  ..+.++.+.              
T Consensus        58 ~~~~~id~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (257)
T d1fjha_          58 KCSKGMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLAL  129 (257)
T ss_dssp             TCTTCCSEEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHH
T ss_pred             HhCCCCcEEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhh
Confidence            54 579999999998432        23357778999999999999988876542  333333332              


Q ss_pred             -------------CCccCCh-h--------------HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHH-HHh-hcc
Q 039897          186 -------------EPLWHSP-E--------------ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEE-SAQ-FGS  235 (272)
Q Consensus       186 -------------~~~~~~~-~--------------~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~-~~~-~~~  235 (272)
                                   .+..+.+ .              ++++|.||+++|||||+|+||+++|++......++. .+. ...
T Consensus       130 ~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  209 (257)
T d1fjha_         130 ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF  209 (257)
T ss_dssp             HHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C
T ss_pred             hccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhc
Confidence                         1111111 0              799999999999999999999999999876554433 233 333


Q ss_pred             CCCCCCCCCccchhhhhhhhhccCCCCcccceeeccC
Q 039897          236 EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHPN  272 (272)
Q Consensus       236 ~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~id  272 (272)
                      ..|++|+.+|+|||+++.||+|+. +.++|||+|.+|
T Consensus       210 ~~PlgR~g~p~eva~~v~fL~S~~-s~~itG~~i~vD  245 (257)
T d1fjha_         210 VPPMGRRAEPSEMASVIAFLMSPA-ASYVHGAQIVID  245 (257)
T ss_dssp             CCSTTSCCCTHHHHHHHHHHTSGG-GTTCCSCEEEES
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCch-hCCccCceEEeC
Confidence            479999999999999999999998 999999999998

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=3.6e-29  Score=209.42  Aligned_cols=205  Identities=19%  Similarity=0.201  Sum_probs=162.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++++|||||++|||+++|++|+++|+ +|++++|+..+.+..++..+++..    .+.++.++.||++|.++++++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA----LGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH----TTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh----ccccccccccccchHHHHHHhhccc
Confidence            46999999999999999999999999 589999987777777777777765    5778999999999999999999987


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  193 (272)
                      .+. +.+|.||||+|... ..++.+.+.++|+.++++|+.+.+++.+.+.+  .+.++||++||.++..+.++       
T Consensus        85 ~~~-~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~SS~a~~~g~~~~~~YaAa  160 (259)
T d2fr1a1          85 GDD-VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASAFGAPGLGGYAPG  160 (259)
T ss_dssp             CTT-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             ccc-cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeecchhhccCCcccHHHHHH
Confidence            654 68999999999965 47899999999999999999999999887654  34579999999987777655       


Q ss_pred             ---HHHHHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ---ARGLALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ---~~~la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                         ...|+.+++.+|+++++|+||.+.++......   ..+.+..  ......+|+++++.+..++...
T Consensus       161 ka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~---~~~~~~~--~G~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         161 NAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP---VADRFRR--HGVIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECCBC---------------CTT--TTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHhHHHHHHHHHhCCCCEEECCCCcccCCccccch---HHHHHHh--cCCCCCCHHHHHHHHHHHHhCC
Confidence               57889999999999999999998765432211   1111111  1112357899999988888654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=1.5e-17  Score=144.26  Aligned_cols=203  Identities=15%  Similarity=0.061  Sum_probs=132.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch--hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE--EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |+||||||+|-||.+++++|+++|++|++++|....  ...+.....+.    .....++.++++|++|.+++.+.++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP----HTCNPKFHLHYGDLSDTSNLTRILREV   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhh----hhcCCCeEEEEeecCCHHHHHHHHhcc
Confidence            799999999999999999999999999999986432  12222111111    114567899999999999999998864


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcc-ccCCeEEEecCCCCccCChh------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHM-NEGSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~g~iv~vsS~~~~~~~~~------  193 (272)
                           .+|+|+|+|+......     +.++....+++|+.|+.++++++...- ++..++|++||...+.....      
T Consensus        78 -----~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~  147 (357)
T d1db3a_          78 -----QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET  147 (357)
T ss_dssp             -----CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             -----CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCC
Confidence                 6899999999854322     234446678999999999999987653 33468999998653321100      


Q ss_pred             -----------HH----HHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHH-H---h-h---------ccCCCCCCCC
Q 039897          194 -----------AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEES-A---Q-F---------GSEVPMKRAG  243 (272)
Q Consensus       194 -----------~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~-~---~-~---------~~~~~~~~~~  243 (272)
                                 ++    .+..++.+ .++.+..+.|+.+..|........... .   . .         ........+.
T Consensus       148 ~~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~  227 (357)
T d1db3a_         148 TPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (357)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence                       23    33344443 489999999999988754332221111 1   1 0         0111222366


Q ss_pred             CccchhhhhhhhhccC
Q 039897          244 QPIEVAPCYVFLACNH  259 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~  259 (272)
                      ..+|++++++.++...
T Consensus       228 ~v~D~~~a~~~~~~~~  243 (357)
T d1db3a_         228 HAKDYVKMQWMMLQQE  243 (357)
T ss_dssp             EHHHHHHHHHHTTSSS
T ss_pred             eechHHHHHHHHHhCC
Confidence            8899999998887543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.7e-16  Score=125.78  Aligned_cols=189  Identities=12%  Similarity=0.058  Sum_probs=124.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |..|+|+||||+|.||++++++|+++|++|.++.|++.+....             ...++.++.+|+++.+++.+.++ 
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~~gD~~d~~~l~~al~-   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------------GPRPAHVVVGDVLQAADVDKTVA-   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------------SCCCSEEEESCTTSHHHHHHHHT-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-------------cccccccccccccchhhHHHHhc-
Confidence            4568999999999999999999999999999999986553211             34668899999999998877764 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~------  193 (272)
                            +.|+||+++|.....   ...         +++..+..++++++...  .-.++|++||.......+.      
T Consensus        67 ------~~d~vi~~~g~~~~~---~~~---------~~~~~~~~~l~~aa~~~--~v~r~i~~ss~~~~~~~~~~~~~~~  126 (205)
T d1hdoa_          67 ------GQDAVIVLLGTRNDL---SPT---------TVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQ  126 (205)
T ss_dssp             ------TCSEEEECCCCTTCC---SCC---------CHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGH
T ss_pred             ------CCCEEEEEeccCCch---hhh---------hhhHHHHHHHHHHHHhc--CCCeEEEEeeeeccCCCcccccccc
Confidence                  689999999874321   111         23344555555554331  1258999998654333221      


Q ss_pred             ----HHH-HHHHHhhCCeEEEEEecccccCCCCCCCCCHHHHHhhccCCCCCCCCCccchhhhhhhhhccCCCCccccee
Q 039897          194 ----ARG-LALQLVERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNHCSSYITGQV  268 (272)
Q Consensus       194 ----~~~-la~e~~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~  268 (272)
                          .+. ....+...|++...|.||.+.........     ...........+.+.+|+|+.++..+.++   ...|+.
T Consensus       127 ~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~DvA~~~~~~l~~~---~~~g~~  198 (205)
T d1hdoa_         127 AVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAY-----TVTLDGRGPSRVISKHDLGHFMLRCLTTD---EYDGHS  198 (205)
T ss_dssp             HHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCCSCC-----EEESSSCSSCSEEEHHHHHHHHHHTTSCS---TTTTCE
T ss_pred             ccchHHHHHHHHHHhcCCceEEEecceecCCCCcccE-----EEeeCCCCCCCcCCHHHHHHHHHHHhCCC---CCCCEE
Confidence                111 12335567999999999988543221110     01111122233457899999999998765   234776


Q ss_pred             ec
Q 039897          269 LH  270 (272)
Q Consensus       269 i~  270 (272)
                      +.
T Consensus       199 ~~  200 (205)
T d1hdoa_         199 TY  200 (205)
T ss_dssp             EE
T ss_pred             Ee
Confidence            64

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.67  E-value=3.5e-17  Score=129.72  Aligned_cols=114  Identities=18%  Similarity=0.172  Sum_probs=91.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..+|+||++|||||++|||+++++.|+++|++|++++|+.++   +.+..+++.+     ..++.+..+|+++.++++++
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~   89 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDK---AQAAADSVNK-----RFKVNVTAAETADDASRAEA   89 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHHH-----HHTCCCEEEECCSHHHHHHH
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHH---HHHHHHHHHh-----ccchhhhhhhcccHHHHHHH
Confidence            468999999999999999999999999999999999999544   4444444432     23455788999999888776


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSL  170 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  170 (272)
                      +       +++|+||||||+..     ...+.++|+..+.+|+.+.+++...+.
T Consensus        90 ~-------~~iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~  131 (191)
T d1luaa1          90 V-------KGAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLG  131 (191)
T ss_dssp             T-------TTCSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCS
T ss_pred             h-------cCcCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHH
Confidence            5       57999999999742     346899999999999988877665443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=3.5e-16  Score=134.44  Aligned_cols=159  Identities=14%  Similarity=0.123  Sum_probs=115.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|-||++++++|+++|++|++++|-...........+.+      ...++.++++|++|.+.+.++++.    
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~l~~~~~~----   71 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL------GGKHPTFVEGDIRNEALMTEILHD----   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH------HTSCCEEEECCTTCHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh------cCCCCEEEEeecCCHHHHHHHHhc----
Confidence            5999999999999999999999999999987544433333333222      345789999999999999888875    


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----------
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----------  193 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  193 (272)
                       .++|+|||+|+....     ..+.++....+++|+.|+.++++++...-  -.++|++||.+.+...+.          
T Consensus        72 -~~~d~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~  143 (338)
T d1udca_          72 -HAIDTVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGDQPKIPYVESFPTG  143 (338)
T ss_dssp             -TTCSEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCCSSSBCTTSCCC
T ss_pred             -cCCCEEEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHhC--CCEEEecCcceEEccccccccccccccC
Confidence             369999999986321     12334456889999999999999997652  248999999765533222          


Q ss_pred             --------H----HHHHHHHh--hCCeEEEEEecccccCCC
Q 039897          194 --------A----RGLALQLV--ERGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       194 --------~----~~la~e~~--~~gi~vn~i~PG~v~t~~  220 (272)
                              .    ..+..++.  ..++.+..+.|+.+..+.
T Consensus       144 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         144 TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCC
T ss_pred             CCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEecc
Confidence                    2    22222222  247899889998887653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=6.1e-15  Score=128.99  Aligned_cols=168  Identities=14%  Similarity=0.100  Sum_probs=115.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc-------------hhhhHHHHHHHHHHhhhcCCCCceEEeccCC
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ-------------EEKDAQETLEILREAKTSDAKDPMAISADLG  108 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (272)
                      |++||||||+|-||.+++++|++.|++|+++|.-.+             ......+.+.....   ....++.++.+|++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~Dl~   77 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA---LTGKSIELYVGDIC   77 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH---HHCCCCEEEESCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHh---hcCCCcEEEEccCC
Confidence            789999999999999999999999999999862100             01111111221111   13567899999999


Q ss_pred             ChHHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          109 FDENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                      |.+.++++++..     .+|+|+|.|+...  .+....+.+.....+.+|+.|+.++++++... .....+++.||...+
T Consensus        78 d~~~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~~i~~ss~~~~  149 (393)
T d1i24a_          78 DFEFLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMGEY  149 (393)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGG
T ss_pred             CHHHHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHh-ccccceeeccccccc
Confidence            999999998864     6999999998743  23334566777888999999999999988754 223467777765432


Q ss_pred             cCC-------------------------h---h--HHHHHHH----Hh-hCCeEEEEEecccccCCC
Q 039897          189 WHS-------------------------P---E--ARGLALQ----LV-ERGIRVNGVAPGPIWTPL  220 (272)
Q Consensus       189 ~~~-------------------------~---~--~~~la~e----~~-~~gi~vn~i~PG~v~t~~  220 (272)
                      ...                         |   .  ++.++..    +. ..++++..+.|+.+..+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVK  216 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCC
Confidence            210                         0   1  3333332    22 458999999998887654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.60  E-value=5.4e-16  Score=134.57  Aligned_cols=208  Identities=13%  Similarity=0.055  Sum_probs=134.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|-||++++++|++.|+.|+++.++......... +..+     ....++.++.+|++|...+..+++..   
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~-~~~~-----~~~~~~~~~~~Dl~d~~~l~~~~~~~---   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDI-----SESNRYNFEHADICDSAEITRIFEQY---   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG-GTTT-----TTCTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHH-HHhh-----hhcCCcEEEEccCCCHHHHHHHHHhC---
Confidence            69999999999999999999999986554433221111110 1111     13557889999999999998888753   


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc-------CCeEEEecCCCCccCCh----
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE-------GSAIINTTSVEPLWHSP----  192 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-------~g~iv~vsS~~~~~~~~----  192 (272)
                        .+|+|||+|+....     ..+.++....+++|+.|+.++.+.+......       ..++|++||.+.+....    
T Consensus        73 --~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (361)
T d1kewa_          73 --QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             --CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCc
Confidence              69999999987431     1223444678999999999999988765322       35899999976443211    


Q ss_pred             ----------------------h-HH----HHHHHHhh-CCeEEEEEecccccCCCCCCC-CCHHHHHhhcc--------
Q 039897          193 ----------------------E-AR----GLALQLVE-RGIRVNGVAPGPIWTPLIPSS-FSEEESAQFGS--------  235 (272)
Q Consensus       193 ----------------------~-~~----~la~e~~~-~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~--------  235 (272)
                                            + ++    .+...+.+ .|+.+..+.|+.|..|..... .-.........        
T Consensus       146 ~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g  225 (361)
T d1kewa_         146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred             cccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeC
Confidence                                  0 22    33333332 489999999999988754221 11122111111        


Q ss_pred             -CCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          236 -EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       236 -~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                       ....+.+...+|+|++++.++...    ..|++++|
T Consensus       226 ~g~~~r~~i~v~D~a~ai~~~~~~~----~~~~~~Ni  258 (361)
T d1kewa_         226 KGDQIRDWLYVEDHARALHMVVTEG----KAGETYNI  258 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEE
T ss_pred             CCCeEEeCEEHHHHHHHHHHHHhcC----CCCCeEEE
Confidence             112223568899999999988654    22555554

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.60  E-value=5.1e-15  Score=127.24  Aligned_cols=127  Identities=16%  Similarity=0.073  Sum_probs=93.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -+||+||||||+|-||.+++++|+++|++|+++.|+..+...+.+......     .......+..|+++.+++.+++. 
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-----PGRFETAVVEDMLKQGAYDEVIK-   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-----TTTEEEEECSCTTSTTTTTTTTT-
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccc-----cccccEEEeccccchhhhhhhcc-
Confidence            458999999999999999999999999999999998655444444332211     23334457789999987776653 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                            ..|.++|+++....     ..+.   ...+..|+.|+.++++.+... +.-.++|++||...
T Consensus        83 ------~~~~v~~~a~~~~~-----~~~~---~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~  135 (342)
T d1y1pa1          83 ------GAAGVAHIASVVSF-----SNKY---DEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVS  135 (342)
T ss_dssp             ------TCSEEEECCCCCSC-----CSCH---HHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGG
T ss_pred             ------cchhhhhhcccccc-----cccc---cccccchhhhHHHHHHhhhcc-ccccccccccccee
Confidence                  68999999987432     1222   455778999999999988764 22358999999643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.4e-14  Score=124.41  Aligned_cols=210  Identities=10%  Similarity=0.006  Sum_probs=135.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc------cchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVK------SQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      |+||||||+|-||.+++++|+++|++|+++++.      ........+....+      ...++.++.+|++|.+.+.+.
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~l~~~   76 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL------TGRSVEFEEMDILDQGALQRL   76 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH------HTCCCEEEECCTTCHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh------cCCCcEEEEeecccccccccc
Confidence            788999999999999999999999999998742      11122222222222      356789999999999998887


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---  193 (272)
                      +..     ..+++++|+|+....     ....++....+++|+.++.+++.++...-.  .++++.||...+.....   
T Consensus        77 ~~~-----~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v--~~~i~~ss~~~~~~~~~~~~  144 (346)
T d1ek6a_          77 FKK-----YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKAHGV--KNLVFSSSATVYGNPQYLPL  144 (346)
T ss_dssp             HHH-----CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEGGGGCSCSSSSB
T ss_pred             ccc-----cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhhcCc--ccccccccceeeeccccccc
Confidence            764     478899999997432     123344567889999999999998865422  37889888644433221   


Q ss_pred             ---------------HH----HHHHHHhh--CCeEEEEEecccccCCCCCC-------CCC----HHHHH-hhcc-----
Q 039897          194 ---------------AR----GLALQLVE--RGIRVNGVAPGPIWTPLIPS-------SFS----EEESA-QFGS-----  235 (272)
Q Consensus       194 ---------------~~----~la~e~~~--~gi~vn~i~PG~v~t~~~~~-------~~~----~~~~~-~~~~-----  235 (272)
                                     .+    ....++.+  .++....+.|+.+..+....       ...    ..... ....     
T Consensus       145 ~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  224 (346)
T d1ek6a_         145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN  224 (346)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEE
T ss_pred             cccccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEE
Confidence                           12    22333332  58888888887776543211       011    11111 1111     


Q ss_pred             ----------CCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          236 ----------EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       236 ----------~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                                ....+.+.+.+|+|.++..++... .....|+++++
T Consensus       225 i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~-~~~~~~~i~Ni  269 (346)
T d1ek6a_         225 VFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKL-KEQCGCRIYNL  269 (346)
T ss_dssp             EECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHH-TTTCCEEEEEE
T ss_pred             EcCCcccCCCCCeeEeEEEEEeccchhhhhcccc-ccccCceEEEe
Confidence                      111223678899998888776544 44455666654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=1.7e-14  Score=124.01  Aligned_cols=129  Identities=21%  Similarity=0.182  Sum_probs=97.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+||||||+|-||++++++|+++|++|+++++............+.+      ...++.++.+|++|.++++.++..   
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~~---   72 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL------TKHHIPFYEVDLCDRKGLEKVFKE---   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH------HTSCCCEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh------cccCCeEEEeecCCHHHHHHHHhc---
Confidence            78999999999999999999999999999976433322222222222      356788999999999999988874   


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCcc
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLW  189 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~  189 (272)
                        -++|+|||+|+.....     ...+.-.....+|+.++.++++++...-.  .++|++||...+.
T Consensus        73 --~~~d~VihlAa~~~~~-----~~~~~~~~~~~~N~~~t~~ll~~~~~~~i--~~~i~~SS~~vyg  130 (347)
T d1z45a2          73 --YKIDSVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQQYNV--SKFVFSSSATVYG  130 (347)
T ss_dssp             --SCCCEEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEGGGGC
T ss_pred             --cCCCEEEEcccccccc-----ccccCcccccccchhhhHHHHHHHHhccc--ceEEeecceeeec
Confidence              2799999999974321     12334466788999999999999875432  3899999976543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.57  E-value=1.2e-14  Score=117.63  Aligned_cols=200  Identities=11%  Similarity=-0.022  Sum_probs=127.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeE--EEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATV--AFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v--~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++||||||+|.||++++++|+++|+.|  +.+.|++++.   .       .    ...++.++.+|+++.+++.++++  
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~---~-------~----~~~~~~~~~~d~~~~~~~~~~~~--   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK---E-------K----IGGEADVFIGDITDADSINPAFQ--   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH---H-------H----TTCCTTEEECCTTSHHHHHHHHT--
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH---H-------h----ccCCcEEEEeeeccccccccccc--
Confidence            599999999999999999999999764  4445543221   1       1    45678899999999998877764  


Q ss_pred             HHhcCCccEEEEcccccCCCC--------CcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh
Q 039897          121 VNAYGKIDILVNNAAVQYKAG--------SVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP  192 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~--------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~  192 (272)
                           ++|.|||+++......        .........+.....+|+.+..++........  .+...+.++........
T Consensus        68 -----~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~  140 (252)
T d2q46a1          68 -----GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMGGTNPDH  140 (252)
T ss_dssp             -----TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETTTTCTTC
T ss_pred             -----cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc--ccccccccccccCCCCc
Confidence                 6999999998643211        11112223345567889999988888776543  34677777655443322


Q ss_pred             h-----------HHHH-HHHHhhCCeEEEEEecccccCCCCCCCC--CHHHHHhhccCCCCCCCCCccchhhhhhhhhcc
Q 039897          193 E-----------ARGL-ALQLVERGIRVNGVAPGPIWTPLIPSSF--SEEESAQFGSEVPMKRAGQPIEVAPCYVFLACN  258 (272)
Q Consensus       193 ~-----------~~~l-a~e~~~~gi~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  258 (272)
                      .           .+.+ .......|+++..+.||.+..+......  ..... ..  ......+.+.+|+|++++.++..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~--~~~~~~~i~~~Dva~a~~~~l~~  217 (252)
T d2q46a1         141 PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDD-EL--LQTDTKTVPRADVAEVCIQALLF  217 (252)
T ss_dssp             GGGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEEESTT-GG--GGSSCCEEEHHHHHHHHHHHTTC
T ss_pred             ccccccccchhhhhhhhhhhhhcccccceeecceEEECCCcchhhhhhccCc-cc--ccCCCCeEEHHHHHHHHHHHhCC
Confidence            1           1222 2223347899999999998766432110  00000 00  01112345789999999998876


Q ss_pred             CCCCcccceeecc
Q 039897          259 HCSSYITGQVLHP  271 (272)
Q Consensus       259 ~~~~~~tG~~i~i  271 (272)
                      +   ...|++++|
T Consensus       218 ~---~~~g~~~~i  227 (252)
T d2q46a1         218 E---EAKNKAFDL  227 (252)
T ss_dssp             G---GGTTEEEEE
T ss_pred             c---cccCcEEEE
Confidence            5   345777764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=7.8e-15  Score=125.83  Aligned_cols=201  Identities=12%  Similarity=0.060  Sum_probs=131.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +||||||+|-||++++++|+++| ++|+++++.......+.            ...++.++.+|+++.+++.+.+.    
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~------------~~~~~~~i~~Di~~~~~~~~~~~----   65 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------NHPHFHFVEGDISIHSEWIEYHV----   65 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------------TCTTEEEEECCTTTCSHHHHHHH----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc------------cCCCeEEEECccCChHHHHHHHH----
Confidence            69999999999999999999999 58988877644322221            35678999999998876655332    


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                        ..+|+|||+|+.....     ...++....+.+|+.|+.++++++...   +-++++.||...+.....         
T Consensus        66 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~gt~~ll~~~~~~---~~~~~~~ss~~~~~~~~~~~~~~~~~~  135 (342)
T d2blla1          66 --KKCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKYFDEDHSN  135 (342)
T ss_dssp             --HHCSEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred             --hCCCcccccccccccc-----ccccCCccccccccccccccccccccc---ccccccccccccccccccccccccccc
Confidence              1599999999985321     233444678999999999999998643   346677776543322111         


Q ss_pred             ---------------HHHHHHH----Hh-hCCeEEEEEecccccCCCCCCCC------CH---HHHHh---------hcc
Q 039897          194 ---------------ARGLALQ----LV-ERGIRVNGVAPGPIWTPLIPSSF------SE---EESAQ---------FGS  235 (272)
Q Consensus       194 ---------------~~~la~e----~~-~~gi~vn~i~PG~v~t~~~~~~~------~~---~~~~~---------~~~  235 (272)
                                     ++.++.+    +. ..|+.+..+.|..+..+......      ..   .....         ...
T Consensus       136 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  215 (342)
T d2blla1         136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (342)
T ss_dssp             CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             ccccccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCC
Confidence                           3333333    32 24899999998888765432211      11   11111         112


Q ss_pred             CCCCCCCCCccchhhhhhhhhccCCCCcccceeecc
Q 039897          236 EVPMKRAGQPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       236 ~~~~~~~~~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      ....+.+...+|+++++..++... .....|+++++
T Consensus       216 g~~~r~~i~v~D~~~a~~~~~~~~-~~~~~g~~~Ni  250 (342)
T d2blla1         216 GKQKRCFTDIRDGIEALYRIIENA-GNRCDGEIINI  250 (342)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCG-GGTTTTEEEEE
T ss_pred             CCeeeeecccccccceeeeehhhc-cccCCCeEEEE
Confidence            222334678999999999998764 33455777765

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.2e-14  Score=118.23  Aligned_cols=194  Identities=12%  Similarity=0.024  Sum_probs=128.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      +..+|++|+||||||||.||++++++|.++|.  +|++++|++......             ....+....+|+.+.+++
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-------------~~~~i~~~~~D~~~~~~~   74 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------------AYKNVNQEVVDFEKLDDY   74 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------------GGGGCEEEECCGGGGGGG
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-------------ccceeeeeeecccccccc
Confidence            34668999999999999999999999999996  799999975442211             234566677788776554


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE  193 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~  193 (272)
                      ...       +.+.|++||++|...        .........++|+.++.++.+.+...-  -.++|++|+.........
T Consensus        75 ~~~-------~~~~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~~--v~~fi~~Ss~~~~~~~~~  137 (232)
T d2bkaa1          75 ASA-------FQGHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLSSKGADKSSNF  137 (232)
T ss_dssp             GGG-------GSSCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCCTTCSS
T ss_pred             ccc-------ccccccccccccccc--------cccchhhhhhhcccccceeeecccccC--ccccccCCccccccCccc
Confidence            433       357999999998632        233445567889999999999886532  347999999876654333


Q ss_pred             ----HHHHHHHHh-hCCe-EEEEEecccccCCCCCCCCCHHHHHhhccCCC----CCCCCCccchhhhhhhhhccC
Q 039897          194 ----ARGLALQLV-ERGI-RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVP----MKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ----~~~la~e~~-~~gi-~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~L~s~~  259 (272)
                          .+..+.+.- +.+. ++..+.||.+..+.............+....+    .....+.+|+|.+++..+..+
T Consensus       138 ~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~  213 (232)
T d2bkaa1         138 LYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRP  213 (232)
T ss_dssp             HHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             hhHHHHHHhhhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcC
Confidence                444444433 3455 57788999997764322111111122212211    222346689999988887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=4.2e-14  Score=120.84  Aligned_cols=205  Identities=16%  Similarity=0.037  Sum_probs=130.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch--hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE--EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|++|||||+|-||++++++|+++|++|+.++|....  ...+.........   .....+.++.+|+++.+++...++.
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~~~~~~~~~   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN---VNKALMKLHYADLTDASSLRRWIDV   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh---ccccceEEEEccccCHHHHHHHHhh
Confidence            4899999999999999999999999999999985321  1111111111100   0345677899999999999888875


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhcccc---CCeEEEecCCCCccCChh---
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNE---GSAIINTTSVEPLWHSPE---  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~g~iv~vsS~~~~~~~~~---  193 (272)
                      .     ++|+|||+|+.....     ...++....+..|+.+..+++.++.....+   ..++++.||.........   
T Consensus        78 ~-----~~D~Vih~Aa~~~~~-----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~  147 (339)
T d1n7ha_          78 I-----KPDEVYNLAAQSHVA-----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQS  147 (339)
T ss_dssp             H-----CCSEEEECCSCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBC
T ss_pred             h-----ccchhhhcccccccc-----ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCC
Confidence            3     799999999874321     233455778899999999998887644322   235666666432222111   


Q ss_pred             -----------------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCCCHHHH------Hhhcc--------CCCCCC
Q 039897          194 -----------------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFSEEES------AQFGS--------EVPMKR  241 (272)
Q Consensus       194 -----------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~~~~~------~~~~~--------~~~~~~  241 (272)
                                       +..++..+.+ +++.+..+.|+.|..|...........      .....        ......
T Consensus       148 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd  227 (339)
T d1n7ha_         148 ETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  227 (339)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             CCCCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccc
Confidence                             2333333333 589999999999888764333221111      11111        112223


Q ss_pred             CCCccchhhhhhhhhccC
Q 039897          242 AGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~  259 (272)
                      +...+|++.++..++..+
T Consensus       228 ~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         228 WGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             CEEHHHHHHHHHHHHTSS
T ss_pred             ceeeehHHHHHHHHHhcC
Confidence            567899999999888765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.55  E-value=2.7e-14  Score=121.65  Aligned_cols=123  Identities=15%  Similarity=0.093  Sum_probs=90.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|-||++++++|+++|++|+++++-.....  .+....+.     ...++.++.+|+++.+++.++++..   
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~--~~~~~~~~-----~~~~~~~i~~Di~~~~~l~~~~~~~---   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLS-----SLGNFEFVHGDIRNKNDVTRLITKY---   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHH-----TTCCCEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc--hhHHHHhh-----ccCCcEEEEcccCCHHHHHHHHHhc---
Confidence            6899999999999999999999999999875322211  11122222     4678899999999999999888754   


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        ++|+|||+|+....     ....++....+++|+.|+.++++++...  ...+.++++|.
T Consensus        72 --~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~i~~sS~  124 (338)
T d1orra_          72 --MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQY--NSNCNIIYSST  124 (338)
T ss_dssp             --CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEE
T ss_pred             --CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhcc--ccccccccccc
Confidence              69999999987432     1233455788999999999999987653  22344444443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=1.9e-14  Score=123.50  Aligned_cols=213  Identities=13%  Similarity=0.030  Sum_probs=136.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++-|++|||||+|.||++++++|.++|++|+++++.........+....+...  ....++.++.+|..|........  
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~d~~~~~~~~--   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSE--KQWSNFKFIQGDIRNLDDCNNAC--   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCH--HHHTTEEEEECCTTSHHHHHHHH--
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhh--cccCCeeEEeecccccccccccc--
Confidence            45689999999999999999999999999999987443322222222211110  02346788999999877655443  


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~------  193 (272)
                           ...+.++|.++....     ....++....+++|+.|+.++++++...-  -.++|++||.+.+...+.      
T Consensus        90 -----~~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~--~~~~i~~SS~~vyg~~~~~~~~E~  157 (341)
T d1sb8a_          90 -----AGVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTYGDHPGLPKVED  157 (341)
T ss_dssp             -----TTCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             -----ccccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhcC--CceEEEcccceeeCCCCCCCccCC
Confidence                 368889888876322     12456677889999999999999997642  348999999865543222      


Q ss_pred             -----------HHH----HHHHHh-hCCeEEEEEecccccCCCCCCCC--C---HHHHHhh---------ccCCCCCCCC
Q 039897          194 -----------ARG----LALQLV-ERGIRVNGVAPGPIWTPLIPSSF--S---EEESAQF---------GSEVPMKRAG  243 (272)
Q Consensus       194 -----------~~~----la~e~~-~~gi~vn~i~PG~v~t~~~~~~~--~---~~~~~~~---------~~~~~~~~~~  243 (272)
                                 ++.    +...+. ..++++..+.|+.+..+......  .   .......         ....+...+.
T Consensus       158 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i  237 (341)
T d1sb8a_         158 TIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  237 (341)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEE
Confidence                       232    333333 24799999999988766432211  1   1111111         1112233466


Q ss_pred             CccchhhhhhhhhccCCCCcccceeec
Q 039897          244 QPIEVAPCYVFLACNHCSSYITGQVLH  270 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~~~~~~tG~~i~  270 (272)
                      ..+|++.++..++...  ....|+.++
T Consensus       238 ~v~D~~~a~~~~~~~~--~~~~~~~~~  262 (341)
T d1sb8a_         238 YIENTVQANLLAATAG--LDARNQVYN  262 (341)
T ss_dssp             EHHHHHHHHHHHHTCC--GGGCSEEEE
T ss_pred             EEeccchhhhhhhhcc--ccccceeee
Confidence            7789999988877543  223455554

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=7.2e-14  Score=119.81  Aligned_cols=204  Identities=14%  Similarity=0.035  Sum_probs=131.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch--hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE--EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |++|||||+|-||.+++++|.++|++|+.++|....  ...+........   .....++.++.+|++|.+.+..++...
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQ---AHIEGNMKLHYGDLTDSTCLVKIINEV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC------------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchh---hhccCCcEEEEeecCCchhhHHHHhhc
Confidence            444999999999999999999999999999996532  111111111110   013457889999999999999988764


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccc-cCCeEEEecCCCCccCChh------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMN-EGSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~g~iv~vsS~~~~~~~~~------  193 (272)
                           .+++++|+++....     ....+.....+++|+.|+.++++++...-. +..++|++||.+.+.....      
T Consensus        79 -----~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          79 -----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             -----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             -----ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC
Confidence                 68899998876421     123445566789999999999998876543 3458999998754432111      


