Citrus Sinensis ID: 039937

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQS
Secondary Structure (PSIPRED)
cccccEEEccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEccccccccccccccccccccccccccEEEccccccHHHHHccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHcccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHccccccccccEEEEEccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHEEcccccccHHHHccccEEccccccEEEEEEcccccccHHHHHccccccccHHHHHHHHHHHHHcccccccccHcHHHHHHHHHccHHHHccHHHcccccHHcEEEEcc
Coil and Loop (DISEMBL)
MHWLSRIDIsynalqgpipdsttfrdapmkalqgnkrlcgdirgfpsckvfnsridrvtnnfddehcigkdgqGVVTKLRYHLEKLLRQEISFTtssknglldleYEARAFDFGIAKFfkldssnrtelagtYGYIALELTYTLKVAkkcgmhssgLLALEVmkgkhprhfIFSICssssnfviapheildprfqphhtmfgvncyqs
Flexible Loop (DISEMBL)
MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVtnnfddehcigkdgqgvVTKLRYHLEKLLRQEISfttssknglLDLEYEARAFDFGIAKFfkldssnrtELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQS
Low Complexity Region (SEG)
MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHfifsicssssnfviAPHEILDPRFQPHHTMFGVNCYQS
Disordered region (IsUnstruct)
***LSRIDISYNALQG*************KALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCY**
Disordered Region (DISOPRED)
MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ*
Disordered Region (DISEMBL)
MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQS
Disordered Region (DISPRO)
MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
Q9LP24	1120	Probable leucine-rich rep	yes	no	0.591	0.109	0.417	3e-19
Q8VZG8	1045	Probable LRR receptor-lik	no	no	0.461	0.091	0.474	5e-19
Q9FII5	1041	Leucine-rich repeat recep	no	no	0.326	0.065	0.492	3e-11
Q9SHI2	1101	Leucine-rich repeat recep	no	no	0.346	0.065	0.465	5e-11
O49318	1124	Probable leucine-rich rep	no	no	0.346	0.064	0.452	1e-10
Q9FRS6	1029	Leucine-rich repeat recep	no	no	0.447	0.090	0.410	2e-10
Q9M2Z1	1002	Leucine-rich repeat recep	no	no	0.346	0.071	0.459	3e-10
O49545	1003	Leucine-rich repeat recep	no	no	0.456	0.094	0.354	3e-10
Q9SYQ8	980	Receptor protein kinase C	no	no	0.346	0.073	0.459	3e-10
Q9LVP0	1102	Probable leucine-rich rep	no	no	0.365	0.068	0.441	4e-10

>sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 4/127 (3%)

Query: 73   QGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGT 132
            +GV   L Y     +   +    SS N LLD +Y A+  DFG AK  K DSSN + +AGT
Sbjct: 960  KGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVAGT 1019

Query: 133  YGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFV----IAPHE 188
            YGY+A E  YT+KV +KC ++S G+L LE++ GKHP   + S+ SS    +    I+   
Sbjct: 1020 YGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISDER 1079

Query: 189  ILDPRFQ 195
            +L+PR Q
Sbjct: 1080 VLEPRGQ 1086

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3

 Score = 94.4 bits (233), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 65/99 (65%)

Query: 96   SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
            SS N LL  +YEA+  DFG AK  K DSSN + +AGTYGY+A EL Y +KV +KC ++S 
Sbjct: 907  SSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSF 966

Query: 156  GLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRF 194
            G+L LEV+KG+HP   + ++ SS  +  ++   I D R 
Sbjct: 967  GVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRL 1005

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FII5|TDR_ARATH Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana GN=TDR PE=1 SV=1

 Score = 68.6 bits (166), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 1/69 (1%)

Query: 99  NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
           N LLD ++EAR  DFG+AK  + D S  + +AG+YGYIA E  YTL+V KK  ++S G++
Sbjct: 857 NILLDADFEARVADFGVAKLIQTDES-MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVI 915

Query: 159 ALEVMKGKH 167
            LE++ GK 
Sbjct: 916 LLEIITGKR 924

Acts with CLE41p and CLE44p peptides as a ligand-receptor pair in a signal transduction pathway involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Mediates repression of tracheary element differentiation and the promotion of procambial cells formation and polar division adjacent to phloem cells in the veins.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2

 Score = 67.8 bits (164), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 97   SKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
            S N LLD  ++A   DFG+AK   L  S + + +AG+YGYIA E  YT+KV +KC ++S 
Sbjct: 929  SNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSF 988

Query: 156  GLLALEVMKGKHP 168
            G++ LE++ GK P
Sbjct: 989  GVVLLELITGKPP 1001

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 97   SKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
            S N L+D  +EA   DFG+AK   +  S + + +AG+YGYIA E  YT+KV +KC ++S 
Sbjct: 955  SNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSF 1014

Query: 156  GLLALEVMKGKHP 168
            G++ LE++ GK P
Sbjct: 1015 GVVLLELLTGKAP 1027

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FRS6|PXL1_ARATH Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 52/95 (54%)

Query: 74  GVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTY 133
           GVV  L Y         I     S N LLD   EAR  DFG+AK     +   + +AG+Y
Sbjct: 834 GVVQGLNYLHNDCYPPIIHRDIKSNNILLDSNLEARIADFGLAKMMLHKNETVSMVAGSY 893

Query: 134 GYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
           GYIA E  YTLK+ +K  ++S G++ LE++ GK P
Sbjct: 894 GYIAPEYGYTLKIDEKSDIYSLGVVLLELVTGKMP 928

Involved in the regulation of procambium maintenance and polarity during vascular-tissue development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1

 Score = 65.5 bits (158), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHS 154
           S N LLD  +EA   DFG+AKF +   ++   + +AG+YGYIA E  YTLKV +K  ++S
Sbjct: 819 SNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYS 878

Query: 155 SGLLALEVMKGKHP 168
            G++ LE++ GK P
Sbjct: 879 FGVVLLELITGKKP 892

Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1

 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 15/110 (13%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHS 154
           S N LLD  +EA   DFG+AKF +   ++   + +AG+YGYIA E  YTLKV +K  ++S
Sbjct: 823 SNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYS 882

Query: 155 SGLLALEVMKGKHP----------RHFIFSICSSSSNFVIAPHEILDPRF 194
            G++ LE++ G+ P            ++  +  S+ + V+   ++LDPR 
Sbjct: 883 FGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKDSVL---KVLDPRL 929

Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3

 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 2/74 (2%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHS 154
           S N LLD ++EA   DFG+AKF    +++   + +AG+YGYIA E  YTLKV +K  ++S
Sbjct: 820 SNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYS 879

Query: 155 SGLLALEVMKGKHP 168
            G++ LE++ GK P
Sbjct: 880 FGVVLLELIAGKKP 893

Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)

Query: 97   SKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
            S N LLD ++EA   DFG+AK   +  S + + +AG+YGYIA E  YT+KV +K  ++S 
Sbjct: 935  SNNILLDDKFEAHVGDFGLAKVIDMPHSKSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSY 994

Query: 156  GLLALEVMKGKHPRHFI 172
            G++ LE++ GK P   I
Sbjct: 995  GVVLLELLTGKAPVQPI 1011

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
147767326	1032	hypothetical protein VITISV_008862 [Viti	0.596	0.120	0.483	1e-23
359491509	1032	PREDICTED: probable LRR receptor-like se	0.485	0.097	0.554	2e-23
297738138	577	unnamed protein product [Vitis vinifera]	0.485	0.175	0.539	3e-21
225466223	736	PREDICTED: probable leucine-rich repeat	0.485	0.137	0.539	3e-21
297734328	2131	unnamed protein product [Vitis vinifera]	0.716	0.069	0.387	6e-21
297734327	622	unnamed protein product [Vitis vinifera]	0.490	0.163	0.529	9e-21
147772402	996	hypothetical protein VITISV_022117 [Viti	0.480	0.100	0.534	1e-20
225456159	1038	PREDICTED: probable LRR receptor-like se	0.490	0.098	0.529	1e-20
296087789	975	unnamed protein product [Vitis vinifera]	0.894	0.190	0.302	5e-19
359491512	1078	PREDICTED: probable LRR receptor-like se	0.485	0.093	0.495	6e-19

>gi|147767326|emb|CAN68996.1| hypothetical protein VITISV_008862 [Vitis vinifera]

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 78/124 (62%)

Query: 73  QGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGT 132
           +GV   L Y     +   +    SS N LLD +YEA   DFG AKF KLDSSN + LAGT
Sbjct: 868 KGVAHALSYLHHDCVPPIVHRDISSNNVLLDSKYEAHVSDFGTAKFLKLDSSNWSTLAGT 927

Query: 133 YGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDP 192
           YGY+A EL YT+KV +KC ++S G+LALEVM+G+HP   I S+ +S     +   ++LDP
Sbjct: 928 YGYVAPELAYTMKVTEKCDVYSFGVLALEVMRGRHPGDLISSLSASPGKDNVVLKDVLDP 987

Query: 193 RFQP 196
           R  P
Sbjct: 988 RLPP 991

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491509|ref|XP_002278522.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 70/101 (69%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
           SS N LLD +YEA   DFG AKF KLDSSN + LAGTYGY+A EL YT+KV +KC ++S 
Sbjct: 891 SSNNVLLDSKYEAHVSDFGTAKFLKLDSSNWSTLAGTYGYVAPELAYTMKVTEKCDVYSF 950

Query: 156 GLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQP 196
           G+LALEVM+G+HP   I S+  S     +   ++LDPR  P
Sbjct: 951 GVLALEVMRGRHPGDLISSLSDSPGKDNVVLKDVLDPRLPP 991

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738138|emb|CBI27339.3| unnamed protein product [Vitis vinifera]

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 70/102 (68%), Gaps = 1/102 (0%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
           SS N LLD E+ A   DFG A+    DSSN+T LAGTYGY+A EL YT+ V +KC ++S 
Sbjct: 417 SSGNILLDSEFRAVVSDFGTARLLDPDSSNQTLLAGTYGYVAPELAYTMVVTEKCDVYSF 476

Query: 156 GLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPH 197
           G+L LE+M GKHPR  + +I S+SS+  I   +ILDPR  PH
Sbjct: 477 GVLTLEIMMGKHPRELV-TILSTSSSQNIMLVDILDPRLAPH 517

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466223|ref|XP_002267065.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera] gi|147859823|emb|CAN79273.1| hypothetical protein VITISV_014885 [Vitis vinifera]

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 70/102 (68%), Gaps = 1/102 (0%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
           SS N LLD E+ A   DFG A+    DSSN+T LAGTYGY+A EL YT+ V +KC ++S 
Sbjct: 576 SSGNILLDSEFRAVVSDFGTARLLDPDSSNQTLLAGTYGYVAPELAYTMVVTEKCDVYSF 635

Query: 156 GLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPH 197
           G+L LE+M GKHPR  + +I S+SS+  I   +ILDPR  PH
Sbjct: 636 GVLTLEIMMGKHPRELV-TILSTSSSQNIMLVDILDPRLAPH 676

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734328|emb|CBI15575.3| unnamed protein product [Vitis vinifera]

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 93/183 (50%), Gaps = 34/183 (18%)

Query: 1    MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCG----------------DIRG 44
            M  LS IDISYN LQGPIP+S  FRDA ++ L+GNK LCG                D++ 
Sbjct: 1945 MRGLSDIDISYNQLQGPIPNSKAFRDATIELLKGNKDLCGNGHKIVTKRTPEIEEGDVQN 2004

Query: 45   FP-SCKVFNSR-----IDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFT---- 94
             P S   F+ R     I + T +FD      +       K R  ++ L+   +S+     
Sbjct: 2005 DPFSISTFDGRAMYEEIIKATKDFDPMDFFNEVRALTEIKHRNIVKLLVAHALSYMHHDC 2064

Query: 95   --------TSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV 146
                     SS N LLD +YE    DFG AK  KLDSSN++ LAGT+GY+A E  YT+ V
Sbjct: 2065 SPPIVHWDISSNNILLDSQYEPHISDFGTAKLLKLDSSNQSALAGTFGYVAPEHAYTMTV 2124

Query: 147  AKK 149
             +K
Sbjct: 2125 TEK 2127

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734327|emb|CBI15574.3| unnamed protein product [Vitis vinifera]

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 54/102 (52%), Positives = 69/102 (67%)

Query: 95  TSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHS 154
            SS N LLD +YEA   DFG AK  KLDSSN++ LAGT+GY+A EL YT+KV +K  + S
Sbjct: 480 VSSNNILLDSQYEAHISDFGTAKLLKLDSSNQSILAGTFGYLAPELAYTMKVTEKTDVFS 539