Q ss_pred             -----------HHHHHH----HH-hhCCeEEEEEecccccCCCCCCCCCHHH-----HHhh---------ccCCCCCCCC
Q 039897          194 -----------ARGLAL----QL-VERGIRVNGVAPGPIWTPLIPSSFSEEE-----SAQF---------GSEVPMKRAG  243 (272)
Q Consensus       194 -----------~~~la~----e~-~~~gi~vn~i~PG~v~t~~~~~~~~~~~-----~~~~---------~~~~~~~~~~  243 (272)
                                 ++..+.    ++ ...++.+..+.|+.+..+..........     ....         ........+.
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i  228 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  228 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeee
Confidence                       333333    32 2358999999998887764322221111     1111         1111223466


Q ss_pred             CccchhhhhhhhhccC
Q 039897          244 QPIEVAPCYVFLACNH  259 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~  259 (272)
                      +.+|++.++..++...
T Consensus       229 ~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         229 HAKDYVEAMWLMLQND  244 (347)
T ss_dssp             EHHHHHHHHHHHHHSS
T ss_pred             EecHHHHHHHHHhhcC
Confidence            8899999999888654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.53  E-value=9.1e-14  Score=119.49  Aligned_cols=127  Identities=19%  Similarity=0.135  Sum_probs=97.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++||+||||||+|-||++++++|+++|++|++++|+..+...+.+...        ...++.++.+|++|++.+.++++.
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~i~~~~~Dl~d~~~l~~~~~~   77 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------VADGMQSEIGDIRDQNKLLESIRE   77 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------TTTTSEEEECCTTCHHHHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh--------cccCCeEEEeeccChHhhhhhhhh
Confidence            689999999999999999999999999999999998665444322211        345789999999999998888875


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      .     .+|+++|+|+....     ..+.+.....+.+|+.++.+++.++...- ....+++.|+.
T Consensus        78 ~-----~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~-~~~~~~~~s~~  132 (356)
T d1rkxa_          78 F-----QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSD  132 (356)
T ss_dssp             H-----CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCG
T ss_pred             c-----hhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhccc-ccccccccccc
Confidence            4     79999999987432     22345667789999999999999887632 22345555443

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.52  E-value=6.5e-14  Score=118.79  Aligned_cols=199  Identities=13%  Similarity=0.037  Sum_probs=130.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+||||||+|.||++++++|+++|++|+.++|.......  ..++.+.     ...++.++.+|++|...+.+.+...  
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~l~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~--   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG-----IEGDIQYEDGDMADACSVQRAVIKA--   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT-----CGGGEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH--HHHHHhc-----ccCCcEEEEccccChHHhhhhhccc--
Confidence            789999999999999999999999999999987543211  1111111     3456889999999999888887764  


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                         ..++++|+++.....     ...++....++.|+.|+.+++.++... ....++++.||...+.....         
T Consensus        72 ---~~~~~~~~a~~~~~~-----~~~~~~~~~~~~n~~g~~~~l~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~  142 (321)
T d1rpna_          72 ---QPQEVYNLAAQSFVG-----ASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQAERQDENTPF  142 (321)
T ss_dssp             ---CCSEEEECCSCCCHH-----HHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             ---ccccccccccccccc-----ccccchHHHHhhhhhchHHHHHHHHHh-CCCcccccccchhhcCcccCCCCCCCCCc
Confidence               678888888764321     122334677899999999999988654 22346777777543211111         


Q ss_pred             --------H----HHHHHHHh-hCCeEEEEEecccccCCCCCCCCCHHH----H-H-hhccC--------CCCCCCCCcc
Q 039897          194 --------A----RGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSEEE----S-A-QFGSE--------VPMKRAGQPI  246 (272)
Q Consensus       194 --------~----~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~~~----~-~-~~~~~--------~~~~~~~~~~  246 (272)
                              +    ..+..++. .+++++..+.|+.+..|..........    . . .....        .+.+.+...+
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~  222 (321)
T d1rpna_         143 YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG  222 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred             cccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeH
Confidence                    2    23333333 358999999998887775332221111    1 1 11111        1122356889


Q ss_pred             chhhhhhhhhccC
Q 039897          247 EVAPCYVFLACNH  259 (272)
Q Consensus       247 dva~~~~~L~s~~  259 (272)
                      |++++++.++..+
T Consensus       223 D~~~~~~~~~~~~  235 (321)
T d1rpna_         223 DYVEAMWLMLQQD  235 (321)
T ss_dssp             HHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999988654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.51  E-value=4.2e-14  Score=122.20  Aligned_cols=193  Identities=17%  Similarity=0.047  Sum_probs=128.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++++||||||+|-||++++++|.++|++|+++++........             ......+..+|+.+.+.+.++++  
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~-------------~~~~~~~~~~D~~~~~~~~~~~~--   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------------DMFCDEFHLVDLRVMENCLKVTE--   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------------GGTCSEEEECCTTSHHHHHHHHT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh-------------hcccCcEEEeechhHHHHHHHhh--
Confidence            456799999999999999999999999999998754331100             23345678889988877665553  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  193 (272)
                           ++|.|||+|+.....    ....+.....+.+|+.++.+++.++...-.  .++|++||...+.....       
T Consensus        79 -----~~d~Vih~a~~~~~~----~~~~~~~~~~~~~n~~gt~~ll~~~~~~~v--k~~i~~SS~~~~~~~~~~~~~~~~  147 (363)
T d2c5aa1          79 -----GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMIEAARINGI--KRFFYASSACIYPEFKQLETTNVS  147 (363)
T ss_dssp             -----TCSEEEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             -----cCCeEeecccccccc----cccccccccccccccchhhHHHHhHHhhCc--cccccccccccccccccccccccc
Confidence                 699999999874321    122334566788999999999999876432  48999999765432110       


Q ss_pred             -----------------H----HHHHHHHhh-CCeEEEEEecccccCCCCCCCCC------HHHHHh---------hccC
Q 039897          194 -----------------A----RGLALQLVE-RGIRVNGVAPGPIWTPLIPSSFS------EEESAQ---------FGSE  236 (272)
Q Consensus       194 -----------------~----~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~~------~~~~~~---------~~~~  236 (272)
                                       +    ..+..++.+ .|+++..+.|+.+..+.......      ......         +...
T Consensus       148 ~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  227 (363)
T d2c5aa1         148 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG  227 (363)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCS
T ss_pred             cccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCC
Confidence                             2    233333333 48999999999887764321110      011111         1111


Q ss_pred             CCCCCCCCccchhhhhhhhhccC
Q 039897          237 VPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       237 ~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      .+.+.+...+|++.++.+++..+
T Consensus       228 ~~~rd~i~v~D~~~~~~~~~~~~  250 (363)
T d2c5aa1         228 LQTRSFTFIDECVEGVLRLTKSD  250 (363)
T ss_dssp             CCEECCEEHHHHHHHHHHHHHSS
T ss_pred             CeEEEEeehhHHHHHHHHHHhCC
Confidence            23445678889999998887543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.48  E-value=1.8e-14  Score=123.87  Aligned_cols=197  Identities=14%  Similarity=0.086  Sum_probs=126.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      -|+||||||+|-||.+++++|+++|+.|.++.++..+.........      .....++.++.+|++|.+.+..++.   
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~------~~~~~~i~~~~~Di~d~~~~~~~~~---   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE------AILGDRVELVVGDIADAELVDKLAA---   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG------GGCSSSEEEEECCTTCHHHHHHHHT---
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHH------HhhcCCeEEEEccCCCHHHHHHHHh---
Confidence            3689999999999999999999999986666554211110000000      1145688999999999988887764   


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh---------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP---------  192 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~---------  192 (272)
                          ..+.++|.|+.....     ....+..+.+++|+.|+.+++..+...   +.+++++||...+...+         
T Consensus        73 ----~~~~v~~~a~~~~~~-----~~~~~~~~~~~~N~~g~~nll~~~~~~---~~k~i~~ss~~vyg~~~~~~~~~~~~  140 (346)
T d1oc2a_          73 ----KADAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLREDLPGHG  140 (346)
T ss_dssp             ----TCSEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred             ----hhhhhhhhhhccccc-----chhhCcccceeeehHhHHhhhhhhccc---cccccccccceEecccCccccccccc
Confidence                688899999874321     122334577899999999999888654   24778887765442210         


Q ss_pred             ------------------h------HHHHHHHHhh-CCeEEEEEecccccCCCCCCCC-CHHHHHh---------hccCC
Q 039897          193 ------------------E------ARGLALQLVE-RGIRVNGVAPGPIWTPLIPSSF-SEEESAQ---------FGSEV  237 (272)
Q Consensus       193 ------------------~------~~~la~e~~~-~gi~vn~i~PG~v~t~~~~~~~-~~~~~~~---------~~~~~  237 (272)
                                        .      +..++..+.+ .|+++..+.|+.+..|...... -......         +....
T Consensus       141 ~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~  220 (346)
T d1oc2a_         141 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK  220 (346)
T ss_dssp             CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred             cCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCC
Confidence                              0      2233334433 5899999999999876432211 1111111         12223


Q ss_pred             CCCCCCCccchhhhhhhhhccC
Q 039897          238 PMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       238 ~~~~~~~~~dva~~~~~L~s~~  259 (272)
                      ..+.+...+|++.+++.++...
T Consensus       221 ~~r~~i~v~D~a~a~~~~~~~~  242 (346)
T d1oc2a_         221 NVRDWIHTNDHSTGVWAILTKG  242 (346)
T ss_dssp             CEEECEEHHHHHHHHHHHHHHC
T ss_pred             ccccccchhhHHHHHHHHHhhc
Confidence            3344668889999988887654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.45  E-value=2.6e-14  Score=121.68  Aligned_cols=201  Identities=10%  Similarity=0.007  Sum_probs=130.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEE------Eeccc--chhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAF------TYVKS--QEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i------~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      +||||||+|-||++++++|+++|+.|..      .+...  .....+..         .....++.++..|.++......
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~d~~~~~~~~~   72 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP---------VDADPRLRFVHGDIRDAGLLAR   72 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG---------GTTCTTEEEEECCTTCHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhh---------hhcCCCeEEEEeccccchhhhc
Confidence            6999999999999999999999986543      32211  11111110         0135678899999999876664


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--  193 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--  193 (272)
                      ..       ..+|.++|+|+....     ..........+++|+.++.++++++...-  -.++|+.||...+.....  
T Consensus        73 ~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~--~~~~I~~Ss~~~yg~~~~~~  138 (322)
T d1r6da_          73 EL-------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSIDSGS  138 (322)
T ss_dssp             HT-------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCSSSC
T ss_pred             cc-------cccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHHcC--CceEEEeecceeecCCCCCC
Confidence            43       479999999987432     12344556778999999999999987542  358999999865543221  


Q ss_pred             ---------------H----HHHHHHHh-hCCeEEEEEecccccCCCCCCC-CCHHHHHhhc--c-------CCCCCCCC
Q 039897          194 ---------------A----RGLALQLV-ERGIRVNGVAPGPIWTPLIPSS-FSEEESAQFG--S-------EVPMKRAG  243 (272)
Q Consensus       194 ---------------~----~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~-~~~~~~~~~~--~-------~~~~~~~~  243 (272)
                                     +    ..+...+. ..|+.+..+.|+.+..+..... .-........  +       ....+.+.
T Consensus       139 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i  218 (322)
T d1r6da_         139 WTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (322)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccE
Confidence                           2    23333333 3589999999999987753221 1111111111  1       11222356


Q ss_pred             CccchhhhhhhhhccCCCCcccceeecc
Q 039897          244 QPIEVAPCYVFLACNHCSSYITGQVLHP  271 (272)
Q Consensus       244 ~~~dva~~~~~L~s~~~~~~~tG~~i~i  271 (272)
                      +.+|+|+++..++...    ..|+++++
T Consensus       219 ~v~D~a~ai~~~~~~~----~~~~~~ni  242 (322)
T d1r6da_         219 HTDDHCRGIALVLAGG----RAGEIYHI  242 (322)
T ss_dssp             EHHHHHHHHHHHHHHC----CTTCEEEE
T ss_pred             EHHHHHHHHHHHHhCC----CCCCeeEE
Confidence            8899999999998765    24666654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.1e-13  Score=117.41  Aligned_cols=189  Identities=15%  Similarity=0.143  Sum_probs=118.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch-hhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE-EKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|+||||||+|-||++++++|+++|++|+++++.... ...+....         ...++.....|+.+     .+    
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~---------~~~~~d~~~~~~~~-----~~----   62 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI---------GHENFELINHDVVE-----PL----   62 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT---------TCTTEEEEECCTTS-----CC----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc---------CCCceEEEehHHHH-----HH----
Confidence            4789999999999999999999999999999864322 11111100         22333444444432     11    


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCC---------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHS---------  191 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~---------  191 (272)
                         +.++|+|||+|+.....  .   ..++..+.+++|+.++.++++++...   +.++|++||.+.+...         
T Consensus        63 ---~~~~d~VihlAa~~~~~--~---~~~~~~~~~~~Nv~g~~~ll~~~~~~---~~k~I~~SS~~vy~~~~~~~~~e~~  131 (312)
T d2b69a1          63 ---YIEVDQIYHLASPASPP--N---YMYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEVHPQSEDY  131 (312)
T ss_dssp             ---CCCCSEEEECCSCCSHH--H---HTTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred             ---HcCCCEEEECcccCCch--h---HHhCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEEChheecCCCCCCCCccc
Confidence               23699999999874321  1   11234567899999999999988653   3489999996544321         


Q ss_pred             --------hh---------HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCC---HHHHHhh---------ccCCCCCC
Q 039897          192 --------PE---------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFS---EEESAQF---------GSEVPMKR  241 (272)
Q Consensus       192 --------~~---------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~---~~~~~~~---------~~~~~~~~  241 (272)
                              |.         +..+..++. .+|+.+..+.|+.|..+.......   +......         ....+...
T Consensus       132 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~  211 (312)
T d2b69a1         132 WGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA  211 (312)
T ss_dssp             CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEE
T ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEc
Confidence                    11         233344433 348999999999998875433211   1111111         11222334


Q ss_pred             CCCccchhhhhhhhhccC
Q 039897          242 AGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       242 ~~~~~dva~~~~~L~s~~  259 (272)
                      +.+.+|++++++.++...
T Consensus       212 ~i~v~D~~~~~~~~~~~~  229 (312)
T d2b69a1         212 FQYVSDLVNGLVALMNSN  229 (312)
T ss_dssp             CEEHHHHHHHHHHHHTSS
T ss_pred             cEEHHHHHHHHHHHHhhc
Confidence            567899999998887543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.39  E-value=1.4e-12  Score=110.12  Aligned_cols=178  Identities=13%  Similarity=0.087  Sum_probs=120.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .|+||||||+|-||++++++|+++|+.|+++++..                           .+|+.+.+.+.++++.  
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------------~~~~~~~~~~~~~~~~--   52 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFAS--   52 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------------hccccCHHHHHHHHhh--
Confidence            57999999999999999999999999988765431                           3588998888887764  


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--------
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--------  193 (272)
                         ..+|.++|+|+....    ......+..+.+++|+.++.+++.++...  +-.++|++||.+.+.....        
T Consensus        53 ---~~~d~v~~~a~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~--~v~~~i~~SS~~vyg~~~~~~~~E~~~  123 (315)
T d1e6ua_          53 ---ERIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAKQPMAESEL  123 (315)
T ss_dssp             ---HCCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCCSSBCGGGT
T ss_pred             ---cCCCEEEEcchhccc----cccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCceEcCCCCCCCccCCcc
Confidence               269999999976432    11234445666889999999999988664  2248999999875542110        


Q ss_pred             --------------HHHHHHH----Hh-hCCeEEEEEecccccCCCCCCCCC-----HHH-----HHh---------hcc
Q 039897          194 --------------ARGLALQ----LV-ERGIRVNGVAPGPIWTPLIPSSFS-----EEE-----SAQ---------FGS  235 (272)
Q Consensus       194 --------------~~~la~e----~~-~~gi~vn~i~PG~v~t~~~~~~~~-----~~~-----~~~---------~~~  235 (272)
                                    ++..+.+    +. ..|+++..+.|+.|..|.......     ...     ...         ...
T Consensus       124 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  203 (315)
T d1e6ua_         124 LQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGS  203 (315)
T ss_dssp             TSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESC
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCC
Confidence                          2333332    22 348999999999998765322111     101     000         111


Q ss_pred             CCCCCCCCCccchhhhhhhhhc
Q 039897          236 EVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       236 ~~~~~~~~~~~dva~~~~~L~s  257 (272)
                      ..+...+...+|++.++..++.
T Consensus       204 g~~~~~~~~v~d~~~~~~~~~~  225 (315)
T d1e6ua_         204 GTPMREFLHVDDMAAASIHVME  225 (315)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHH
T ss_pred             CceEEEEEEeehhHHHHHHhhh
Confidence            2333455677888888877763

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.35  E-value=1.2e-12  Score=104.53  Aligned_cols=183  Identities=15%  Similarity=0.101  Sum_probs=110.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|+||||||||.||++++++|.++|+  +|+...|++..                 ...+   +..+..+..++   .+ 
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-----------------~~~~---~~~~~~d~~~~---~~-   57 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------------EHPR---LDNPVGPLAEL---LP-   57 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------------CCTT---EECCBSCHHHH---GG-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-----------------hccc---ccccccchhhh---hh-
Confidence            48999999999999999999999998  55555554211                 1112   34444443332   11 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh----HH
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE----AR  195 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~----~~  195 (272)
                        ...+.+|.+|+++|.....       ...-....++|+.++.++++++...  .-.+++++||.........    ++
T Consensus        58 --~~~~~~d~vi~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~~i~~Ss~~~~~~~~~~y~~~K  126 (212)
T d2a35a1          58 --QLDGSIDTAFCCLGTTIKE-------AGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADAKSSIFYNRVK  126 (212)
T ss_dssp             --GCCSCCSEEEECCCCCHHH-------HSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTCSSHHHHHH
T ss_pred             --ccccchheeeeeeeeeccc-------cccccccccchhhhhhhcccccccc--cccccccccccccccccccchhHHH
Confidence              2235789999999874211       1112456788999999999987653  2358999999765433322    55


Q ss_pred             HHHHHHh-hCCe-EEEEEecccccCCCCCCCCCHHHHHhhccCCCC-CCCCCccchhhhhhhhhccC
Q 039897          196 GLALQLV-ERGI-RVNGVAPGPIWTPLIPSSFSEEESAQFGSEVPM-KRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       196 ~la~e~~-~~gi-~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~~  259 (272)
                      ..+.+.. ..+. ++..+.|+.+..+..................+. .+..+.+|+|++++.++.++
T Consensus       127 ~~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         127 GELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHhhhccccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            5555443 3455 688899999976643211000000000000000 01246789999999998765

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.35  E-value=7.8e-12  Score=108.53  Aligned_cols=169  Identities=15%  Similarity=0.088  Sum_probs=111.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEeccc------chhhhHHHHHHHHHHhh----hcCCCCceEEeccCCCh
Q 039897           42 GKVALVTGGDSGIGRAVAHCYAL-EGATVAFTYVKS------QEEKDAQETLEILREAK----TSDAKDPMAISADLGFD  110 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~-~G~~v~i~~r~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~  110 (272)
                      +.+||||||+|-||++++++|++ .|++|+++|+-.      ...+........+....    ........++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 689999987411      01111222222222110    01234577889999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC
Q 039897          111 ENCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH  190 (272)
Q Consensus       111 ~~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~  190 (272)
                      +.++++++.    .+++|+|+|+|+.....     ...+.....+++|+.++.+++.++...-.  .+++++++...+..
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~~-----~~~~~~~~~~~~N~~~t~~~l~~~~~~~~--~~~~~~~s~~~~~~  150 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAVG-----ESVRDPLKYYDNNVVGILRLLQAMLLHKC--DKIIFSSSAAIFGN  150 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEGGGTBS
T ss_pred             HHhhhhhhc----cceeehhhccccccccc-----ccccccccccccccccccccchhhhccCC--cccccccccccccc
Confidence            888877764    46799999999974321     23344567788999999999998876433  36776666543321


Q ss_pred             Chh----------------------------HHHHHHHHhh-CCeEEEEEecccccCCCC
Q 039897          191 SPE----------------------------ARGLALQLVE-RGIRVNGVAPGPIWTPLI  221 (272)
Q Consensus       191 ~~~----------------------------~~~la~e~~~-~gi~vn~i~PG~v~t~~~  221 (272)
                      ...                            ...++.++.+ +|+.+.++.|+.+..+..
T Consensus       151 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE  210 (383)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred             cccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCc
Confidence            100                            2334444443 589999999988876543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.30  E-value=8.6e-12  Score=104.42  Aligned_cols=187  Identities=10%  Similarity=0.019  Sum_probs=113.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhh-HHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKD-AQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .++||||||+|.||.+++++|+++|++|+++.|+...... ..+....+      ...++.++.+|+++.+.+.+.+.  
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~------~~~~v~~v~~d~~d~~~~~~~~~--   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF------KQLGAKLIEASLDDHQRLVDALK--   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH------HTTTCEEECCCSSCHHHHHHHHT--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh------ccCCcEEEEeecccchhhhhhcc--
Confidence            4569999999999999999999999999999987543221 12222222      34568899999999888777664  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  193 (272)
                           +.+.++++++....                ..|..+..+++.++...  ...++++.||.........       
T Consensus        75 -----~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a~~~--~~~~~v~~Ss~g~~~~~~~~~~~~~~  131 (312)
T d1qyda_          75 -----QVDVVISALAGGVL----------------SHHILEQLKLVEAIKEA--GNIKRFLPSEFGMDPDIMEHALQPGS  131 (312)
T ss_dssp             -----TCSEEEECCCCSSS----------------STTTTTHHHHHHHHHHS--CCCSEEECSCCSSCTTSCCCCCSSTT
T ss_pred             -----Ccchhhhhhhhccc----------------ccchhhhhHHHHHHHHh--cCCcEEEEeeccccCCCcccccchhh
Confidence                 68889998876322                12334444555554432  2346777776533222111       


Q ss_pred             ----HHHHHHH-HhhCCeEEEEEecccccCCCCCCC--------CCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ----ARGLALQ-LVERGIRVNGVAPGPIWTPLIPSS--------FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ----~~~la~e-~~~~gi~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                          .+....+ ....++....+.|+.+..+.....        ...+....+........+.+.+|+|++++.++..+
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~  210 (312)
T d1qyda_         132 ITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP  210 (312)
T ss_dssp             HHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred             hhhHHHHHHHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc
Confidence                2222222 334688888888887743221110        00111111112222233568899999999888654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.28  E-value=2.9e-11  Score=100.49  Aligned_cols=186  Identities=10%  Similarity=0.052  Sum_probs=112.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +.|+||||||+|.||++++++|+++|++|++++|+........+. ..+...   ....+.++.+|+.+.....+.++  
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~-~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~--   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA-QLLESF---KASGANIVHGSIDDHASLVEAVK--   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHH-HHHHHH---HTTTCEEECCCTTCHHHHHHHHH--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHH-HHHHhh---ccCCcEEEEeecccchhhhhhhh--
Confidence            468999999999999999999999999999999976654333222 112111   24567889999999887777664  


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-------
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-------  193 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  193 (272)
                           ..+.+|++++....                    .+...+.+++...  ....+++.||.........       
T Consensus        76 -----~~~~vi~~~~~~~~--------------------~~~~~~~~a~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~  128 (307)
T d1qyca_          76 -----NVDVVISTVGSLQI--------------------ESQVNIIKAIKEV--GTVKRFFPSEFGNDVDNVHAVEPAKS  128 (307)
T ss_dssp             -----TCSEEEECCCGGGS--------------------GGGHHHHHHHHHH--CCCSEEECSCCSSCTTSCCCCTTHHH
T ss_pred             -----hceeeeeccccccc--------------------chhhHHHHHHHHh--ccccceeeeccccccccccccccccc
Confidence                 58899998876422                    1222333433332  1236666666533222211       


Q ss_pred             ---H-HHHHHHHhhCCeEEEEEecccccCCCCCCC-------CCHHHHHhhccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 ---A-RGLALQLVERGIRVNGVAPGPIWTPLIPSS-------FSEEESAQFGSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 ---~-~~la~e~~~~gi~vn~i~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                         . ..........++....+.|+.+..+.....       .................+.+.+|+|.+++.++..+
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  205 (307)
T d1qyca_         129 VFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP  205 (307)
T ss_dssp             HHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred             cccccccccchhhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence               1 122222334578888889987754322110       01111111222233344668999999999998654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.14  E-value=2.5e-10  Score=97.54  Aligned_cols=194  Identities=12%  Similarity=0.056  Sum_probs=111.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH-HHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC-KRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~  119 (272)
                      +.|+|+||||+|.||.+++++|+++|++|+++.|+..+... .    .+.     ...++..+.+|++|..++ +.+   
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~-~----~~~-----~~~~v~~~~gD~~d~~~~~~~a---   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-E----ELQ-----AIPNVTLFQGPLLNNVPLMDTL---   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH-H----HHH-----TSTTEEEEESCCTTCHHHHHHH---
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh-h----hhc-----ccCCCEEEEeeCCCcHHHHHHH---
Confidence            57999999999999999999999999999999998655321 1    111     345688999999986543 222   


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh------
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE------  193 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~------  193 (272)
                          +...|.++.+......                 .|+....+++.++...  ...++++.||.........      
T Consensus        69 ----~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~aa~~a--gv~~~v~~Ss~~~~~~~~~~~~~~~  125 (350)
T d1xgka_          69 ----FEGAHLAFINTTSQAG-----------------DEIAIGKDLADAAKRA--GTIQHYIYSSMPDHSLYGPWPAVPM  125 (350)
T ss_dssp             ----HTTCSEEEECCCSTTS-----------------CHHHHHHHHHHHHHHH--SCCSEEEEEECCCGGGTSSCCCCTT
T ss_pred             ----hcCCceEEeecccccc-----------------hhhhhhhHHHHHHHHh--CCCceEEEeeccccccCCcccchhh
Confidence                3568887776543211                 1233334455555432  1246777777543322211      


Q ss_pred             --HHHHHHHHh-hCCeEEEEEecccccCCCCCCCCCH---HH-HH-hh------ccCCCCCCCCCccchhhhhhhhhccC
Q 039897          194 --ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSSFSE---EE-SA-QF------GSEVPMKRAGQPIEVAPCYVFLACNH  259 (272)
Q Consensus       194 --~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~~~~---~~-~~-~~------~~~~~~~~~~~~~dva~~~~~L~s~~  259 (272)
                        .+....++. ..++....+.||.+...+.......   .. .. ..      ....+.......+|++.++..++.+.
T Consensus       126 ~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~  205 (350)
T d1xgka_         126 WAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  205 (350)
T ss_dssp             THHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence              333343333 4578888889987655432111110   00 00 00      00111111112468999888887653


Q ss_pred             CCCcccceeecc
Q 039897          260 CSSYITGQVLHP  271 (272)
Q Consensus       260 ~~~~~tG~~i~i  271 (272)
                       .....|+.+++
T Consensus       206 -~~~~~G~~~~~  216 (350)
T d1xgka_         206 -PQKWNGHRIAL  216 (350)
T ss_dssp             -HHHHTTCEEEE
T ss_pred             -hhhcCCeEEEE
Confidence             33345665543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.12  E-value=2e-10  Score=94.69  Aligned_cols=174  Identities=13%  Similarity=0.091  Sum_probs=114.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      .+||||||+|.||.+++++|.++|++|+.++|+                            .+|++|.++++++++..  
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~----------------------------~~D~~d~~~~~~~l~~~--   51 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------------DLDITNVLAVNKFFNEK--   51 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------------TCCTTCHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech----------------------------hccCCCHHHHHHHHHHc--
Confidence            469999999999999999999999999998774                            24899999988888754  


Q ss_pred             hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh---------
Q 039897          123 AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE---------  193 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  193 (272)
                         .+|+|||+|+....     +.........+..|+.....+.......   ...+++.||...+.....         
T Consensus        52 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~---~~~~~~~ss~~v~~~~~~~~~~e~~~~  120 (281)
T d1vl0a_          52 ---KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGEAKEPITEFDEV  120 (281)
T ss_dssp             ---CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSCCSSCBCTTSCC
T ss_pred             ---CCCEEEeecccccc-----ccccccchhhcccccccccccccccccc---cccccccccceeeeccccccccccccc
Confidence               68999999987432     1223344566778888887777766543   335666665432222111         


Q ss_pred             --------HHHHHHHH-hhCCeEEEEEecccccCCCCCCCCCHHHHHhhcc-------CCCCCCCCCccchhhhhhhhhc
Q 039897          194 --------ARGLALQL-VERGIRVNGVAPGPIWTPLIPSSFSEEESAQFGS-------EVPMKRAGQPIEVAPCYVFLAC  257 (272)
Q Consensus       194 --------~~~la~e~-~~~gi~vn~i~PG~v~t~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~L~s  257 (272)
                              .+..+..+ ...+.+...+.|+.+..+...  +..........       .-....+...+|+++++.+++.
T Consensus       121 ~~~~~~~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~  198 (281)
T d1vl0a_         121 NPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNN--FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVID  198 (281)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSC--HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHH
T ss_pred             cchhhhhhhhhHHHHHHHHhCCCccccceeEEeCCCcc--cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhh
Confidence                    23333332 234778888999999766421  11111111111       1122345688999999999986


Q ss_pred             cC
Q 039897          258 NH  259 (272)
Q Consensus       258 ~~  259 (272)
                      ..
T Consensus       199 ~~  200 (281)
T d1vl0a_         199 EK  200 (281)
T ss_dssp             HT
T ss_pred             hc
Confidence            54

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.98  E-value=3.6e-10  Score=93.71  Aligned_cols=107  Identities=18%  Similarity=0.163  Sum_probs=79.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +||||||+|-||++++++|.++|. ++.++++..                        .+..|+++.+.++++++..   
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~------------------------~~~~Dl~~~~~~~~~i~~~---   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK------------------------EFCGDFSNPKGVAETVRKL---   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS------------------------SSCCCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc------------------------cccCcCCCHHHHHHHHHHc---
Confidence            599999999999999999999885 445555421                        1457999999999888764   


Q ss_pred             cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          124 YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       124 ~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                        ++|+|||+||.....     ...+.-...+..|+.++.++..++..   .+.+++++||...+
T Consensus        54 --~~D~Vih~Aa~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~~ss~~~~  108 (298)
T d1n2sa_          54 --RPDVIVNAAAHTAVD-----KAESEPELAQLLNATSVEAIAKAANE---TGAWVVHYSTDYVF  108 (298)
T ss_dssp             --CCSEEEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHTT---TTCEEEEEEEGGGS
T ss_pred             --CCCEEEEeccccccc-----ccccCccccccccccccccchhhhhc---cccccccccccccc
Confidence              699999999974321     11223356778999999999988753   24578888776443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.56  E-value=2.2e-07  Score=76.58  Aligned_cols=187  Identities=13%  Similarity=0.122  Sum_probs=103.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH-
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN-  122 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-  122 (272)
                      ||||||+|-||++++++|+++|+ .|+++++-.... .....                 ...++.+..+...+.+.+.. 
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~   63 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVNL-----------------VDLNIADYMDKEDFLIQIMAG   63 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHHH-----------------HTSCCSEEEEHHHHHHHHHTT
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhcc-----------------cccchhhhccchHHHHHHhhh
Confidence            89999999999999999999997 577775332221 11111                 11222222222334444433 


Q ss_pred             -hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh--------
Q 039897          123 -AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE--------  193 (272)
Q Consensus       123 -~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~--------  193 (272)
                       .+...++++|.|+.....    ...   .......|+.+...+..++...-   -++++.||.....+...        
T Consensus        64 ~~~~~~~~i~~~aa~~~~~----~~~---~~~~~~~~~~~~~~~l~~~~~~~---i~~v~~ss~~~~~~~~~~~~~~~~~  133 (307)
T d1eq2a_          64 EEFGDVEAIFHEGACSSTT----EWD---GKYMMDNNYQYSKELLHYCLERE---IPFLYASSAATYGGRTSDFIESREY  133 (307)
T ss_dssp             CCCSSCCEEEECCSCCCTT----CCC---HHHHHHHTHHHHHHHHHHHHHHT---CCEEEEEEGGGGTTCCSCBCSSGGG
T ss_pred             hcccchhhhhhhccccccc----ccc---ccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence             235688999998763321    122   24456778888888888776542   24555555443332211        


Q ss_pred             -------------HHHHHHHHh-hCCeEEEEEecccccCCCCCCC-----CCHHHHHhh----------ccCCCCCCCCC
Q 039897          194 -------------ARGLALQLV-ERGIRVNGVAPGPIWTPLIPSS-----FSEEESAQF----------GSEVPMKRAGQ  244 (272)
Q Consensus       194 -------------~~~la~e~~-~~gi~vn~i~PG~v~t~~~~~~-----~~~~~~~~~----------~~~~~~~~~~~  244 (272)
                                   ...++.++. ..++.+..+.|..+..+.....     .........          ........+..
T Consensus       134 ~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~  213 (307)
T d1eq2a_         134 EKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY  213 (307)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred             cccccccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeee
Confidence                         233444443 3588888899888866543111     001111111          11222234567


Q ss_pred             ccchhhhhhhhhccC
Q 039897          245 PIEVAPCYVFLACNH  259 (272)
Q Consensus       245 ~~dva~~~~~L~s~~  259 (272)
                      .+|++.++..++...
T Consensus       214 v~d~~~~~~~~~~~~  228 (307)
T d1eq2a_         214 VGDVADVNLWFLENG  228 (307)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             cccHHHHHHHHhhhc
Confidence            788999888877654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.47  E-value=8.9e-11  Score=91.72  Aligned_cols=44  Identities=18%  Similarity=0.283  Sum_probs=35.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILR   90 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~   90 (272)
                      +|.|+||+|+||+++|+.|++.|++|++.+|++++   ++...+++.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~---~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK---AEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH---HHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHHH
Confidence            57888999999999999999999999999998544   444444444

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.23  E-value=9.5e-06  Score=61.19  Aligned_cols=108  Identities=16%  Similarity=0.159  Sum_probs=71.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.+|+|+| +|+||...++.+...|++|+++++++.+.+.+++           .+.... +..|- ..++..+..+.
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-----------~ga~~~-~~~~~-~~~~~~~~~~~   90 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-----------CGADVT-LVVDP-AKEEESSIIER   90 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----------TTCSEE-EECCT-TTSCHHHHHHH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-----------cCCcEE-Eeccc-cccccchhhhh
Confidence            3577999997 6899999999999999999999987444322221           232222 22222 22344555666


Q ss_pred             HHHhcC-CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYG-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g-~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +.+..| ++|++|.++|...                          .....+..++++|+++.++-...
T Consensus        91 ~~~~~g~g~D~vid~~g~~~--------------------------~~~~a~~~~~~~G~iv~~G~~~~  133 (170)
T d1e3ja2          91 IRSAIGDLPNVTIDCSGNEK--------------------------CITIGINITRTGGTLMLVGMGSQ  133 (170)
T ss_dssp             HHHHSSSCCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCCSS
T ss_pred             hhcccccCCceeeecCCChH--------------------------HHHHHHHHHhcCCceEEEecCCC
Confidence            666554 6999999998621                          13334566788999999986543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.22  E-value=8.8e-06  Score=62.30  Aligned_cols=87  Identities=21%  Similarity=0.266  Sum_probs=67.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++++|+|||.|+ ||.|++++..|.+.|. +++++.|+.+..+++.+.++.+..     .........|+.+.+++...
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~   87 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-----NTDCVVTVTDLADQQAFAEA   87 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-----HSSCEEEEEETTCHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-----hcCcceEeeecccccchhhh
Confidence            4689999999998 6889999999999998 688999987777777766666543     23344567788877766555


Q ss_pred             HHHHHHhcCCccEEEEccccc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      ..       ..|++||+....
T Consensus        88 ~~-------~~diiIN~Tp~G  101 (182)
T d1vi2a1          88 LA-------SADILTNGTKVG  101 (182)
T ss_dssp             HH-------TCSEEEECSSTT
T ss_pred             hc-------ccceeccccCCc
Confidence            43       689999998764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.07  E-value=2.6e-05  Score=59.92  Aligned_cols=111  Identities=14%  Similarity=0.189  Sum_probs=70.0

Q ss_pred             CcEEEE-EcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALV-TGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlV-tGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |++++| +||+|++|.+.++.....|++|+.+.++....+...+.+.++       +.. ..+..|-.+..+....+.++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l-------Gad-~vi~~~~~~~~~~~~~v~~~  100 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-------GAT-QVITEDQNNSREFGPTIKEW  100 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-------TCS-EEEEHHHHHCGGGHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc-------ccc-EEEeccccchhHHHHHHHHH
Confidence            555555 699999999999988888999999988766555554444433       221 22322222223334444444


Q ss_pred             HH-hcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          121 VN-AYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       121 ~~-~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .. ..+++|+++.+.|...                           +...+..|+.+|++|.++...+
T Consensus       101 ~~~~g~~vdvv~D~vg~~~---------------------------~~~~~~~l~~~G~~v~~G~~~~  141 (189)
T d1gu7a2         101 IKQSGGEAKLALNCVGGKS---------------------------STGIARKLNNNGLMLTYGGMSF  141 (189)
T ss_dssp             HHHHTCCEEEEEESSCHHH---------------------------HHHHHHTSCTTCEEEECCCCSS
T ss_pred             HhhccCCceEEEECCCcch---------------------------hhhhhhhhcCCcEEEEECCccC
Confidence            43 3457999998876410                           1223466788999999987654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.06  E-value=7.2e-06  Score=62.44  Aligned_cols=123  Identities=16%  Similarity=0.125  Sum_probs=78.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.+|||+||+||+|...++.....|++|+.+.+++++.+.+++           .+.. ..+  |-++.  ..+....
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-----------lGa~-~vi--~~~~~--~~~~~~~   93 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-----------LGAK-EVL--AREDV--MAERIRP   93 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-----------TTCS-EEE--ECC-----------
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-----------cccc-eee--ecchh--HHHHHHH
Confidence            458899999999999999999888999999999987655433322           2322 222  22211  1111111


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHHH
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLAL  199 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la~  199 (272)
                      +  .-+++|+++.+.|...                           +...+..|+.+|+++.++...+.........+  
T Consensus        94 ~--~~~gvD~vid~vgg~~---------------------------~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~--  142 (176)
T d1xa0a2          94 L--DKQRWAAAVDPVGGRT---------------------------LATVLSRMRYGGAVAVSGLTGGAEVPTTVHPF--  142 (176)
T ss_dssp             C--CSCCEEEEEECSTTTT---------------------------HHHHHHTEEEEEEEEECSCCSSSCCCCCSHHH--
T ss_pred             h--hccCcCEEEEcCCchh---------------------------HHHHHHHhCCCceEEEeecccCcccCCCHHHH--
Confidence            1  2247999999988621                           12345777889999999998766554433332  


Q ss_pred             HHhhCCeEEEEE
Q 039897          200 QLVERGIRVNGV  211 (272)
Q Consensus       200 e~~~~gi~vn~i  211 (272)
                        -.+++++..+
T Consensus       143 --~~k~~~i~Gv  152 (176)
T d1xa0a2         143 --ILRGVSLLGI  152 (176)
T ss_dssp             --HHTTCEEEEC
T ss_pred             --HHCCcEEEEE
Confidence              1346777765

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.05  E-value=7.5e-06  Score=62.63  Aligned_cols=105  Identities=14%  Similarity=0.162  Sum_probs=69.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|.+|||+||+|++|.+.++.....|++|+.+.++.++.+.       ++.    .+....   +|-.+++..+...+..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~-------~~~----~Ga~~v---i~~~~~~~~~~~~~~~   94 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY-------LKQ----IGFDAA---FNYKTVNSLEEALKKA   94 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-------HHH----TTCSEE---EETTSCSCHHHHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH-------HHh----hhhhhh---cccccccHHHHHHHHh
Confidence            58999999999999999999999999999999887433222       221    232222   2333333333333221


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                        ..+++|+++.+.|..                           ..+..+..++.+|+++.++.....
T Consensus        95 --~~~Gvd~v~D~vG~~---------------------------~~~~~~~~l~~~G~~v~~G~~~~~  133 (182)
T d1v3va2          95 --SPDGYDCYFDNVGGE---------------------------FLNTVLSQMKDFGKIAICGAISVY  133 (182)
T ss_dssp             --CTTCEEEEEESSCHH---------------------------HHHHHGGGEEEEEEEEECCCGGGT
T ss_pred             --hcCCCceeEEecCch---------------------------hhhhhhhhccCCCeEEeecceeec
Confidence              224799999998741                           123355777889999998876543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.94  E-value=5.3e-05  Score=57.62  Aligned_cols=104  Identities=12%  Similarity=0.078  Sum_probs=66.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|.+|||+|+ |+||...+..+...|+ +|+++++++.+.+.++    +       .+.. .++  |.++ ++..+..+
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~----~-------lGa~-~vi--~~~~-~~~~~~~~   90 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----E-------IGAD-LTL--NRRE-TSVEERRK   90 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----H-------TTCS-EEE--ETTT-SCHHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheecccccccccccccccccccccccc----c-------ccce-EEE--eccc-cchHHHHH
Confidence            35899999997 8999999999999998 7999988744432221    1       2221 233  3332 22333444


Q ss_pred             HHHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      .+.+..  .++|++|.+.|...                          ..+..+..++++|+++.++-.
T Consensus        91 ~i~~~~~~~g~Dvvid~vG~~~--------------------------~~~~a~~~l~~~G~iv~~G~~  133 (182)
T d1vj0a2          91 AIMDITHGRGADFILEATGDSR--------------------------ALLEGSELLRRGGFYSVAGVA  133 (182)
T ss_dssp             HHHHHTTTSCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCC
T ss_pred             HHHHhhCCCCceEEeecCCchh--------------------------HHHHHHHHhcCCCEEEEEeec
Confidence            444433  25999999987621                          123345667888999988743

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=2.4e-05  Score=61.72  Aligned_cols=80  Identities=20%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             CCCCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCce
Q 039897           38 NKLRGKVALVTGG----------------DSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPM  101 (272)
Q Consensus        38 ~~l~~k~vlVtGa----------------s~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (272)
                      .+|+|++||||+|                ||..|.+||+++..+|++|.++.-.....                ....+.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----------------~p~~~~   65 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------------TPPFVK   65 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------------CCTTEE
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----------------cccccc
Confidence            5799999999986                58999999999999999999986643211                233344


Q ss_pred             EEeccCCChHHHHHHHHHHHHhcCCccEEEEcccccC
Q 039897          102 AISADLGFDENCKRVVDEVVNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       102 ~~~~D~~~~~~~~~~~~~~~~~~g~ld~vI~~ag~~~  138 (272)
                      .+.  +.+   ..++.+.+.+.....|++|++|++..
T Consensus        66 ~~~--~~t---~~~m~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          66 RVD--VMT---ALEMEAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             EEE--CCS---HHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cce--ehh---hHHHHHHHHhhhccceeEeeeechhh
Confidence            333  333   34455555555567899999999853

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.92  E-value=5.6e-05  Score=56.32  Aligned_cols=86  Identities=21%  Similarity=0.258  Sum_probs=56.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .+++++++||.|+ |++|..+++.|...|+ ++.++.|+..+.   .+....+       +  ....     +.+++.+.
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka---~~l~~~~-------~--~~~~-----~~~~~~~~   81 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA---VELARDL-------G--GEAV-----RFDELVDH   81 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH---HHHHHHH-------T--CEEC-----CGGGHHHH
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHH---HHHHHhh-------h--cccc-----cchhHHHH
Confidence            4689999999998 9999999999999998 588888874333   3333222       1  1222     22344444


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLER  153 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~  153 (272)
                      +.       ..|+||++.+...   ++  ++.+.++.
T Consensus        82 l~-------~~Divi~atss~~---~i--i~~~~i~~  106 (159)
T d1gpja2          82 LA-------RSDVVVSATAAPH---PV--IHVDDVRE  106 (159)
T ss_dssp             HH-------TCSEEEECCSSSS---CC--BCHHHHHH
T ss_pred             hc-------cCCEEEEecCCCC---cc--ccHhhhHH
Confidence            33       6999999988632   22  45555543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.9e-05  Score=59.81  Aligned_cols=101  Identities=19%  Similarity=0.187  Sum_probs=65.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|++|||+||+|++|...++.+...|++|+++.+++++.+.+       ++    .+.. .  .+|.++++    +.+++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-------~~----~Ga~-~--vi~~~~~~----~~~~i   89 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-------LQ----NGAH-E--VFNHREVN----YIDKI   89 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-------HH----TTCS-E--EEETTSTT----HHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-------cc----cCcc-c--cccccccc----HHHHh
Confidence            588999999999999999999889999999998763322211       11    2221 2  23555543    33333


Q ss_pred             HHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          121 VNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       121 ~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      ++..  .++|+++.+.|..                           ..+..+..++++|+++.++...
T Consensus        90 ~~~t~~~g~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~  130 (174)
T d1yb5a2          90 KKYVGEKGIDIIIEMLANV---------------------------NLSKDLSLLSHGGRVIVVGSRG  130 (174)
T ss_dssp             HHHHCTTCEEEEEESCHHH---------------------------HHHHHHHHEEEEEEEEECCCCS
T ss_pred             hhhhccCCceEEeecccHH---------------------------HHHHHHhccCCCCEEEEEecCC
Confidence            3332  3589999887631                           0122346678899999997643

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=0.00025  Score=53.16  Aligned_cols=106  Identities=15%  Similarity=0.190  Sum_probs=68.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++.+.+..+    +       .+.. .++..+-.+..+   ..+.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~----~-------~Ga~-~~~~~~~~~~~~---~~~~   89 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK----E-------IGAD-LVLQISKESPQE---IARK   89 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----H-------TTCS-EEEECSSCCHHH---HHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH----H-------hCCc-cccccccccccc---cccc
Confidence            4678999986 9999999999999999 7999988744332221    1       2222 233333334333   3444


Q ss_pred             HHHhcC-CccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCc
Q 039897          120 VVNAYG-KIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPL  188 (272)
Q Consensus       120 ~~~~~g-~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~  188 (272)
                      +...++ ++|++|.+.|...                          ..+..+..++++|++++++-....
T Consensus        90 ~~~~~g~g~Dvvid~~G~~~--------------------------~~~~a~~~~~~gG~iv~~G~~~~~  133 (171)
T d1pl8a2          90 VEGQLGCKPEVTIECTGAEA--------------------------SIQAGIYATRSGGTLVLVGLGSEM  133 (171)
T ss_dssp             HHHHHTSCCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCCCSC
T ss_pred             ccccCCCCceEEEeccCCch--------------------------hHHHHHHHhcCCCEEEEEecCCCC
Confidence            434443 7999999998621                          133455677889999999865543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.90  E-value=2.7e-05  Score=58.68  Aligned_cols=76  Identities=18%  Similarity=0.190  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|.|||.|+ |.+|+.+|++|+++|++|++.+|+....+.+   .+        ..........+..........+.  
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l---~~--------~~~~~~~~~~~~~~~~~~~~~i~--   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKL---SA--------GVQHSTPISLDVNDDAALDAEVA--   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHH---HT--------TCTTEEEEECCTTCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHH---Hh--------cccccccccccccchhhhHhhhh--
Confidence            3689999987 9999999999999999999999984433322   21        23334444556655555555543  


Q ss_pred             HHhcCCccEEEEccc
Q 039897          121 VNAYGKIDILVNNAA  135 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag  135 (272)
                           ..|.++....
T Consensus        67 -----~~~~~i~~~~   76 (182)
T d1e5qa1          67 -----KHDLVISLIP   76 (182)
T ss_dssp             -----TSSEEEECSC
T ss_pred             -----ccceeEeecc
Confidence                 5677765543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.76  E-value=2.6e-05  Score=59.40  Aligned_cols=101  Identities=17%  Similarity=0.240  Sum_probs=65.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|++|||+||+|++|...++.+...|++|+++.++.++.+.       +++    .+.. ..  .|..+++    +.+++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~-------l~~----~Ga~-~v--i~~~~~~----~~~~v   86 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-------LSR----LGVE-YV--GDSRSVD----FADEI   86 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-------HHT----TCCS-EE--EETTCST----HHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc-------ccc----cccc-cc--ccCCccC----HHHHH
Confidence            47899999999999999999998999999999886433221       221    2222 22  3444433    33344


Q ss_pred             HHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          121 VNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       121 ~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      ++..  .++|+++.+.|..            .               .+.++..++.+|++|.++...
T Consensus        87 ~~~t~~~g~d~v~d~~g~~------------~---------------~~~~~~~l~~~G~~v~~G~~~  127 (183)
T d1pqwa_          87 LELTDGYGVDVVLNSLAGE------------A---------------IQRGVQILAPGGRFIELGKKD  127 (183)
T ss_dssp             HHHTTTCCEEEEEECCCTH------------H---------------HHHHHHTEEEEEEEEECSCGG
T ss_pred             HHHhCCCCEEEEEecccch------------H---------------HHHHHHHhcCCCEEEEEccCC
Confidence            4433  3699999988731            1               112345578889999987554

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=3.3e-05  Score=50.07  Aligned_cols=43  Identities=16%  Similarity=0.166  Sum_probs=36.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA   82 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~   82 (272)
                      -++.++||+||+||+|....+.+...|++|+.+.+++++.+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3578999999999999999998888999999998876555444

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.65  E-value=0.00017  Score=55.10  Aligned_cols=126  Identities=15%  Similarity=0.144  Sum_probs=69.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +++|||+||+||+|...++.....|+++++. ..++++   ......+       .+. -  ...|.+++ ++.+.++++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~---~~~l~~~-------~ga-d--~vi~~~~~-~~~~~~~~~   96 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEK---CLFLTSE-------LGF-D--AAVNYKTG-NVAEQLREA   96 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHH---HHHHHHH-------SCC-S--EEEETTSS-CHHHHHHHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHH---Hhhhhhc-------ccc-e--EEeeccch-hHHHHHHHH
Confidence            4799999999999999999887789976554 444222   2222211       122 1  22344433 333444444


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCCh-----hHH
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSP-----EAR  195 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~-----~~~  195 (272)
                      .  ..++|+++.+.|..                           .++..+..++.+|+++.+++.++.....     ...
T Consensus        97 ~--~~GvDvv~D~vGg~---------------------------~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~  147 (187)
T d1vj1a2          97 C--PGGVDVYFDNVGGD---------------------------ISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPP  147 (187)
T ss_dssp             C--TTCEEEEEESSCHH---------------------------HHHHHHTTEEEEEEEEEC------------CCCCCH
T ss_pred             h--ccCceEEEecCCch---------------------------hHHHHhhhccccccEEEeccccccccccccCCchHH
Confidence            3  24699999988741                           0123456778899999998766542221     134


Q ss_pred             HHHHHHhhCCeEEEE
Q 039897          196 GLALQLVERGIRVNG  210 (272)
Q Consensus       196 ~la~e~~~~gi~vn~  210 (272)
                      .....+..+++++..
T Consensus       148 ~~~~~~~~k~i~~~g  162 (187)
T d1vj1a2         148 AVEAIRKERNITRER  162 (187)
T ss_dssp             HHHHHHHHTTCEEEE
T ss_pred             HHHHHHHhcceEEEE
Confidence            444455556777654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=4.9e-05  Score=57.55  Aligned_cols=105  Identities=11%  Similarity=0.095  Sum_probs=69.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|++|||+||+|++|...++.....|++|++++++.++.+.++    +       .+..   ..+|.++++    +.+++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~-------lGa~---~vi~~~~~d----~~~~v   89 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----K-------AGAW---QVINYREED----LVERL   89 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----H-------HTCS---EEEETTTSC----HHHHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----h-------cCCe---EEEECCCCC----HHHHH
Confidence            4889999999999999999998899999999999854433322    1       1221   223555543    23333


Q ss_pred             HHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC
Q 039897          121 VNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH  190 (272)
Q Consensus       121 ~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~  190 (272)
                      ++..  .++|+++.+.|...                           .......++++|+++..+.......
T Consensus        90 ~~~t~g~g~d~v~d~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~~~~~~~  134 (179)
T d1qora2          90 KEITGGKKVRVVYDSVGRDT---------------------------WERSLDCLQRRGLMVSFGNSSGAVT  134 (179)
T ss_dssp             HHHTTTCCEEEEEECSCGGG---------------------------HHHHHHTEEEEEEEEECCCTTCCCC
T ss_pred             HHHhCCCCeEEEEeCccHHH---------------------------HHHHHHHHhcCCeeeecccccCCcc
Confidence            3332  36899999887521                           0223456788899998887655433

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.59  E-value=0.00012  Score=54.79  Aligned_cols=102  Identities=12%  Similarity=0.148  Sum_probs=64.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .+.+++|+|++|++|..++..+...|+ +|+++++++.+.+.++    ++       +.. .++  |.++++-.++.   
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~----~~-------Ga~-~~i--~~~~~~~~~~~---   89 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----RA-------GAD-YVI--NASMQDPLAEI---   89 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----HH-------TCS-EEE--ETTTSCHHHHH---
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH----Hc-------CCc-eee--ccCCcCHHHHH---
Confidence            578999999999999999999998996 7888877643322221    11       221 223  33443333333   


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                       ++..  +++|++|.++|....               +           +..+..++++|+|+.++-..
T Consensus        90 -~~~~~~~~~d~vid~~g~~~~---------------~-----------~~a~~~l~~~G~iv~~G~~~  131 (170)
T d1jvba2          90 -RRITESKGVDAVIDLNNSEKT---------------L-----------SVYPKALAKQGKYVMVGLFG  131 (170)
T ss_dssp             -HHHTTTSCEEEEEESCCCHHH---------------H-----------TTGGGGEEEEEEEEECCSSC
T ss_pred             -HHHhhcccchhhhcccccchH---------------H-----------HhhhhhcccCCEEEEecccc
Confidence             3322  359999999886211               0           11246667889999987543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.58  E-value=0.00019  Score=53.96  Aligned_cols=99  Identities=17%  Similarity=0.218  Sum_probs=62.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|++|||+||+|++|...++.+...|++|+.+.++++..+.+++           .+... .+  |..+      ..+.
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-----------lGa~~-~i--~~~~------~~~~   85 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-----------LGAEE-AA--TYAE------VPER   85 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-----------TTCSE-EE--EGGG------HHHH
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-----------cccce-ee--ehhh------hhhh
Confidence            468999999999999999999888889999999887544433221           22221 12  3322      1122


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      +. ..+++|+++.+.|-   .  +                       ...+..++.+|++++++...+
T Consensus        86 ~~-~~~g~D~v~d~~G~---~--~-----------------------~~~~~~l~~~G~~v~~G~~~g  124 (171)
T d1iz0a2          86 AK-AWGGLDLVLEVRGK---E--V-----------------------EESLGLLAHGGRLVYIGAAEG  124 (171)
T ss_dssp             HH-HTTSEEEEEECSCT---T--H-----------------------HHHHTTEEEEEEEEEC-----
T ss_pred             hh-ccccccccccccch---h--H-----------------------HHHHHHHhcCCcEEEEeCCCC
Confidence            22 23579999997652   1  0                       123567788999999876543

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00012  Score=54.97  Aligned_cols=44  Identities=18%  Similarity=0.126  Sum_probs=36.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA   82 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~   82 (272)
                      .+++||.|||.|+ ||-+++++..|.+.|.++.++.|+.++.+.+
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l   57 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEEL   57 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHH
Confidence            4578999999997 7789999999999999999999985444333

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.48  E-value=0.00052  Score=50.99  Aligned_cols=37  Identities=19%  Similarity=0.294  Sum_probs=31.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .|.+|+|.|+ |++|...+..+...|++|+++++++.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~   63 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAK   63 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhH
Confidence            4789999886 999999999888899999999987443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.44  E-value=0.00053  Score=51.49  Aligned_cols=102  Identities=10%  Similarity=0.125  Sum_probs=62.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|.+|+|.|+ |+||...+..+...|++++++ ++++.+.    +.+.++       +. ..++  |.++++ ..+.++
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~----~~a~~~-------Ga-~~~i--~~~~~~-~~~~i~   90 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL----ELAKQL-------GA-THVI--NSKTQD-PVAAIK   90 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH----HHHHHH-------TC-SEEE--ETTTSC-HHHHHH
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHH----HHHHHc-------CC-eEEE--eCCCcC-HHHHHH
Confidence            45789999987 899999999888889976554 5542222    222222       21 1233  444432 333333


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      ++.  .+++|++|.+.|...                          ..+..+..++++|++++++..
T Consensus        91 ~~t--~gg~D~vid~~G~~~--------------------------~~~~~~~~~~~~G~i~~~G~~  129 (174)
T d1f8fa2          91 EIT--DGGVNFALESTGSPE--------------------------ILKQGVDALGILGKIAVVGAP  129 (174)
T ss_dssp             HHT--TSCEEEEEECSCCHH--------------------------HHHHHHHTEEEEEEEEECCCC
T ss_pred             HHc--CCCCcEEEEcCCcHH--------------------------HHHHHHhcccCceEEEEEeec
Confidence            331  257999999998631                          122345667889999998754

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.41  E-value=0.00013  Score=55.15  Aligned_cols=100  Identities=14%  Similarity=0.114  Sum_probs=62.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|.+|+|.|+ |+||...++.+...|+ +|+++++++.+.+..    .++       +. ..  .+|..+++    +.+.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a----~~l-------Ga-~~--~i~~~~~~----~~~~   87 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA----KFY-------GA-TD--ILNYKNGH----IEDQ   87 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH----HHH-------TC-SE--EECGGGSC----HHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH----Hhh-------Cc-cc--cccccchh----HHHH
Confidence            5789999986 8999999998888898 688888874332222    221       21 12  23443322    2233


Q ss_pred             HHHhc--CCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAY--GKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~--g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +.+..  .++|++|.++|...                          ..+..+..++++|+++.++-.
T Consensus        88 v~~~t~g~G~D~vid~~g~~~--------------------------~~~~a~~~~~~~G~iv~~G~~  129 (174)
T d1jqba2          88 VMKLTNGKGVDRVIMAGGGSE--------------------------TLSQAVKMVKPGGIISNINYH  129 (174)
T ss_dssp             HHHHTTTSCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCC
T ss_pred             HHHHhhccCcceEEEccCCHH--------------------------HHHHHHHHHhcCCEEEEEeec
Confidence            33333  35999999998621                          122334566788999998753

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.38  E-value=0.004  Score=45.22  Aligned_cols=121  Identities=14%  Similarity=0.114  Sum_probs=71.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +-.+++|.|+|+ |.+|..+|..|+..|.  +++++++++..   ++....++.+........+.....|.   +     
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~---~~g~a~Dl~~~~~~~~~~~~~~~~d~---~-----   70 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK---AIGDAMDFNHGKVFAPKPVDIWHGDY---D-----   70 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH---HHHHHHHHHHHTTSSSSCCEEEECCG---G-----
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc---ccchhccHhhCccccCCCeEEEECCH---H-----
Confidence            345778999996 9999999999999886  69999987433   33333444443221233333333332   1     


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                            ....-|++|.++|.....+.   ..    .+.+..|+.-.-.+.+.+..+ ..++.+++++-.
T Consensus        71 ------~l~daDvvvitag~~~~~~~---~R----~dl~~~N~~i~~~i~~~i~~~-~p~a~~ivvtNP  125 (148)
T d1ldna1          71 ------DCRDADLVVICAGANQKPGE---TR----LDLVDKNIAIFRSIVESVMAS-GFQGLFLVATNP  125 (148)
T ss_dssp             ------GTTTCSEEEECCSCCCCTTT---CS----GGGHHHHHHHHHHHHHHHHHH-TCCSEEEECSSS
T ss_pred             ------HhccceeEEEecccccccCc---ch----hHHHHHHHHHHHHHHHHHHhh-CCCceEEEecCc
Confidence                  12368999999998543211   11    222445555455555555444 234666666553

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.38  E-value=0.00018  Score=51.56  Aligned_cols=71  Identities=11%  Similarity=0.191  Sum_probs=51.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +|+|.|+ |.+|+.+++.|.+.|+.|++++.++..   +.+..+         .....++..|.++++.++++-      
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~---~~~~~~---------~~~~~vi~Gd~~~~~~l~~~~------   62 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI---CKKASA---------EIDALVINGDCTKIKTLEDAG------   62 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHH---------HCSSEEEESCTTSHHHHHHTT------
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhh---hhhhhh---------hhhhhhccCcccchhhhhhcC------
Confidence            6899997 999999999999999999999997433   322211         124678899999987655441      


Q ss_pred             cCCccEEEEc
Q 039897          124 YGKIDILVNN  133 (272)
Q Consensus       124 ~g~ld~vI~~  133 (272)
                      ....|.++..
T Consensus        63 i~~a~~vv~~   72 (132)
T d1lssa_          63 IEDADMYIAV   72 (132)
T ss_dssp             TTTCSEEEEC
T ss_pred             hhhhhhhccc
Confidence            1356766654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.33  E-value=0.0039  Score=45.22  Aligned_cols=117  Identities=14%  Similarity=0.141  Sum_probs=67.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ++++|.|+|+ |.+|..+|..|+++|  .++++++++..   ..+....++........ .......|.   +       
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~---~~~g~a~Dl~~a~~~~~-~~~~~~~d~---~-------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKD---RTKGDALDLEDAQAFTA-PKKIYSGEY---S-------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH---HHHHHHHHHHGGGGGSC-CCEEEECCG---G-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccc---hhHHHHHHHhccccccC-CceEeeccH---H-------
Confidence            4568999995 999999999999998  47999998743   33334444544333222 233344342   1       


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                          ....-|++|.++|.....    .   .+-.+.+..|+.-...+.+.+..+ ..++-+++++-
T Consensus        69 ----~~~~adivvitag~~~~~----g---~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvtN  122 (146)
T d1ez4a1          69 ----DCKDADLVVITAGAPQKP----G---ESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAAN  122 (146)
T ss_dssp             ----GGTTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred             ----HhccccEEEEecccccCC----C---CCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeCC
Confidence                124689999999974321    1   112334566765555555555543 22455555553

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.32  E-value=0.00041  Score=52.05  Aligned_cols=78  Identities=14%  Similarity=0.131  Sum_probs=53.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++++|.|+|.|+ ||.+++++..|.+.+.+++++.|+.++   .++..+.+.     ...++..+..|..         
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~---a~~l~~~~~-----~~~~~~~~~~~~~---------   75 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSK---TKELAERFQ-----PYGNIQAVSMDSI---------   75 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHH---HHHHHHHHG-----GGSCEEEEEGGGC---------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHH---HHHHHHHHh-----hccccchhhhccc---------
Confidence            4688999999986 677999999999988899999998544   333333332     2234444444421         


Q ss_pred             HHHHHhcCCccEEEEcccccC
Q 039897          118 DEVVNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~  138 (272)
                           .....|++||+.....
T Consensus        76 -----~~~~~diiIN~tp~g~   91 (171)
T d1p77a1          76 -----PLQTYDLVINATSAGL   91 (171)
T ss_dssp             -----CCSCCSEEEECCCC--
T ss_pred             -----cccccceeeecccccc
Confidence                 1246899999988743

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.31  E-value=0.00034  Score=53.69  Aligned_cols=117  Identities=13%  Similarity=0.046  Sum_probs=67.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|.+|||.|+ |++|...+..+...|+ +|++++.++.+.+..+    +       .+.  .. ..|-.+. ++.+.+.+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~-------~Ga--~~-~~~~~~~-~~~~~i~~   88 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----A-------QGF--EI-ADLSLDT-PLHEQIAA   88 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----H-------TTC--EE-EETTSSS-CHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----h-------ccc--cE-EEeCCCc-CHHHHHHH
Confidence            5889999986 8999888888777788 6778877643332221    1       232  22 2233332 33333333


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +. ...++|++|.+.|......+...           .+..+.-..++..+..++.+|+|+.++-.
T Consensus        89 ~t-~g~g~D~vid~vG~~~~~~~~~~-----------~~~~~~~~~l~~~~~~~r~gG~v~~~G~~  142 (195)
T d1kola2          89 LL-GEPEVDCAVDAVGFEARGHGHEG-----------AKHEAPATVLNSLMQVTRVAGKIGIPGLY  142 (195)
T ss_dssp             HH-SSSCEEEEEECCCTTCBCSSTTG-----------GGSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             Hh-CCCCcEEEEECccccccCCcccc-----------eeecCcHHHHHHHHHHHhcCCEEEEeeec
Confidence            22 22469999999986322111111           11222233455566777889999999853