Query: 155 SGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQP 196
            G++ALEV+KG+HP   I S+  S     IA  ++LDPR  P
Sbjct: 540 FGVIALEVIKGRHPGDQILSLSVSPEKDNIALEDMLDPRLPP 581

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147772402|emb|CAN73988.1| hypothetical protein VITISV_022117 [Vitis vinifera]

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 69/101 (68%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
           SS N LLD +YEA   DFG AK  KLDSSN++ LAGT+GY+A EL YT+KV +K  + S 
Sbjct: 855 SSNNILLDSQYEAHISDFGTAKLLKLDSSNQSILAGTFGYLAPELAYTMKVTEKTDVFSF 914

Query: 156 GLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQP 196
           G++ALEV+KG+HP   I S+  S     IA  ++LDPR  P
Sbjct: 915 GVIALEVIKGRHPGDQILSLSVSPEKDNIALEDMLDPRLPP 955

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456159|ref|XP_002278561.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/102 (52%), Positives = 69/102 (67%)

Query: 95  TSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHS 154
            SS N LLD +YEA   DFG AK  KLDSSN++ LAGT+GY+A EL YT+KV +K  + S
Sbjct: 896 VSSNNILLDSQYEAHISDFGTAKLLKLDSSNQSILAGTFGYLAPELAYTMKVTEKTDVFS 955

Query: 155 SGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQP 196
            G++ALEV+KG+HP   I S+  S     IA  ++LDPR  P
Sbjct: 956 FGVIALEVIKGRHPGDQILSLSVSPEKDNIALEDMLDPRLPP 997

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087789|emb|CBI35045.3| unnamed protein product [Vitis vinifera]

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 108/245 (44%), Gaps = 59/245 (24%)

Query: 4   LSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFD 63
           L  +D+S N++ G IP       +  +  +G+     D  G     +    I + T NFD
Sbjct: 293 LVDLDLSSNSISGKIPSQIQNLKSAAETRRGDLFSVWDYDG----TIAYQDIIQSTENFD 348

Query: 64  DEHCIGKDGQGVVTK------------------------------------------LRY 81
            ++C+G  G G V +                                          +R 
Sbjct: 349 IKYCVGVGGYGSVYRAQLPCGKVVALKKLHGWEREEPTYLKSFENEAQILSKIRHRNIRL 408

Query: 82  HLEKLLRQEISFT------------TSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTEL 129
           ++ K +   +S+              SS N LL+ + EA   DFG A+    DSS +T L
Sbjct: 409 NVVKSIAHALSYMHHDCSPPIIHRDISSNNVLLNSQLEAFVSDFGTARLLDPDSSIQTLL 468

Query: 130 AGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEI 189
            GTYGYIA EL YT+ V KKC ++S G++ALE M GKHPR  I S+ SSS   ++   ++
Sbjct: 469 VGTYGYIAPELAYTMTVTKKCDVYSFGVVALETMMGKHPREVITSLSSSSGQDILL-RDV 527

Query: 190 LDPRF 194
           LDPR 
Sbjct: 528 LDPRL 532

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491512|ref|XP_002278614.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 66/101 (65%)

Query: 96   SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
            SS N LLD +YE    DFG AK  KLDSSN++ LAGT+GY+A E  YT+KV +K  ++S 
Sbjct: 904  SSNNILLDSQYEPHISDFGTAKLLKLDSSNQSALAGTFGYVAPEHAYTMKVTEKTDVYSF 963

Query: 156  GLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQP 196
            G++ LEV+KG+HP   I S+  S     I   ++LDPR  P
Sbjct: 964  GVITLEVIKGRHPGDQILSLSVSPEKENIVLEDMLDPRLPP 1004

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
TAIR|locus:2138268	1045	AT4G08850 [Arabidopsis thalian	0.350	0.069	0.575	3.8e-31
TAIR|locus:2011339	1120	AT1G35710 [Arabidopsis thalian	0.461	0.085	0.468	5.9e-26
TAIR|locus:2169965	1003	BAM1 "BARELY ANY MERISTEM 1" [	0.346	0.071	0.445	1.8e-17
TAIR|locus:2160791	1102	AT5G63930 [Arabidopsis thalian	0.346	0.065	0.452	5e-17
TAIR|locus:2046525	1124	AT2G33170 [Arabidopsis thalian	0.346	0.064	0.452	5.3e-17
TAIR|locus:2161158	1041	PXY "PHLOEM INTERCALATED WITH	0.322	0.064	0.5	1e-16
TAIR|locus:2020417	1101	AT1G17230 [Arabidopsis thalian	0.346	0.065	0.465	1.6e-16
UNIPROTKB|Q5Z9N5	994	P0481E08.42 "Os06g0717200 prot	0.346	0.072	0.452	1.8e-16
TAIR|locus:2025545	1029	AT1G08590 [Arabidopsis thalian	0.456	0.092	0.410	2.1e-16
TAIR|locus:2097310	1002	BAM2 "BARELY ANY MERISTEM 2" [	0.346	0.071	0.459	2.7e-15

TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
 Identities = 42/73 (57%), Positives = 54/73 (73%)

Query:    96 SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
             SS N LL  +YEA+  DFG AK  K DSSN + +AGTYGY+A EL Y +KV +KC ++S 
Sbjct:   907 SSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSF 966

Query:   156 GLLALEVMKGKHP 168
             G+L LEV+KG+HP
Sbjct:   967 GVLTLEVIKGEHP 979

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2011339 AT1G35710 [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
 Identities = 45/96 (46%), Positives = 60/96 (62%)

Query:    73 QGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGT 132
             +GV   L Y     +   +    SS N LLD +Y A+  DFG AK  K DSSN + +AGT
Sbjct:   960 KGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVAGT 1019

Query:   133 YGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
             YGY+A E  YT+KV +KC ++S G+L LE++ GKHP
Sbjct:  1020 YGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHP 1055

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

TAIR|locus:2169965 BAM1 "BARELY ANY MERISTEM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
 Identities = 33/74 (44%), Positives = 49/74 (66%)

Query:    97 SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHS 154
             S N LLD  +EA   DFG+AKF +   ++   + +AG+YGYIA E  YTLKV +K  ++S
Sbjct:   823 SNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYS 882

Query:   155 SGLLALEVMKGKHP 168
              G++ LE++ G+ P
Sbjct:   883 FGVVLLELVTGRKP 896

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010075 "regulation of meristem growth" evidence=IGI;RCA

GO:0048229 "gametophyte development" evidence=IGI

GO:0048437 "floral organ development" evidence=IGI

GO:0010480 "microsporocyte differentiation" evidence=IGI

GO:0048653 "anther development" evidence=IGI;RCA

GO:0009934 "regulation of meristem structural organization" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0033612 "receptor serine/threonine kinase binding" evidence=IPI

GO:0043621 "protein self-association" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 5.0e-17, Sum P(3) = 5.0e-17
 Identities = 33/73 (45%), Positives = 49/73 (67%)

Query:    97 SKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
             S N LLD ++EA   DFG+AK   +  S + + +AG+YGYIA E  YT+KV +K  ++S 
Sbjct:   935 SNNILLDDKFEAHVGDFGLAKVIDMPHSKSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSY 994

Query:   156 GLLALEVMKGKHP 168
             G++ LE++ GK P
Sbjct:   995 GVVLLELLTGKAP 1007

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
 Identities = 33/73 (45%), Positives = 49/73 (67%)

Query:    97 SKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
             S N L+D  +EA   DFG+AK   +  S + + +AG+YGYIA E  YT+KV +KC ++S 
Sbjct:   955 SNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSF 1014

Query:   156 GLLALEVMKGKHP 168
             G++ LE++ GK P
Sbjct:  1015 GVVLLELLTGKAP 1027

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006486 "protein glycosylation" evidence=RCA

TAIR|locus:2161158 PXY "PHLOEM INTERCALATED WITH XYLEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
 Identities = 34/68 (50%), Positives = 48/68 (70%)

Query:    99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
             N LLD ++EAR  DFG+AK  + D S  + +AG+YGYIA E  YTL+V KK  ++S G++
Sbjct:   857 NILLDADFEARVADFGVAKLIQTDES-MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVI 915

Query:   159 ALEVMKGK 166
              LE++ GK
Sbjct:   916 LLEIITGK 923

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010067 "procambium histogenesis" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010089 "xylem development" evidence=IMP

GO:0010223 "secondary shoot formation" evidence=IMP

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

TAIR|locus:2020417 AT1G17230 [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
 Identities = 34/73 (46%), Positives = 49/73 (67%)

Query:    97 SKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
             S N LLD  ++A   DFG+AK   L  S + + +AG+YGYIA E  YT+KV +KC ++S 
Sbjct:   929 SNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSF 988

Query:   156 GLLALEVMKGKHP 168
             G++ LE++ GK P
Sbjct:   989 GVVLLELITGKPP 1001

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

UNIPROTKB|Q5Z9N5 P0481E08.42 "Os06g0717200 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 152 (58.6 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
 Identities = 33/73 (45%), Positives = 48/73 (65%)

Query:    97 SKNGLLDLEYEARAFDFGIAKFFKLDSSN-RTELAGTYGYIALELTYTLKVAKKCGMHSS 155
             S N LLD  +EA   DFG+AKF    +S   + +AG+YGYIA E  YTL+V +K  ++S 
Sbjct:   831 SNNILLDSAFEAHVADFGLAKFLGGATSECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSF 890

Query:   156 GLLALEVMKGKHP 168
             G++ LE++ G+ P
Sbjct:   891 GVVLLELITGRRP 903

GO:0010080 "regulation of floral meristem growth" evidence=IMP

GO:0048833 "specification of floral organ number" evidence=IMP

TAIR|locus:2025545 AT1G08590 [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
 Identities = 39/95 (41%), Positives = 52/95 (54%)

Query:    74 GVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTY 133
             GVV  L Y         I     S N LLD   EAR  DFG+AK     +   + +AG+Y
Sbjct:   834 GVVQGLNYLHNDCYPPIIHRDIKSNNILLDSNLEARIADFGLAKMMLHKNETVSMVAGSY 893

Query:   134 GYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
             GYIA E  YTLK+ +K  ++S G++ LE++ GK P
Sbjct:   894 GYIAPEYGYTLKIDEKSDIYSLGVVLLELVTGKMP 928

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010067 "procambium histogenesis" evidence=ISS

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2097310 BAM2 "BARELY ANY MERISTEM 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 34/74 (45%), Positives = 49/74 (66%)

Query:    97 SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHS 154
             S N LLD  +EA   DFG+AKF +   ++   + +AG+YGYIA E  YTLKV +K  ++S
Sbjct:   819 SNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYS 878

Query:   155 SGLLALEVMKGKHP 168
              G++ LE++ GK P
Sbjct:   879 FGVVLLELITGKKP 892

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010075 "regulation of meristem growth" evidence=IGI;RCA

GO:0048229 "gametophyte development" evidence=IGI

GO:0048437 "floral organ development" evidence=IGI

GO:0010480 "microsporocyte differentiation" evidence=IGI

GO:0048653 "anther development" evidence=IGI;RCA

GO:0009934 "regulation of meristem structural organization" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0033612 "receptor serine/threonine kinase binding" evidence=IPI

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00017827001 SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (800 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	208
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.003
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.004

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALEL-----TYTLKVAKKCG 151
            +N LLD     +  DFG+AK     SS+ T   GT  Y+A E+      Y  KV     
Sbjct: 126 PENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVD---- 181

Query: 152 MHSSGLLALEVMKGKHP 168
           + S G++  E++ GK P
Sbjct: 182 VWSLGVILYELLTGKPP 198

Length = 260

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 4/102 (3%)

Query: 99  NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
           N LLD +      DF IA       +  T  +GT GY+A E+      +      S G+ 
Sbjct: 130 NILLDEQGHVHITDFNIATKVT-PDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVT 188

Query: 159 ALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTM 200
           A E ++GK P         +  + + A  E  D  +    + 
Sbjct: 189 AYECLRGKRPYRG---HSRTIRDQIRAKQETADVLYPATWST 227

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 53  SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
           S  D VT    DE  I    +  +  L + H  +++ ++I     S N LL ++   +  
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK----SDNILLGMDGSVKLT 158

Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
           DFG       + S R+ + GT  ++A E+        K  + S G++A+E+++G+ P
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 53  SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
           S  D VT    DE  I    +  +  L + H  +++ ++I     S N LL ++   +  
Sbjct: 102 SLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIK----SDNVLLGMDGSVKLT 157

Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
           DFG       + S R+ + GT  ++A E+        K  + S G++A+E+++G+ P
Sbjct: 158 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 37.4 bits (86), Expect = 0.003
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 53  SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
           S  D VT    DE  I    +  +  L + H  +++ ++I     S N LL ++   +  
Sbjct: 102 SLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIK----SDNILLGMDGSVKLT 157

Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
           DFG       + S R+ + GT  ++A E+        K  + S G++A+E+++G+ P
Sbjct: 158 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 14/112 (12%)

Query: 64  DEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD 122
            E  I    + ++  L Y H   ++ ++I     + N LL  + E +  DFG++     D
Sbjct: 96  TESQIAYVCKELLKGLEYLHSNGIIHRDIK----AANILLTSDGEVKLIDFGLSAQLS-D 150

Query: 123 SSNRTELAGTYGYIALEL----TYTLKVAKKCGMHSSGLLALEVMKGKHPRH 170
           +  R  + GT  ++A E+     Y      K  + S G+ A+E+ +GK P  
Sbjct: 151 TKARNTMVGTPYWMAPEVINGKPYDY----KADIWSLGITAIELAEGKPPYS 198

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.95
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.95
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.94
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.93
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.92
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.92
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.92
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.92
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.91
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.91
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.91
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.9
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.9
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.9
KOG0605	550	consensus NDR and related serine/threonine kinases	99.9
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.9
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.9
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.89
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.89
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.89
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.88
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.88
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.88
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.88
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.88
PTZ00283	496	serine/threonine protein kinase; Provisional	99.88
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.88
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.87
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.87
KOG0198	313	consensus MEKK and related serine/threonine protei	99.87
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.87
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.87
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.87
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.87
PHA02882	294	putative serine/threonine kinase; Provisional	99.87
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.87
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.87
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.87
KOG0578	550	consensus p21-activated serine/threonine protein k	99.87
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.87
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.86
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.86
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.86
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.86
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.86
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.86
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.86
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.86
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.86
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.86
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.86
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.86
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.86
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.86
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.86
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.86
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.86
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.86
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.86
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.86
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.86
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.86
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.86
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.86
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.85
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.85
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.85
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.85
PHA03212	391	serine/threonine kinase US3; Provisional	99.85
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.85
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.85
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.85
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.85
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.85
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.85
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.85
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.85
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.85
PTZ00284	467	protein kinase; Provisional	99.85
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.85
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.85
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.85
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.85
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.85
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.85
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.85
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.85
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.84
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.84
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.84
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.84
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.84
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.84
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.84
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.83
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.83
PTZ00267	478	NIMA-related protein kinase; Provisional	99.83
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.83
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.83
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.83
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.83
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.83
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.83
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.83
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.83
PHA03210	501	serine/threonine kinase US3; Provisional	99.83
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.83
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.83
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.83
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.83
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.83
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.83
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.82
PTZ00036	440	glycogen synthase kinase; Provisional	99.82
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.82
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.82
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.82
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.82
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.82
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.82
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.82
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.82
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.82
PHA03207	392	serine/threonine kinase US3; Provisional	99.82
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.82
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.82
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.82
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.82
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.82
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.82
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.82
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.82
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.82
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.82
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.82
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.82
PHA03211	461	serine/threonine kinase US3; Provisional	99.82
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.82
PHA02988	283	hypothetical protein; Provisional	99.81
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.81
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.81
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.81
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.81
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.81
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.81
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.81
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.81
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.81
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.81
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.81
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.81
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.81
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.81
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.81
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.81
KOG0589	426	consensus Serine/threonine protein kinase [General	99.81
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.81
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.81
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.81
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.81
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.81
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.81
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.81
PHA03209	357	serine/threonine kinase US3; Provisional	99.81
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.81
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.81
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.81
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.81
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.81
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.8
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.8
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.8
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.8
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.8
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.8
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.8
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.8
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.8
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.8
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.8
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.8
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.8
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.8
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.8
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.8
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.8
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.8
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.8
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.8
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.8
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.79
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.79
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.79
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.79
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.79
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.79
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.79
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.79
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.79
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.79
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.79
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.79
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.79
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.79
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.79
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.79
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.79
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.79
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.79
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.79
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.79
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.79
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.79
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.79
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.79
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.79
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.79
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.79
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.79
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.79
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.79
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.79
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.78
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.78
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.78
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.78
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.78
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.78
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.78
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.78
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.78
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.78
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.78
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.78
KOG3653	534	consensus Transforming growth factor beta/activin	99.78
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.78
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.78
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.78
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.78
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.78
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.77
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.77
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.77
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.77
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.77
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.77
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.77
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.77
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.77
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.77
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.77
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.77
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.77
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.77
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.77
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.77
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.77
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.77
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.77
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.77
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.77
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.77
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.77
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.77
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.77
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.77
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.77
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.77
KOG0584	632	consensus Serine/threonine protein kinase [General	99.77
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.76
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.76
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.76
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.76
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.76
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.76
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.76
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.76
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.76
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.76
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.76
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.76
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.76
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.76
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.76
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.76
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.76
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.76
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.76
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.76
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.76
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.75
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.75
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.75
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.75
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.75
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.75
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.75
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.75
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.75
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.75
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.75
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.75
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.75
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.75
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.75
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.75
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.75
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.75
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.75
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.74
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.74
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.74
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.74
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.74
PLN00009	294	cyclin-dependent kinase A; Provisional	99.74
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.74
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.74
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.74
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.74
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.74
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.74
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.74
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.74
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.74
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.74
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.74
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.74
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.73
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.73
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.73
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.73
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.73
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.73
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.73
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.72
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.72
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.72
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.72
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.72
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.71
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.71
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.71
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.71
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.71
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.71
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.71
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.71
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.71
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.71
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.71
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.71
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.71
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.71
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.71
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.71
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.7
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.7
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.7
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.7
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.7
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.7
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.7
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.7
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.7
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.7
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.7
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.69
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.69
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.69
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.68
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.68
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.67
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.67
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.67
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.67
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.67
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.67
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.66
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.66
KOG0610	459	consensus Putative serine/threonine protein kinase	99.65
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.65
KOG0586	596	consensus Serine/threonine protein kinase [General	99.65
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.64
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.63
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.63
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.6
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.6
PLN00181	793	protein SPA1-RELATED; Provisional	99.59
KOG1152	772	consensus Signal transduction serine/threonine kin	99.59
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.58
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.57
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.55
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.54
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.53
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.53
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.52
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.51
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.51
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.5
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.47
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.45
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.33
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.32
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.28
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.28
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.18
PRK09188	365	serine/threonine protein kinase; Provisional	99.16
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.14
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.09
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.06
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.06
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.05
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.03
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.01
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.93
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.9
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.87
PRK12274	218	serine/threonine protein kinase; Provisional	98.73
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.66
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.65
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.46
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.38
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.31
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.27
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.27
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.19
PRK10345	210	hypothetical protein; Provisional	98.1
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.9
PRK14879	211	serine/threonine protein kinase; Provisional	97.9
smart00090	237	RIO RIO-like kinase.	97.87
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.83
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.72
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.64
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.44
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.38
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.22
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.13
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.94
KOG1290	590	consensus Serine/threonine protein kinase [Signal	96.83
COG4248	637	Uncharacterized protein with protein kinase and he	96.65
PF00560	22	LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le	96.47
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.43
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	96.19
PLN03150	623	hypothetical protein; Provisional	96.12
KOG3087	229	consensus Serine/threonine protein kinase [General	95.83
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.64
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	95.19
PF13504	17	LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OO	94.97
KOG1266	458	consensus Protein kinase [Signal transduction mech	94.75
PF13516	24	LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RI	94.19
PF12799	44	LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_	94.14
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	94.14
KOG1243	690	consensus Protein kinase [General function predict	94.09
COG0478	304	RIO-like serine/threonine protein kinase fused to	93.13
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	92.31
smart00370	26	LRR Leucine-rich repeats, outliers.	91.93
smart00369	26	LRR_TYP Leucine-rich repeats, typical (most popula	91.93
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	91.29
smart00364	26	LRR_BAC Leucine-rich repeats, bacterial type.	91.29
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	91.25
PF13855	61	LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF	91.23
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	91.1
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	90.92
PLN03150	623	hypothetical protein; Provisional	89.73
COG0661	517	AarF Predicted unusual protein kinase [General fun	89.61
smart00368	28	LRR_RI Leucine rich repeat, ribonuclease inhibitor	89.4
smart00365	26	LRR_SD22 Leucine-rich repeat, SDS22-like subfamily	88.75
PF01636	239	APH: Phosphotransferase enzyme family This family	86.99
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	86.9
PF12799	44	LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_	86.61
PRK10271	188	thiK thiamine kinase; Provisional	86.58
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	86.21
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	85.88
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	85.81
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	85.79
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	84.81
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	83.98
PRK05231	319	homoserine kinase; Provisional	83.9
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	83.83
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	83.27
PF13855	61	LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF	83.05
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	81.03

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-35  Score=245.18  Aligned_cols=156  Identities=31%  Similarity=0.449  Sum_probs=134.1

Q ss_pred             hHHHHHhhcCCCCCceeccCCCceEEehhhh-------------------------------------------------
Q 039937           52 NSRIDRVTNNFDDEHCIGKDGQGVVTKLRYH-------------------------------------------------   82 (208)
Q Consensus        52 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-------------------------------------------------   82 (208)
                      +++|++||++|+..++||+|+||.||+|.+.                                                 
T Consensus        67 ~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~  146 (361)
T KOG1187|consen   67 YDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEH  146 (361)
T ss_pred             HHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCce
Confidence            8999999999999999999999999999887                                                 


Q ss_pred             ------------hHH---------------------------Hhhhh-----hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           83 ------------LEK---------------------------LLRQE-----ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        83 ------------L~~---------------------------~Lh~~-----iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                                  |.+                           |||..     |||||||+|||||+++.+||+|||+++.
T Consensus       147 ~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~  226 (361)
T KOG1187|consen  147 RLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKL  226 (361)
T ss_pred             EEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence                        434                           44443     9999999999999999999999999977


Q ss_pred             ecC-CCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC--------cccHHHHHHhhcCCCCCCccc
Q 039937          119 FKL-DSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP--------RHFIFSICSSSSNFVIAPHEI  189 (208)
Q Consensus       119 ~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p--------~~~l~~~~~~~~~~~~~~~~~  189 (208)
                      ... .........||.+|++||++..+.++.|+|||||||+++|++||++|        ...+.+|++..+.+++ +.++
T Consensus       227 ~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~-~~ei  305 (361)
T KOG1187|consen  227 GPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGK-LREI  305 (361)
T ss_pred             CCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcc-hhhe
Confidence            664 32222211799999999999999999999999999999999999987        2359999999998886 9999


Q ss_pred             cCCCCC-c---------hHHHHhccccCC
Q 039937          190 LDPRFQ-P---------HHTMFGVNCYQS  208 (208)
Q Consensus       190 ~D~~l~-~---------~~~~~~~~C~q~  208 (208)
                      +|+++. .         .+..+|++|++.
T Consensus       306 iD~~l~~~~~~~~~~~~~~~~~a~~C~~~  334 (361)
T KOG1187|consen  306 VDPRLKEGEYPDEKEVKKLAELALRCLRP  334 (361)
T ss_pred             eCCCccCCCCChHHHHHHHHHHHHHHcCc
Confidence            999986 2         477899999873

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.95  E-value=2.6e-28  Score=199.31  Aligned_cols=101  Identities=24%  Similarity=0.220  Sum_probs=87.3

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..+|||+.  |||||||+|||||..|+++|+|||+++..-.......+.+||+.|||||.+....++..+|.||+|+++|
T Consensus       137 AL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillY  216 (357)
T KOG0598|consen  137 ALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLY  216 (357)
T ss_pred             HHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHH
Confidence            34566666  9999999999999999999999999997666555556789999999999999999999999999999999


Q ss_pred             HHHcCCCC--cccHHHHHHhhcCCC
Q 039937          161 EVMKGKHP--RHFIFSICSSSSNFV  183 (208)
Q Consensus       161 elltg~~p--~~~l~~~~~~~~~~~  183 (208)
                      ||++|.+|  ..+...+.+...+++
T Consensus       217 eML~G~pPF~~~~~~~~~~~I~~~k  241 (357)
T KOG0598|consen  217 EMLTGKPPFYAEDVKKMYDKILKGK  241 (357)
T ss_pred             HHhhCCCCCcCccHHHHHHHHhcCc
Confidence            99999999  556667776666655

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.95  E-value=3.4e-27  Score=221.52  Aligned_cols=201  Identities=22%  Similarity=0.350  Sum_probs=151.5