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.30  E-value=0.007  Score=43.74  Aligned_cols=110  Identities=13%  Similarity=0.034  Sum_probs=66.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+||+|.+|..++..|+.+|.  ++++++++. +..+++....++.+.......+......--.+.+          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~-~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~----------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH-SINKLEGLREDIYDALAGTRSDANIYVESDENLR----------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG-GHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh-hhHhhhcccccchhcccccccCCccccCCcchHH----------
Confidence            589999999999999999999984  899999873 2233443344444432222333332211111111          


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhc
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRH  172 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  172 (272)
                       ....-|++|.+||.....    ..+..   ..++.|..-.-.+.+.+.++
T Consensus        71 -~l~~aDvVVitAG~~~~~----g~sR~---dl~~~Na~iv~~i~~~i~~~  113 (145)
T d1hyea1          71 -IIDESDVVIITSGVPRKE----GMSRM---DLAKTNAKIVGKYAKKIAEI  113 (145)
T ss_dssp             -GGTTCSEEEECCSCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred             -HhccceEEEEecccccCC----CCChh---hhhhhhHHHHHHHHHHHhcc
Confidence             124689999999984322    22332   35667776666666666555

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.26  E-value=0.0028  Score=45.91  Aligned_cols=116  Identities=17%  Similarity=0.145  Sum_probs=69.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+||+|.+|.++|..|+.+|.  ++++++.+...     ....++.      ...............+..+.+    
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~-----~~a~Dl~------~~~~~~~~~~~~~~~~~~~~~----   66 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP-----GVAADLS------HIETRATVKGYLGPEQLPDCL----   66 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH-----HHHHHHT------TSSSSCEEEEEESGGGHHHHH----
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc-----hhhHHHh------hhhhhcCCCeEEcCCChHHHh----
Confidence            689999999999999999998886  58888886321     1111221      111111111111222222222    


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                         ..-|++|..||.....+    .+.   .+.++.|+.-.-.+.+.+..+ ..++.|+.++..
T Consensus        67 ---~~aDivVitag~~~~~g----~sR---~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvtNP  119 (144)
T d1mlda1          67 ---KGCDVVVIPAGVPRKPG----MTR---DDLFNTNATIVATLTAACAQH-CPDAMICIISNP  119 (144)
T ss_dssp             ---TTCSEEEECCSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred             ---CCCCEEEECCCcCCCCC----CCc---chHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCc
Confidence               37999999999743221    122   224677777777777777665 345777777764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.24  E-value=0.00028  Score=50.53  Aligned_cols=73  Identities=11%  Similarity=0.071  Sum_probs=50.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |.++|.|. |.+|+.+++.|.++|+.|++++.+++..+.+             .......+..|.++++.+.++-     
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~-------------~~~~~~~~~gd~~~~~~l~~a~-----   61 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY-------------ASYATHAVIANATEENELLSLG-----   61 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT-------------TTTCSEEEECCTTCTTHHHHHT-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH-------------HHhCCcceeeecccchhhhccC-----
Confidence            56788866 7999999999999999999999874332221             2233456778999987665541     


Q ss_pred             hcCCccEEEEccc
Q 039897          123 AYGKIDILVNNAA  135 (272)
Q Consensus       123 ~~g~ld~vI~~ag  135 (272)
                       ....|.+|...+
T Consensus        62 -i~~a~~vi~~~~   73 (134)
T d2hmva1          62 -IRNFEYVIVAIG   73 (134)
T ss_dssp             -GGGCSEEEECCC
T ss_pred             -CccccEEEEEcC
Confidence             124677666554

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.23  E-value=0.0016  Score=48.87  Aligned_cols=105  Identities=13%  Similarity=0.129  Sum_probs=63.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|.+|+|.| .|+||...+..+...|+ +|++++.++++.+..+    +       .+. ..++...-. ++......+
T Consensus        27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~----~-------~Ga-~~~i~~~~~-~~~~~~~~~   92 (174)
T d1e3ia2          27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK----A-------LGA-TDCLNPREL-DKPVQDVIT   92 (174)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----H-------TTC-SEEECGGGC-SSCHHHHHH
T ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHH----H-------hCC-CcccCCccc-hhhhhhhHh
Confidence            3578999997 59999999999999999 5777777644332221    1       222 222322111 122333333


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccC-CeEEEecCCC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEG-SAIINTTSVE  186 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-g~iv~vsS~~  186 (272)
                      ..  ..+++|++|-+.|...                          .....+..++++ |+++.++-..
T Consensus        93 ~~--~~~G~d~vie~~G~~~--------------------------~~~~a~~~~~~g~G~~v~vG~~~  133 (174)
T d1e3ia2          93 EL--TAGGVDYSLDCAGTAQ--------------------------TLKAAVDCTVLGWGSCTVVGAKV  133 (174)
T ss_dssp             HH--HTSCBSEEEESSCCHH--------------------------HHHHHHHTBCTTTCEEEECCCSS
T ss_pred             hh--hcCCCcEEEEecccch--------------------------HHHHHHHHhhcCCeEEEecCCCC
Confidence            22  2358999999998621                          122344566674 8999988543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.23  E-value=0.0012  Score=48.84  Aligned_cols=102  Identities=14%  Similarity=0.145  Sum_probs=61.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|.++||.|+ |+||...+..+...|++|+++++++.+.+.+       ++    .+..   ...|-++.+ ...   .+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-------k~----~Ga~---~~~~~~~~~-~~~---~~   87 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-------KE----LGAD---LVVNPLKED-AAK---FM   87 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-------HH----TTCS---EEECTTTSC-HHH---HH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh-------hh----cCcc---eecccccch-hhh---hc
Confidence            4789999875 9999999999999999999998874432222       11    2222   122333322 222   22


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEP  187 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~  187 (272)
                      .+...+.+.+|.+++...                          .+...++.++.+|+++.++-...
T Consensus        88 ~~~~~~~~~~v~~~~~~~--------------------------~~~~a~~~l~~~G~i~~~g~~~~  128 (168)
T d1rjwa2          88 KEKVGGVHAAVVTAVSKP--------------------------AFQSAYNSIRRGGACVLVGLPPE  128 (168)
T ss_dssp             HHHHSSEEEEEESSCCHH--------------------------HHHHHHHHEEEEEEEEECCCCSS
T ss_pred             ccccCCCceEEeecCCHH--------------------------HHHHHHHHhccCCceEecccccC
Confidence            333345666666665421                          13445567788899999875433

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.19  E-value=0.00024  Score=53.25  Aligned_cols=120  Identities=17%  Similarity=0.161  Sum_probs=74.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+.+|||+||+||+|...++.....|++|+.+.++.++.+.+++           .+... .+.-     +   ....+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-----------lGad~-vi~~-----~---~~~~~~   82 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-----------LGASE-VISR-----E---DVYDGT   82 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-----------HTCSE-EEEH-----H---HHCSSC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-----------hcccc-eEec-----c---chhchh
Confidence            46789999999999999999888889999999998665444332           12222 1211     1   111111


Q ss_pred             HHh--cCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHH
Q 039897          121 VNA--YGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLA  198 (272)
Q Consensus       121 ~~~--~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la  198 (272)
                      ...  -+++|+++.+.|..                           .+...+..++.+|+++.++...+.........+ 
T Consensus        83 ~~~~~~~gvd~vid~vgg~---------------------------~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l-  134 (167)
T d1tt7a2          83 LKALSKQQWQGAVDPVGGK---------------------------QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPF-  134 (167)
T ss_dssp             CCSSCCCCEEEEEESCCTH---------------------------HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHH-
T ss_pred             hhcccCCCceEEEecCcHH---------------------------HHHHHHHHhccCceEEEeeccCCCcccCCHHHH-
Confidence            111  14689999887752                           112355777889999999987754332222221 


Q ss_pred             HHHhhCCeEEEEE
Q 039897          199 LQLVERGIRVNGV  211 (272)
Q Consensus       199 ~e~~~~gi~vn~i  211 (272)
                         .-+++++..+
T Consensus       135 ---~~k~~~i~G~  144 (167)
T d1tt7a2         135 ---ILRGVSLLGI  144 (167)
T ss_dssp             ---HTSCCEEEEC
T ss_pred             ---HHCCcEEEEE
Confidence               2356777664

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.12  E-value=0.0037  Score=46.76  Aligned_cols=120  Identities=8%  Similarity=-0.010  Sum_probs=67.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      -+|.||||+|.||+.++..|++...       .+.+.+.... ...++...-++.+.   .......+.  .++  +.. 
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~-~~~l~g~~mdl~d~---a~~~~~~~~--~~~--~~~-   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS-FQALEGVAMELEDS---LYPLLREVS--IGI--DPY-   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHTT---TCTTEEEEE--EES--CHH-
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc-cchhcchhhhhccc---ccccccCcc--ccc--cch-
Confidence            4799999999999999999987532       3444444322 22333333333321   111111111  111  111 


Q ss_pred             HHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                            +.+...|++|..+|.....    ..+.+   +.+..|..-.-.+.+.+..+-.+...|+.++-
T Consensus        96 ------~~~~~aDvVvi~ag~~rkp----g~tR~---Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          96 ------EVFEDVDWALLIGAKPRGP----GMERA---ALLDINGQIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             ------HHTTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ------hhccCCceEEEeeccCCCC----CCcHH---HHHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence                  2234799999999985322    23443   35666776666667766665444455666654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.00028  Score=47.29  Aligned_cols=38  Identities=16%  Similarity=0.218  Sum_probs=33.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      +++||+|+|.|. |..|+++|+.|.++|++|.+.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            689999999998 55699999999999999999998654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.07  E-value=0.022  Score=41.68  Aligned_cols=123  Identities=15%  Similarity=0.129  Sum_probs=71.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      +..+.+++|.|+|+ |.+|..++..|+.+|.  ++++++++.   +..+....++................|.   ++  
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~---~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~--   85 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLE---DKLKGEMMDLQHGSLFLQTPKIVADKDY---SV--   85 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH---HHHHHHHHHHHHTGGGCCCSEEEECSSG---GG--
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecc---chhHHHHHHHhccccccCCCeEEeccch---hh--
Confidence            34466789999996 9999999999999987  799999873   3334444444443221222222222222   22  


Q ss_pred             HHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                               ...-|++|..||.....+    .+.   ...+..|+.-.-.+...+... ..++-+++++-.
T Consensus        86 ---------~~~adiVVitAg~~~~~g----~tR---~~l~~~N~~i~~~i~~~i~~~-~p~aiiivvtNP  139 (160)
T d1i0za1          86 ---------TANSKIVVVTAGVRQQEG----ESR---LNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVSNP  139 (160)
T ss_dssp             ---------GTTCSEEEECCSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred             ---------cccccEEEEecCCccccC----cch---HHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCc
Confidence                     236899999999853221    122   233455555444444444433 224667776654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00038  Score=52.56  Aligned_cols=39  Identities=18%  Similarity=0.226  Sum_probs=34.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE   79 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~   79 (272)
                      .+.++||+||+||+|...++.....|++|+.+.+++++.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~   69 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH
Confidence            445899999999999999998889999999999875554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.05  E-value=0.0024  Score=46.50  Aligned_cols=83  Identities=12%  Similarity=0.115  Sum_probs=54.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ..=|+|.|+||.|.+|..+++.|.+.|++|.+.+++........  .         ..........+   ...+...+.+
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~--~---------~~~~~v~~~~~---~~~~~~v~~~   72 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI--L---------ANADVVIVSVP---INLTLETIER   72 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH--H---------TTCSEEEECSC---GGGHHHHHHH
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh--h---------hhccccccccc---hhhheeeeec
Confidence            44569999999999999999999999999999999865432211  1         23334433333   4556666666


Q ss_pred             HHHhcCCccEEEEcccc
Q 039897          120 VVNAYGKIDILVNNAAV  136 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~  136 (272)
                      +......=.+++..+++
T Consensus        73 ~~~~~~~~~iiiD~~Sv   89 (152)
T d2pv7a2          73 LKPYLTENMLLADLTSV   89 (152)
T ss_dssp             HGGGCCTTSEEEECCSC
T ss_pred             ccccccCCceEEEeccc
Confidence            65544333355555443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.04  E-value=0.01  Score=42.89  Aligned_cols=121  Identities=9%  Similarity=0.029  Sum_probs=66.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      |+|.|+|+ |.+|..++..|+.+|.  ++++.+++..   .++....++.+..............|.   ++        
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~---~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~--------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEA---KVKADQIDFQDAMANLEAHGNIVINDW---AA--------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH---HHHHHHHHHHHHGGGSSSCCEEEESCG---GG--------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccc---hhhhHHHhhhccccccCCccceeccCH---HH--------
Confidence            67888995 9999999999999884  7999988743   333334444443322333333333332   21        


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                         ...-|++|.+||.......-   .-.+=.+.++.|..-...+.+.+..+ ..++-++.++-.
T Consensus        67 ---l~~adiVVitaG~~~~~~~~---~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aivivvtNP  124 (146)
T d1hyha1          67 ---LADADVVISTLGNIKLQQDN---PTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVVISNP  124 (146)
T ss_dssp             ---GTTCSEEEECCSCGGGTC----------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred             ---hccccEEEEecccccccccc---CCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecCc
Confidence               23689999999974321110   00111223455654444444444332 224566666553

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.03  E-value=0.0015  Score=48.56  Aligned_cols=101  Identities=19%  Similarity=0.149  Sum_probs=63.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.+++|.|+ |++|...++.+...|++|+++++++++.+..++           .+.. .++  |..++.+   +.+ 
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-----------lGa~-~~i--~~~~~~~---~~~-   86 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-----------MGAD-HYI--ATLEEGD---WGE-   86 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-----------HTCS-EEE--EGGGTSC---HHH-
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-----------cCCc-EEe--eccchHH---HHH-
Confidence            35889999986 899999998888889999999998655433222           1222 222  2222211   111 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        ...+.+|.++.+.+..... .+.                       ..+..++.+|+++.++-.
T Consensus        87 --~~~~~~d~vi~~~~~~~~~-~~~-----------------------~~~~~l~~~G~iv~~G~~  126 (168)
T d1piwa2          87 --KYFDTFDLIVVCASSLTDI-DFN-----------------------IMPKAMKVGGRIVSISIP  126 (168)
T ss_dssp             --HSCSCEEEEEECCSCSTTC-CTT-----------------------TGGGGEEEEEEEEECCCC
T ss_pred             --hhhcccceEEEEecCCccc-hHH-----------------------HHHHHhhccceEEEeccc
Confidence              2235799999988764321 111                       124667788999998743

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.00  E-value=0.00088  Score=50.28  Aligned_cols=36  Identities=31%  Similarity=0.266  Sum_probs=32.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      +|++.|.|+ |.+|.++|..|+++|++|.+.+|+++.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~   36 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQR   36 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            478999998 889999999999999999999997443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.97  E-value=0.0056  Score=44.73  Aligned_cols=127  Identities=14%  Similarity=0.023  Sum_probs=69.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .-+.++|.|+|+ |.+|..++..|+..+. ++++++.+....+..   ...+................  ++.   ++.+
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~---a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~   74 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGK---ALDLSHVTSVVDTNVSVRAE--YSY---EAAL   74 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH---HHHHHHHHHHTTCCCCEEEE--CSH---HHHH
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhH---HHHHhhhccccCCeeEEecc--Cch---hhhh
Confidence            345688999997 9999999999998885 799998875433332   23333221112222222211  111   1122


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCC-cccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGS-VEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                             ..-|++|.++|.....+. -...+.   ...+..|..-...+.+.+..+ ..++-++.+|..
T Consensus        75 -------~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i~~~-~p~aiviivsNP  132 (154)
T d1pzga1          75 -------TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY-CPKTFIIVVTNP  132 (154)
T ss_dssp             -------TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred             -------cCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeCCc
Confidence                   368999999998543221 111122   223455665555555555443 224566666654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0011  Score=49.27  Aligned_cols=99  Identities=15%  Similarity=0.108  Sum_probs=64.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.+|+|.|+ |+||...++.+...|++++++++++++.+.+    .++       +..   ..+|..+++...     
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a----~~l-------Gad---~~i~~~~~~~~~-----   88 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA----KAL-------GAD---EVVNSRNADEMA-----   88 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH----HHH-------TCS---EEEETTCHHHHH-----
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH----hcc-------CCc---EEEECchhhHHH-----
Confidence            45889999986 8999999998888999999998875543222    222       211   223554443222     


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                        ...+++|++|.+.|....        .                  +..+..++++|+++.++...
T Consensus        89 --~~~~~~D~vid~~g~~~~--------~------------------~~~~~~l~~~G~iv~~G~~~  127 (168)
T d1uufa2          89 --AHLKSFDFILNTVAAPHN--------L------------------DDFTTLLKRDGTMTLVGAPA  127 (168)
T ss_dssp             --TTTTCEEEEEECCSSCCC--------H------------------HHHHTTEEEEEEEEECCCC-
T ss_pred             --HhcCCCceeeeeeecchh--------H------------------HHHHHHHhcCCEEEEeccCC
Confidence              222579999999986321        1                  12345677889999987643

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.95  E-value=0.018  Score=41.83  Aligned_cols=119  Identities=14%  Similarity=0.067  Sum_probs=65.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +|.|+||+|.+|+.++..|++.+.       ...++.. ....+.+.....++...   .......+...-.+    .  
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----~--   75 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI-PQAMKALEGVVMELEDC---AFPLLAGLEATDDP----K--   75 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC-GGGHHHHHHHHHHHHTT---TCTTEEEEEEESCH----H--
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcc-ccchhhHcCchhhhhcc---ccccccccccCCch----h--
Confidence            899999999999999999998653       1222222 22333444333333321   11222222222111    1  


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                           +.+..-|++|..+|....    ...+..+   .+..|+.-.-.+.+.+..+-.+.+.|+.+|.
T Consensus        76 -----~~~~~advViitaG~~~~----pg~~r~d---l~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          76 -----VAFKDADYALLVGAAPRK----AGMERRD---LLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             -----HHTTTCSEEEECCCCCCC----TTCCHHH---HHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             -----hhcccccEEEeecCcCCC----CCCcHHH---HHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence                 122479999999998532    2334433   3566776666666666655333455655553

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.93  E-value=0.0011  Score=49.59  Aligned_cols=81  Identities=19%  Similarity=0.213  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|.+|||.|+ +|+|...+..+...|+ +|+++++++++.+...+           .+....+...|-  ++.+.+..+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-----------~Ga~~~i~~~~~--~~~~~~~~~~   93 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-----------VGATECVNPQDY--KKPIQEVLTE   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----------TTCSEEECGGGC--SSCHHHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-----------hCCeeEEecCCc--hhHHHHHHHH
Confidence            5789999999 6899999999999986 78888887554433221           222211111222  2233333333


Q ss_pred             HHHhcCCccEEEEccccc
Q 039897          120 VVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~  137 (272)
                      ..  .+++|++|-+.|..
T Consensus        94 ~~--~~G~D~vid~~G~~  109 (176)
T d2jhfa2          94 MS--NGGVDFSFEVIGRL  109 (176)
T ss_dssp             HT--TSCBSEEEECSCCH
T ss_pred             Hh--cCCCCEEEecCCch
Confidence            32  25799999999873

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.92  E-value=0.0024  Score=47.57  Aligned_cols=100  Identities=15%  Similarity=0.118  Sum_probs=60.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++.+.+       ++    .+. ..++  |..+ +..++..+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~-------~~----~ga-~~~i--~~~~-~~~~~~~~~   95 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-------ER----LGA-DHVV--DARR-DPVKQVMEL   95 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-------HH----TTC-SEEE--ETTS-CHHHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHH-------hh----ccc-ceee--cCcc-cHHHHHHHh
Confidence            4789999885 9999999998888887 556666663322211       11    222 2333  3222 333333322


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                      .  ...++|++|.++|...                          ..+..+..++++|+++.++-
T Consensus        96 ~--~~~g~d~vid~~g~~~--------------------------~~~~a~~~l~~~G~iv~~G~  132 (172)
T d1h2ba2          96 T--RGRGVNVAMDFVGSQA--------------------------TVDYTPYLLGRMGRLIIVGY  132 (172)
T ss_dssp             T--TTCCEEEEEESSCCHH--------------------------HHHHGGGGEEEEEEEEECCC
T ss_pred             h--CCCCceEEEEecCcch--------------------------HHHHHHHHHhCCCEEEEEeC
Confidence            1  1236999999998631                          11233467788999999874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.91  E-value=0.0026  Score=47.68  Aligned_cols=80  Identities=14%  Similarity=0.092  Sum_probs=50.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH-HHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN-CKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~  117 (272)
                      -.|.+|+|+|+ ||+|...+..+...|+ +|+++++++++.+..++           .+.. .++  |..+.+. .+...
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-----------~GA~-~~i--n~~~~~~~~~~~~   92 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-----------VGAT-ECI--SPKDSTKPISEVL   92 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----------HTCS-EEE--CGGGCSSCHHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-----------cCCc-EEE--CccccchHHHHHH
Confidence            45889999986 8999999999999995 79999998555433322           1222 222  2222221 22222


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      + .. ..+++|++|.+.|.
T Consensus        93 ~-~~-~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          93 S-EM-TGNNVGYTFEVIGH  109 (176)
T ss_dssp             H-HH-HTSCCCEEEECSCC
T ss_pred             H-Hh-ccccceEEEEeCCc
Confidence            2 11 12479999999987

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.80  E-value=0.0026  Score=43.95  Aligned_cols=39  Identities=21%  Similarity=0.307  Sum_probs=34.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .+++||++||.|++. +|..-++.|++.|++|++++....
T Consensus         8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            579999999999765 899999999999999999876543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.72  E-value=0.0078  Score=44.83  Aligned_cols=89  Identities=15%  Similarity=0.122  Sum_probs=60.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHH------------HHHHHHhhhcCCCCceEEeccCCCh
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQET------------LEILREAKTSDAKDPMAISADLGFD  110 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~  110 (272)
                      +.|-|+|- |-+|.++|+.|++.|++|++.+|+++..+.+.+.            .+++.+    .......+-..+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~----~~~~~~~ii~~~~~~   77 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVS----KLKKPRRIILLVKAG   77 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH----HBCSSCEEEECSCTT
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhh----hhcccceEEEecCch
Confidence            45667775 8899999999999999999999986655544332            112211    122334455566777


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcccc
Q 039897          111 ENCKRVVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       111 ~~~~~~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      +.+....+.+......=+++|.+...
T Consensus        78 ~~v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          78 QAVDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHHHhccccCcEEEecCcc
Confidence            88888888887765555677766654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.0036  Score=45.57  Aligned_cols=75  Identities=13%  Similarity=0.055  Sum_probs=53.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNA  123 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (272)
                      +++|.|. |.+|..+++.|.++|.+|++++.++..   .....+..      ...++.++..|.++++.++++-      
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~---~~~~~~~~------~~~~~~vi~Gd~~d~~~L~~a~------   68 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPED---DIKQLEQR------LGDNADVIPGDSNDSSVLKKAG------   68 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH---HHHHHHHH------HCTTCEEEESCTTSHHHHHHHT------
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchh---HHHHHHHh------hcCCcEEEEccCcchHHHHHhc------
Confidence            5778887 689999999999999999999887433   22222222      2456888999999987554432      


Q ss_pred             cCCccEEEEcc
Q 039897          124 YGKIDILVNNA  134 (272)
Q Consensus       124 ~g~ld~vI~~a  134 (272)
                      ....+.+|...
T Consensus        69 i~~a~~vi~~~   79 (153)
T d1id1a_          69 IDRCRAILALS   79 (153)
T ss_dssp             TTTCSEEEECS
T ss_pred             cccCCEEEEcc
Confidence            23567776664

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.66  E-value=0.0034  Score=46.88  Aligned_cols=80  Identities=19%  Similarity=0.115  Sum_probs=50.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH-HHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE-NCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~  117 (272)
                      -.|.+|+|.|+ ||+|...+..+...|+ +|+++++++++.+..++           .+. ..++  |.++.+ .+.+..
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-----------lGa-~~~i--~~~~~d~~~~~~~   90 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-----------LGA-TECL--NPKDYDKPIYEVI   90 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-----------TTC-SEEE--CGGGCSSCHHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-----------cCC-cEEE--cCCCchhHHHHHH
Confidence            45889999986 8999999999999997 68888887554433321           222 2223  222222 122222


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      ...  ..+++|++|-+.|.
T Consensus        91 ~~~--~~~G~d~vid~~g~  107 (174)
T d1p0fa2          91 CEK--TNGGVDYAVECAGR  107 (174)
T ss_dssp             HHH--TTSCBSEEEECSCC
T ss_pred             HHh--cCCCCcEEEEcCCC
Confidence            221  22579999999876

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.58  E-value=0.005  Score=45.68  Aligned_cols=80  Identities=21%  Similarity=0.248  Sum_probs=47.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|.+|||.|+ ||+|...+..+...|++ |+++++++++.+..    .++       +. ..++..+- +.+.+.+.++.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a----k~l-------Ga-~~~i~~~~-~~~~~~~~~~~   93 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA----KEF-------GA-TECINPQD-FSKPIQEVLIE   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----HHH-------TC-SEEECGGG-CSSCHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH----HHh-------CC-cEEEeCCc-hhhHHHHHHHH
Confidence            5789999998 58999999999999975 55555553332222    222       21 12232211 12233333333


Q ss_pred             HHHhcCCccEEEEcccc
Q 039897          120 VVNAYGKIDILVNNAAV  136 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~  136 (272)
                      .  ..+++|++|.+.|.
T Consensus        94 ~--~~~g~D~vid~~G~  108 (176)
T d2fzwa2          94 M--TDGGVDYSFECIGN  108 (176)
T ss_dssp             H--TTSCBSEEEECSCC
T ss_pred             H--cCCCCcEeeecCCC
Confidence            2  22579999999886

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.47  E-value=0.08  Score=37.70  Aligned_cols=118  Identities=15%  Similarity=0.109  Sum_probs=69.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|.|+|++|.+|..+|..+..+|.  ++++.+.+... +..+-...++.+... ..........|.   ++         
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~-~~~~g~a~Dl~~~~~-~~~~~~i~~~~~---~~---------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE-DDTVGQAADTNHGIA-YDSNTRVRQGGY---ED---------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH-HHHHHHHHHHHHHHT-TTCCCEEEECCG---GG---------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcc-cccceeecchhhccc-ccCCceEeeCCH---HH---------
Confidence            688999999999999999999986  68888874332 222222333433221 233333333332   21         


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                        ...-|++|..||.....    ..+.   .+.++.|..-.-.+.+.+..+ ..++.++.++-.
T Consensus        68 --~~~aDiVvitaG~~~~~----g~~R---~dl~~~N~~I~~~i~~~i~~~-~p~~i~ivvtNP  121 (142)
T d1o6za1          68 --TAGSDVVVITAGIPRQP----GQTR---IDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNP  121 (142)
T ss_dssp             --GTTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSS
T ss_pred             --hhhcCEEEEeccccccc----CCch---hhHHHHHHHHHHHHHHHHHhc-CCCceEEEecCh
Confidence              23789999999974322    1232   345666765555555555433 224566666543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.45  E-value=0.023  Score=41.51  Aligned_cols=86  Identities=16%  Similarity=0.187  Sum_probs=55.0

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHH
Q 039897           35 KPSNKLRGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDEN  112 (272)
Q Consensus        35 ~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (272)
                      .+...++..+|.|+|+ |.+|..+|..|..+|.  ++++++++.   +.++....++.+..............|.   + 
T Consensus        12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~---~~a~g~alDl~~~~~~~~~~~~~~~~d~---~-   83 (159)
T d2ldxa1          12 VPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADT---DKLRGEALDLQHGSLFLSTPKIVFGKDY---N-   83 (159)
T ss_dssp             SSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCH---HHHHHHHHHHHHTTTTCSCCEEEEESSG---G-
T ss_pred             cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCc---hhhhccHHHHhCcchhcCCCeEEeccch---h-
Confidence            3445577778999996 9999999999999876  699998873   3444444455543221222222222222   1 


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccccC
Q 039897          113 CKRVVDEVVNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       113 ~~~~~~~~~~~~g~ld~vI~~ag~~~  138 (272)
                                ....-|++|..||...
T Consensus        84 ----------~~~~adivvitag~~~   99 (159)
T d2ldxa1          84 ----------VSANSKLVIITAGARM   99 (159)
T ss_dssp             ----------GGTTEEEEEECCSCCC
T ss_pred             ----------hhccccEEEEeccccc
Confidence                      1246899999999754

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.43  E-value=0.062  Score=38.23  Aligned_cols=116  Identities=16%  Similarity=0.142  Sum_probs=66.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ++.|+|+ |.+|..++..|+..|  .++++.+++....+....   .+................  .+.+.         
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~---d~~~~~~~~~~~~~i~~~--~~~~~---------   66 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKAL---DMYESGPVGLFDTKVTGS--NDYAD---------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHH---HHHTTHHHHTCCCEEEEE--SCGGG---------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhh---hhhcccchhcccceEEec--CCHHH---------
Confidence            5788896 999999999999987  489999988654333222   222211111223333322  12221         


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                        ...-|++|.++|.....+    .+.   ...++.|..-...+.+.+..+ ..++-+++++-
T Consensus        67 --~~dadvvvitag~~~~~g----~~r---~~l~~~N~~i~~~i~~~i~~~-~p~aivivvtN  119 (142)
T d1guza1          67 --TANSDIVIITAGLPRKPG----MTR---EDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVSN  119 (142)
T ss_dssp             --GTTCSEEEECCSCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHH-CSSCEEEECCS
T ss_pred             --hcCCeEEEEEEecCCCCC----Cch---HHHHHHHHHHHHHHHHHhhcc-CCCeEEEEecC
Confidence              236899999999843221    222   234556666555566655544 23455666554

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.41  E-value=0.0087  Score=44.92  Aligned_cols=110  Identities=20%  Similarity=0.177  Sum_probs=70.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+.||++.|.|.+. ||+.+++.+...|++|+..++.....                 ..  ..       .+++++++ 
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~-----------------~~--~~-------~~~l~ell-   90 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKEG-----------------PW--RF-------TNSLEEAL-   90 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCCS-----------------SS--CC-------BSCSHHHH-
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccccc-----------------ce--ee-------eechhhhh-
Confidence            58999999999655 99999999999999999998864321                 10  00       11233333 


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHH
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLA  198 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la  198 (272)
                            ..-|+|+.+.........+  ++                   ...+..|+++..+|++|-.... .   -..|.
T Consensus        91 ------~~sDiv~~~~pl~~~t~~l--i~-------------------~~~l~~mk~~ailIN~~RG~iv-d---~~aL~  139 (181)
T d1qp8a1          91 ------REARAAVCALPLNKHTRGL--VK-------------------YQHLALMAEDAVFVNVGRAEVL-D---RDGVL  139 (181)
T ss_dssp             ------TTCSEEEECCCCSTTTTTC--BC-------------------HHHHTTSCTTCEEEECSCGGGB-C---HHHHH
T ss_pred             ------hccchhhcccccccccccc--cc-------------------cceeeeccccceEEeccccccc-c---chhhh
Confidence                  4689998877653322211  12                   3456778888889998843222 1   44555


Q ss_pred             HHHhhCCeE
Q 039897          199 LQLVERGIR  207 (272)
Q Consensus       199 ~e~~~~gi~  207 (272)
                      ..+....+.
T Consensus       140 ~aL~~~~i~  148 (181)
T d1qp8a1         140 RILKERPQF  148 (181)
T ss_dssp             HHHHHCTTC
T ss_pred             hhcccCcEE
Confidence            555554444

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.055  Score=38.75  Aligned_cols=116  Identities=17%  Similarity=0.143  Sum_probs=65.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc---CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALE---GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~---G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +|.|+|++|.+|.+++..|..+   +.++++.+..+.    .....-++.+..  ...... ......+   ..++    
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~----~~g~a~Dl~h~~--~~~~~~-~~~~~~~---~~~~----   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV----TPGVAVDLSHIP--TAVKIK-GFSGEDA---TPAL----   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT----HHHHHHHHHTSC--SSCEEE-EECSSCC---HHHH----
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc----chhHHHHHHCCc--cccCCc-EEEcCCC---cccc----
Confidence            6889999999999999988643   357999987532    222222343311  111111 1122222   2222    


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                          ..-|++|.++|.....+    .+.   .+.+..|..-.-.+.+.+..+- .++-++.++..
T Consensus        68 ----~~aDvvvitaG~~~k~g----~~R---~dl~~~N~~i~~~v~~~i~~~~-p~aivivvtNP  120 (145)
T d2cmda1          68 ----EGADVVLISAGVRRKPG----MDR---SDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNP  120 (145)
T ss_dssp             ----TTCSEEEECCSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred             ----CCCCEEEECCCccCCCC----cch---hhHHHHHHHHHHHHHHHHHhhC-CCcEEEEccCC
Confidence                25899999999853221    122   2336677766666666665542 34567776664

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.003  Score=48.07  Aligned_cols=45  Identities=24%  Similarity=0.285  Sum_probs=37.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEI   88 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~   88 (272)
                      |+|.|.|+ |-+|..+|..|+..|+.|++.+++++..+...+.++.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            68999998 7799999999999999999999997665555554443

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.38  E-value=0.0013  Score=47.95  Aligned_cols=39  Identities=18%  Similarity=0.274  Sum_probs=34.2

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           36 PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        36 ~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      ...+++||++||+|| |.+|..-++.|++.|++|.+++-.
T Consensus         7 l~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           7 LAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             hheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            346799999999999 559999999999999999998643

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.37  E-value=0.0038  Score=45.99  Aligned_cols=88  Identities=13%  Similarity=0.065  Sum_probs=52.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHH----HHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEIL----REAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +|.|.|. |-+|..+|+.|.+.|++|++.+|+++..+...+.- .+    .....-...++.++.+   -.+.+.+.+++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~-~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~   76 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ-LVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEK   76 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-SCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhh-ccceeeeecccccccccccccC---cHhhhhhhhhh
Confidence            4777765 99999999999999999999998854433222110 00    0000001223333322   35678888888


Q ss_pred             HHHhcCCccEEEEcccc
Q 039897          120 VVNAYGKIDILVNNAAV  136 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~  136 (272)
                      +......=.++++.++.
T Consensus        77 l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          77 LIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             HGGGSCTTCEEEECCSC
T ss_pred             hhhhcccccceeecccc
Confidence            87665555566665443

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.35  E-value=0.0032  Score=46.82  Aligned_cols=39  Identities=36%  Similarity=0.419  Sum_probs=36.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      ..+++||.++|.|-|.=+|+.++..|+++|++|..+..+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            357999999999999999999999999999999988765

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.31  E-value=0.0044  Score=47.13  Aligned_cols=118  Identities=19%  Similarity=0.219  Sum_probs=74.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.| .|.||+.+++.+...|++|+..++.........                     ..+....+++++
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------------------~~~~~~~~l~~l  101 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA---------------------LGLQRVSTLQDL  101 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH---------------------HTCEECSSHHHH
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh---------------------hccccccchhhc
Confidence            4569999999996 688999999999999999999887643321110                     011112245556


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.........+                     +.+.++..|+++.-+||+|=.... .   -.+
T Consensus       102 l~-------~sD~i~~~~plt~~T~~l---------------------i~~~~l~~mk~~a~lIN~sRG~iv-d---e~a  149 (193)
T d1mx3a1         102 LF-------HSDCVTLHCGLNEHNHHL---------------------INDFTVKQMRQGAFLVNTARGGLV-D---EKA  149 (193)
T ss_dssp             HH-------HCSEEEECCCCCTTCTTS---------------------BSHHHHTTSCTTEEEEECSCTTSB-C---HHH
T ss_pred             cc-------cCCEEEEeecccccchhh---------------------hhHHHHhccCCCCeEEecCCceEE-c---HHH
Confidence            55       368887777653332221                     234556778888888888865333 2   455


Q ss_pred             HHHHHhhCCeEE
Q 039897          197 LALQLVERGIRV  208 (272)
Q Consensus       197 la~e~~~~gi~v  208 (272)
                      |...+....|.-
T Consensus       150 L~~aL~~~~i~~  161 (193)
T d1mx3a1         150 LAQALKEGRIRG  161 (193)
T ss_dssp             HHHHHHHTSEEE
T ss_pred             HHHHHHcCCceE
Confidence            555555554543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=96.30  E-value=0.049  Score=44.41  Aligned_cols=148  Identities=12%  Similarity=0.070  Sum_probs=85.5

Q ss_pred             CCCcEEEEEcCCC-chHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           40 LRGKVALVTGGDS-GIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~-gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      -.|++||=..+.. +++.    +.+..|+ .|+.++.+....+..++.++..    .....++.++..|+.      +++
T Consensus       143 ~~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n----~l~~~~~~~i~~d~~------~~l  208 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEAN----HLDMANHQLVVMDVF------DYF  208 (317)
T ss_dssp             TBTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHT----TCCCTTEEEEESCHH------HHH
T ss_pred             hCCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHh----cccCcceEEEEccHH------HHH
Confidence            4688998776554 4443    2445787 5999998866554444433221    112356788888763      455


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChh-HHH
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPE-ARG  196 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~  196 (272)
                      +.......+.|+||.....+..... ...+.          ......+++.++++++++|.+++.+..... .... ...
T Consensus       209 ~~~~~~~~~fD~Ii~DPP~f~~~~~-~~~~~----------~~~~~~L~~~a~~ll~pgG~l~~~scs~~~-~~~~f~~~  276 (317)
T d2b78a2         209 KYARRHHLTYDIIIIDPPSFARNKK-EVFSV----------SKDYHKLIRQGLEILSENGLIIASTNAANM-TVSQFKKQ  276 (317)
T ss_dssp             HHHHHTTCCEEEEEECCCCC------CCCCH----------HHHHHHHHHHHHHTEEEEEEEEEEECCTTS-CHHHHHHH
T ss_pred             HHHHhhcCCCCEEEEcChhhccchh-HHHHH----------HHHHHHHHHHHHHHcCCCCEEEEEeCCccC-CHHHHHHH
Confidence            5555555689999998765432211 11111          223456778888888888877765554332 2222 334


Q ss_pred             HHHHHhhCCeEEEEEec
Q 039897          197 LALQLVERGIRVNGVAP  213 (272)
Q Consensus       197 la~e~~~~gi~vn~i~P  213 (272)
                      +...+.+.+.++..+..
T Consensus       277 v~~a~~~~~~~~~~~~~  293 (317)
T d2b78a2         277 IEKGFGKQKHTYLDLQQ  293 (317)
T ss_dssp             HHHHHTTCCCEEEEEEC
T ss_pred             HHHHHHHcCCeEEEecc
Confidence            44555666777766643

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.29  E-value=0.0033  Score=48.17  Aligned_cols=38  Identities=26%  Similarity=0.343  Sum_probs=34.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+|+||+|+|.| .|.+|..+|+.|.+.|++|++++.+.
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~   60 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDT   60 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchH
Confidence            369999999997 77899999999999999999998863

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=96.25  E-value=0.027  Score=46.04  Aligned_cols=122  Identities=16%  Similarity=0.160  Sum_probs=75.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ...+|++||=.++..| |.++  +++..+.+|+.++.++...+..++.+...      .-.++.++..|..      ++.
T Consensus       142 ~~~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~n------gl~~~~~i~~d~~------~~~  206 (318)
T d1wxxa2         142 ERFRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLN------GLGNVRVLEANAF------DLL  206 (318)
T ss_dssp             GGCCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHT------TCTTEEEEESCHH------HHH
T ss_pred             HHhCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHc------CCCCcceeeccHH------HHh
Confidence            3468999998876554 3333  24556779999999865554444433321      2245777887764      344


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +.+....+..|.||.+........    ....       .-......++..+..+++.+|.+++.+..
T Consensus       207 ~~~~~~~~~fD~Vi~DpP~~~~~~----~~~~-------~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         207 RRLEKEGERFDLVVLDPPAFAKGK----KDVE-------RAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             HHHHHTTCCEEEEEECCCCSCCST----TSHH-------HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             hhhHhhhcCCCEEEEcCCccccch----HHHH-------HHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            455445568999999987543221    1111       11223456788888889998988776654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.007  Score=48.99  Aligned_cols=25  Identities=24%  Similarity=0.344  Sum_probs=22.4

Q ss_pred             CCchHHHHHHHHHHcCCeEEEEecc
Q 039897           51 DSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        51 s~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      ||..|.++|+.|..+|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4789999999999999999998654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.21  E-value=0.0031  Score=46.79  Aligned_cols=40  Identities=15%  Similarity=0.285  Sum_probs=33.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhh
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKD   81 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~   81 (272)
                      ++|.|||.|+ ||.+++++..|.+.|+ ++.++.|+.+..+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~   56 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQY   56 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHH
Confidence            5789999987 8889999999999997 68898887544333

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.21  E-value=0.11  Score=36.74  Aligned_cols=114  Identities=15%  Similarity=0.121  Sum_probs=63.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ++.|+|+ |++|..++..++.++.  ++++.+++..   .++....++..... ..........|   .++         
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~---~~~g~~~Dl~~~~~-~~~~~~~~~~~---~~~---------   64 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKK---RAEGDALDLIHGTP-FTRRANIYAGD---YAD---------   64 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH---HHHHHHHHHHHHGG-GSCCCEEEECC---GGG---------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccc---cccchhcccccccc-ccccccccCCc---HHH---------
Confidence            5778896 8999999999998874  7999998743   33333344433221 12233333322   221         


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                        ...-|++|.+||.....    ..+..   +.+..|+.=...+.+.+..+ ..++.+++++-
T Consensus        65 --~~~adivvitag~~~~~----g~~r~---dl~~~N~~I~~~i~~~i~~~-~p~aivivvtN  117 (140)
T d1a5za1          65 --LKGSDVVIVAAGVPQKP----GETRL---QLLGRNARVMKEIARNVSKY-APDSIVIVVTN  117 (140)
T ss_dssp             --GTTCSEEEECCCCCCCS----SCCHH---HHHHHHHHHHHHHHHHHHHH-CTTCEEEECSS
T ss_pred             --hcCCCEEEEecccccCC----Ccchh---hhhccccchHHHHHHHHHhc-CCCcEEEEeCC
Confidence              13689999999985432    22332   23455554334444444332 22456666554

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.19  E-value=0.011  Score=44.93  Aligned_cols=114  Identities=16%  Similarity=0.146  Sum_probs=70.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++.||++.|.| .|.||+.+|+.|...|++|+..++.......         .    ..     +.     ..++++++
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---------~----~~-----~~-----~~~l~~~l   94 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE---------K----KG-----YY-----VDSLDDLY   94 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---------H----TT-----CB-----CSCHHHHH
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc---------c----ce-----ee-----eccccccc
Confidence            569999999998 6789999999999999999988775432110         0    11     11     12355555


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHH
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGL  197 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~l  197 (272)
                      .       .-|+|+.+.........  -++                   +.++..|+++..+||+|=.... .   -.+|
T Consensus        95 ~-------~sDii~~~~plt~~T~~--li~-------------------~~~l~~mk~~a~lIN~sRG~iv-d---e~aL  142 (197)
T d1j4aa1          95 K-------QADVISLHVPDVPANVH--MIN-------------------DESIAKMKQDVVIVNVSRGPLV-D---TDAV  142 (197)
T ss_dssp             H-------HCSEEEECSCCCGGGTT--CBS-------------------HHHHHHSCTTEEEEECSCGGGB-C---HHHH
T ss_pred             c-------ccccccccCCccccccc--ccc-------------------HHHHhhhCCccEEEecCchhhh-h---hHHH
Confidence            4       37988887765332211  122                   2334667887778887653222 2   4555


Q ss_pred             HHHHhhCCeE
Q 039897          198 ALQLVERGIR  207 (272)
Q Consensus       198 a~e~~~~gi~  207 (272)
                      ...+....|.
T Consensus       143 ~~aL~~~~i~  152 (197)
T d1j4aa1         143 IRGLDSGKIF  152 (197)
T ss_dssp             HHHHHHTSEE
T ss_pred             HHHHhcccch
Confidence            5555555454

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.18  E-value=0.032  Score=45.66  Aligned_cols=146  Identities=14%  Similarity=0.080  Sum_probs=83.6

Q ss_pred             CCcEEEEEcCC-CchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           41 RGKVALVTGGD-SGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas-~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .|++||=.++. |+++.+    ++..|+ +|+.++.++...+..++.+....     ...++.++..|+.      +...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ng-----l~~~~~~~~~d~~------~~~~  209 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNG-----VEDRMKFIVGSAF------EEME  209 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTT-----CGGGEEEEESCHH------HHHH
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcC-----CCccceeeechhh------hhhH
Confidence            38899988865 444443    445676 69999998555444443332211     2335667777653      3445


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHH
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLA  198 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la  198 (272)
                      .+.....++|+||.+.......       ....    ..-......++...++.++.+|.+++.+.............+.
T Consensus       210 ~~~~~~~~fD~Vi~DpP~~~~~-------~~~~----~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~~~~~~~f~~~v~  278 (324)
T d2as0a2         210 KLQKKGEKFDIVVLDPPAFVQH-------EKDL----KAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMII  278 (324)
T ss_dssp             HHHHTTCCEEEEEECCCCSCSS-------GGGH----HHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred             HHHhccCCCCchhcCCccccCC-------HHHH----HHHHHHHHHHHHHHHHHcCCCcEEEEEeCCccCCHHHHHHHHH
Confidence            5555556899999988764321       1111    1123345668888889999999888877554332211123333


Q ss_pred             HHHhhCCeEEEEEe
Q 039897          199 LQLVERGIRVNGVA  212 (272)
Q Consensus       199 ~e~~~~gi~vn~i~  212 (272)
                      ....+.|-++..+.
T Consensus       279 ~a~~~~gr~~~~~~  292 (324)
T d2as0a2         279 AAGAKAGKFLKMLE  292 (324)
T ss_dssp             HHHHHTTEEEEESS
T ss_pred             HHHHHcCCeEEEee
Confidence            33444455555553

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.17  E-value=0.12  Score=36.74  Aligned_cols=115  Identities=10%  Similarity=0.078  Sum_probs=66.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ++.|+|+ |.+|..+|..|+.+|.  ++++.++++.   .++....++........ .......  .+.++    +    
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~---~~~g~a~Dl~~a~~~~~-~~~i~~~--~~~~~----~----   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKE---RVEAEVLDMQHGSSFYP-TVSIDGS--DDPEI----C----   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHH---HHHHHHHHHHHTGGGST-TCEEEEE--SCGGG----G----
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccc---cchhHHHHHHhccccCC-CceeecC--CCHHH----h----
Confidence            5778896 9999999999999987  6999998743   33333344444322122 2222211  11111    1    


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                         ..-|++|..||.....    ..+..   +.+..|..-.-.+.+.+..+ ..++-++.+|-
T Consensus        68 ---~daDvVVitaG~~~~~----g~~R~---dl~~~N~~i~~~i~~~i~~~-~p~ai~ivvtN  119 (143)
T d1llda1          68 ---RDADMVVITAGPRQKP----GQSRL---ELVGATVNILKAIMPNLVKV-APNAIYMLITN  119 (143)
T ss_dssp             ---TTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred             ---hCCcEEEEecccccCC----CCchh---hhhhhhHHHHHHHHHHHHhh-CCCeEEEEeCC
Confidence               2579999999984321    23333   34666765555555555443 22455566554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.10  E-value=0.044  Score=39.07  Aligned_cols=35  Identities=17%  Similarity=0.203  Sum_probs=29.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccch
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQE   78 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~   78 (272)
                      |+|.|+|+ |.+|.++|..|+.++. ++++++.+...
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~   37 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV   37 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence            57788896 9999999999998875 88898887543

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.08  E-value=0.028  Score=40.18  Aligned_cols=116  Identities=11%  Similarity=0.064  Sum_probs=62.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      ++|.|+|+ |.+|..++..++.+|.  ++++++++....+   ....++.+... ..........   ++          
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~---g~a~Dl~~~~~-~~~~~~~~~~---~~----------   63 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAI---GEAMDINHGLP-FMGQMSLYAG---DY----------   63 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CC---HHHHHHTTSCC-CTTCEEEC-----CG----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccc---eeeeeeccCcc-cCCCeeEeeC---cH----------
Confidence            46777797 9999999999999876  7999998754322   22223322110 1111111111   11          


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                       +....-|++|..||.....    ..+.   ...+..|+.-...+.+.+..+ ..++-+++++-.
T Consensus        64 -~~~~~adivvitag~~~~~----~~~r---~~l~~~N~~i~~~i~~~i~~~-~p~ai~ivvtNP  119 (142)
T d1y6ja1          64 -SDVKDCDVIVVTAGANRKP----GETR---LDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNP  119 (142)
T ss_dssp             -GGGTTCSEEEECCCC----------CH---HHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSS
T ss_pred             -HHhCCCceEEEecccccCc----Ccch---hHHhhHHHHHHHHHHHHhhcc-CCCceEEEecCh
Confidence             1234689999999975321    1222   344666766555555555543 234556666553

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.00  E-value=0.056  Score=39.06  Aligned_cols=118  Identities=9%  Similarity=0.054  Sum_probs=61.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-------TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-------~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      +|.|+||+|.+|++++..|++.+.       .+++.+.+ +..+.++...-++...   .....  ......+.  ..+.
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~-~~~~~~~~l~~~~~~~---~~~~~--~~~~~~~~--~~~~   76 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT-PMMGVLDGVLMELQDC---ALPLL--KDVIATDK--EEIA   76 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG-GGHHHHHHHHHHHHHT---CCTTE--EEEEEESC--HHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCc-cchhhhhhhhhhhccc---ccccc--cccccCcc--cccc
Confidence            899999999999999999986542       34555443 2233333333333321   11111  12222111  1112


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEec
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT  183 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vs  183 (272)
                             ....|++|..+|.....+    .+.+   ..++.|..-...+...+..+-.+.+.++.+|
T Consensus        77 -------~~~~dvVVitag~~~~~g----~sr~---dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          77 -------FKDLDVAILVGSMPRRDG----MERK---DLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             -------TTTCSEEEECCSCCCCTT----CCTT---TTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -------cCCceEEEEecccCCCCC----Cchh---HHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence                   247999999999854321    1221   2355666555555555544323334455554

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.98  E-value=0.033  Score=41.67  Aligned_cols=120  Identities=20%  Similarity=0.194  Sum_probs=76.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.| .|.||+++++.+...|.+|+..++.........            ..  +.     .   .+++++
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~------------~~--~~-----~---~~l~el   95 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ------------LG--IE-----L---LSLDDL   95 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH------------HT--CE-----E---CCHHHH
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh------------cC--ce-----e---ccHHHH
Confidence            3568999999998 689999999999999999999887643321110            00  11     1   234455


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.........                     .+.+.++..|+++..+||+|=..-..    -.+
T Consensus        96 l~-------~sDiv~~~~Plt~~T~~---------------------lin~~~l~~mk~~a~lIN~sRG~iVd----e~a  143 (184)
T d1ygya1          96 LA-------RADFISVHLPKTPETAG---------------------LIDKEALAKTKPGVIIVNAARGGLVD----EAA  143 (184)
T ss_dssp             HH-------HCSEEEECCCCSTTTTT---------------------CBCHHHHTTSCTTEEEEECSCTTSBC----HHH
T ss_pred             Hh-------hCCEEEEcCCCCchhhh---------------------hhhHHHHhhhCCCceEEEecchhhhh----hHH
Confidence            54       37888777765332222                     12234567788888888887643332    466


Q ss_pred             HHHHHhhCCeEEEEE
Q 039897          197 LALQLVERGIRVNGV  211 (272)
Q Consensus       197 la~e~~~~gi~vn~i  211 (272)
                      |...+....|.--++
T Consensus       144 L~~aL~~~~i~~a~l  158 (184)
T d1ygya1         144 LADAITGGHVRAAGL  158 (184)
T ss_dssp             HHHHHHTSSEEEEEE
T ss_pred             HHHHHhcCcEeEEEE
Confidence            666666665654444

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.92  E-value=0.0049  Score=46.06  Aligned_cols=47  Identities=17%  Similarity=0.316  Sum_probs=36.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETL   86 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~   86 (272)
                      .+++||.|||.|+ ||.+++++..|.+.| +|.++.|+.++.+.+.+.+
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            4589999999986 567999999998777 9999999855544444333

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.91  E-value=0.026  Score=42.88  Aligned_cols=115  Identities=16%  Similarity=0.187  Sum_probs=71.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.| .|.||+.+++.|...|++|+..++.....                ....     .+.   .+++++
T Consensus        40 ~~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~----------------~~~~-----~~~---~~l~~l   94 (199)
T d1dxya1          40 GKELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKG----------------DHPD-----FDY---VSLEDL   94 (199)
T ss_dssp             CCCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSS----------------CCTT-----CEE---CCHHHH
T ss_pred             cccccceeeeeee-cccccccccccccccceeeeccCCccchh----------------hhcc-----hhH---HHHHHH
Confidence            3569999999998 57799999999999999999988763321                1111     111   234555


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+++.+.........+                     +.+.++..|+++..+||++=....    ...+
T Consensus        95 ~~-------~~D~v~~~~plt~~T~~l---------------------i~~~~l~~mk~~a~lIN~aRG~vv----de~a  142 (199)
T d1dxya1          95 FK-------QSDVIDLHVPGIEQNTHI---------------------INEAAFNLMKPGAIVINTARPNLI----DTQA  142 (199)
T ss_dssp             HH-------HCSEEEECCCCCGGGTTS---------------------BCHHHHHHSCTTEEEEECSCTTSB----CHHH
T ss_pred             HH-------hcccceeeeccccccccc---------------------ccHHHhhccCCceEEEecccHhhh----hhHH
Confidence            55       368887766543322221                     123456678888888888753222    1455


Q ss_pred             HHHHHhhCCeEE
Q 039897          197 LALQLVERGIRV  208 (272)
Q Consensus       197 la~e~~~~gi~v  208 (272)
                      |...+....|.-
T Consensus       143 L~~aL~~g~i~g  154 (199)
T d1dxya1         143 MLSNLKSGKLAG  154 (199)
T ss_dssp             HHHHHHTTSEEE
T ss_pred             HHHHHhcCCcce
Confidence            555555554543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.89  E-value=0.061  Score=38.72  Aligned_cols=122  Identities=11%  Similarity=0.083  Sum_probs=65.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      .+|.|+|+ |++|..++..|.+.+. ++++++++....+..   ..++.........+......+-  .           
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~---a~Dl~~~~~~~~~~~~v~~~~~--~-----------   66 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGK---ALDTSHTNVMAYSNCKVSGSNT--Y-----------   66 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHH---HHHHHTHHHHHTCCCCEEEECC--G-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceee---ecchhhhccccCCCcEEEeccc--c-----------
Confidence            47888895 9999999988887775 688999875443322   2233222111223333333221  1           


Q ss_pred             HhcCCccEEEEcccccCCCCCc-ccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          122 NAYGKIDILVNNAAVQYKAGSV-EEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                      +....-|++|.++|.....+.- ...+.   ...+..|..-...+.+.+..+ ..++-+++++-.
T Consensus        67 ~~~~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~~iv~~i~~~i~~~-~p~aivivvtNP  127 (150)
T d1t2da1          67 DDLAGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNNKIMIEIGGHIKKN-CPNAFIIVVTNP  127 (150)
T ss_dssp             GGGTTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSSS
T ss_pred             cccCCCcEEEEecccccCCCCCccccch---hHHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCc
Confidence            1224689999999975432111 11111   223555654444444444433 224556666554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.88  E-value=0.0046  Score=46.71  Aligned_cols=44  Identities=18%  Similarity=0.204  Sum_probs=35.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLE   87 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~   87 (272)
                      |+|.|.|+ |-+|..+|..|+..|++|++.+++++..+...+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            46889998 889999999999999999999998665554444433

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.83  E-value=0.0085  Score=44.13  Aligned_cols=41  Identities=24%  Similarity=0.259  Sum_probs=37.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .++.||+++|.|.|.-+|+.++..|.++|++|.++.....+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~   73 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN   73 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccch
Confidence            56999999999999999999999999999999999776444

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.79  E-value=0.0082  Score=44.48  Aligned_cols=41  Identities=22%  Similarity=0.265  Sum_probs=37.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      .++.||.++|.|-|.=+|+.++..|.++|++|.++.....+
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~   75 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH   75 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc
Confidence            56999999999999999999999999999999999876444

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.76  E-value=0.011  Score=44.64  Aligned_cols=122  Identities=14%  Similarity=0.193  Sum_probs=75.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.||++.|.| .|.||+.+++.+...|.+|+..++...........                    .....++++++
T Consensus        42 ~~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~--------------------~~~~~~~l~~l  100 (191)
T d1gdha1          42 GEKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY--------------------QATFHDSLDSL  100 (191)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH--------------------TCEECSSHHHH
T ss_pred             cceecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhcc--------------------cccccCCHHHH
Confidence            4568999999997 57899999999999999999988764432211100                    00111234555


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +.       .-|+|+.+.........+                     +.+.++..|+++..+||+|=..-. .   -.+
T Consensus       101 l~-------~sD~v~l~~plt~~T~~l---------------------i~~~~l~~mk~~a~lIN~sRG~iv-d---e~a  148 (191)
T d1gdha1         101 LS-------VSQFFSLNAPSTPETRYF---------------------FNKATIKSLPQGAIVVNTARGDLV-D---NEL  148 (191)
T ss_dssp             HH-------HCSEEEECCCCCTTTTTC---------------------BSHHHHTTSCTTEEEEECSCGGGB-C---HHH
T ss_pred             Hh-------hCCeEEecCCCCchHhhe---------------------ecHHHhhCcCCccEEEecCCccch-h---hHH
Confidence            55       368887776653322211                     223456678888888888754222 1   456


Q ss_pred             HHHHHhhCCeEEEEE
Q 039897          197 LALQLVERGIRVNGV  211 (272)
Q Consensus       197 la~e~~~~gi~vn~i  211 (272)
                      |...+....|.-.++
T Consensus       149 L~~aL~~g~i~~a~l  163 (191)
T d1gdha1         149 VVAALEAGRLAYAGF  163 (191)
T ss_dssp             HHHHHHHTSEEEEEE
T ss_pred             HHHHHHcCCceEEEE
Confidence            666666665554433

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.66  E-value=0.0086  Score=45.20  Aligned_cols=118  Identities=17%  Similarity=0.161  Sum_probs=73.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      ..++.++++.|.| .|.||.++++.|...|.+|+..++.......... .          .         +....+++++
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~----------~---------~~~~~~l~~~   97 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-L----------N---------LTWHATREDM   97 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-H----------T---------CEECSSHHHH
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc-c----------c---------ccccCCHHHH
Confidence            4568999999998 6789999999999999999999886443221111 0          0         1111233344


Q ss_pred             HHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHH
Q 039897          117 VDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARG  196 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  196 (272)
                      +       ..-|+|+.+.........                     .+...++..|+++..+||+|-.....    -.+
T Consensus        98 l-------~~sD~v~~~~plt~~T~~---------------------li~~~~l~~mk~ga~lIN~aRG~ivd----~~a  145 (188)
T d2naca1          98 Y-------PVCDVVTLNCPLHPETEH---------------------MINDETLKLFKRGAYIVNTARGKLCD----RDA  145 (188)
T ss_dssp             G-------GGCSEEEECSCCCTTTTT---------------------CBSHHHHTTSCTTEEEEECSCGGGBC----HHH
T ss_pred             H-------Hhccchhhcccccccchh---------------------hhHHHHHHhCCCCCEEEecCchhhhh----HHH
Confidence            4       358888777665332211                     12344667788888888887654332    355


Q ss_pred             HHHHHhhCCeE
Q 039897          197 LALQLVERGIR  207 (272)
Q Consensus       197 la~e~~~~gi~  207 (272)
                      |-..+....+.
T Consensus       146 L~~aL~~g~i~  156 (188)
T d2naca1         146 VARALESGRLA  156 (188)
T ss_dssp             HHHHHHTTSEE
T ss_pred             HHHHHhCCCce
Confidence            55555555454

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.096  Score=39.08  Aligned_cols=116  Identities=17%  Similarity=0.171  Sum_probs=74.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++.++++.|. |.|.||+.+++.+...|.+|+..++.....                 ...  ....     +++++++
T Consensus        40 ~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~-----------------~~~--~~~~-----~~l~ell   94 (188)
T d1sc6a1          40 FEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLP-----------------LGN--ATQV-----QHLSDLL   94 (188)
T ss_dssp             CCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCC-----------------CTT--CEEC-----SCHHHHH
T ss_pred             ccccceEEEEe-ecccchhhhhhhcccccceEeeccccccch-----------------hhh--hhhh-----hhHHHHH
Confidence            46899999999 478899999999999999999998753221                 111  1111     2445555


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHH
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGL  197 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~l  197 (272)
                      .       .-|+++.+.........                     .+.+.++..|+++..+||++-..-..    -.+|
T Consensus        95 ~-------~sDii~i~~plt~~T~~---------------------li~~~~l~~mk~~a~lIN~aRG~lvd----e~aL  142 (188)
T d1sc6a1          95 N-------MSDVVSLHVPENPSTKN---------------------MMGAKEISLMKPGSLLINASRGTVVD----IPAL  142 (188)
T ss_dssp             H-------HCSEEEECCCSSTTTTT---------------------CBCHHHHHHSCTTEEEEECSCSSSBC----HHHH
T ss_pred             h-------hccceeecccCCcchhh---------------------hccHHHHhhCCCCCEEEEcCcHHhhh----hHHH
Confidence            4       36888887765432221                     12334567778888888888754332    4566


Q ss_pred             HHHHhhCCeEEEE
Q 039897          198 ALQLVERGIRVNG  210 (272)
Q Consensus       198 a~e~~~~gi~vn~  210 (272)
                      ...+....+.-.+
T Consensus       143 ~~aL~~~~~~~a~  155 (188)
T d1sc6a1         143 ADALASKHLAGAA  155 (188)
T ss_dssp             HHHHHTTSEEEEE
T ss_pred             HHHHHcCCceEEE
Confidence            6666555444333

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.47  E-value=0.034  Score=39.02  Aligned_cols=73  Identities=15%  Similarity=0.284  Sum_probs=53.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFT-YVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      ++.|.|++|..|+++++.+.+.|+.++.. +.+...  .               -.+.. +-.|++.++.+.+.++...+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~---------------~~~~D-VvIDFS~p~~~~~~l~~~~~   63 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--E---------------LDSPD-VVIDFSSPEALPKTVDLCKK   63 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--E---------------CSCCS-EEEECSCGGGHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--H---------------hccCC-EEEEecCHHHHHHHHHHHHh
Confidence            58999999999999999999999987654 332111  1               11222 46799999999999998876


Q ss_pred             hcCCccEEEEcccc
Q 039897          123 AYGKIDILVNNAAV  136 (272)
Q Consensus       123 ~~g~ld~vI~~ag~  136 (272)
                      .  ++.+|+-..|+
T Consensus        64 ~--~~p~ViGTTG~   75 (128)
T d1vm6a3          64 Y--RAGLVLGTTAL   75 (128)
T ss_dssp             H--TCEEEECCCSC
T ss_pred             c--CCCEEEEcCCC
Confidence            5  46667666665

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.44  E-value=0.022  Score=41.85  Aligned_cols=106  Identities=14%  Similarity=0.193  Sum_probs=69.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ...-+|+|.|+. -.|..-++.....|+.|.+++.+.+..+.++...          ...+.+   -..+.+.+.+.+. 
T Consensus        30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~----------~~~~~~---~~~~~~~l~~~~~-   94 (168)
T d1pjca1          30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF----------GSRVEL---LYSNSAEIETAVA-   94 (168)
T ss_dssp             BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGSEE---EECCHHHHHHHHH-
T ss_pred             CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhh----------ccccee---ehhhhhhHHHhhc-
Confidence            345689999875 4588888989999999999999855444433322          222332   2344555554443 


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                            .-|+||.++-+.....|                    ..+++..+..||++.-||-++.-.
T Consensus        95 ------~aDivI~aalipG~~aP--------------------~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1          95 ------EADLLIGAVLVPGRRAP--------------------ILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             ------TCSEEEECCCCTTSSCC--------------------CCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             ------cCcEEEEeeecCCcccC--------------------eeecHHHHhhcCCCcEEEEeecCC
Confidence                  58999999987543322                    233555677889888888887643