Q ss_pred             CCCCCEEecccCCCcccCCCCcccCcCCcccccCCCCcCCCcC--CCCCcch---------------------------h
Q 039937            1 MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIR--GFPSCKV---------------------------F   51 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l~~~~~--~~~~c~~---------------------------~   51 (208)
                      +++|++||+|+|+++|.+|+...+..+...++.||+.+|+..+  ..++|..                           +
T Consensus       570 l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (968)
T PLN00113        570 VESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGF  649 (968)
T ss_pred             CcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHH
Confidence            3578999999999999999988888888899999999998653  4566732                           0


Q ss_pred             --hH------------------------------HHHHhhcCCCCCceeccCCCceEEehhhh-----------------
Q 039937           52 --NS------------------------------RIDRVTNNFDDEHCIGKDGQGVVTKLRYH-----------------   82 (208)
Q Consensus        52 --~~------------------------------~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-----------------   82 (208)
                        +.                              ........|...+.||+|+||.||+|...                 
T Consensus       650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~  729 (968)
T PLN00113        650 VFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI  729 (968)
T ss_pred             HHHHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc
Confidence              00                              11122345667789999999999999853                 


Q ss_pred             --------------------------------------------------------------hHHHhhhh-----hhcCc
Q 039937           83 --------------------------------------------------------------LEKLLRQE-----ISFTT   95 (208)
Q Consensus        83 --------------------------------------------------------------L~~~Lh~~-----iH~dl   95 (208)
                                                                                    ..+|+|..     +|||+
T Consensus       730 ~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dl  809 (968)
T PLN00113        730 PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNL  809 (968)
T ss_pred             cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCC
Confidence                                                                          23455521     99999


Q ss_pred             CCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC-------
Q 039937           96 SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP-------  168 (208)
Q Consensus        96 k~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p-------  168 (208)
                      ||+||+++.++.+++. ++........    ....++..|+|||++....++.++|||||||++||++||+.|       
T Consensus       810 kp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~  884 (968)
T PLN00113        810 SPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV  884 (968)
T ss_pred             CHHhEEECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC
Confidence            9999999999988875 5544332211    123578899999999988899999999999999999999999       


Q ss_pred             cccHHHHHHhhcCCCCCCccccCCCCCc----------hHHHHhccccC
Q 039937          169 RHFIFSICSSSSNFVIAPHEILDPRFQP----------HHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~l~~~~~~~~~~~~~~~~~~D~~l~~----------~~~~~~~~C~q  207 (208)
                      ...+.+|++....... ..+.+|+.+..          ++.+++.+|++
T Consensus       885 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~  932 (968)
T PLN00113        885 HGSIVEWARYCYSDCH-LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTA  932 (968)
T ss_pred             CCcHHHHHHHhcCccc-hhheeCccccCCCCccHHHHHHHHHHHHhhCc
Confidence            3367888877665554 56666776633          46678889986

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=1.1e-27  Score=189.96  Aligned_cols=88  Identities=22%  Similarity=0.267  Sum_probs=78.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC--
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP--  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p--  168 (208)
                      +||||||.||+|+.+|.+|+.|||++++....+.......||+.||+||.+....++.|+||||+||+++||..-++|  
T Consensus       150 mHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~  229 (375)
T KOG0591|consen  150 MHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFY  229 (375)
T ss_pred             eeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcc
Confidence            999999999999999999999999999988776666678999999999999999999999999999999999999999  


Q ss_pred             cccHHHHHHh
Q 039937          169 RHFIFSICSS  178 (208)
Q Consensus       169 ~~~l~~~~~~  178 (208)
                      +.++.+.-++
T Consensus       230 g~n~~~L~~K  239 (375)
T KOG0591|consen  230 GDNLLSLCKK  239 (375)
T ss_pred             cccHHHHHHH
Confidence            4455554433

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.93  E-value=6.8e-27  Score=193.06  Aligned_cols=77  Identities=27%  Similarity=0.377  Sum_probs=70.1

Q ss_pred             hhcCcCCCceeeCCC------CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLE------YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~------~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      |||||||.||||+..      -.+||+|||+++...+. ....+.+|++.|||||.+...+|+.|+|+||.|+++|++++
T Consensus       131 iHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~  209 (429)
T KOG0595|consen  131 IHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLT  209 (429)
T ss_pred             eeccCCcceEEeccCCCCCCCceEEecccchhhhCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHh
Confidence            999999999999765      56899999999988754 34456899999999999999999999999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       210 g~~P  213 (429)
T KOG0595|consen  210 GKPP  213 (429)
T ss_pred             CCCC
Confidence            9999

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.92  E-value=5.3e-26  Score=185.92  Aligned_cols=83  Identities=25%  Similarity=0.325  Sum_probs=74.3

Q ss_pred             HHHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           84 EKLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..|||+.   |||||||+|||++..+++||+|||.++.+.+.  ......||..|||||.+.+..++.++||||||+.++
T Consensus       191 L~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsll  268 (364)
T KOG0581|consen  191 LSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLL  268 (364)
T ss_pred             HHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--hcccccccccccChhhhcCCcCCcccceecccHHHH
Confidence            3466642   99999999999999999999999999877654  445678999999999999999999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      |+.+|+-|
T Consensus       269 E~a~GrfP  276 (364)
T KOG0581|consen  269 ELAIGRFP  276 (364)
T ss_pred             HHhhCCCC
Confidence            99999988

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.92  E-value=8.5e-26  Score=193.17  Aligned_cols=99  Identities=23%  Similarity=0.250  Sum_probs=89.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||++  +|||+||.|||++..+.+|++|||+++.+..++...+.+.||+.|||||......++..+|+||+||++||+
T Consensus       114 ~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~  193 (808)
T KOG0597|consen  114 YYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYEL  193 (808)
T ss_pred             HHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHH
Confidence            455555  999999999999999999999999999999888888888999999999999999999999999999999999


Q ss_pred             HcCCCC--cccHHHHHHhhcCCC
Q 039937          163 MKGKHP--RHFIFSICSSSSNFV  183 (208)
Q Consensus       163 ltg~~p--~~~l~~~~~~~~~~~  183 (208)
                      .+|++|  ...+.+.++....+.
T Consensus       194 ~~G~PPF~a~si~~Lv~~I~~d~  216 (808)
T KOG0597|consen  194 YVGQPPFYARSITQLVKSILKDP  216 (808)
T ss_pred             hcCCCCchHHHHHHHHHHHhcCC
Confidence            999999  556777777777665

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2e-25  Score=185.77  Aligned_cols=91  Identities=25%  Similarity=0.286  Sum_probs=79.6

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..+|+|..  +|||||+.||++..+|.+|++|||++...+.......++.||+.|||||++....++.|+|+||+|++.+
T Consensus       123 ~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITai  202 (467)
T KOG0201|consen  123 GLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAI  202 (467)
T ss_pred             HhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHH
Confidence            34555555  9999999999999999999999999999887655557889999999999999888999999999999999


Q ss_pred             HHHcCCCCcccHH
Q 039937          161 EVMKGKHPRHFIF  173 (208)
Q Consensus       161 elltg~~p~~~l~  173 (208)
                      ||.+|.+|...++
T Consensus       203 Ela~GePP~s~~h  215 (467)
T KOG0201|consen  203 ELAKGEPPHSKLH  215 (467)
T ss_pred             HHhcCCCCCcccC
Confidence            9999999944333

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.92  E-value=7.5e-25  Score=184.38  Aligned_cols=115  Identities=23%  Similarity=0.301  Sum_probs=84.9

Q ss_pred             hhcCcCCCceeeCCCC-cEEEcccceeeeecCCCCCccccccccccccccccc--cCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY--TLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      |||||||.|||++.++ ++||+|||+++.........+...||..|||||.+.  ...++.|+||||||+++||++||+.
T Consensus       165 IHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~  244 (362)
T KOG0192|consen  165 IHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI  244 (362)
T ss_pred             eecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC
Confidence            9999999999999997 999999999988765322333468999999999999  6689999999999999999999999


Q ss_pred             CcccH--HHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRHFI--FSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~~l--~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..++  .+.+.......  ....+..........+..+|++
T Consensus       245 Pf~~~~~~~~~~~v~~~~--~Rp~~p~~~~~~l~~l~~~CW~  284 (362)
T KOG0192|consen  245 PFEDLAPVQVASAVVVGG--LRPPIPKECPPHLSSLMERCWL  284 (362)
T ss_pred             CCCCCCHHHHHHHHHhcC--CCCCCCccCCHHHHHHHHHhCC
Confidence            93332  23333333222  2222333344555666666764

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.91  E-value=5.5e-25  Score=187.21  Aligned_cols=86  Identities=23%  Similarity=0.359  Sum_probs=75.5

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-----------CC--ccccccccccccccccccCCcC
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-----------SN--RTELAGTYGYIALELTYTLKVA  147 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-----------~~--~~~~~g~~~y~aPE~~~~~~~~  147 (208)
                      -.+|||++  |||||||+|||||.+++.||.|||-++.+.+..           ..  ...+.||..|++||.+.....+
T Consensus       186 AleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~  265 (604)
T KOG0592|consen  186 ALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAG  265 (604)
T ss_pred             HHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCC
Confidence            45677766  999999999999999999999999999876531           11  1447899999999999999999


Q ss_pred             cccchHHHHHHHHHHHcCCCC
Q 039937          148 KKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       148 ~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ..+|+|+|||++|+|+.|++|
T Consensus       266 ~~sDiWAlGCilyQmlaG~PP  286 (604)
T KOG0592|consen  266 PSSDLWALGCILYQMLAGQPP  286 (604)
T ss_pred             cccchHHHHHHHHHHhcCCCC
Confidence            999999999999999999999

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.91  E-value=1.5e-24  Score=173.10  Aligned_cols=83  Identities=28%  Similarity=0.284  Sum_probs=75.3

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..+|||+.  ++||+||+|||||.+|..||.|||+++.....   ..+++||+.|+|||.+....++..+|.|||||++|
T Consensus       156 AleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIY  232 (355)
T KOG0616|consen  156 ALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIY  232 (355)
T ss_pred             HHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHH
Confidence            34566655  99999999999999999999999999987643   45789999999999999999999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+.|.+|
T Consensus       233 EMlaG~pP  240 (355)
T KOG0616|consen  233 EMLAGYPP  240 (355)
T ss_pred             HHHcCCCC
Confidence            99999999

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.91  E-value=5e-25  Score=176.45  Aligned_cols=78  Identities=23%  Similarity=0.253  Sum_probs=71.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      |||||||+|||++.++.+|++|||+|+.+.......+.-..|.+|.|||.+.+ .+++...||||.||++.||++|++-
T Consensus       123 IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL  201 (396)
T KOG0593|consen  123 IHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPL  201 (396)
T ss_pred             ecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcC
Confidence            99999999999999999999999999988766566667788999999999885 7899999999999999999999974

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.4e-24  Score=187.53  Aligned_cols=86  Identities=23%  Similarity=0.276  Sum_probs=78.4

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..+|||++  |+||||..|||||.+|.+||+|||+++..-.......+++||+.|||||.+....|+...|.|||||++|
T Consensus       480 ~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLly  559 (694)
T KOG0694|consen  480 GLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLY  559 (694)
T ss_pred             HHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHH
Confidence            56788888  9999999999999999999999999997543344556789999999999999999999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+.|+.|
T Consensus       560 eML~Gq~P  567 (694)
T KOG0694|consen  560 EMLVGESP  567 (694)
T ss_pred             HHHcCCCC
Confidence            99999999

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.90  E-value=8.1e-25  Score=177.12  Aligned_cols=85  Identities=25%  Similarity=0.192  Sum_probs=75.4

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+|||++  +|||||++|+|+...|.+|++|||+|+.+.......+....|.+|.|||.+.+ ..+++..||||+||++.
T Consensus       190 lk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~a  269 (419)
T KOG0663|consen  190 LKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFA  269 (419)
T ss_pred             HHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHH
Confidence            4566666  99999999999999999999999999999877666777888999999998874 56899999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      |++++++-
T Consensus       270 E~l~~kPl  277 (419)
T KOG0663|consen  270 ELLTQKPL  277 (419)
T ss_pred             HHHhcCCC
Confidence            99998864

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=2.9e-24  Score=184.86  Aligned_cols=85  Identities=25%  Similarity=0.317  Sum_probs=77.8

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      ..|||+.  ||||||..|++|++++++||+|||+|.....+.....+++||+.|+|||++.....+..+||||+||++|.
T Consensus       131 lkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYt  210 (592)
T KOG0575|consen  131 LKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYT  210 (592)
T ss_pred             HHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHh
Confidence            3456655  99999999999999999999999999998877666778899999999999998888999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |+.|++|
T Consensus       211 LL~G~PP  217 (592)
T KOG0575|consen  211 LLVGRPP  217 (592)
T ss_pred             hhhCCCC
Confidence            9999999