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.38  E-value=0.022  Score=44.37  Aligned_cols=107  Identities=16%  Similarity=0.143  Sum_probs=69.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ....+++||=.|.+.|.   ++..|+++|.+|+.++.++...+.+++..   ..    .+.++.++..|+.+.+      
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~---~~----~~~~v~~~~~d~~~~~------   97 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKF---RS----QGLKPRLACQDISNLN------   97 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHH---HH----TTCCCEEECCCGGGCC------
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccc---cc----cCccceeeccchhhhc------
Confidence            34667899999988774   67788899999999988755433333222   22    4567889998886532      


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEE
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIIN  181 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~  181 (272)
                           ..+..|+|++..+.....     .+.++...           +++.+...|+++|.+|+
T Consensus        98 -----~~~~fD~i~~~~~~~~~~-----~~~~~~~~-----------~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_          98 -----INRKFDLITCCLDSTNYI-----IDSDDLKK-----------YFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             -----CSCCEEEEEECTTGGGGC-----CSHHHHHH-----------HHHHHHTTEEEEEEEEE
T ss_pred             -----ccccccccceeeeeeecc-----CCHHHHHH-----------HHHHHHHhCCCCeEEEE
Confidence                 125799998754432221     23333333           45667778888888775

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.38  E-value=0.0097  Score=43.41  Aligned_cols=35  Identities=17%  Similarity=0.063  Sum_probs=31.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE   79 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~   79 (272)
                      +|+|.|+ |.+|..++..|++.|++|.+++|+.+..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            6899988 9999999999999999999999986543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.36  E-value=0.075  Score=36.14  Aligned_cols=69  Identities=16%  Similarity=0.104  Sum_probs=52.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ..++.|.| +|-+|+-++....+.|+++++.+.+......               ..--.++..|..|.+.+.+++... 
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~---------------~va~~~i~~~~~d~~~l~~~~~~~-   73 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM---------------HVAHRSHVINMLDGDALRRVVELE-   73 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG---------------GGSSEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh---------------hcCCeEEECCCCCHHHHHHHHHhh-
Confidence            34799999 6789999999999999999999887543211               112357889999999888887653 


Q ss_pred             HhcCCccEEE
Q 039897          122 NAYGKIDILV  131 (272)
Q Consensus       122 ~~~g~ld~vI  131 (272)
                          .+|++.
T Consensus        74 ----~~DviT   79 (111)
T d1kjqa2          74 ----KPHYIV   79 (111)
T ss_dssp             ----CCSEEE
T ss_pred             ----CCceEE
Confidence                578774

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.0096  Score=50.88  Aligned_cols=36  Identities=25%  Similarity=0.331  Sum_probs=31.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      .|++.+|||.|+ ||||.++++.|+..|. ++.++|.+
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            478899999998 6799999999999998 68888754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.27  E-value=0.0093  Score=46.49  Aligned_cols=38  Identities=26%  Similarity=0.370  Sum_probs=33.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+|+||+|+|-| .|.+|..+|+.|.+.|++|++++.+.
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccH
Confidence            459999999987 67889999999999999999998873

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.23  E-value=0.05  Score=39.92  Aligned_cols=80  Identities=14%  Similarity=0.125  Sum_probs=46.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH-HHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE-NCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~  117 (272)
                      -.|.+|+|.|+ ||+|...+..+...|+ +|++++++.++.+..++           .+. ..++  |.++.+ ...+..
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-----------~GA-d~~i--n~~~~~~~~~~~~   91 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-----------FGA-TDFV--NPNDHSEPISQVL   91 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----------TTC-CEEE--CGGGCSSCHHHHH
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-----------cCC-cEEE--cCCCcchhHHHHH
Confidence            45789999986 6678888888888877 57777776444322211           232 2233  222222 122222


Q ss_pred             HHHHHhcCCccEEEEcccc
Q 039897          118 DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~  136 (272)
                      ...  ..+++|+++-+.|.
T Consensus        92 ~~~--~~~G~d~vid~~G~  108 (175)
T d1cdoa2          92 SKM--TNGGVDFSLECVGN  108 (175)
T ss_dssp             HHH--HTSCBSEEEECSCC
T ss_pred             Hhh--ccCCcceeeeecCC
Confidence            221  12579999999986

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.17  E-value=0.026  Score=42.04  Aligned_cols=110  Identities=22%  Similarity=0.181  Sum_probs=67.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChH----------
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDE----------  111 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----------  111 (272)
                      .-+|+|.|+. -.|..-++-....|++|.+.|.+....+.++...             ..++..+..+.+          
T Consensus        29 pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~-------------~~~i~~~~~~~~~~~~~~gyA~   94 (183)
T d1l7da1          29 PARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVESLG-------------GKFITVDDEAMKTAETAGGYAK   94 (183)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT-------------CEECCC----------------
T ss_pred             CcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh-------------cceEEEeccccccccccccchh
Confidence            3488899865 4588999999999999999999876665554321             112222211111          


Q ss_pred             -----HHHHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCC
Q 039897          112 -----NCKRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSV  185 (272)
Q Consensus       112 -----~~~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~  185 (272)
                           .....-+.+.+....-|+||..+-+.....|                    ..+++..+..||++.-||-++.-
T Consensus        95 ~~s~~~~~~~~~~l~~~l~~aDlVI~talipG~~aP--------------------~lit~~mv~~Mk~GSVIVDvaid  153 (183)
T d1l7da1          95 EMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAP--------------------VLITEEMVTKMKPGSVIIDLAVE  153 (183)
T ss_dssp             -------CCHHHHHHHHHTTCSEEEECCCCTTSCCC--------------------CCSCHHHHTTSCTTCEEEETTGG
T ss_pred             hcCHHHHHHHHHHHHHHHHhhhhheeeeecCCcccc--------------------eeehHHHHHhcCCCcEEEEEeec
Confidence                 1112223333444679999999987544322                    22355566788887778877753

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.12  E-value=0.0059  Score=44.80  Aligned_cols=88  Identities=10%  Similarity=0.097  Sum_probs=50.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHH----HHHHhhhcCCCCceEEeccCCChHHHHHHH--
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLE----ILREAKTSDAKDPMAISADLGFDENCKRVV--  117 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--  117 (272)
                      +|-|.| .|-+|.++|+.|++.|++|++.+|+++..+.+.+.-.    ...+..    .+...+-.=+.+.+.+++.+  
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~----~~~d~ii~~v~~~~~v~~v~~~   76 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIA----EQCDVIITMLPNSPHVKEVALG   76 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHH----HHCSEEEECCSSHHHHHHHHHS
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHH----hCCCeEEEEcCCHHHHHHHHhC
Confidence            355665 5889999999999999999999998554443322100    001111    01233444456667777665  


Q ss_pred             -HHHHHhcCCccEEEEcccc
Q 039897          118 -DEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       118 -~~~~~~~g~ld~vI~~ag~  136 (272)
                       +.+.....+=.++|.+...
T Consensus        77 ~~~~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          77 ENGIIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             TTCHHHHCCTTCEEEECSCC
T ss_pred             CcchhhccCCCCEEEECCCC
Confidence             3344333334556655544

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.07  E-value=0.11  Score=40.11  Aligned_cols=104  Identities=14%  Similarity=0.035  Sum_probs=66.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.+++||=.|++.|   .++..|+++|++|+.++.++.-.+.+++...   +    .+.++.++..|+.+..-       
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~---~----~~~~i~~~~~d~~~l~~-------  102 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAK---E----RNLKIEFLQGDVLEIAF-------  102 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHH---H----TTCCCEEEESCGGGCCC-------
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccc---c----ccccchheehhhhhccc-------
Confidence            34578999998876   4466788999999999988544433333222   2    45578899999866431       


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEE
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIIN  181 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~  181 (272)
                          -+..|+|++.-+....      .+.++..           .+++.+...|+++|.+++
T Consensus       103 ----~~~fD~I~~~~~~~~~------~~~~~~~-----------~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         103 ----KNEFDAVTMFFSTIMY------FDEEDLR-----------KLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             ----CSCEEEEEECSSGGGG------SCHHHHH-----------HHHHHHHHHEEEEEEEEE
T ss_pred             ----ccccchHhhhhhhhhc------CChHHHH-----------HHHHHHHHHcCCCcEEEE
Confidence                1468988875443221      1233322           234556677888888765

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.06  E-value=0.33  Score=39.09  Aligned_cols=122  Identities=14%  Similarity=0.003  Sum_probs=68.8

Q ss_pred             CCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSG-IGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~g-IG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      ++++||=..+..| ++.    ++++.|++|+.++.+....+..++.++..    .....++.++..|+.      ++++.
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln----~~~~~~~~~i~~D~~------~~l~~  197 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLA----GLEQAPIRWICEDAM------KFIQR  197 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHH----TCTTSCEEEECSCHH------HHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhh----cccCCcEEEEeCCHH------HhHHH
Confidence            4778886665544 333    34568999999988754444333332221    112345778887763      45565


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCC
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVE  186 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~  186 (272)
                      ......+.|+||...-.+.....-.....++   .+       ..+.+.+..+++.+|.+++.++..
T Consensus       198 ~~~~~~~fD~IilDPP~f~~~~~~~~~~~~~---~~-------~~l~~~~~~ll~~~g~~ll~t~~s  254 (309)
T d2igta1         198 EERRGSTYDIILTDPPKFGRGTHGEVWQLFD---HL-------PLMLDICREILSPKALGLVLTAYS  254 (309)
T ss_dssp             HHHHTCCBSEEEECCCSEEECTTCCEEEHHH---HH-------HHHHHHHHHTBCTTCCEEEEEECC
T ss_pred             HhhcCCCCCEEEECCCcccccccchhHHHHH---HH-------HHHHHHHHHhcCCCCCEEEEecCC
Confidence            5555568999999876543222111111211   11       235556667777777766655543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.05  E-value=0.005  Score=41.97  Aligned_cols=46  Identities=15%  Similarity=0.233  Sum_probs=37.6

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           31 SHDYKPSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        31 ~~~~~~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .+.|+...+++||+|+|.|++.. |..+|..|++.+.++++..|+..
T Consensus        21 s~~y~~~~~f~gK~VlVVG~g~S-a~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          21 SSLFREPELFVGESVLVVGGASS-ANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGCCCGGGGTTCCEEEECSSHH-HHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CCcCcchhhcCCCeEEEECCCCC-HHHHHHHHHHhcCEEEEEEecCc
Confidence            44567778899999999998854 89999999998888887777643

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.97  E-value=0.36  Score=34.02  Aligned_cols=115  Identities=17%  Similarity=0.119  Sum_probs=65.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEe-ccCCChHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAIS-ADLGFDENCKRVVDEV  120 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~  120 (272)
                      ++.|+|+ |.+|..+|..|+.+|.  ++++++++.+.   .+...-++.+............. -|.   +         
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~---~~g~alDl~~~~~~~~~~~~i~~~~d~---~---------   65 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL---AVGEAMDLAHAAAGIDKYPKIVGGADY---S---------   65 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH---HHHHHHHHHHHHHTTTCCCEEEEESCG---G---------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccch---hhHHHHHHhhhccccCCCCccccCCCH---H---------
Confidence            6788896 9999999999998885  59999987433   33333334332221222233332 222   1         


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                        ....-|++|..||.....    ..+.   .+.+..|..-...+.+.+..+ ..++.++.++-
T Consensus        66 --~~~~adiVvitag~~~~~----g~~r---~~l~~~n~~i~~~i~~~i~~~-~p~aivivvtN  119 (142)
T d1ojua1          66 --LLKGSEIIVVTAGLARKP----GMTR---LDLAHKNAGIIKDIAKKIVEN-APESKILVVTN  119 (142)
T ss_dssp             --GGTTCSEEEECCCCCCCS----SCCH---HHHHHHHHHHHHHHHHHHHTT-STTCEEEECSS
T ss_pred             --HhccccEEEEeccccCCC----CCch---HHHHHHhhHHHHHHHHHHHhh-CCCcEEEEecC
Confidence              123689999999974322    2222   334555665555555555443 22455665554

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.90  E-value=0.21  Score=39.04  Aligned_cols=124  Identities=18%  Similarity=0.158  Sum_probs=75.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ...|++||=.|.++|+   ++..+++.|++|+.++.++...+..++.+..       .+.+..++..|+.      ..+ 
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~-------n~~~~~~~~~d~~------~~~-  180 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKR-------NGVRPRFLEGSLE------AAL-  180 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHH-------TTCCCEEEESCHH------HHG-
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHH-------cCCceeEEecccc------ccc-
Confidence            4678999999988885   3345678899999999986654444433221       3455667776642      111 


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHH
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLA  198 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la  198 (272)
                          ..+..|+|+.|...            ..           ...+.+.+...|+++|++++.+=     .......+.
T Consensus       181 ----~~~~fD~V~ani~~------------~~-----------l~~l~~~~~~~LkpGG~lilSgi-----l~~~~~~v~  228 (254)
T d2nxca1         181 ----PFGPFDLLVANLYA------------EL-----------HAALAPRYREALVPGGRALLTGI-----LKDRAPLVR  228 (254)
T ss_dssp             ----GGCCEEEEEEECCH------------HH-----------HHHHHHHHHHHEEEEEEEEEEEE-----EGGGHHHHH
T ss_pred             ----cccccchhhhcccc------------cc-----------HHHHHHHHHHhcCCCcEEEEEec-----chhhHHHHH
Confidence                23689999876321            11           12234556677788888876321     112345566


Q ss_pred             HHHhhCCeEEEEE
Q 039897          199 LQLVERGIRVNGV  211 (272)
Q Consensus       199 ~e~~~~gi~vn~i  211 (272)
                      ..+.+.|.++...
T Consensus       229 ~~~~~~Gf~~~~~  241 (254)
T d2nxca1         229 EAMAGAGFRPLEE  241 (254)
T ss_dssp             HHHHHTTCEEEEE
T ss_pred             HHHHHCCCEEEEE
Confidence            6666777766543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.82  E-value=0.012  Score=41.37  Aligned_cols=70  Identities=10%  Similarity=0.005  Sum_probs=46.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      |+++|.| .|.+|+.+++.|.  |..++++..++...+.+       .      ..++.++..|.++++.++++-     
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~-------~------~~~~~~i~Gd~~~~~~L~~a~-----   59 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKV-------L------RSGANFVHGDPTRVSDLEKAN-----   59 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHH-------H------HTTCEEEESCTTSHHHHHHTT-----
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHH-------H------hcCccccccccCCHHHHHHhh-----
Confidence            5688887 4788999999984  66788887764432221       1      224678899999977655431     


Q ss_pred             hcCCccEEEEcc
Q 039897          123 AYGKIDILVNNA  134 (272)
Q Consensus       123 ~~g~ld~vI~~a  134 (272)
                       ...-+.+|.+.
T Consensus        60 -i~~A~~vi~~~   70 (129)
T d2fy8a1          60 -VRGARAVIVNL   70 (129)
T ss_dssp             -CTTCSEEEECC
T ss_pred             -hhcCcEEEEec
Confidence             23566666543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.75  E-value=0.042  Score=42.96  Aligned_cols=36  Identities=22%  Similarity=0.383  Sum_probs=31.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVK   75 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~   75 (272)
                      +|++++|+|.| .||+|..++..|+..|. ++.++|.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            58999999999 77899999999999998 68887743

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.59  E-value=0.023  Score=41.54  Aligned_cols=34  Identities=12%  Similarity=0.053  Sum_probs=28.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      +|-|. |.|-+|.++|++|+++|++|.+.+|+...
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~   36 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSA   36 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhh
Confidence            46666 56889999999999999999999987544

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.52  E-value=0.23  Score=37.23  Aligned_cols=103  Identities=12%  Similarity=0.003  Sum_probs=65.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +.+||=.|++.|.   ++..|++.|++|+.++.+....+..++..   ..    ....+.++..|..+..          
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~---~~----~~~~~~~~~~d~~~l~----------   97 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYA---KS----RESNVEFIVGDARKLS----------   97 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHH---HH----TTCCCEEEECCTTSCC----------
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhh---cc----cccccccccccccccc----------
Confidence            4578999988875   66788899999999998744433333222   22    3456777888876532          


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT  182 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v  182 (272)
                      ...+..|+|+.+..+..       ++..++.           .+++.+...|+.+|++++.
T Consensus        98 ~~~~~fD~I~~~~~l~~-------~~~~d~~-----------~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1          98 FEDKTFDYVIFIDSIVH-------FEPLELN-----------QVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             SCTTCEEEEEEESCGGG-------CCHHHHH-----------HHHHHHHHHEEEEEEEEEE
T ss_pred             ccCcCceEEEEecchhh-------CChhHHH-----------HHHHHHHHHcCcCcEEEEE
Confidence            11247899888765522       2223322           2355666778888987654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.37  E-value=0.072  Score=39.54  Aligned_cols=41  Identities=24%  Similarity=0.183  Sum_probs=34.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      ....+.|+|+|+||+-. |.+.|..|+++|++|.+..+.+.-
T Consensus        38 ~~~~~~k~V~IIGaGPA-GL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          38 LPAVQKKNLAVVGAGPA-GLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             CSCSSCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCCCCcEEEEECccHH-HHHHHHHHHhhccceEEEeccCcc
Confidence            45567899999997655 999999999999999999887543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.14  E-value=0.02  Score=45.25  Aligned_cols=34  Identities=24%  Similarity=0.236  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      +|+|+|+||+-. |...|.+|+++|++|.++.+++
T Consensus         1 ~KkV~IIGaG~a-GL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVS-GLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHH-HHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcCHH-HHHHHHHHHhCCCCEEEEeCCC
Confidence            588999988765 8999999999999999997653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.98  E-value=0.039  Score=40.32  Aligned_cols=99  Identities=18%  Similarity=0.233  Sum_probs=64.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..|.||+++|.| .|.||+.+|+.|...|++|+++..++-  ..++...         .+..+.          .+++++
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~--~al~A~~---------dG~~v~----------~~~~a~   77 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPI--NALQAAM---------EGYEVT----------TMDEAC   77 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH--HHHHHHH---------TTCEEC----------CHHHHT
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccc--hhHHhhc---------CceEee----------ehhhhh
Confidence            358999999998 458999999999999999999988742  2233222         121111          122222


Q ss_pred             HHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccC
Q 039897          118 DEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWH  190 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~  190 (272)
                             ..-|++|.+.|...      -++.++                   ++.||++.-+.++++......
T Consensus        78 -------~~adivvtaTGn~~------vI~~eh-------------------~~~MKdgaIL~N~Ghfd~EId  118 (163)
T d1li4a1          78 -------QEGNIFVTTTGCID------IILGRH-------------------FEQMKDDAIVCNIGHFDVEID  118 (163)
T ss_dssp             -------TTCSEEEECSSCSC------SBCHHH-------------------HTTCCTTEEEEECSSSTTSBC
T ss_pred             -------hhccEEEecCCCcc------chhHHH-------------------HHhccCCeEEEEeccccceec
Confidence                   35789999888632      133333                   356777777777777665555

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.84  E-value=0.11  Score=38.39  Aligned_cols=31  Identities=16%  Similarity=0.224  Sum_probs=27.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      +|.|.|+ |..|.++|..|++.|.+|.+.+|.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~   32 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTE   32 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEec
Confidence            5778876 778999999999999999999885

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.75  E-value=0.16  Score=40.23  Aligned_cols=80  Identities=21%  Similarity=0.168  Sum_probs=47.2

Q ss_pred             CcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           42 GKVALVTGGDSG-IGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        42 ~k~vlVtGas~g-IG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .++++-.|+++| |+.+++ +  ...++|+.++.++...+..++-+...     ....++.++..|+.+.         +
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~-----~~~~~~~i~~~~~~~~---------~  173 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERH-----GVSDRFFVRKGEFLEP---------F  173 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHT-----TCTTSEEEEESSTTGG---------G
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHc-----CCCceeEEeecccccc---------c
Confidence            345665665555 555544 2  35779999999855444433333221     1233556667777543         2


Q ss_pred             HHhcCCccEEEEcccccC
Q 039897          121 VNAYGKIDILVNNAAVQY  138 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~  138 (272)
                      ....+++|++|.|..+..
T Consensus       174 ~~~~~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         174 KEKFASIEMILSNPPYVK  191 (271)
T ss_dssp             GGGTTTCCEEEECCCCBC
T ss_pred             ccccCcccEEEEcccccC
Confidence            223478999999998753

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=93.54  E-value=0.21  Score=37.82  Aligned_cols=102  Identities=13%  Similarity=0.046  Sum_probs=65.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +++||=.|++.|.-   +..|+++|++|+.++.++...+..++.+...      ...++.++..|..+..    +     
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~------~~~~i~~~~~d~~~l~----~-----   77 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN------GHQQVEYVQGDAEQMP----F-----   77 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCC-CCC----S-----
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc------cccccccccccccccc----c-----
Confidence            57999999887743   4567888999999988754433333322221      3456888888887642    0     


Q ss_pred             HhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe
Q 039897          122 NAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT  182 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v  182 (272)
                       ..+..|+|+.+..+..-    .  +.              ..+++.+...|+.+|++++.
T Consensus        78 -~~~~fD~v~~~~~l~~~----~--d~--------------~~~l~~~~r~LkpgG~l~i~  117 (231)
T d1vl5a_          78 -TDERFHIVTCRIAAHHF----P--NP--------------ASFVSEAYRVLKKGGQLLLV  117 (231)
T ss_dssp             -CTTCEEEEEEESCGGGC----S--CH--------------HHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccccccccccccccc----C--CH--------------HHHHHHHHHhcCCCcEEEEE
Confidence             12579999888766321    1  12              23455667778888988764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.46  E-value=0.28  Score=35.76  Aligned_cols=37  Identities=22%  Similarity=0.126  Sum_probs=29.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhH
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDA   82 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~   82 (272)
                      |-|+ |.|-+|.+++++|++.|++|.+.+|+++..+.+
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l   40 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEF   40 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            4444 578899999999999999999999885544433

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.36  E-value=0.21  Score=38.08  Aligned_cols=80  Identities=19%  Similarity=0.104  Sum_probs=54.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.+||.+|+++|--.++.-+|.  |.+|+.+.+++.-.+...+.+   .+.   .-.++.++..|..+-         
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l---~~~---g~~nv~~~~gd~~~g---------  139 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNL---ERA---GVKNVHVILGDGSKG---------  139 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHH---HHT---TCCSEEEEESCGGGC---------
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHH---HHc---CCceeEEEECccccC---------
Confidence            458899999999998888877776  567988888743333333322   221   346788889887531         


Q ss_pred             HHHhcCCccEEEEccccc
Q 039897          120 VVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~  137 (272)
                       ....+..|.++.+++..
T Consensus       140 -~~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         140 -FPPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             -CGGGCCEEEEEECSBBS
T ss_pred             -CcccCcceeEEeecccc
Confidence             12236799999888774

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.31  E-value=0.079  Score=38.57  Aligned_cols=91  Identities=10%  Similarity=0.080  Sum_probs=51.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecccchhhhHHHHHHHHHH----hhhcCCCCceEEeccCCChHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKSQEEKDAQETLEILRE----AKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      |+|+|.| .|-||..+|+.|.+.|+  +|++.+++++..+.+++.-. +..    ...........+-+ .+-++.+.+.
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~v   78 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI-IDEGTTSIAKVEDFSPDFVML-SSPVRTFREI   78 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS-CSEEESCGGGGGGTCCSEEEE-CSCHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhc-chhhhhhhhhhhccccccccc-cCCchhhhhh
Confidence            3688887 59999999999999996  67777777444333222100 000    00000011112211 2235678888


Q ss_pred             HHHHHHhcCCccEEEEcccc
Q 039897          117 VDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~  136 (272)
                      ++++......=.+++...+.
T Consensus        79 l~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhccccccccccccccc
Confidence            88887766554566665554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.28  E-value=0.049  Score=42.57  Aligned_cols=36  Identities=25%  Similarity=0.272  Sum_probs=32.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYV   74 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r   74 (272)
                      .+|+||+|+|-| .|.+|..+|+.|.+.|++|+.++-
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            469999999997 889999999999999999987653

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.27  E-value=0.5  Score=31.91  Aligned_cols=82  Identities=17%  Similarity=0.163  Sum_probs=54.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ||+|||.--..-+-..+...|.+.|++|+....+   .....   +.+.+    ....+..+..++-+.+. -+++++++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~---~~~al---~~~~~----~~~dliilD~~mp~~~G-~e~~~~ir   69 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATN---GREAV---EKYKE----LKPDIVTMDITMPEMNG-IDAIKEIM   69 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESS---HHHHH---HHHHH----HCCSEEEEECSCGGGCH-HHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECC---HHHHH---HHHHh----ccCCEEEEecCCCCCCH-HHHHHHHH
Confidence            7899999999999999999999999998765443   22222   22222    23445545444444443 45778887


Q ss_pred             HhcCCccEEEEcc
Q 039897          122 NAYGKIDILVNNA  134 (272)
Q Consensus       122 ~~~g~ld~vI~~a  134 (272)
                      +....+-+++..+
T Consensus        70 ~~~~~~pvi~ls~   82 (118)
T d1u0sy_          70 KIDPNAKIIVCSA   82 (118)
T ss_dssp             HHCTTCCEEEEEC
T ss_pred             HhCCCCcEEEEEc
Confidence            7777777776654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.26  E-value=0.35  Score=35.57  Aligned_cols=101  Identities=18%  Similarity=0.103  Sum_probs=62.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|.+||=.|++.|   .++..|++.+.+|+.++.++...+..++.+...   +  ...++.++..|..      +.    
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~---g--l~~~v~~~~gda~------~~----   94 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH---G--LGDNVTLMEGDAP------EA----   94 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT---T--CCTTEEEEESCHH------HH----
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHc---C--CCcceEEEECchh------hc----
Confidence            5788998887766   233456667889999999855544444433321   1  3457888888742      11    


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT  182 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v  182 (272)
                      ......+|.++.+.+..         ..              ..+.+.+...++++|+++..
T Consensus        95 ~~~~~~~D~v~~~~~~~---------~~--------------~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_          95 LCKIPDIDIAVVGGSGG---------EL--------------QEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             HTTSCCEEEEEESCCTT---------CH--------------HHHHHHHHHTEEEEEEEEEE
T ss_pred             ccccCCcCEEEEeCccc---------cc--------------hHHHHHHHHHhCcCCEEEEE
Confidence            12345789988764331         01              12456677788888887754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=93.25  E-value=0.052  Score=42.77  Aligned_cols=35  Identities=23%  Similarity=0.210  Sum_probs=31.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTY   73 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~   73 (272)
                      .+++||+++|.| .|.+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468999999999 78999999999999999998774

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.22  E-value=0.11  Score=39.22  Aligned_cols=73  Identities=22%  Similarity=0.247  Sum_probs=50.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..++.||+||=.|+++|+   ++..++..|+ +|+.++.++...+..    .+       ...++.++..|+.+.     
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~a----r~-------N~~~~~~~~~D~~~l-----  104 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETA----KR-------NCGGVNFMVADVSEI-----  104 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHH----HH-------HCTTSEEEECCGGGC-----
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHH----HH-------ccccccEEEEehhhc-----
Confidence            378999999999988773   2334666776 599998874322221    11       234678888988532     


Q ss_pred             HHHHHHHhcCCccEEEEcccc
Q 039897          116 VVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~  136 (272)
                              .+++|+||.|..+
T Consensus       105 --------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 --------SGKYDTWIMNPPF  117 (197)
T ss_dssp             --------CCCEEEEEECCCC
T ss_pred             --------CCcceEEEeCccc
Confidence                    2689999999876

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.04  E-value=0.074  Score=38.13  Aligned_cols=35  Identities=17%  Similarity=0.232  Sum_probs=28.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEecccchh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG-ATVAFTYVKSQEE   79 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G-~~v~i~~r~~~~~   79 (272)
                      ++.+.|+ |-+|.++++.|.+.| ++|++.+|+++..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~   37 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKR   37 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHH
Confidence            4677766 999999999999888 8999998885443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.02  E-value=0.15  Score=35.86  Aligned_cols=77  Identities=12%  Similarity=0.161  Sum_probs=50.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      +|.|.|++|.+|+++++...+. ++.++...-......       .+.      ..++. +-.|++.++.+.+.++...+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~-------~~~------~~~~D-vvIDFS~p~~~~~~~~~~~~   66 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLS-------LLT------DGNTE-VVIDFTHPDVVMGNLEFLID   66 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTH-------HHH------TTTCS-EEEECCCTTTHHHHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchh-------hhc------cccCC-EEEEcccHHHHHHHHHHHHh
Confidence            5899999999999999987665 555544322111111       111      11222 56799999999999988776


Q ss_pred             hcCCccEEEEcccc
Q 039897          123 AYGKIDILVNNAAV  136 (272)
Q Consensus       123 ~~g~ld~vI~~ag~  136 (272)
                      .  ++.+||-..|+
T Consensus        67 ~--~~~~ViGTTG~   78 (135)
T d1yl7a1          67 N--GIHAVVGTTGF   78 (135)
T ss_dssp             T--TCEEEECCCCC
T ss_pred             c--CCCEEEecccc
Confidence            4  56667655555

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.07  Score=36.97  Aligned_cols=33  Identities=12%  Similarity=0.163  Sum_probs=29.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      |+++|.||+ -||.++|..|.+.|.+|.++.|..
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            788888875 599999999999999999998864

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.78  E-value=0.086  Score=42.22  Aligned_cols=36  Identities=17%  Similarity=0.067  Sum_probs=32.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q 039897           37 SNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTY   73 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~   73 (272)
                      ..+|+||+|+|.|- |.+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            35799999999986 7999999999999999998875

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.57  E-value=0.49  Score=35.39  Aligned_cols=77  Identities=21%  Similarity=0.189  Sum_probs=51.4

Q ss_pred             CCCCCCcEEEEEcCCCc-hHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHH
Q 039897           37 SNKLRGKVALVTGGDSG-IGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCK  114 (272)
Q Consensus        37 ~~~l~~k~vlVtGas~g-IG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (272)
                      ..+++|++||=.|++.| +|.    .++.+|+ +|+.++.++...+.+.+.   +.    ..+.+..++..|+...    
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N---~~----~~~~~~~~~~~d~~~~----  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIEN---LG----EFKGKFKVFIGDVSEF----  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHH---TG----GGTTSEEEEESCGGGC----
T ss_pred             cCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHH---HH----HcCCCceEEECchhhh----
Confidence            57799999999997766 433    3456786 799998874433333222   11    1455677788886432    


Q ss_pred             HHHHHHHHhcCCccEEEEccccc
Q 039897          115 RVVDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       115 ~~~~~~~~~~g~ld~vI~~ag~~  137 (272)
                               .+++|+||.|..+.
T Consensus       107 ---------~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ---------NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ---------CCCCSEEEECCCCS
T ss_pred             ---------CCcCcEEEEcCccc
Confidence                     35799999999764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.51  E-value=0.11  Score=35.70  Aligned_cols=35  Identities=20%  Similarity=0.265  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      +|+++|.| +|-+|.++|..|+++|.+|.++.+.+.
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            57887777 578999999999999999999988753

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=92.41  E-value=0.11  Score=40.70  Aligned_cols=120  Identities=16%  Similarity=0.107  Sum_probs=73.4

Q ss_pred             CCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDSG-IGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~g-IG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      -.|.+||=.|+++| +...+++.+.. +.+|+.+++++...+..++.+   .+..  ...++.+...|+.+.      +.
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~---~~~~--~~~nv~~~~~Di~~~------~~  151 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNL---SEFY--DIGNVRTSRSDIADF------IS  151 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHH---HTTS--CCTTEEEECSCTTTC------CC
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHH---HHhc--CCCceEEEEeeeecc------cc
Confidence            34899999997655 56666666543 448999998754444333333   2211  345788888888652      11


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecCCCCccCChhHHHHH
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTSVEPLWHSPEARGLA  198 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~la  198 (272)
                           .+.+|.|+.+..-                         ++.++..+...|+++|++++.+..     ..+...+.
T Consensus       152 -----~~~fD~V~ld~p~-------------------------p~~~l~~~~~~LKpGG~lv~~~P~-----i~Qv~~~~  196 (250)
T d1yb2a1         152 -----DQMYDAVIADIPD-------------------------PWNHVQKIASMMKPGSVATFYLPN-----FDQSEKTV  196 (250)
T ss_dssp             -----SCCEEEEEECCSC-------------------------GGGSHHHHHHTEEEEEEEEEEESS-----HHHHHHHH
T ss_pred             -----cceeeeeeecCCc-------------------------hHHHHHHHHHhcCCCceEEEEeCC-----cChHHHHH
Confidence                 1468988864321                         123456677888999988764331     13356666


Q ss_pred             HHHhhCCe
Q 039897          199 LQLVERGI  206 (272)
Q Consensus       199 ~e~~~~gi  206 (272)
                      ..+.+.|.
T Consensus       197 ~~l~~~gf  204 (250)
T d1yb2a1         197 LSLSASGM  204 (250)
T ss_dssp             HHSGGGTE
T ss_pred             HHHHHCCC
Confidence            66766664

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.37  E-value=0.12  Score=39.69  Aligned_cols=39  Identities=21%  Similarity=0.269  Sum_probs=33.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      ..-++|+|+|+||+-. |...|..|+++|++|.++.+..+
T Consensus        45 ~~~~~k~VvIIGaGpA-Gl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          45 QTKNKDSVLIVGAGPS-GSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CCSSCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cccCCceEEEEcccHH-HHHHHHHHHHhccceeeEeeccc
Confidence            3457899999998765 99999999999999999987653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.35  E-value=0.12  Score=35.55  Aligned_cols=35  Identities=23%  Similarity=0.282  Sum_probs=30.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+|+++|.| +|-+|.++|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            467888885 56899999999999999999998864

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.32  E-value=0.45  Score=35.17  Aligned_cols=107  Identities=16%  Similarity=0.150  Sum_probs=65.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      ...+++||=.|++.|   .++..+++.+.+|++++.++...+..++.+...    .....++.++..|+.+.-      .
T Consensus        50 ~~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~----~l~~~~i~~~~~d~~~~~------~  116 (194)
T d1dusa_          50 VDKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLN----NLDNYDIRVVHSDLYENV------K  116 (194)
T ss_dssp             CCTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT----TCTTSCEEEEECSTTTTC------T
T ss_pred             cCCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHh----CCccceEEEEEcchhhhh------c
Confidence            346889999997766   334456678889999998754443333322211    113446788888876421      1


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT  182 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v  182 (272)
                           .+..|+++.|..+..        ..+..           ..+++.+...|+++|.++++
T Consensus       117 -----~~~fD~Ii~~~p~~~--------~~~~~-----------~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         117 -----DRKYNKIITNPPIRA--------GKEVL-----------HRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             -----TSCEEEEEECCCSTT--------CHHHH-----------HHHHHHHHHHEEEEEEEEEE
T ss_pred             -----cCCceEEEEcccEEe--------cchhh-----------hhHHHHHHHhcCcCcEEEEE
Confidence                 147999998865421        11111           22456667778888887654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.31  E-value=0.088  Score=40.41  Aligned_cols=34  Identities=26%  Similarity=0.195  Sum_probs=28.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .|+|+|+||+ -.|..+|.+|+++|++|.++.++.
T Consensus         6 ~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGSG-VIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578888865 459999999999999999998853

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=92.30  E-value=0.52  Score=36.93  Aligned_cols=105  Identities=13%  Similarity=0.072  Sum_probs=65.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALE-GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .+.+||=.|++.|.   ++..|+++ |++|+.++.++...+...+.....     ....++.++.+|..+..     +  
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~-----gl~~~v~~~~~d~~~l~-----~--  131 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA-----GLADNITVKYGSFLEIP-----C--  131 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH-----TCTTTEEEEECCTTSCS-----S--
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccc-----ccccccccccccccccc-----c--
Confidence            57899999977662   44455554 889999988754433333333221     13457889999987632     0  


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEec
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT  183 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vs  183 (272)
                         ..+.+|+|+.+-.+..-    .  +.              ..+++.+...|+.+|++++..
T Consensus       132 ---~~~sfD~V~~~~~l~h~----~--d~--------------~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         132 ---EDNSYDFIWSQDAFLHS----P--DK--------------LKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             ---CTTCEEEEEEESCGGGC----S--CH--------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred             ---cccccchhhccchhhhc----c--CH--------------HHHHHHHHHhcCCCcEEEEEE
Confidence               12579999876655321    1  11              234566778889999877654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.18  E-value=0.17  Score=36.07  Aligned_cols=37  Identities=16%  Similarity=0.094  Sum_probs=30.2

Q ss_pred             CCCcEEEEE-cCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVT-GGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVt-Gas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..++.++|. .+++-||.++|..|+++|.+|.++.+..
T Consensus        37 ~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          37 KIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            445566655 4678999999999999999999998864

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.16  E-value=0.45  Score=32.84  Aligned_cols=79  Identities=16%  Similarity=0.120  Sum_probs=51.4

Q ss_pred             CCCcEEEEEcCCC-ch---------HHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCC
Q 039897           40 LRGKVALVTGGDS-GI---------GRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGF  109 (272)
Q Consensus        40 l~~k~vlVtGas~-gI---------G~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (272)
                      -..|+|||.|++. .|         +...++.|.+.|++++++.-+++.-..              ...-..-+.++--+
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVst--------------d~d~aD~lYfePlt   70 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMT--------------DPEMADATYIEPIH   70 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGG--------------CGGGSSEEECSCCC
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhc--------------ChhhcceeeeecCC
Confidence            3458999999863 33         456778899999999999887654211              11112233444445


Q ss_pred             hHHHHHHHHHHHHhcCCccEEEEccccc
Q 039897          110 DENCKRVVDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      .+.+.+.++.     .++|.++-..|..
T Consensus        71 ~e~v~~Ii~~-----E~pd~il~~~GGQ   93 (127)
T d1a9xa3          71 WEVVRKIIEK-----ERPDAVLPTMGGQ   93 (127)
T ss_dssp             HHHHHHHHHH-----HCCSEEECSSSHH
T ss_pred             HHHHHHHHHH-----hCcCCeEEEeeee
Confidence            5666666654     3799998888764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.87  E-value=0.079  Score=42.21  Aligned_cols=35  Identities=20%  Similarity=0.205  Sum_probs=29.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      +.|+|+|+||+-. |...|.+|+++|++|.++.++.
T Consensus        29 ~pkkV~IIGaG~a-GLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAGMA-GLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCBHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEeCCC
Confidence            3468999998765 9999999999999999997753

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.72  E-value=0.072  Score=39.34  Aligned_cols=36  Identities=11%  Similarity=0.018  Sum_probs=29.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGAT-VAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~-v~i~~r~~~   77 (272)
                      .+|+|+|+||+ -.|...|..|+++|++ |.++.+...
T Consensus         3 ~~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAG-PASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            36889999865 4599999999999995 888887654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.70  E-value=0.12  Score=37.52  Aligned_cols=37  Identities=24%  Similarity=0.401  Sum_probs=33.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+.||+++|.| -|-+|+.+|++|...|++|+++..++
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DP   56 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDP   56 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCc
Confidence            48899999998 67799999999999999999998874

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.64  E-value=0.15  Score=34.65  Aligned_cols=34  Identities=29%  Similarity=0.321  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .|.++|.|| |-+|.++|..|.+.|.+|.++.+.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            367888875 6789999999999999999998863

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.33  E-value=0.11  Score=40.14  Aligned_cols=34  Identities=21%  Similarity=0.149  Sum_probs=29.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .++|+|+||+-. |..+|..|+++|++|+++.++.
T Consensus         4 ~~kV~IiGaG~a-Gl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGSIS-GLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECcCHH-HHHHHHHHHHCCCCEEEEeCCC
Confidence            458999998765 8999999999999999998753

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=91.26  E-value=0.12  Score=39.22  Aligned_cols=45  Identities=18%  Similarity=0.164  Sum_probs=36.5

Q ss_pred             CCCCC-CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           31 SHDYK-PSNKLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        31 ~~~~~-~~~~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ...++ ...+++||+|+|.|++.. |..+|..+++.+++++.+.|..
T Consensus        20 S~~~~~~~~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          20 TGNWPHEPVDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             GGGCCSSCCCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSC
T ss_pred             cCcCCCCCCCCCCCEEEEECCCcc-HHHHHHHHHhhhcccccccccc
Confidence            44553 456799999999997765 9999999999999988887753

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.99  E-value=0.24  Score=35.20  Aligned_cols=33  Identities=12%  Similarity=0.037  Sum_probs=24.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC----CeEEEEecc
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEG----ATVAFTYVK   75 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G----~~v~i~~r~   75 (272)
                      |+|.|.||||-+|+.+.+.|+++.    .+++....+
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss   38 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecc
Confidence            368899999999999999887763    245555544

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.89  E-value=0.18  Score=34.23  Aligned_cols=33  Identities=18%  Similarity=0.100  Sum_probs=28.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      |+++|.| +|-+|.++|..|.+.|.+|.++.+.+
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            5677776 57889999999999999999998864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.76  E-value=0.11  Score=41.90  Aligned_cols=36  Identities=19%  Similarity=0.310  Sum_probs=30.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      ++|+|+|+||+=. |..+|..|++.|++|.++..+..
T Consensus         1 k~KKI~IIGaG~s-GL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGAGFS-GAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHhCCCCEEEEECCCC
Confidence            4689999997654 89999999999999999987654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.71  E-value=0.77  Score=31.25  Aligned_cols=78  Identities=13%  Similarity=0.053  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCCC-ch---------HHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh
Q 039897           41 RGKVALVTGGDS-GI---------GRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD  110 (272)
Q Consensus        41 ~~k~vlVtGas~-gI---------G~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (272)
                      ..|+|||.|++. .|         +...++.|.+.|++++++.-|++.-..              ...-..-+.++--..
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst--------------d~d~aD~lYfeplt~   68 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST--------------DYDTSDRLYFEPVTL   68 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT--------------STTSSSEEECCCCSH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc--------------ChhhcCceEEccCCH
Confidence            357899999864 33         456778899999999999887654211              111222333434445


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccccc
Q 039897          111 ENCKRVVDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       111 ~~~~~~~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +.+.+.++.     .++|.+|...|..
T Consensus        69 e~v~~Ii~~-----E~p~~ii~~~GGQ   90 (121)
T d1a9xa4          69 EDVLEIVRI-----EKPKGVIVQYGGQ   90 (121)
T ss_dssp             HHHHHHHHH-----HCCSEEECSSSTH
T ss_pred             HHHHHHHHH-----hCCCEEEeehhhh
Confidence            556555543     3789998887764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.70  E-value=0.34  Score=38.81  Aligned_cols=77  Identities=19%  Similarity=0.205  Sum_probs=50.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      .++||+||-.|++.|+   ++..+++.|+ +|+.++.++.    .........+  .....++.++..|+.+...     
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~----~~~a~~~~~~--~~~~~~i~~~~~~~~~l~~-----   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI----LYQAMDIIRL--NKLEDTITLIKGKIEEVHL-----   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH----HHHHHHHHHH--TTCTTTEEEEESCTTTSCC-----
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH----HHHHHHHHHH--hCCCccceEEEeeHHHhcC-----
Confidence            4689999999988875   5667888897 6888877632    1222222222  1245678888888876431     


Q ss_pred             HHHHHhcCCccEEEEcc
Q 039897          118 DEVVNAYGKIDILVNNA  134 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~a  134 (272)
                           ...++|+||...
T Consensus        99 -----~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -----PVEKVDVIISEW  110 (311)
T ss_dssp             -----SCSCEEEEEECC
T ss_pred             -----ccccceEEEEee
Confidence                 124789998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.67  E-value=0.24  Score=33.57  Aligned_cols=36  Identities=14%  Similarity=0.171  Sum_probs=30.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ..+|.++|.| +|-||.++|..|++.|.+|.++.+.+
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            3478888877 57889999999999999999998864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.67  E-value=0.19  Score=34.48  Aligned_cols=34  Identities=24%  Similarity=0.336  Sum_probs=29.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      -|.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            367888874 6799999999999999999998763

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.59  E-value=0.21  Score=35.60  Aligned_cols=35  Identities=11%  Similarity=0.061  Sum_probs=28.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE   79 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~   79 (272)
                      +|-|. |.|-+|.++++.|.++|++|+..+++++..
T Consensus         2 kIgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~   36 (152)
T d1i36a2           2 RVGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPS   36 (152)
T ss_dssp             EEEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred             EEEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence            35566 459999999999999999999888775544

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.42  E-value=0.23  Score=33.87  Aligned_cols=34  Identities=24%  Similarity=0.163  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+.++|.| +|-||.++|..|++.|.+|.++.+..
T Consensus        22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            47788887 47899999999999999999998764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=90.31  E-value=0.72  Score=34.91  Aligned_cols=103  Identities=11%  Similarity=-0.025  Sum_probs=65.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|.+||=.|++.|.   ++..|++.|++|+.++.+..-.+..++.....      .-.++.++..|..+..    +-   
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~------~~~~~~~~~~d~~~~~----~~---   79 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEK------GVENVRFQQGTAESLP----FP---   79 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH------TCCSEEEEECBTTBCC----SC---
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccc------cccccccccccccccc----cc---
Confidence            36789999988773   44567778999999988754433333332221      2356888888886532    10   


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT  182 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v  182 (272)
                         .+.+|+|+.+-.+....      +.              ..+++.+...|+.+|.+++.
T Consensus        80 ---~~~fD~v~~~~~l~~~~------d~--------------~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          80 ---DDSFDIITCRYAAHHFS------DV--------------RKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             ---TTCEEEEEEESCGGGCS------CH--------------HHHHHHHHHHEEEEEEEEEE
T ss_pred             ---ccccceeeeeceeeccc------CH--------------HHHHHHHHHeeCCCcEEEEE
Confidence               25799887766553211      11              24466677788888887774

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=90.03  E-value=0.11  Score=38.89  Aligned_cols=33  Identities=21%  Similarity=0.242  Sum_probs=28.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ++|.|.|++. .|.++|..|++.|++|.+.+|++
T Consensus         8 ~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~   40 (189)
T d1n1ea2           8 NKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNE   40 (189)
T ss_dssp             EEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCH
T ss_pred             ceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecH
Confidence            4688888655 69999999999999999999873

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.93  E-value=2  Score=29.86  Aligned_cols=89  Identities=10%  Similarity=-0.006  Sum_probs=56.1

Q ss_pred             CCcEEEEEcCC---CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           41 RGKVALVTGGD---SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        41 ~~k~vlVtGas---~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      +-|.|.|.|+|   +..|..+.+.|.+.|++|+.+.-+...- .-.+....+.+    ....+..+.+ +...+.+.+++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i-~G~~~~~sl~d----lp~~iD~v~i-~vp~~~~~~~~   91 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV-LGRKCYPSVLD----IPDKIEVVDL-FVKPKLTMEYV   91 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-TTEECBSSGGG----CSSCCSEEEE-CSCHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc-CCCcccccccc----cCccceEEEE-EeCHHHHHHHH
Confidence            57899999999   5899999999999999998885442110 00000111111    1222333222 34567788888


Q ss_pred             HHHHHhcCCccEEEEccccc
Q 039897          118 DEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +++.+.  ++..++...|..
T Consensus        92 ~e~~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          92 EQAIKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHHHHH--TCSEEEECTTCC
T ss_pred             HHHHHh--CCCEEEEecccc
Confidence            888765  467788777763

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=89.86  E-value=0.2  Score=34.12  Aligned_cols=34  Identities=12%  Similarity=-0.009  Sum_probs=29.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .|+++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            367888774 6789999999999999999998863

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.80  E-value=0.61  Score=35.48  Aligned_cols=86  Identities=16%  Similarity=-0.003  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|.+||-.|.++|.-.++.-++.....+|+.++++++-.+...+.+....... ....++.++..|..+..         
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~-~~~~~~~~~~gD~~~~~---------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTL-LSSGRVQLVVGDGRMGY---------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHH-HHTSSEEEEESCGGGCC---------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCccc-ccccceEEEEeeccccc---------
Confidence            47899999999998888777787777899999987544444333332211000 01345566667764211         


Q ss_pred             HHhcCCccEEEEccccc
Q 039897          121 VNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~  137 (272)
                       ...+..|.++.+++..
T Consensus       146 -~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 -AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             -GGGCCEEEEEECSBBS
T ss_pred             -chhhhhhhhhhhcchh
Confidence             1235789999888763

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.77  E-value=0.93  Score=34.39  Aligned_cols=86  Identities=15%  Similarity=0.098  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-C----CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALE-G----ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~-G----~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      .|.+||.+|+++|--.++.-+++.. |    .+|+.+.++++-.+...+.+...... ...-.++.++..|..+.     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~-~~~~~nv~~~~~d~~~~-----  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS-MLDSGQLLIVEGDGRKG-----  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH-HHHHTSEEEEESCGGGC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchh-hcCccEEEEEecccccc-----
Confidence            4789999999998888877777643 4    48999988754444333333221110 00234677888887531     


Q ss_pred             HHHHHHHhcCCccEEEEccccc
Q 039897          116 VVDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~~  137 (272)
                           ....+..|.++.+++..
T Consensus       154 -----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 -----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             -----CGGGCSEEEEEECSCBS
T ss_pred             -----cccccceeeEEEEeech
Confidence                 11346799999888773

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=89.74  E-value=0.9  Score=32.27  Aligned_cols=46  Identities=13%  Similarity=0.042  Sum_probs=33.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETLEIL   89 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~~~~   89 (272)
                      |++.|.|+||.||......+.+.  .++|+.+.-+ ++.+.+.+.+.++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~-~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-KNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-SCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec-CcHHHHHHHHHHH
Confidence            57999999999999999988887  4677766543 3345555555443

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=89.40  E-value=2.7  Score=30.13  Aligned_cols=81  Identities=9%  Similarity=0.100  Sum_probs=44.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc-----CCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALE-----GATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~-----G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .-++.|.||++.-...++..+...     +.++++.+.+.+..+.....++.....   .+........  +   +..+.
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~---d~~ea   74 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIRE---KAPDIEFAAT--T---DPEEA   74 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHH---HCTTSEEEEE--S---CHHHH
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHH---hCCCcceEec--C---Chhhc
Confidence            346888888654333344444432     237999999866554444444443322   2233332221  1   12233


Q ss_pred             HHHHHHhcCCccEEEEccccc
Q 039897          117 VDEVVNAYGKIDILVNNAAVQ  137 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag~~  137 (272)
                      +       ..-|+||+.+|..
T Consensus        75 l-------~~AD~Vvitag~~   88 (167)
T d1u8xx1          75 F-------TDVDFVMAHIRVG   88 (167)
T ss_dssp             H-------SSCSEEEECCCTT
T ss_pred             c-------CCCCEEEECCCcC
Confidence            3       3799999999984

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=89.29  E-value=0.29  Score=37.82  Aligned_cols=109  Identities=19%  Similarity=0.177  Sum_probs=64.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|++||=.|.+.|   ..+..+++.|. +|+.++.++...+.+.+..   .+  .....++.++..|+....-       
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~---~~--~~~~~~v~f~~~D~~~~~~-------   88 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRA---RN--MKRRFKVFFRAQDSYGRHM-------   88 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHH---HT--SCCSSEEEEEESCTTTSCC-------
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHH---Hh--cCCCcceEEEEcchhhhcc-------
Confidence            4788999997765   23455677776 6999998854433333222   21  1134467888999854311       


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT  182 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v  182 (272)
                        ...+..|+|+.+.++..-.     .+.+++.           .+.+.+...|+++|.++..
T Consensus        89 --~~~~~fD~V~~~~~l~~~~-----~~~~~~~-----------~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          89 --DLGKEFDVISSQFSFHYAF-----STSESLD-----------IAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             --CCSSCEEEEEEESCGGGGG-----SSHHHHH-----------HHHHHHHHTEEEEEEEEEE
T ss_pred             --cccccceEEEEcceeeecC-----CCHHHHH-----------HHHHHHhceeCCCCEEEEE
Confidence              0124689988876653211     1233333           3445666778888887764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.13  E-value=0.2  Score=35.74  Aligned_cols=33  Identities=6%  Similarity=0.007  Sum_probs=27.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      +.|. |.|-+|.++++.|.+.|+++++.+|+.+.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~   35 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLER   35 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHh
Confidence            4555 67889999999999999999999887443

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=89.07  E-value=1.2  Score=29.83  Aligned_cols=81  Identities=14%  Similarity=0.182  Sum_probs=53.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      ||+|||.--...+-..+.+.|.+.|++|..+..    .+...   +.+.+    ....+......+-+.+.+ +++++++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~----g~eal---~~~~~----~~~dlillD~~mP~~~G~-el~~~lr   68 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAAN----GLQAL---DIVTK----ERPDLVLLDMKIPGMDGI-EILKRMK   68 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS----HHHHH---HHHHH----HCCSEEEEESCCTTCCHH-HHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCC----HHHHH---HHHHh----CCCCEEEEeccCCCCCHH-HHHHHHH
Confidence            689999999999999999999999999886533    22222   22222    234444444444454444 5777888


Q ss_pred             HhcCCccEEEEcc
Q 039897          122 NAYGKIDILVNNA  134 (272)
Q Consensus       122 ~~~g~ld~vI~~a  134 (272)
                      +....+-+++..+
T Consensus        69 ~~~~~~pvi~lt~   81 (119)
T d1peya_          69 VIDENIRVIIMTA   81 (119)
T ss_dssp             HHCTTCEEEEEES
T ss_pred             HhCCCCcEEEEec
Confidence            7766677766654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.95  E-value=0.24  Score=37.06  Aligned_cols=32  Identities=25%  Similarity=0.241  Sum_probs=27.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      +|.|. |.|-+|..+|..|++.|++|++.+.+.
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~   33 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSS   33 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCH
Confidence            36666 688999999999999999999999873

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.65  E-value=0.18  Score=37.87  Aligned_cols=31  Identities=13%  Similarity=0.138  Sum_probs=26.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      |+|+||+ --|..+|..|+++|.+|.++.++.
T Consensus         8 viViGaG-~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTG-ITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCCEEEEcCCC
Confidence            7888854 449999999999999999998864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=88.58  E-value=0.29  Score=35.68  Aligned_cols=114  Identities=12%  Similarity=-0.055  Sum_probs=65.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHH------hhhcCCCCceEEeccCCChHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILRE------AKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ..|++||..|.+.|   ..+..|+++|++|+.++.+....+..++.......      ..........++..|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            46889999998877   36678999999999999985544443332211000      0000134456777777654321


Q ss_pred             HHHHHHHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEec
Q 039897          114 KRVVDEVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT  183 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vs  183 (272)
                      .   .      ...|.++.......       +..+++           ....+.+...|+++|++++..
T Consensus        96 ~---~------~~~D~i~~~~~l~~-------l~~~~~-----------~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          96 D---I------GHCAAFYDRAAMIA-------LPADMR-----------ERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             H---H------HSEEEEEEESCGGG-------SCHHHH-----------HHHHHHHHHHSCSEEEEEEEE
T ss_pred             c---c------cceeEEEEEeeeEe-------cchhhh-----------HHHHHHHHHhcCCCcEEEEEE
Confidence            1   1      24677665443321       222222           334566677788888866543

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=88.55  E-value=0.17  Score=37.90  Aligned_cols=32  Identities=25%  Similarity=0.261  Sum_probs=27.5

Q ss_pred             cEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEec
Q 039897           43 KVALVTGGDSGIGRA-----VAHCYALEGATVAFTYV   74 (272)
Q Consensus        43 k~vlVtGas~gIG~a-----ia~~l~~~G~~v~i~~r   74 (272)
                      |++.|||.+.|+|+-     +|..|+++|++|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            789999999899874     67789999999999863

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.54  E-value=0.27  Score=35.27  Aligned_cols=35  Identities=23%  Similarity=0.365  Sum_probs=28.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGA--TVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~--~v~i~~r~~   76 (272)
                      .||+|+|.||+- .|..+|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGgG~-~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGT-GGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccH-HHHHHHHHHHHcCCCCcEEEEECCC
Confidence            489999999765 49999999999985  677776654

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.54  E-value=0.22  Score=38.95  Aligned_cols=37  Identities=22%  Similarity=0.237  Sum_probs=31.6

Q ss_pred             CCcEEEEEcCCCchHHHH-----HHHHHHcCCeEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAV-----AHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~ai-----a~~l~~~G~~v~i~~r~~~   77 (272)
                      .+++|+|+.|=||+|+.+     |..|+++|++|.+++.++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            467788888899999876     7889999999999999864

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=88.52  E-value=0.15  Score=38.19  Aligned_cols=81  Identities=19%  Similarity=0.178  Sum_probs=53.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHH
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVN  122 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (272)
                      .++=+|-|+||...++.+.+ . +.+|+.+++++...+..++.+   ..    ...++.++..++.+..   ..+...  
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l---~~----~~~r~~~~~~~f~~~~---~~~~~~--   91 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKL---KE----FSDRVSLFKVSYREAD---FLLKTL--   91 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHT---GG----GTTTEEEEECCGGGHH---HHHHHT--
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhh---cc----ccccccchhHHHhhHH---HHHHHc--
Confidence            34446778888888888876 3 468999999855443333322   22    4667888998886533   232221  


Q ss_pred             hcCCccEEEEccccc
Q 039897          123 AYGKIDILVNNAAVQ  137 (272)
Q Consensus       123 ~~g~ld~vI~~ag~~  137 (272)
                      ..+.+|.++.-.|+.
T Consensus        92 ~~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          92 GIEKVDGILMDLGVS  106 (192)
T ss_dssp             TCSCEEEEEEECSCC
T ss_pred             CCCCcceeeeccchh
Confidence            135899999998884

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.46  E-value=0.24  Score=37.56  Aligned_cols=36  Identities=17%  Similarity=0.291  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRA-----VAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~a-----ia~~l~~~G~~v~i~~r~~   76 (272)
                      .+|+|.|+|+-||.|..     +|..|+++|.+|.+++-+.
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            37899999999999874     6778899999999999763

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.30  E-value=0.35  Score=37.26  Aligned_cols=35  Identities=17%  Similarity=0.125  Sum_probs=30.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEe
Q 039897           38 NKLRGKVALVTGGDSGIGRAVAHCYAL-EGATVAFTY   73 (272)
Q Consensus        38 ~~l~~k~vlVtGas~gIG~aia~~l~~-~G~~v~i~~   73 (272)
                      .+++|++++|-| .|.+|+.+++.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            468999999986 89999999999975 599998775

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.08  E-value=0.2  Score=38.90  Aligned_cols=31  Identities=35%  Similarity=0.378  Sum_probs=26.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      |+|+|| |-.|..+|.+|+++|.+|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677764 6679999999999999999998864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.56  E-value=0.47  Score=32.88  Aligned_cols=36  Identities=19%  Similarity=0.151  Sum_probs=30.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~   77 (272)
                      .+|+++|.| +|-+|.++|..|.+.|.+|.++.+...
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            467888886 578899999999999999999988643

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.54  E-value=0.35  Score=38.61  Aligned_cols=32  Identities=34%  Similarity=0.465  Sum_probs=23.8

Q ss_pred             cEEEEEcCCCchHH-----HHHHHHHHcCCeEEEEecc
Q 039897           43 KVALVTGGDSGIGR-----AVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        43 k~vlVtGas~gIG~-----aia~~l~~~G~~v~i~~r~   75 (272)
                      |+|||++|+.| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56777765444 55     6889999999999887643

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.20  E-value=0.82  Score=34.37  Aligned_cols=80  Identities=16%  Similarity=0.185  Sum_probs=49.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .|.+||-+|+++|--.++..++...+.+|+.++.++...+..++.+   ...   .-.++.++..|..+..         
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~---~~~---~~~n~~~~~~d~~~~~---------  139 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNV---ERL---GIENVIFVCGDGYYGV---------  139 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH---HHT---TCCSEEEEESCGGGCC---------
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhH---hhh---cccccccccCchHHcc---------
Confidence            4789999998877665555445545668999988754444333333   221   2445666666654311         


Q ss_pred             HHhcCCccEEEEcccc
Q 039897          121 VNAYGKIDILVNNAAV  136 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~  136 (272)
                       ...+..|.++.+++.
T Consensus       140 -~~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         140 -PEFSPYDVIFVTVGV  154 (213)
T ss_dssp             -GGGCCEEEEEECSBB
T ss_pred             -ccccchhhhhhhccH
Confidence             123579999988876

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.08  E-value=0.32  Score=38.31  Aligned_cols=33  Identities=18%  Similarity=0.204  Sum_probs=27.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      .++|+|+||+=. |...|.+|+++|++|.++-.+
T Consensus         5 ~~kViVIGaG~a-GL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGSGVS-GLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECCBHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECCCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence            457999998765 899999999999999998543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.05  E-value=0.46  Score=32.60  Aligned_cols=34  Identities=18%  Similarity=0.253  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .+.++|.| +|-||.++|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            47788887 47899999999999999999997753

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.01  E-value=0.47  Score=36.64  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=29.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEe
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALE-GATVAFTY   73 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~-G~~v~i~~   73 (272)
                      .|+||+|+|.|- |.+|..+++.|.+. |++|+.+.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            489999999997 66999999999875 98888764

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.81  E-value=0.78  Score=36.69  Aligned_cols=78  Identities=22%  Similarity=0.186  Sum_probs=49.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVV  117 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (272)
                      ..+||+||-.|++.|+   ++..+++.|+ +|+.++.++. .....+.   +..  .....++.++..|+.+.+.     
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~---~~~--n~~~~~v~~~~~~~~~~~~-----   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKI---VKA--NKLDHVVTIIKGKVEEVEL-----   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHH---HHH--TTCTTTEEEEESCTTTCCC-----
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhH---HHH--hCCccccceEeccHHHccc-----
Confidence            3579999999988875   5667788897 5888886532 2222221   111  1145668888888876431     


Q ss_pred             HHHHHhcCCccEEEEccc
Q 039897          118 DEVVNAYGKIDILVNNAA  135 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~ag  135 (272)
                           ..+.+|+++....
T Consensus        97 -----~~~~~D~ivs~~~  109 (316)
T d1oria_          97 -----PVEKVDIIISEWM  109 (316)
T ss_dssp             -----SSSCEEEEEECCC
T ss_pred             -----ccceeEEEeeeee
Confidence                 1246888887543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.35  E-value=0.5  Score=33.57  Aligned_cols=88  Identities=11%  Similarity=0.005  Sum_probs=48.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhh--cCCCCceEEeccCCChHHHHHHHHHHH
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKT--SDAKDPMAISADLGFDENCKRVVDEVV  121 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (272)
                      +|-+.|- |-+|.++|++|.+.|+.+ +.+|+.++...   ..+.......  ....+...+-..+.+.+.+....+.+.
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~   76 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALR---HQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALY   76 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHH---HHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHT
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHH---HHHHcCCcccccccccceeEEEecccchhhhhhhhcccc
Confidence            3556665 889999999999988765 55665433322   2222211000  001122333344556677777777766


Q ss_pred             HhcCCccEEEEcccc
Q 039897          122 NAYGKIDILVNNAAV  136 (272)
Q Consensus       122 ~~~g~ld~vI~~ag~  136 (272)
                      ....+-.++|.+...
T Consensus        77 ~~~~~~~~iid~sT~   91 (156)
T d2cvza2          77 PYLREGTYWVDATSG   91 (156)
T ss_dssp             TTCCTTEEEEECSCC
T ss_pred             ccccccccccccccC
Confidence            554445555555544

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.13  E-value=2.1  Score=28.79  Aligned_cols=81  Identities=15%  Similarity=0.224  Sum_probs=53.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCCh--HHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFD--ENCKRVV  117 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~  117 (272)
                      |+..+|||.-=...+...+...|.+.|++|..+...    +...   +.+      .......+-+|+.-+  +.+ +++
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~----~~a~---~~l------~~~~~dlii~D~~mp~~~G~-el~   66 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENG----NEVL---AAL------ASKTPDVLLSDIRMPGMDGL-ALL   66 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSS----HHHH---HHH------TTCCCSEEEECCSSSSSTTH-HHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCH----HHHH---HHH------HhCCCCEEEehhhcCCchHH-HHH
Confidence            345689999999999999999999999999876432    2222   222      223445555555433  333 477


Q ss_pred             HHHHHhcCCccEEEEcc
Q 039897          118 DEVVNAYGKIDILVNNA  134 (272)
Q Consensus       118 ~~~~~~~g~ld~vI~~a  134 (272)
                      .++++.+..+-+++..+
T Consensus        67 ~~l~~~~~~~piI~~t~   83 (123)
T d1krwa_          67 KQIKQRHPMLPVIIMTA   83 (123)
T ss_dssp             HHHHHHSSSCCEEESCC
T ss_pred             HHHHHhCCCCeEEEEec
Confidence            77877766666666554

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.00  E-value=0.35  Score=36.49  Aligned_cols=35  Identities=20%  Similarity=0.317  Sum_probs=29.7