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.90  E-value=4.3e-24  Score=181.57  Aligned_cols=78  Identities=27%  Similarity=0.338  Sum_probs=65.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecC----------------------CCCC-----c-----------------
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKL----------------------DSSN-----R-----------------  126 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~----------------------~~~~-----~-----------------  126 (208)
                      |||||||.|+|||..|++||+|||++.-...                      ....     .                 
T Consensus       263 IHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr  342 (550)
T KOG0605|consen  263 IHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRR  342 (550)
T ss_pred             ccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhh
Confidence            9999999999999999999999999853211                      0000     0                 


Q ss_pred             ---cccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          127 ---TELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       127 ---~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                         ....||+-|||||++.+..++...|.||+||+++|++.|-+|
T Consensus       343 ~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPP  387 (550)
T KOG0605|consen  343 QLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPP  387 (550)
T ss_pred             hhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCC
Confidence               113699999999999999999999999999999999999999

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=1.9e-24  Score=183.51  Aligned_cols=114  Identities=18%  Similarity=0.131  Sum_probs=80.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      |||||.+.|||++++..+||+|||+++...++. .......-...|.|||.+..++++.|||||||||+|+|++| |+.|
T Consensus       325 IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~p  404 (468)
T KOG0197|consen  325 IHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVP  404 (468)
T ss_pred             cchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCC
Confidence            999999999999999999999999999654431 11222233567999999999999999999999999999998 8888


Q ss_pred             --cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 --RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 --~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        .....+-++.. ..+.  ..--.+....++-++...|+.
T Consensus       405 y~~msn~ev~~~l-e~Gy--Rlp~P~~CP~~vY~lM~~CW~  442 (468)
T KOG0197|consen  405 YPGMSNEEVLELL-ERGY--RLPRPEGCPDEVYELMKSCWH  442 (468)
T ss_pred             CCCCCHHHHHHHH-hccC--cCCCCCCCCHHHHHHHHHHhh
Confidence              33333333332 2221  111122334466667666753

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.90  E-value=1.1e-23  Score=175.31  Aligned_cols=84  Identities=27%  Similarity=0.328  Sum_probs=71.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++||..  +||||||+|||++.++.+||+|||+++.............|++.|+|||.+....++.++|||||||+++||
T Consensus       115 ~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el  194 (323)
T cd05616         115 FFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM  194 (323)
T ss_pred             HHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHH
Confidence            344444  999999999999999999999999987654333233445789999999999988899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      +||+.|
T Consensus       195 ltg~~P  200 (323)
T cd05616         195 LAGQAP  200 (323)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.89  E-value=3.9e-24  Score=184.06  Aligned_cols=78  Identities=19%  Similarity=0.251  Sum_probs=66.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecC--CCCCccccccccccccccccc---cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKL--DSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~--~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      ||||||+.||+|.+++++||.|||++..-..  .........|..-|||||++.   ...++..+||||||+|+|||+||
T Consensus       510 IHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg  589 (678)
T KOG0193|consen  510 IHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTG  589 (678)
T ss_pred             hhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhC
Confidence            9999999999999999999999999864321  223334567888999999987   35689999999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      ..|
T Consensus       590 ~lP  592 (678)
T KOG0193|consen  590 ELP  592 (678)
T ss_pred             cCC
Confidence            999

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=3.7e-24  Score=180.91  Aligned_cols=85  Identities=22%  Similarity=0.236  Sum_probs=74.0

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccc-cCCcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl  159 (208)
                      .+|+|..  +|||||.+|||||.+|.+||+|||+++++... ....+....|.+|.|||.+. ...|+...|+||.|||+
T Consensus       231 l~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl  310 (560)
T KOG0600|consen  231 LEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCIL  310 (560)
T ss_pred             HHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHH
Confidence            3455555  99999999999999999999999999988766 33466677899999999877 46789999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      .||++|++.
T Consensus       311 ~El~~gkPI  319 (560)
T KOG0600|consen  311 AELFLGKPI  319 (560)
T ss_pred             HHHHcCCCC
Confidence            999999987

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.2e-23  Score=176.13  Aligned_cols=84  Identities=25%  Similarity=0.229  Sum_probs=75.0

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .++||..  +.||+||+|||||++|+++|+|+|++..+...... ....||.||||||++....++...|.||+||++||
T Consensus       300 LehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~-~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYe  378 (591)
T KOG0986|consen  300 LEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI-RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYE  378 (591)
T ss_pred             HHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcc-ccccCcccccCHHHHcCCcccCCccHHHHHhHHHH
Confidence            4556655  99999999999999999999999999988766433 33489999999999999999999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |+.|+.|
T Consensus       379 mi~G~sP  385 (591)
T KOG0986|consen  379 MIAGHSP  385 (591)
T ss_pred             HHcccCc
Confidence            9999999

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.88  E-value=7.3e-24  Score=181.60  Aligned_cols=85  Identities=25%  Similarity=0.316  Sum_probs=74.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      |||.+  ||||||+-|||+..+-.+||+|||.++..... .....+.||..|||||++....++.|.||||||||||||+
T Consensus       227 YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmL  305 (904)
T KOG4721|consen  227 YLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEML  305 (904)
T ss_pred             HHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHH
Confidence            44444  99999999999999999999999999877654 3344578999999999999999999999999999999999


Q ss_pred             cCCCCccc
Q 039937          164 KGKHPRHF  171 (208)
Q Consensus       164 tg~~p~~~  171 (208)
                      ||.-|..+
T Consensus       306 T~EiPYkd  313 (904)
T KOG4721|consen  306 TGEIPYKD  313 (904)
T ss_pred             hcCCCccc
Confidence            99999433

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.88  E-value=3.7e-23  Score=162.94  Aligned_cols=91  Identities=20%  Similarity=0.198  Sum_probs=74.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .|+|.+  +|||+||.|+|++.++.+|++|||+++...+.....+....|.+|.|||.+. ..+++...||||.||++.|
T Consensus       115 ~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AE  194 (318)
T KOG0659|consen  115 AYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAE  194 (318)
T ss_pred             HHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHH
Confidence            344444  9999999999999999999999999999887655555557899999999877 4578999999999999999


Q ss_pred             HHcCCCC---cccHHHH
Q 039937          162 VMKGKHP---RHFIFSI  175 (208)
Q Consensus       162 lltg~~p---~~~l~~~  175 (208)
                      |+-|.+-   ..++.|.
T Consensus       195 Lllr~P~fpG~sDidQL  211 (318)
T KOG0659|consen  195 LLLRVPFFPGDSDIDQL  211 (318)
T ss_pred             HHccCCCCCCCchHHHH
Confidence            9987753   3445554

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.88  E-value=4.2e-23  Score=175.25  Aligned_cols=84  Identities=23%  Similarity=0.325  Sum_probs=69.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccC----CcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTL----KVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~S~Gv  157 (208)
                      ++||..  +||||||+||+++.++.+||+|||+++...... .......||+.|+|||.+...    .++.++||||+||
T Consensus       156 ~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGv  235 (371)
T cd05622         156 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV  235 (371)
T ss_pred             HHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhH
Confidence            344544  999999999999999999999999998765432 122345789999999988643    3778999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      ++|||++|+.|
T Consensus       236 ilyell~G~~P  246 (371)
T cd05622         236 FLYEMLVGDTP  246 (371)
T ss_pred             HHHHHHhCCCC
Confidence            99999999999

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.88  E-value=1e-22  Score=169.51  Aligned_cols=84  Identities=26%  Similarity=0.323  Sum_probs=70.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.............|+..|+|||.+....++.++||||+||+++||
T Consensus       115 ~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el  194 (324)
T cd05587         115 FFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM  194 (324)
T ss_pred             HHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHH
Confidence            344444  999999999999999999999999987543222223345689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      +||+.|
T Consensus       195 ltG~~p  200 (324)
T cd05587         195 LAGQPP  200 (324)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.88  E-value=4.3e-23  Score=175.18  Aligned_cols=84  Identities=23%  Similarity=0.319  Sum_probs=69.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccC----CcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTL----KVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~S~Gv  157 (208)
                      ++||..  +||||||+|||++.++.+||+|||+++...... .......||+.|+|||.+...    .++.++|+||+||
T Consensus       156 ~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~  235 (370)
T cd05621         156 DAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV  235 (370)
T ss_pred             HHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehH
Confidence            344444  999999999999999999999999998765332 122345789999999988643    3678999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||++|+.|
T Consensus       236 ilyell~G~~P  246 (370)
T cd05621         236 FLFEMLVGDTP  246 (370)
T ss_pred             HHHHHHhCCCC
Confidence            99999999999

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=6.8e-23  Score=180.09  Aligned_cols=114  Identities=23%  Similarity=0.212  Sum_probs=85.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++.....  ........||+.|+|||.+....++.++||||||+++||+++|+.|
T Consensus       165 iHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~P  244 (496)
T PTZ00283        165 IHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRP  244 (496)
T ss_pred             ecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            99999999999999999999999999876533  2222345789999999999988899999999999999999999999


Q ss_pred             --cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 --RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 --~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        .....+++.......   ...+.+.+...+..+...|++
T Consensus       245 f~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~L~  282 (496)
T PTZ00283        245 FDGENMEEVMHKTLAGR---YDPLPPSISPEMQEIVTALLS  282 (496)
T ss_pred             CCCCCHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHcc
Confidence              334444444443322   122344455556666666654

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.88  E-value=8.6e-23  Score=166.97  Aligned_cols=82  Identities=27%  Similarity=0.285  Sum_probs=70.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||..  +||||||+||+++.++.+|++|||++....... ......|+..|+|||.+....++.++||||+||+++|++
T Consensus       117 ~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~  195 (285)
T cd05631         117 DLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMI  195 (285)
T ss_pred             HHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHH
Confidence            44443  999999999999999999999999998754332 223456899999999999888999999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       196 ~g~~p  200 (285)
T cd05631         196 QGQSP  200 (285)
T ss_pred             hCCCC
Confidence            99999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.87  E-value=1.7e-22  Score=168.36  Aligned_cols=84  Identities=27%  Similarity=0.353  Sum_probs=70.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++|+||+|++++||
T Consensus       115 ~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el  194 (323)
T cd05615         115 FFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM  194 (323)
T ss_pred             HHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHH
Confidence            344443  999999999999999999999999987643332223345689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       195 ltG~~p  200 (323)
T cd05615         195 LAGQPP  200 (323)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.87  E-value=7.6e-23  Score=162.15  Aligned_cols=77  Identities=27%  Similarity=0.307  Sum_probs=67.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      ||||+||+|||+|+.|.+|++|||.+..+.++... +...|.+.|||||.+.   ..+++.++||||||+.++||.||+.
T Consensus       214 iHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh-trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~y  292 (391)
T KOG0983|consen  214 IHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH-TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQY  292 (391)
T ss_pred             eecccCccceEEccCCCEEeecccccceeeccccc-ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccC
Confidence            99999999999999999999999999877655222 3346889999999886   4578899999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       293 P  293 (391)
T KOG0983|consen  293 P  293 (391)
T ss_pred             C
Confidence            9

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.87  E-value=5.4e-23  Score=169.13  Aligned_cols=122  Identities=20%  Similarity=0.235  Sum_probs=89.7

Q ss_pred             HHHhhhh--hhcCcCCCceeeCC-CCcEEEcccceeeeecCC---CCCccccccccccccccccccCC-cCcccchHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYTLK-VAKKCGMHSSG  156 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~S~G  156 (208)
                      ..|||++  +||||||+|||++. ++.+||+|||+++.....   ........||+.|||||++..+. ...++||||+|
T Consensus       130 L~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlG  209 (313)
T KOG0198|consen  130 LAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLG  209 (313)
T ss_pred             HHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcC
Confidence            3455544  99999999999999 799999999998876631   22233568999999999998543 33599999999


Q ss_pred             HHHHHHHcCCCCcccH---HHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          157 LLALEVMKGKHPRHFI---FSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       157 vvl~elltg~~p~~~l---~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+++||+||+.||...   .+++-....+.. . ..+...+...+.++-..|++
T Consensus       210 CtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~-~-P~ip~~ls~~a~~Fl~~C~~  261 (313)
T KOG0198|consen  210 CTVVEMLTGKPPWSEFFEEAEALLLIGREDS-L-PEIPDSLSDEAKDFLRKCFK  261 (313)
T ss_pred             CEEEeccCCCCcchhhcchHHHHHHHhccCC-C-CCCCcccCHHHHHHHHHHhh
Confidence            9999999999996553   444444444442 2 24555576677777777754

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.87  E-value=1e-22  Score=172.84  Aligned_cols=84  Identities=23%  Similarity=0.325  Sum_probs=69.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccC----CcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTL----KVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~S~Gv  157 (208)
                      +|||..  +||||||+|||++.++.+||+|||++....... .......|++.|+|||.+...    .++.++||||+||
T Consensus       156 ~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGv  235 (370)
T cd05596         156 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV  235 (370)
T ss_pred             HHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhH
Confidence            344544  999999999999999999999999998765432 122345789999999987643    4788999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||++|+.|
T Consensus       236 ilyelltG~~P  246 (370)
T cd05596         236 FLYEMLVGDTP  246 (370)
T ss_pred             HHHHHHhCCCC
Confidence            99999999999

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.87  E-value=1.9e-23  Score=183.99  Aligned_cols=115  Identities=18%  Similarity=0.233  Sum_probs=85.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCcccccc--ccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAG--TYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g--~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||...|||++.+..+|++|||+++.+.++. ...+...|  ...|.|||.+...+++..+||||||||+||.++ |.
T Consensus       753 VHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGE  832 (996)
T KOG0196|consen  753 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE  832 (996)
T ss_pred             hhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCC
Confidence            999999999999999999999999999887663 22333333  457999999999999999999999999999886 99


Q ss_pred             CC-cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          167 HP-RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p-~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +| |+.-.|-|.+.+.++-++..  ..+.....-++++.|+|
T Consensus       833 RPYWdmSNQdVIkaIe~gyRLPp--PmDCP~aL~qLMldCWq  872 (996)
T KOG0196|consen  833 RPYWDMSNQDVIKAIEQGYRLPP--PMDCPAALYQLMLDCWQ  872 (996)
T ss_pred             CcccccchHHHHHHHHhccCCCC--CCCCcHHHHHHHHHHHH
Confidence            99 43333444444444321211  12223356678888876

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.87  E-value=8.2e-23  Score=172.76  Aligned_cols=84  Identities=27%  Similarity=0.308  Sum_probs=69.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-----------------------------------CCcc
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-----------------------------------SNRT  127 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-----------------------------------~~~~  127 (208)
                      +|||+.  +||||||+|||++.++.+||+|||+++......                                   ....
T Consensus       115 ~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (363)
T cd05628         115 DSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAF  194 (363)
T ss_pred             HHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccc
Confidence            344444  999999999999999999999999987543210                                   0012


Q ss_pred             ccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          128 ELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       128 ~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ...||+.|+|||.+....++.++|||||||+++||++|+.|
T Consensus       195 ~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P  235 (363)
T cd05628         195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP  235 (363)
T ss_pred             cccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence            34689999999999888899999999999999999999999

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.87  E-value=3.6e-22  Score=165.84  Aligned_cols=84  Identities=27%  Similarity=0.341  Sum_probs=71.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++||||+||+++||
T Consensus       110 ~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el  189 (316)
T cd05592         110 QFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM  189 (316)
T ss_pred             HHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHH
Confidence            344444  999999999999999999999999998654333333455789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 l~G~~P  195 (316)
T cd05592         190 LIGQSP  195 (316)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.87  E-value=1.2e-22  Score=166.90  Aligned_cols=79  Identities=22%  Similarity=0.241  Sum_probs=68.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-------CCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||||||+|||++.++.++++|||+++......       .......||+.|+|||......++.++||||+||+++|++
T Consensus       148 iHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~  227 (294)
T PHA02882        148 SHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWA  227 (294)
T ss_pred             ecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998664321       1122346899999999998888999999999999999999


Q ss_pred             cCCCCc
Q 039937          164 KGKHPR  169 (208)
Q Consensus       164 tg~~p~  169 (208)
                      +|+.|+
T Consensus       228 ~g~~P~  233 (294)
T PHA02882        228 GIKLPW  233 (294)
T ss_pred             hCCCCC
Confidence            999993

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.2e-22  Score=166.67  Aligned_cols=119  Identities=20%  Similarity=0.220  Sum_probs=86.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||..  +||||||+||+++.++.+|++|||+++.............|++.|+|||.+....++.++||||+||+++||
T Consensus       107 ~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el  186 (312)
T cd05585         107 ENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEM  186 (312)
T ss_pred             HHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHH
Confidence            445554  999999999999999999999999987644333333445789999999999888899999999999999999


Q ss_pred             HcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+.|  .....+..+.......    .+...+...+..+...|++
T Consensus       187 ~tg~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~  229 (312)
T cd05585         187 LTGLPPFYDENVNEMYRKILQEPL----RFPDGFDRDAKDLLIGLLS  229 (312)
T ss_pred             HhCCCCcCCCCHHHHHHHHHcCCC----CCCCcCCHHHHHHHHHHcC
Confidence            999999  3344444444443321    1122333445555555543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.87  E-value=1.9e-22  Score=167.97  Aligned_cols=84  Identities=23%  Similarity=0.266  Sum_probs=71.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+....++.++||||+||+++||
T Consensus       109 ~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  188 (323)
T cd05571         109 GYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  188 (323)
T ss_pred             HHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhh
Confidence            455554  999999999999999999999999987643332233345789999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       189 ltg~~P  194 (323)
T cd05571         189 MCGRLP  194 (323)
T ss_pred             hcCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.87  E-value=2.7e-22  Score=167.10  Aligned_cols=84  Identities=21%  Similarity=0.225  Sum_probs=71.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +++|..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+....++.++||||+||+++||
T Consensus       110 ~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  189 (325)
T cd05602         110 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM  189 (325)
T ss_pred             HHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHH
Confidence            345544  999999999999999999999999987643333233445789999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~g~~p  195 (325)
T cd05602         190 LYGLPP  195 (325)
T ss_pred             hcCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=3.3e-22  Score=171.01  Aligned_cols=86  Identities=27%  Similarity=0.377  Sum_probs=78.7

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..+|||.+  +|||||+.||||+.++.+||.|||++..+...........||+.|||||......+++|.||||+|++++
T Consensus       381 aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaI  460 (550)
T KOG0578|consen  381 GLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAI  460 (550)
T ss_pred             HHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHH
Confidence            34566655  9999999999999999999999999999887766677889999999999999999999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+-|++|
T Consensus       461 EMveGEPP  468 (550)
T KOG0578|consen  461 EMVEGEPP  468 (550)
T ss_pred             HHhcCCCC
Confidence            99999999

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.87  E-value=2.2e-23  Score=164.52  Aligned_cols=89  Identities=25%  Similarity=0.240  Sum_probs=71.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-cC-CcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TL-KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~-~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ||||+||+|||+|..|.+|++|||.+..+..+ ...+.-.|...|||||.+. .. .++.++||||+|++++|+.||+-|
T Consensus       190 IHRDvKPSNILldr~G~vKLCDFGIcGqLv~S-iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fP  268 (361)
T KOG1006|consen  190 IHRDVKPSNILLDRHGDVKLCDFGICGQLVDS-IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFP  268 (361)
T ss_pred             hhccCChhheEEecCCCEeeecccchHhHHHH-HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCC
Confidence            99999999999999999999999998766543 1223446889999999886 23 478999999999999999999999


Q ss_pred             ---cccHHHHHHhhc
Q 039937          169 ---RHFIFSICSSSS  180 (208)
Q Consensus       169 ---~~~l~~~~~~~~  180 (208)
                         |.++.+-+....
T Consensus       269 yr~w~svfeql~~Vv  283 (361)
T KOG1006|consen  269 YRKWDSVFEQLCQVV  283 (361)
T ss_pred             cchHHHHHHHHHHHH
Confidence               444433344333

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.86  E-value=3.5e-22  Score=166.06  Aligned_cols=84  Identities=23%  Similarity=0.214  Sum_probs=70.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+....++.++||||+||+++||
T Consensus       110 ~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  189 (321)
T cd05603         110 GYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEM  189 (321)
T ss_pred             HHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhh
Confidence            445544  999999999999999999999999987543322223345689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~g~~p  195 (321)
T cd05603         190 LYGLPP  195 (321)
T ss_pred             hcCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.86  E-value=6.1e-22  Score=164.75  Aligned_cols=84  Identities=26%  Similarity=0.342  Sum_probs=71.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+....++.++||||+|++++||
T Consensus       110 ~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  189 (320)
T cd05590         110 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEM  189 (320)
T ss_pred             HHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHH
Confidence            344544  999999999999999999999999987644333333445789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~g~~P  195 (320)
T cd05590         190 LCGHAP  195 (320)
T ss_pred             hhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.86  E-value=3.4e-22  Score=166.93  Aligned_cols=84  Identities=26%  Similarity=0.311  Sum_probs=71.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++||||||++++||
T Consensus       110 ~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  189 (329)
T cd05618         110 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM  189 (329)
T ss_pred             HHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHH
Confidence            344444  999999999999999999999999987543322233345789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~g~~P  195 (329)
T cd05618         190 MAGRSP  195 (329)
T ss_pred             hhCCCC
Confidence            999998

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.86  E-value=6.9e-22  Score=164.67  Aligned_cols=84  Identities=23%  Similarity=0.292  Sum_probs=70.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+....++.++|||||||+++|+
T Consensus       109 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el  188 (323)
T cd05595         109 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  188 (323)
T ss_pred             HHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHH
Confidence            445544  999999999999999999999999987543322223345689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       189 l~g~~P  194 (323)
T cd05595         189 MCGRLP  194 (323)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.86  E-value=4.4e-22  Score=166.23  Aligned_cols=84  Identities=23%  Similarity=0.287  Sum_probs=71.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.............|++.|+|||.+....++.++||||+||+++|+
T Consensus       109 ~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el  188 (328)
T cd05593         109 DYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  188 (328)
T ss_pred             HHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHH
Confidence            455554  999999999999999999999999987643332223345689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       189 ltG~~P  194 (328)
T cd05593         189 MCGRLP  194 (328)
T ss_pred             hhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.86  E-value=4.6e-22  Score=165.43  Aligned_cols=84  Identities=31%  Similarity=0.382  Sum_probs=71.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .+||..  +||||||+||+++.++.+||+|||++..............|+..|+|||.+....++.++||||+|++++||
T Consensus       110 ~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el  189 (321)
T cd05591         110 MFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEM  189 (321)
T ss_pred             HHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHH
Confidence            455554  999999999999999999999999987644333333445689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~tg~~P  195 (321)
T cd05591         190 MAGQPP  195 (321)
T ss_pred             hcCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.86  E-value=3e-22  Score=167.14  Aligned_cols=84  Identities=27%  Similarity=0.342  Sum_probs=68.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccC-CcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~  160 (208)
                      ++||+.  +||||||+|||++.++.+||+|||+++..... ........|+..|+|||.+... ..+.++||||||++++
T Consensus       119 ~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  198 (332)
T cd05614         119 EHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIF  198 (332)
T ss_pred             HHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhh
Confidence            344443  99999999999999999999999998765433 2222345689999999998754 4678999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+||+.|
T Consensus       199 elltg~~p  206 (332)
T cd05614         199 ELLTGASP  206 (332)
T ss_pred             hhhcCCCC
Confidence            99999999

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=4.8e-22  Score=167.82  Aligned_cols=78  Identities=28%  Similarity=0.344  Sum_probs=66.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--------------------------------------Cccccccc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--------------------------------------NRTELAGT  132 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--------------------------------------~~~~~~g~  132 (208)
                      +||||||+|||++.++.+||+|||+++.+.....                                      ......||
T Consensus       123 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  202 (364)
T cd05599         123 IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGT  202 (364)
T ss_pred             EeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccC
Confidence            9999999999999999999999999876432100                                      00123589


Q ss_pred             cccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          133 YGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       133 ~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +.|+|||.+....++.++||||+||+++||++|+.|
T Consensus       203 ~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P  238 (364)
T cd05599         203 PDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP  238 (364)
T ss_pred             ccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence            999999999888899999999999999999999999

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.86  E-value=7.8e-22  Score=164.26  Aligned_cols=119  Identities=21%  Similarity=0.193  Sum_probs=84.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++||..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+.....+.++||||+|++++||
T Consensus       114 ~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  193 (323)
T cd05584         114 EHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDM  193 (323)
T ss_pred             HHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHH
Confidence            344444  999999999999999999999999987654333333345689999999999888888999999999999999