Q ss_pred             cEEEEEcCCCchHH-----HHHHHHHHcCCeEEEEecccc
Q 039897           43 KVALVTGGDSGIGR-----AVAHCYALEGATVAFTYVKSQ   77 (272)
Q Consensus        43 k~vlVtGas~gIG~-----aia~~l~~~G~~v~i~~r~~~   77 (272)
                      |+|.|+++-||.|.     .+|..|+++|.+|.+++.+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            68999999999887     457789999999999987753

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.93  E-value=3.1  Score=29.31  Aligned_cols=86  Identities=19%  Similarity=0.268  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      +|+++.|.+.+||.|.-++..+...|.++--  .+    +...+.+.++-.... ...+..-+..+ .+.+...+.++.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~----~~t~~~L~~~lp~~~-~~~NPlD~~~~-~~~~~~~~~l~~~   73 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LE----EKTIEELRSFLPPMA-AVKNPVDMIAS-ARGEDYYRTAKLL   73 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CC----HHHHHHHHHHSCTTC-EESSEEECCTT-CCHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CC----HHHHHHHHHhCCCcc-cCCCcccccCC-CCHHHHHHHHHHH
Confidence            5889999999999999999999999976632  22    223332322210000 01122222333 2345566666655


Q ss_pred             HHhcCCccEEEEccc
Q 039897          121 VNAYGKIDILVNNAA  135 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag  135 (272)
                      .+ .+.+|.++....
T Consensus        74 ~~-d~~vd~v~v~~~   87 (163)
T d2csua3          74 LQ-DPNVDMLIAICV   87 (163)
T ss_dssp             HH-STTCSEEEEEEE
T ss_pred             Hc-CCCcCEEEEeec
Confidence            54 367888765443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.74  E-value=1.9  Score=30.26  Aligned_cols=79  Identities=13%  Similarity=0.182  Sum_probs=48.5

Q ss_pred             CCCCcEEEEEcCCC-chHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHH
Q 039897           39 KLRGKVALVTGGDS-GIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRV  116 (272)
Q Consensus        39 ~l~~k~vlVtGas~-gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (272)
                      .++|+.||=.|+++ .+|.+    .+.+|+ +|+.++.++...+.+++.++.+.     ...++.+++.|..      .+
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~-----~~~~~~ii~~D~~------~~   76 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTK-----AENRFTLLKMEAE------RA   76 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTT-----CGGGEEEECSCHH------HH
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcc-----cccchhhhccccc------cc
Confidence            47899998777554 45553    456787 78888887555444444433221     3345777888753      23


Q ss_pred             HHHHHHhcCCccEEEEccc
Q 039897          117 VDEVVNAYGKIDILVNNAA  135 (272)
Q Consensus       117 ~~~~~~~~g~ld~vI~~ag  135 (272)
                      ++   ...+..|+++....
T Consensus        77 l~---~~~~~fDiIf~DPP   92 (152)
T d2esra1          77 ID---CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HH---HBCSCEEEEEECCS
T ss_pred             cc---ccccccceeEechh
Confidence            32   23457899987654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=85.36  E-value=1.3  Score=31.39  Aligned_cols=44  Identities=16%  Similarity=0.154  Sum_probs=31.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecccchhhhHHHHH
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALE--GATVAFTYVKSQEEKDAQETL   86 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~--G~~v~i~~r~~~~~~~~~~~~   86 (272)
                      -|++.|.|+||.||......+.+.  .++|+.+.-+. +...+.+.+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~   47 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAA   47 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHH
Confidence            379999999999999999988775  56777765542 334444433

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.28  E-value=4.4  Score=29.21  Aligned_cols=84  Identities=14%  Similarity=0.155  Sum_probs=55.0

Q ss_pred             CCCCCcEEEEEc-CCCchHHHHHHHHHHcCC-eEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           38 NKLRGKVALVTG-GDSGIGRAVAHCYALEGA-TVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        38 ~~l~~k~vlVtG-as~gIG~aia~~l~~~G~-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ..+.|+++|=.. |+|.+|.+    .+.+|+ +|+.++.+......+++.++.+.     ...++.++..|+.      +
T Consensus        38 ~~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~-----~~~~~~i~~~D~~------~  102 (182)
T d2fhpa1          38 PYFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITK-----EPEKFEVRKMDAN------R  102 (182)
T ss_dssp             SCCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHT-----CGGGEEEEESCHH------H
T ss_pred             HhcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhh-----cccccccccccch------h
Confidence            356788888555 55667765    456888 49999888665555555554432     2345677777763      4


Q ss_pred             HHHHHHHhcCCccEEEEcccc
Q 039897          116 VVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      +++.+.......|+|+....+
T Consensus       103 ~l~~~~~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         103 ALEQFYEEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HHHHHHHTTCCEEEEEECCCG
T ss_pred             hhhhhcccCCCcceEEechhh
Confidence            566655555678999877654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.24  E-value=0.27  Score=38.11  Aligned_cols=32  Identities=28%  Similarity=0.290  Sum_probs=27.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .|+|+||+ --|...|.+|+++|++|.++.+++
T Consensus         2 ~V~IIGaG-~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGG-ISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECCB-HHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECCC-HHHHHHHHHHHhCCCCEEEEecCC
Confidence            58899984 459999999999999999997653

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.22  E-value=0.68  Score=36.45  Aligned_cols=117  Identities=12%  Similarity=-0.009  Sum_probs=60.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+++||=.|++.|.   ++..|+++|++|+.++.++...+.+++.........  .........+|....+      ..+
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~  124 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEP--AFDKWVIEEANWLTLD------KDV  124 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSH--HHHTCEEEECCGGGHH------HHS
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhccccc--ccceeeeeeccccccc------ccc
Confidence            36789999977764   456678889999999998555444433332211000  0011223333332111      000


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEE
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIIN  181 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~  181 (272)
                       ...+..|.+++........ +-...+.++.           ..+++.+...|+++|.+|+
T Consensus       125 -~~~~~fd~v~~~~~~~~~~-~~~~~~~~~~-----------~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         125 -PAGDGFDAVICLGNSFAHL-PDSKGDQSEH-----------RLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             -CCTTCEEEEEECSSCGGGS-CCTTSSSHHH-----------HHHHHHHHHTEEEEEEEEE
T ss_pred             -CCCCCceEEEEecCchhhc-CCcccChHHH-----------HHHHHHHHHHcCcCcEEEE
Confidence             0114688887654332211 1111122232           3356777888899998776

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.22  E-value=0.61  Score=32.18  Aligned_cols=91  Identities=11%  Similarity=0.045  Sum_probs=52.8

Q ss_pred             CCCCCcEEEEEcCC---CchHHHHHHHHHHcC-CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHH
Q 039897           38 NKLRGKVALVTGGD---SGIGRAVAHCYALEG-ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENC  113 (272)
Q Consensus        38 ~~l~~k~vlVtGas---~gIG~aia~~l~~~G-~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (272)
                      ..++-|.|.|.|+|   +.+|..+.+.|.+.| .+|+.+......- .-.+....+.+    ....+....+ +...+.+
T Consensus         4 ~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i-~G~~~y~sl~d----lp~~vDlvvi-~vp~~~~   77 (129)
T d2csua1           4 YFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV-QGVKAYKSVKD----IPDEIDLAII-VVPKRFV   77 (129)
T ss_dssp             TTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE-TTEECBSSTTS----CSSCCSEEEE-CSCHHHH
T ss_pred             HhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc-CCeEeecchhh----cCCCCceEEE-ecChHHh
Confidence            35788999999999   799999999887665 5888775442210 00011111111    1222222222 2346778


Q ss_pred             HHHHHHHHHhcCCcc-EEEEcccc
Q 039897          114 KRVVDEVVNAYGKID-ILVNNAAV  136 (272)
Q Consensus       114 ~~~~~~~~~~~g~ld-~vI~~ag~  136 (272)
                      .++++++.+.  ++. ++|..+|+
T Consensus        78 ~~~~~~~~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          78 KDTLIQCGEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHHHHHHHHH--TCCEEEECCCSS
T ss_pred             HHHHHHHHHc--CCCEEEEecccc
Confidence            8888888766  344 45555555

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.09  E-value=0.46  Score=32.32  Aligned_cols=34  Identities=24%  Similarity=0.201  Sum_probs=28.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      +|.++|.| +|-+|.++|..|++.|.+|.++.+.+
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            46777776 57889999999999999999998763

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=85.06  E-value=0.45  Score=34.29  Aligned_cols=34  Identities=18%  Similarity=0.129  Sum_probs=26.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      +++.|+|.|| |.+|.++|..|.+.|++|.++.+.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEec
Confidence            3677877774 677999999999999876665444

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.19  E-value=1  Score=33.70  Aligned_cols=103  Identities=14%  Similarity=0.153  Sum_probs=59.9

Q ss_pred             CCcEEEEEcCCCchH-HHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIG-RAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        41 ~~k~vlVtGas~gIG-~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      .|.+||=.|++.|.- ..+++ +...| +|+.++.++...+.+.+..+        ...++.++..|..++......+  
T Consensus        56 pg~~VLDlGcG~G~~~~~la~-~v~~g-~V~gvDis~~~i~~a~~~a~--------~~~ni~~i~~d~~~~~~~~~~~--  123 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLAD-IVDEG-IIYAVEYSAKPFEKLLELVR--------ERNNIIPLLFDASKPWKYSGIV--  123 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHH-HTTTS-EEEEECCCHHHHHHHHHHHH--------HCSSEEEECSCTTCGGGTTTTC--
T ss_pred             CCCEEEEeCCcCCHHHHHHHH-hccCC-eEEEEeCCHHHHHHHHHHhh--------ccCCceEEEeeccCcccccccc--
Confidence            378999999877743 33333 33334 89999998655444443332        2357888888888765432222  


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT  182 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v  182 (272)
                           ..+|++++.....  .      .              .-.+++.+...++.+|.++.+
T Consensus       124 -----~~vd~v~~~~~~~--~------~--------------~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         124 -----EKVDLIYQDIAQK--N------Q--------------IEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             -----CCEEEEEECCCST--T------H--------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred             -----ceEEEEEecccCh--h------h--------------HHHHHHHHHHHhccCCeEEEE
Confidence                 3466665543221  0      0              112445566778888887654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=84.17  E-value=4.1  Score=27.95  Aligned_cols=90  Identities=14%  Similarity=0.081  Sum_probs=51.9

Q ss_pred             CCCcEEEEEcCC---CchHHHHHHHHHHcCCeEEEEecccchhhh-HHHHHHHHHHhhhcCCCCceEEeccCCChHHHHH
Q 039897           40 LRGKVALVTGGD---SGIGRAVAHCYALEGATVAFTYVKSQEEKD-AQETLEILREAKTSDAKDPMAISADLGFDENCKR  115 (272)
Q Consensus        40 l~~k~vlVtGas---~gIG~aia~~l~~~G~~v~i~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (272)
                      ++-|.|.|.|+|   +..|..+.+.|.+.|++++++.-+....+- -.+....+.+    ....+..+.+ +...+.+.+
T Consensus        11 ~~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~----i~~~iD~v~v-~~p~~~v~~   85 (136)
T d1iuka_          11 SQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLD----LKEPVDILDV-FRPPSALMD   85 (136)
T ss_dssp             HHCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGG----CCSCCSEEEE-CSCHHHHTT
T ss_pred             hCCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhh----ccCCCceEEE-eccHHHHHH
Confidence            357899999999   479999999999999999888654321100 0000000000    1222222222 334566667


Q ss_pred             HHHHHHHhcCCccEEEEcccc
Q 039897          116 VVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       116 ~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      +++++.+.  ++..++...|.
T Consensus        86 ~v~~~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          86 HLPEVLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             THHHHHHH--CCSCEEECTTC
T ss_pred             HHHHHHhh--CCCeEEEecCc
Confidence            77776655  35566666665

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=84.09  E-value=0.48  Score=37.27  Aligned_cols=32  Identities=13%  Similarity=0.163  Sum_probs=26.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      .|+|+|| |-+|.++|.+|+++|. +|.++.++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4777775 4789999999999997 599998763

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=84.03  E-value=1.3  Score=33.56  Aligned_cols=76  Identities=17%  Similarity=0.003  Sum_probs=48.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      -.|.+||-.|+++|--.   ..|++.+.+|+.+.+++.-.+..    +....    ...++.++..|...-         
T Consensus        69 ~~g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A----~~~~~----~~~nv~~~~~d~~~g---------  128 (224)
T d1vbfa_          69 HKGQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYA----SKLLS----YYNNIKLILGDGTLG---------  128 (224)
T ss_dssp             CTTCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHH----HHHHT----TCSSEEEEESCGGGC---------
T ss_pred             cccceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHH----HHHHh----cccccccccCchhhc---------
Confidence            35789999998888543   34666778999998864333222    22211    345778888887431         


Q ss_pred             HHHhcCCccEEEEcccc
Q 039897          120 VVNAYGKIDILVNNAAV  136 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~  136 (272)
                       ....++.|.++.+++.
T Consensus       129 -~~~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         129 -YEEEKPYDRVVVWATA  144 (224)
T ss_dssp             -CGGGCCEEEEEESSBB
T ss_pred             -chhhhhHHHHHhhcch
Confidence             1123678999988876

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.80  E-value=0.47  Score=36.11  Aligned_cols=33  Identities=30%  Similarity=0.274  Sum_probs=27.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecccch
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQE   78 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~   78 (272)
                      |+|+||+- -|..+|..|+++|++|+++.++...
T Consensus         5 ViIIGaG~-aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGGGP-SGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECcCH-HHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            67888764 5899999999999999999886543

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=83.74  E-value=0.42  Score=35.97  Aligned_cols=32  Identities=16%  Similarity=0.201  Sum_probs=26.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEeccc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGA-TVAFTYVKS   76 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~-~v~i~~r~~   76 (272)
                      .|+|+||+-. |..+|.+|+++|. +|.++.++.
T Consensus         2 ~V~IIGaG~a-GL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMS-GISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHH-HHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHH-HHHHHHHHHhCCCCcEEEEECCC
Confidence            4888887665 8999999999997 699987653

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=83.59  E-value=0.78  Score=33.01  Aligned_cols=89  Identities=10%  Similarity=0.044  Sum_probs=51.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEE-ecccchhhhHHHHHHHHHHh----------hhcCCCCceEEeccCCCh
Q 039897           43 KVALVTGGDSGIGRAVAHCYALE-GATVAFT-YVKSQEEKDAQETLEILREA----------KTSDAKDPMAISADLGFD  110 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~-G~~v~i~-~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~D~~~~  110 (272)
                      -+|.|.|++|.+|+++++...+. +..++.. ++.....  ......++...          .......+. +-.|++.+
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~--~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p   81 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRP   81 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchh--ccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccH
Confidence            37999999999999999988876 5554433 2221100  00000000000          000011122 45799999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcccc
Q 039897          111 ENCKRVVDEVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       111 ~~~~~~~~~~~~~~g~ld~vI~~ag~  136 (272)
                      +.+.+.++...+.  ++.+||=..|+
T Consensus        82 ~~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          82 EGTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHHhc--cceeEEecCCC
Confidence            9999888876654  67777776665

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.40  E-value=0.68  Score=30.98  Aligned_cols=33  Identities=24%  Similarity=0.323  Sum_probs=28.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      |+++|.| +|-+|.++|..|.+.|.+|.++.+.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            5677775 57899999999999999999997753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=83.38  E-value=0.46  Score=36.89  Aligned_cols=30  Identities=20%  Similarity=0.264  Sum_probs=25.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      |+|+|| |-.|..+|.+|+++|++|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            677764 556999999999999999999875

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=83.19  E-value=2  Score=30.87  Aligned_cols=80  Identities=11%  Similarity=0.027  Sum_probs=45.3

Q ss_pred             CCCcEEEEEcCCC-chHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           40 LRGKVALVTGGDS-GIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        40 l~~k~vlVtGas~-gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+|++||=.|+++ .+|    ..++.+|++|+.++.++...+.+++.++.+       +....++..|.      ..+..
T Consensus        40 ~~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~-------~~~~~v~~~~~------d~~~~  102 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRT-------GLGARVVALPV------EVFLP  102 (171)
T ss_dssp             TTCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHH-------TCCCEEECSCH------HHHHH
T ss_pred             cCCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhh-------ccccceeeeeh------hcccc
Confidence            4677777666554 444    346678999999988865554444444332       22223333322      22333


Q ss_pred             HHHHhcCCccEEEEcccc
Q 039897          119 EVVNAYGKIDILVNNAAV  136 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~  136 (272)
                      .........|+|+.+..+
T Consensus       103 ~~~~~~~~fD~If~DPPY  120 (171)
T d1ws6a1         103 EAKAQGERFTVAFMAPPY  120 (171)
T ss_dssp             HHHHTTCCEEEEEECCCT
T ss_pred             cccccCCccceeEEcccc
Confidence            333444579999888654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.02  E-value=0.54  Score=36.66  Aligned_cols=32  Identities=9%  Similarity=0.083  Sum_probs=28.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      .|+|.||+ -.|..+|..|+++|.+|.++.+++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            57888887 669999999999999999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.81  E-value=0.97  Score=30.62  Aligned_cols=32  Identities=25%  Similarity=0.132  Sum_probs=27.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           43 KVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        43 k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      +.++|.| +|-||.++|..|.+.|.+|.++.++
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            4677776 5789999999999999999999764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.78  E-value=2.3  Score=30.95  Aligned_cols=106  Identities=12%  Similarity=0.098  Sum_probs=64.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           40 LRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        40 l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      +.+.+||=.|++.|  . .+..|+++|++|+.++.++...+.++......      .-..+.+...|+.+..     .  
T Consensus        29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~------~~~~~~~~~~d~~~~~-----~--   92 (198)
T d2i6ga1          29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAE------GLDNLQTDLVDLNTLT-----F--   92 (198)
T ss_dssp             SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCTTEEEEECCTTTCC-----C--
T ss_pred             CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc------cccchhhhheeccccc-----c--
Confidence            45668999998655  3 55678899999999999855444443332211      2234666777776533     1  


Q ss_pred             HHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEec
Q 039897          120 VVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTT  183 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vs  183 (272)
                          .+..|+|+.+..+..       ++.+++           ..+++.+...++++|.+++..
T Consensus        93 ----~~~fD~I~~~~~~~~-------~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1          93 ----DGEYDFILSTVVMMF-------LEAQTI-----------PGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             ----CCCEEEEEEESCGGG-------SCTTHH-----------HHHHHHHHHTEEEEEEEEEEE
T ss_pred             ----cccccEEEEeeeeec-------CCHHHH-----------HHHHHHHHHHcCCCcEEEEEE
Confidence                146899887665532       111222           224555667778888877654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.74  E-value=1.6  Score=29.14  Aligned_cols=33  Identities=21%  Similarity=0.249  Sum_probs=26.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEG---ATVAFTYVK   75 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G---~~v~i~~r~   75 (272)
                      .+.++|.|| |.+|.++|..|.+.|   .+|.++.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            478889887 899999998776654   579888775

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=82.51  E-value=4.1  Score=25.73  Aligned_cols=33  Identities=27%  Similarity=0.184  Sum_probs=25.4

Q ss_pred             cEEEEEcCCCchHH-HHHHHHHHcCCeEEEEeccc
Q 039897           43 KVALVTGGDSGIGR-AVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        43 k~vlVtGas~gIG~-aia~~l~~~G~~v~i~~r~~   76 (272)
                      .++-++|- +|+|. ++|+.|.++|+.|...|+..
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~   35 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEE   35 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            35666654 45565 78999999999999999874

>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=82.14  E-value=5.2  Score=34.12  Aligned_cols=86  Identities=12%  Similarity=0.062  Sum_probs=51.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           39 KLRGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        39 ~l~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      .+.||++.|.| ......++++.|.+.|..++.+.-..............+.+..  .+.++..+  .-.|..++.+++.
T Consensus       357 ~l~GkrvaI~g-d~~~~~~la~fL~ElG~e~~~v~~~~~~~~~~~~~~~~l~~~~--~g~~~~v~--~~~Dl~~l~~~i~  431 (519)
T d1qh8b_         357 WLHGKKFGLYG-DPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASP--YGRDSEVF--INCDLWHFRSLMF  431 (519)
T ss_dssp             HHTTCEEEEES-CHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHST--TCTTCEEE--ESCCHHHHHHHHH
T ss_pred             HcCCcEEEEEC-CcHHHHHHHHHHHHcCCeeeEEEecCCCHHHHHHHHHHHHhCc--CCCCCEEE--ECCCHHHHHHHHh
Confidence            48899999976 4667888999999999997766554443333222222232210  12233333  2334556666665


Q ss_pred             HHHHhcCCccEEEEcc
Q 039897          119 EVVNAYGKIDILVNNA  134 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~a  134 (272)
                      +.     ++|++|-|.
T Consensus       432 ~~-----~pDLliG~s  442 (519)
T d1qh8b_         432 TR-----QPDFMIGNS  442 (519)
T ss_dssp             HH-----CCSEEEECT
T ss_pred             hc-----CCCEEEECC
Confidence            43     799998663

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=81.90  E-value=2.5  Score=31.50  Aligned_cols=98  Identities=14%  Similarity=0.007  Sum_probs=58.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEV  120 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (272)
                      .+++||=.|.+.|.   .+..|++.|++|+.++.++...+.+    .+        ......+..|+.+..         
T Consensus        42 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~l~~a----~~--------~~~~~~~~~~~~~l~---------   97 (246)
T d2avna1          42 NPCRVLDLGGGTGK---WSLFLQERGFEVVLVDPSKEMLEVA----RE--------KGVKNVVEAKAEDLP---------   97 (246)
T ss_dssp             SCCEEEEETCTTCH---HHHHHHTTTCEEEEEESCHHHHHHH----HH--------HTCSCEEECCTTSCC---------
T ss_pred             CCCEEEEECCCCch---hcccccccceEEEEeeccccccccc----cc--------ccccccccccccccc---------
Confidence            46788988877663   3457788899999998874332221    11        111235667766531         


Q ss_pred             HHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEe
Q 039897          121 VNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINT  182 (272)
Q Consensus       121 ~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~v  182 (272)
                       -..+..|+|+....+....   .  +.              -.+++.+...|+++|.+++.
T Consensus        98 -~~~~~fD~ii~~~~~~~~~---~--d~--------------~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1          98 -FPSGAFEAVLALGDVLSYV---E--NK--------------DKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             -SCTTCEEEEEECSSHHHHC---S--CH--------------HHHHHHHHHHEEEEEEEEEE
T ss_pred             -cccccccceeeecchhhhh---h--hH--------------HHHHHHHHhhcCcCcEEEEE
Confidence             0125799998876543211   1  11              22356667788888877654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.82  E-value=0.73  Score=35.29  Aligned_cols=35  Identities=17%  Similarity=0.119  Sum_probs=28.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecccchh
Q 039897           44 VALVTGGDSGIGRAVAHCYALEGATVAFTYVKSQEE   79 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~~~~   79 (272)
                      -|+|+||+.. |...|..|+++|.+|.++.+++...
T Consensus         6 DViIIGaG~a-Gl~aA~~la~~G~~V~vlEk~~~~G   40 (253)
T d2gqfa1           6 ENIIIGAGAA-GLFCAAQLAKLGKSVTVFDNGKKIG   40 (253)
T ss_dssp             SEEEECCSHH-HHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             cEEEECcCHH-HHHHHHHHHHCCCcEEEEecCCCCC
Confidence            3778886554 8899999999999999999876543

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=81.46  E-value=5.4  Score=31.24  Aligned_cols=34  Identities=15%  Similarity=0.106  Sum_probs=26.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGATVAFTYVK   75 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~   75 (272)
                      ....+|+..+|.-|.++|..-+..|.+++++--.
T Consensus        68 ~~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~  101 (318)
T d1v71a1          68 RKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPL  101 (318)
T ss_dssp             HHHCEEECCSSHHHHHHHHHHHHTTCCEEEEEET
T ss_pred             ccceeeeeccchhhHHHHHhhcccccceeecccc
Confidence            3445888899999999999888888887666443

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.37  E-value=1.6  Score=35.79  Aligned_cols=32  Identities=13%  Similarity=0.167  Sum_probs=27.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHH------cCCeEEEEeccc
Q 039897           44 VALVTGGDSGIGRAVAHCYAL------EGATVAFTYVKS   76 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~------~G~~v~i~~r~~   76 (272)
                      =|+|+||+-. |...|..|++      +|.+|+++.+..
T Consensus        34 DViIVGgGPA-GlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGAGPA-GLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             SEEEECCSHH-HHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             CEEEECCCHH-HHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            5788887765 8999999997      899999998864

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.33  E-value=5.6  Score=26.39  Aligned_cols=86  Identities=17%  Similarity=0.100  Sum_probs=49.9

Q ss_pred             cEEEEEcCC---CchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHH
Q 039897           43 KVALVTGGD---SGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDE  119 (272)
Q Consensus        43 k~vlVtGas---~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (272)
                      |.+.|.|+|   +..|..+.+.|.+.|++|+.+..+...- .-.+....+.+    ....+....+ +...+.+.+.+++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i-~G~~~y~sl~~----lp~~~D~vvi-~vp~~~~~~~l~~   75 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-EGLKCYRSVRE----LPKDVDVIVF-VVPPKVGLQVAKE   75 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-TTEECBSSGGG----SCTTCCEEEE-CSCHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc-cCccccccchh----ccccceEEEE-EeCHHHHHHHHHH
Confidence            689999998   5799999999999999988875432110 00000011111    1222232221 2345667777777


Q ss_pred             HHHhcCCccEEEEcccc
Q 039897          120 VVNAYGKIDILVNNAAV  136 (272)
Q Consensus       120 ~~~~~g~ld~vI~~ag~  136 (272)
                      +.+.  ++..++...|.
T Consensus        76 ~~~~--g~k~v~~~~g~   90 (116)
T d1y81a1          76 AVEA--GFKKLWFQPGA   90 (116)
T ss_dssp             HHHT--TCCEEEECTTS
T ss_pred             HHhc--CCceEEeccch
Confidence            7664  46666665554

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.21  E-value=0.66  Score=36.73  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=25.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      |+|+||+-. |...|.+|+++|++|+++.++.
T Consensus         2 ViVIGaG~a-GL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGIS-GMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECCBHH-HHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHH-HHHHHHHHHhCCCCEEEEecCC
Confidence            678887655 9999999999999999997653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=81.20  E-value=2.4  Score=30.89  Aligned_cols=75  Identities=12%  Similarity=0.073  Sum_probs=45.4

Q ss_pred             EcCCCchHHHHHHHHHHcCCeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHHHHHHhcCCc
Q 039897           48 TGGDSGIGRAVAHCYALEGATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVDEVVNAYGKI  127 (272)
Q Consensus        48 tGas~gIG~aia~~l~~~G~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (272)
                      .-+|-|-|-+ .+.+++++.+|+.+++++......    ..+      ...++.++..++++.+   ..+...  ..+.+
T Consensus        23 vD~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a----~~~------~~~~~~~~~~~f~~~~---~~l~~~--~~~~v   86 (182)
T d1wg8a2          23 VDATLGGAGH-ARGILERGGRVIGLDQDPEAVARA----KGL------HLPGLTVVQGNFRHLK---RHLAAL--GVERV   86 (182)
T ss_dssp             EETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHH----HHT------CCTTEEEEESCGGGHH---HHHHHT--TCSCE
T ss_pred             EEeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHH----hhc------cccceeEeehHHHHHH---HHHHHc--CCCcc
Confidence            3444444444 445566778999999985432221    111      4567888888776533   333322  23679


Q ss_pred             cEEEEcccccC
Q 039897          128 DILVNNAAVQY  138 (272)
Q Consensus       128 d~vI~~ag~~~  138 (272)
                      |.++..-|+..
T Consensus        87 dgIl~DLGvSs   97 (182)
T d1wg8a2          87 DGILADLGVSS   97 (182)
T ss_dssp             EEEEEECSCCH
T ss_pred             CEEEEEccCCH
Confidence            99999998853

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.15  E-value=0.42  Score=34.95  Aligned_cols=35  Identities=14%  Similarity=0.068  Sum_probs=29.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      +++.|+|+||+. .|...|..+++.|.+|+++.+..
T Consensus         4 k~~dVvIIGGGp-aGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGP-AGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSH-HHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECCCH-HHHHHHHHHHHcCCceEEEEeec
Confidence            356899999776 69999999999999999998754

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.63  E-value=4.4  Score=31.85  Aligned_cols=115  Identities=14%  Similarity=0.106  Sum_probs=62.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecccchhhhHHHHHHHHHHhhhcCCCCceEEeccCCChHHHHHHHH
Q 039897           41 RGKVALVTGGDSGIGRAVAHCYALEG--ATVAFTYVKSQEEKDAQETLEILREAKTSDAKDPMAISADLGFDENCKRVVD  118 (272)
Q Consensus        41 ~~k~vlVtGas~gIG~aia~~l~~~G--~~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (272)
                      +-|.|||.|+++|   .+++.+++..  .+|.++..++.--+..++.......  .....++..+..|..      ++++
T Consensus        89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~--~~~d~rv~v~~~Da~------~~l~  157 (295)
T d1inla_          89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSC--GFDDPRAEIVIANGA------EYVR  157 (295)
T ss_dssp             SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHH------HHGG
T ss_pred             CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcc--cccCCCcEEEhhhHH------HHHh
Confidence            3579999999887   4566666653  5799998886554444443333221  113567777776642      3332


Q ss_pred             HHHHhcCCccEEEEcccccCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHhccccCCeEEEecC
Q 039897          119 EVVNAYGKIDILVNNAAVQYKAGSVEEIDEERLERVFRTNIFSHFFMTRHSLRHMNEGSAIINTTS  184 (272)
Q Consensus       119 ~~~~~~g~ld~vI~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~g~iv~vsS  184 (272)
                         +.-++.|++|.-.--.. ..+...+              -+.-..+.+...|+++|-++.-+.
T Consensus       158 ---~~~~~yDvIi~D~~dp~-~~~~~~L--------------~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         158 ---KFKNEFDVIIIDSTDPT-AGQGGHL--------------FTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             ---GCSSCEEEEEEEC-----------C--------------CSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             ---cCCCCCCEEEEcCCCCC-cCchhhh--------------ccHHHHHHHHhhcCCCcEEEEecC
Confidence               33357999987542210 0111111              112333445667788887776544

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=80.33  E-value=2.5  Score=29.69  Aligned_cols=32  Identities=13%  Similarity=0.049  Sum_probs=24.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC----CeEEEEecc
Q 039897           44 VALVTGGDSGIGRAVAHCYALEG----ATVAFTYVK   75 (272)
Q Consensus        44 ~vlVtGas~gIG~aia~~l~~~G----~~v~i~~r~   75 (272)
                      +|.|.||||-.|+++.+.|.++.    ..+..++.+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            58999999999999999887643    355554443

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=80.07  E-value=0.89  Score=32.26  Aligned_cols=26  Identities=15%  Similarity=0.249  Sum_probs=23.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC
Q 039897           42 GKVALVTGGDSGIGRAVAHCYALEGA   67 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~~~G~   67 (272)
                      |-+|.|.||||-.|.++.+.|.++.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCC
Confidence            34799999999999999999988864

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.04  E-value=0.99  Score=33.41  Aligned_cols=31  Identities=19%  Similarity=0.132  Sum_probs=26.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeccc
Q 039897           45 ALVTGGDSGIGRAVAHCYALEGATVAFTYVKS   76 (272)
Q Consensus        45 vlVtGas~gIG~aia~~l~~~G~~v~i~~r~~   76 (272)
                      ++|+||+ -.|...|..+++.|.+|+++.+..
T Consensus         6 vvVIGgG-paGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGGG-PGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECCC-HHHHHHHHHHHHCCCcEEEEEecC
Confidence            7888885 559999999999999999997753

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.03  E-value=1.4  Score=30.39  Aligned_cols=35  Identities=20%  Similarity=0.251  Sum_probs=27.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH----HcCCeEEEEecccc
Q 039897           42 GKVALVTGGDSGIGRAVAHCYA----LEGATVAFTYVKSQ   77 (272)
Q Consensus        42 ~k~vlVtGas~gIG~aia~~l~----~~G~~v~i~~r~~~   77 (272)
                      .|+++|.|| |.+|.++|..|+    +.|.+|.++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            678888875 778888888775    46999999877543