Q ss_pred             HcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+.|  .....+.........    ..+.+.+...+..+...|++
T Consensus       194 l~G~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~  236 (323)
T cd05584         194 LTGAPPFTAENRKKTIDKILKGK----LNLPPYLTPEARDLLKKLLK  236 (323)
T ss_pred             hcCCCCCCCCCHHHHHHHHHcCC----CCCCCCCCHHHHHHHHHHcc
Confidence            999999  222223333332221    11233444455555555543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=7.4e-22  Score=165.01  Aligned_cols=86  Identities=24%  Similarity=0.288  Sum_probs=73.0

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---Cc-cccccccccccccccc--cCCcCcccchHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NR-TELAGTYGYIALELTY--TLKVAKKCGMHS  154 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~-~~~~g~~~y~aPE~~~--~~~~~~~~Dv~S  154 (208)
                      -.+|||.+  ||||||+.|||+|.+|.+||+|||....+.....   .. ....|++.|||||++.  ...|+.|+||||
T Consensus       138 aL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwS  217 (516)
T KOG0582|consen  138 ALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWS  217 (516)
T ss_pred             HHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhh
Confidence            45677776  9999999999999999999999999887655421   11 5668999999999954  456889999999


Q ss_pred             HHHHHHHHHcCCCC
Q 039937          155 SGLLALEVMKGKHP  168 (208)
Q Consensus       155 ~Gvvl~elltg~~p  168 (208)
                      |||+..|+.+|..|
T Consensus       218 fGITA~ELA~G~aP  231 (516)
T KOG0582|consen  218 FGITACELAHGHAP  231 (516)
T ss_pred             hhHHHHHHhcCCCC
Confidence            99999999999999

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.86  E-value=4.3e-22  Score=165.73  Aligned_cols=84  Identities=24%  Similarity=0.229  Sum_probs=71.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+....++.++|||||||+++||
T Consensus       110 ~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el  189 (323)
T cd05575         110 GYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEM  189 (323)
T ss_pred             HHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhh
Confidence            345544  999999999999999999999999987543332233345689999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 l~g~~p  195 (323)
T cd05575         190 LYGLPP  195 (323)
T ss_pred             hcCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.86  E-value=8e-22  Score=164.17  Aligned_cols=84  Identities=23%  Similarity=0.264  Sum_probs=70.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+....++.++|+||||++++|+
T Consensus       115 ~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el  194 (324)
T cd05589         115 QYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEM  194 (324)
T ss_pred             HHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHH
Confidence            344444  999999999999999999999999987543332223345789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       195 ~~G~~p  200 (324)
T cd05589         195 LVGESP  200 (324)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.86  E-value=9.3e-22  Score=164.44  Aligned_cols=115  Identities=18%  Similarity=0.182  Sum_probs=80.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......++..|+|||.+....++.++||||||+++||+++ |+.
T Consensus       196 vHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~  275 (338)
T cd05102         196 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGAS  275 (338)
T ss_pred             ECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999986543311  1122345678999999988889999999999999999997 988


Q ss_pred             Ccc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..  ...+.....+.++. . ..........+..+...|++
T Consensus       276 pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~li~~cl~  315 (338)
T cd05102         276 PYPGVQINEEFCQRLKDGT-R-MRAPENATPEIYRIMLACWQ  315 (338)
T ss_pred             CCCCCCccHHHHHHHhcCC-C-CCCCCCCCHHHHHHHHHHcc
Confidence            822  11122222222221 1 11123334467777777875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=3.8e-22  Score=167.32  Aligned_cols=78  Identities=26%  Similarity=0.340  Sum_probs=68.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-----------------------------CCcccccccccccccccc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-----------------------------SNRTELAGTYGYIALELT  141 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-----------------------------~~~~~~~g~~~y~aPE~~  141 (208)
                      +||||||+||+++.++.+||+|||++.......                             .......|++.|+|||.+
T Consensus       123 iH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  202 (350)
T cd05573         123 IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVL  202 (350)
T ss_pred             eccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHH
Confidence            999999999999999999999999987654322                             122345689999999999


Q ss_pred             ccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          142 YTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       142 ~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ....++.++||||+||+++||++|+.|
T Consensus       203 ~~~~~~~~~DiwSlG~il~ell~g~~P  229 (350)
T cd05573         203 RGTPYGLECDWWSLGVILYEMLYGFPP  229 (350)
T ss_pred             cCCCCCCceeeEecchhhhhhccCCCC
Confidence            988899999999999999999999999

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.86  E-value=5.9e-22  Score=165.58  Aligned_cols=78  Identities=26%  Similarity=0.348  Sum_probs=65.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccc-----cCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||+||+++.++.+||+|||++...... ........||+.|+|||++.     ...++.++|||||||+++||++
T Consensus       124 iHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~  203 (332)
T cd05623         124 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLY  203 (332)
T ss_pred             EecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhc
Confidence            99999999999999999999999998765433 22223356899999999875     3457889999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       204 g~~P  207 (332)
T cd05623         204 GETP  207 (332)
T ss_pred             CCCC
Confidence            9999

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=9.1e-22  Score=161.46  Aligned_cols=75  Identities=29%  Similarity=0.333  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||+++.....   .....|++.|+|||.+.....+.++||||+|++++||++|+.|
T Consensus       123 ~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~p  197 (291)
T cd05612         123 VYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPP  197 (291)
T ss_pred             eecCCCHHHeEECCCCCEEEEecCcchhccCC---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998765432   1234688999999999888889999999999999999999999

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=4.7e-22  Score=166.08  Aligned_cols=75  Identities=23%  Similarity=0.233  Sum_probs=67.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||++.....   ......|++.|+|||.+....++.++||||+||+++||++|+.|
T Consensus       123 vH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~p  197 (333)
T cd05600         123 IHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPP  197 (333)
T ss_pred             cccCCCHHHEEECCCCCEEEEeCcCCccccc---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCC
Confidence            9999999999999999999999999876543   22345689999999999888899999999999999999999999

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.86  E-value=5.1e-22  Score=166.78  Aligned_cols=81  Identities=27%  Similarity=0.348  Sum_probs=70.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.....   .....||+.|+|||.+....++.++|+||+||+++||
T Consensus       145 ~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el  221 (340)
T PTZ00426        145 EYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEI  221 (340)
T ss_pred             HHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHH
Confidence            344444  99999999999999999999999999876432   1245689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       222 l~G~~P  227 (340)
T PTZ00426        222 LVGCPP  227 (340)
T ss_pred             hcCCCC
Confidence            999999

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.86  E-value=1.4e-21  Score=162.43  Aligned_cols=84  Identities=27%  Similarity=0.360  Sum_probs=71.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++||||+|++++||
T Consensus       110 ~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el  189 (316)
T cd05620         110 QFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEM  189 (316)
T ss_pred             HHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHH
Confidence            445544  999999999999999999999999987543222233445789999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~g~~P  195 (316)
T cd05620         190 LIGQSP  195 (316)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.86  E-value=5.3e-22  Score=165.73  Aligned_cols=80  Identities=29%  Similarity=0.327  Sum_probs=69.7

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      |||..  +||||||+||+++.++.+||+|||+++......   ....|++.|+|||.+.....+.++|||||||+++||+
T Consensus       133 ~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  209 (329)
T PTZ00263        133 YLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFI  209 (329)
T ss_pred             HHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHH
Confidence            44444  999999999999999999999999998764332   2346899999999998888899999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       210 tg~~p  214 (329)
T PTZ00263        210 AGYPP  214 (329)
T ss_pred             cCCCC
Confidence            99999

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.86  E-value=2.8e-23  Score=166.69  Aligned_cols=85  Identities=26%  Similarity=0.325  Sum_probs=76.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|||..  ||||||..||||+.+|.+|++|||++..+.+-.....++.||+.|||||++..-.++.++|+||+|++..|
T Consensus       142 L~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIE  221 (502)
T KOG0574|consen  142 LQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIE  221 (502)
T ss_pred             HHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhh
Confidence            4566654  99999999999999999999999999888765555667899999999999998889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |..|++|
T Consensus       222 MAEG~PP  228 (502)
T KOG0574|consen  222 MAEGRPP  228 (502)
T ss_pred             hhcCCCC
Confidence            9999999

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.86  E-value=8.6e-22  Score=163.28  Aligned_cols=120  Identities=20%  Similarity=0.214  Sum_probs=82.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCc--cccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +|||+.  +||||||+||+++.++.+||+|||+++.........  .....+..|++||.+....++.++||||||+++|
T Consensus       123 ~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~  202 (316)
T cd05108         123 NYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW  202 (316)
T ss_pred             HHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHH
Confidence            344444  999999999999999999999999998765432111  1223356799999998888999999999999999


Q ss_pred             HHHc-CCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+++ |+.|..  ...++.. ......  .....+.......++...|++
T Consensus       203 el~t~g~~p~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~li~~cl~  249 (316)
T cd05108         203 ELMTFGSKPYDGIPASEISS-ILEKGE--RLPQPPICTIDVYMIMVKCWM  249 (316)
T ss_pred             HHHcCCCCCCCCCCHHHHHH-HHhCCC--CCCCCCCCCHHHHHHHHHHcc
Confidence            9998 888832  2222221 111211  111123334466677777764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.86  E-value=9.2e-22  Score=164.17  Aligned_cols=84  Identities=25%  Similarity=0.313  Sum_probs=71.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|+|..  +||||||+||+++.++.+||+|||+++.............|++.|+|||.+....++.++||||+|++++||
T Consensus       110 ~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el  189 (327)
T cd05617         110 NFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM  189 (327)
T ss_pred             HHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHH
Confidence            344544  999999999999999999999999987543322233345789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 l~g~~p  195 (327)
T cd05617         190 MAGRSP  195 (327)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.86  E-value=1.6e-21  Score=162.03  Aligned_cols=84  Identities=27%  Similarity=0.360  Sum_probs=70.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++||||+||++||+
T Consensus       110 ~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el  189 (316)
T cd05619         110 QFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEM  189 (316)
T ss_pred             HHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHH
Confidence            344444  999999999999999999999999987543322223345689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~G~~p  195 (316)
T cd05619         190 LIGQSP  195 (316)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.85  E-value=5.3e-22  Score=165.85  Aligned_cols=78  Identities=27%  Similarity=0.379  Sum_probs=66.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-Ccccccccccccccccccc-----CCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYT-----LKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||+||+++.++.+||+|||+++....... ......|+..|+|||.+..     ..++.++||||||+++|||++
T Consensus       124 iHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~  203 (331)
T cd05624         124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLY  203 (331)
T ss_pred             eeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhh
Confidence            9999999999999999999999999987654322 2233568999999998764     457889999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       204 g~~P  207 (331)
T cd05624         204 GETP  207 (331)
T ss_pred             CCCC
Confidence            9999

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.85  E-value=5.4e-22  Score=165.25  Aligned_cols=84  Identities=24%  Similarity=0.235  Sum_probs=71.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++||||+||+++||
T Consensus       110 ~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el  189 (325)
T cd05604         110 GYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEM  189 (325)
T ss_pred             HHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhh
Confidence            455544  999999999999999999999999987543322233345689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~G~~p  195 (325)
T cd05604         190 LYGLPP  195 (325)
T ss_pred             hcCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.85  E-value=3e-22  Score=178.07  Aligned_cols=115  Identities=13%  Similarity=0.132  Sum_probs=85.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||...|.|+.++..+||+|||+++..-...  .......-.+.||+||.+.+++++++||||||||++||+++ |+.
T Consensus       625 VHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~Q  704 (774)
T KOG1026|consen  625 VHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQ  704 (774)
T ss_pred             cccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccC
Confidence            999999999999999999999999998654321  11112234578999999999999999999999999999997 999


Q ss_pred             Ccc-cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH-FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~-~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+. --.+-|.+.+++++ +... ......++-.+.+.|++
T Consensus       705 Py~glSn~EVIe~i~~g~-lL~~-Pe~CP~~vY~LM~~CW~  743 (774)
T KOG1026|consen  705 PYYGLSNQEVIECIRAGQ-LLSC-PENCPTEVYSLMLECWN  743 (774)
T ss_pred             cccccchHHHHHHHHcCC-cccC-CCCCCHHHHHHHHHHhh
Confidence            932 23344555556654 4222 33334467777777765

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=1.1e-22  Score=168.57  Aligned_cols=84  Identities=29%  Similarity=0.321  Sum_probs=71.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCC---CcEEEcccceeeeecCCCCCccccccccccccccccccCCcC---cccchHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLE---YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVA---KKCGMHSS  155 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~---~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~---~~~Dv~S~  155 (208)
                      ..|||+.  +||||||+|||+..+   ..+||+|||+++.... .....+++||+.|.|||++.+....   .+.|+||+
T Consensus       289 vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~-~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSl  367 (475)
T KOG0615|consen  289 VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE-GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSL  367 (475)
T ss_pred             HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccc-ceehhhhcCCccccChhheecCCeecccchheeeec
Confidence            4577766  999999999999766   8899999999999874 3455678999999999999865433   47799999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      ||+++.+++|..|
T Consensus       368 GcvLfvcLsG~pP  380 (475)
T KOG0615|consen  368 GCVLFVCLSGYPP  380 (475)
T ss_pred             cceEEEEeccCCC
Confidence            9999999999999

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=6.6e-22  Score=169.12  Aligned_cols=84  Identities=20%  Similarity=0.157  Sum_probs=70.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +|+|..  +||||||+||+++.++.+||+|||+++..... ........||+.|+|||.+....++.++||||+||++||
T Consensus       196 ~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  275 (391)
T PHA03212        196 QYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFE  275 (391)
T ss_pred             HHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHH
Confidence            455554  99999999999999999999999998754322 222234578999999999988889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       276 lltg~~p  282 (391)
T PHA03212        276 MATCHDS  282 (391)
T ss_pred             HHHCCCC
Confidence            9999977

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.85  E-value=1.3e-21  Score=163.33  Aligned_cols=84  Identities=26%  Similarity=0.322  Sum_probs=70.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++|+||+||+++|+
T Consensus       110 ~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el  189 (329)
T cd05588         110 NFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM  189 (329)
T ss_pred             HHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHH
Confidence            344444  999999999999999999999999987533222233345789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~g~~P  195 (329)
T cd05588         190 MAGRSP  195 (329)
T ss_pred             HHCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.85  E-value=9.2e-22  Score=165.70  Aligned_cols=84  Identities=20%  Similarity=0.283  Sum_probs=68.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-----CCcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-----LKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~S~Gv  157 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+..     ...+.++|||||||
T Consensus       182 ~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGv  261 (353)
T PLN00034        182 AYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGV  261 (353)
T ss_pred             HHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHH
Confidence            455555  99999999999999999999999999876543322334578999999998742     22346899999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      ++||+++|+.|
T Consensus       262 il~el~~g~~p  272 (353)
T PLN00034        262 SILEFYLGRFP  272 (353)
T ss_pred             HHHHHHhCCCC
Confidence            99999999999

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.85  E-value=6.9e-22  Score=164.65  Aligned_cols=85  Identities=22%  Similarity=0.275  Sum_probs=72.3

Q ss_pred             HHHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           84 EKLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..|||. .  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++||||+|++++
T Consensus       108 L~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  187 (325)
T cd05594         108 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY  187 (325)
T ss_pred             HHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceee
Confidence            457775 3  9999999999999999999999999876443322333456899999999998888999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       188 el~tG~~P  195 (325)
T cd05594         188 EMMCGRLP  195 (325)
T ss_pred             eeccCCCC
Confidence            99999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.85  E-value=1e-21  Score=167.04  Aligned_cols=83  Identities=25%  Similarity=0.376  Sum_probs=67.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-----------------------------------------
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-----------------------------------------  122 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-----------------------------------------  122 (208)
                      ++|..  +||||||+|||++.++.+||+|||++......                                         
T Consensus       116 ~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (382)
T cd05625         116 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERR  195 (382)
T ss_pred             HHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhh
Confidence            44444  99999999999999999999999987432100                                         


Q ss_pred             ------CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          123 ------SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       123 ------~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                            ........||+.|+|||.+....++.++||||+||+++||++|+.|
T Consensus       196 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~P  247 (382)
T cd05625         196 AARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPP  247 (382)
T ss_pred             hccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCC
Confidence                  0001124689999999999888899999999999999999999999

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.85  E-value=5e-22  Score=165.62  Aligned_cols=78  Identities=27%  Similarity=0.351  Sum_probs=66.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-Cccccccccccccccccc------cCCcCcccchHHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTY------TLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||||||+||+++.++.+||+|||++........ ......|++.|+|||.+.      ...++.++||||||++++||+
T Consensus       124 ~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~  203 (330)
T cd05601         124 VHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMI  203 (330)
T ss_pred             EcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeec
Confidence            9999999999999999999999999987654321 222346889999999876      445678999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       204 ~g~~P  208 (330)
T cd05601         204 YGRSP  208 (330)
T ss_pred             cCCCC
Confidence            99999

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.85  E-value=1.5e-21  Score=159.52  Aligned_cols=77  Identities=21%  Similarity=0.241  Sum_probs=67.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||+++..... .......++..|+|||.+....++.++||||||++++|+++|+.|
T Consensus       132 iH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~  208 (290)
T cd07862         132 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL  208 (290)
T ss_pred             eeCCCCHHHEEEcCCCCEEEccccceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCC
Confidence            99999999999999999999999999876533 222345688999999999888889999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.85  E-value=1e-21  Score=161.78  Aligned_cols=83  Identities=18%  Similarity=0.200  Sum_probs=68.0

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el  162 (208)
                      |||+.  +||||||+||+++.++.+||+|||+++.............++..|+|||.+.. ..++.++||||+||+++||
T Consensus       118 ~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  197 (303)
T cd07869         118 YIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEM  197 (303)
T ss_pred             HHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHH
Confidence            44444  99999999999999999999999998765433222334567899999998764 4578899999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       198 ~~g~~p  203 (303)
T cd07869         198 IQGVAA  203 (303)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.85  E-value=5.5e-22  Score=151.64  Aligned_cols=85  Identities=22%  Similarity=0.276  Sum_probs=71.0

Q ss_pred             hHHHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc----cCCcCcccchHHH
Q 039937           83 LEKLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY----TLKVAKKCGMHSS  155 (208)
Q Consensus        83 L~~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~S~  155 (208)
                      ..+|||++   ||||+||+|||++.+|.+|++|||.+..+.++. ..+.-.|+..|||||.+.    ...++.|+||||+
T Consensus       160 al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi-Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSL  238 (282)
T KOG0984|consen  160 ALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI-AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSL  238 (282)
T ss_pred             HHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh-HHHHhcCCCccCChhhcCcccCcccceeehhhhhh
Confidence            34566665   999999999999999999999999998776542 223346788999999875    3368899999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      |+.+.||.+++.|
T Consensus       239 GItmiElA~lr~P  251 (282)
T KOG0984|consen  239 GITMIEMAILRFP  251 (282)
T ss_pred             hhhhhhhhhcccc
Confidence            9999999999999

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.85  E-value=5.3e-22  Score=168.91  Aligned_cols=83  Identities=27%  Similarity=0.406  Sum_probs=67.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----------------------------------------
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----------------------------------------  123 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----------------------------------------  123 (208)
                      +||..  +||||||+|||++.++.+||+|||+++......                                        
T Consensus       116 ~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (381)
T cd05626         116 SVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQR  195 (381)
T ss_pred             HHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcc
Confidence            44443  999999999999999999999999875321000                                        


Q ss_pred             -------CCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          124 -------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       124 -------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                             .......||..|+|||.+....++.++||||+||+++||++|+.|
T Consensus       196 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~P  247 (381)
T cd05626         196 ATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPP  247 (381)
T ss_pred             ccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCC
Confidence                   001134689999999999888889999999999999999999999

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00284 protein kinase; Provisional

Probab=99.85  E-value=5.6e-22  Score=173.05  Aligned_cols=82  Identities=22%  Similarity=0.207  Sum_probs=68.0

Q ss_pred             HHHhhhh---hhcCcCCCceeeCCCC----------------cEEEcccceeeeecCCCCCccccccccccccccccccC
Q 039937           84 EKLLRQE---ISFTTSSKNGLLDLEY----------------EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL  144 (208)
Q Consensus        84 ~~~Lh~~---iH~dlk~~nilld~~~----------------~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  144 (208)
                      .+|||.+   +||||||+|||++.++                .+||+|||.+.....   ......||..|+|||.+...
T Consensus       244 L~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~---~~~~~~gt~~Y~APE~~~~~  320 (467)
T PTZ00284        244 LDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH---SRTAIVSTRHYRSPEVVLGL  320 (467)
T ss_pred             HHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc---ccccccCCccccCcHHhhcC
Confidence            3466642   9999999999998765                489999998754322   22345789999999999988


Q ss_pred             CcCcccchHHHHHHHHHHHcCCCC
Q 039937          145 KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       145 ~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      .++.++|||||||++|||++|+.|
T Consensus       321 ~~~~~~DiwSlGvil~elltG~~p  344 (467)
T PTZ00284        321 GWMYSTDMWSMGCIIYELYTGKLL  344 (467)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.2e-21  Score=166.34  Aligned_cols=83  Identities=24%  Similarity=0.308  Sum_probs=67.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-------------C--------------------------
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-------------S--------------------------  124 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-------------~--------------------------  124 (208)
                      |||..  +||||||+||+++.++.+|++|||+++......             .                          
T Consensus       116 ~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (377)
T cd05629         116 AVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIA  195 (377)
T ss_pred             HHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhh
Confidence            44444  999999999999999999999999986321100             0                          


Q ss_pred             --------CccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          125 --------NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       125 --------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                              ......||+.|+|||.+....++.++||||+||+++||++|+.|
T Consensus       196 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~P  247 (377)
T cd05629         196 TWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPP  247 (377)
T ss_pred             hhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCC
Confidence                    00023589999999999888899999999999999999999999

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.85  E-value=4e-22  Score=162.51  Aligned_cols=84  Identities=19%  Similarity=0.187  Sum_probs=71.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      +|+|++  +||||||.|||++..+..|++|||+++...-+....+...+|.+|.|||.+.+. .++...||||+||++.|
T Consensus       134 ~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaE  213 (323)
T KOG0594|consen  134 AFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAE  213 (323)
T ss_pred             HHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHH
Confidence            344444  999999999999999999999999999766554556667889999999998755 68999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++++.-
T Consensus       214 m~~~~~L  220 (323)
T KOG0594|consen  214 MFTRRPL  220 (323)
T ss_pred             HHhCCCC
Confidence            9997753

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.85  E-value=1.3e-21  Score=160.30  Aligned_cols=84  Identities=15%  Similarity=0.186  Sum_probs=69.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||+.  +||||||+||+++.++.+||+|||+++.............++..|+|||.+.. ..++.++||||+|++++|
T Consensus       117 ~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~  196 (288)
T cd07871         117 SYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYE  196 (288)
T ss_pred             HHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHH
Confidence            344444  99999999999999999999999998865433323334567899999998764 567899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       197 l~~g~~p  203 (288)
T cd07871         197 MATGRPM  203 (288)
T ss_pred             HHhCCCC
Confidence            9999988

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.85  E-value=7.7e-22  Score=166.58  Aligned_cols=83  Identities=28%  Similarity=0.318  Sum_probs=68.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-----------------------------------CCccc
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-----------------------------------SNRTE  128 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-----------------------------------~~~~~  128 (208)
                      +||..  +||||||+||+++.++.+||+|||+++......                                   .....
T Consensus       116 ~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (360)
T cd05627         116 AIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYS  195 (360)
T ss_pred             HHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccc
Confidence            44443  999999999999999999999999986442110                                   00113


Q ss_pred             cccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          129 LAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       129 ~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ..||+.|+|||.+....++.++||||+||+++||++|+.|
T Consensus       196 ~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P  235 (360)
T cd05627         196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP  235 (360)
T ss_pred             cCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence            4689999999999888899999999999999999999999

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=4.1e-21  Score=162.63  Aligned_cols=78  Identities=21%  Similarity=0.252  Sum_probs=69.6

Q ss_pred             hhcCcCCCceeeCCC-CcEEEcccceeeeecCCCCCccccccccccccccccccCC-cC-cccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK-VA-KKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+|||+|.+ +.+||+|||++.............+||+.|+|||.+.... ++ .++||||+||+||.|++|+.
T Consensus       142 ~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~  221 (370)
T KOG0583|consen  142 VHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRL  221 (370)
T ss_pred             eeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCC
Confidence            999999999999999 9999999999998842333455678999999999998766 65 89999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       222 P  222 (370)
T KOG0583|consen  222 P  222 (370)
T ss_pred             C
Confidence            9

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.85  E-value=1.4e-21  Score=159.37  Aligned_cols=78  Identities=24%  Similarity=0.239  Sum_probs=68.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||++...... ........++..|+|||.+....++.++|+||+||+++|+++|+.|
T Consensus       122 ~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~p  200 (287)
T cd07848         122 VHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPL  200 (287)
T ss_pred             ecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCC
Confidence            99999999999999999999999999876543 2222345688999999999888889999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.85  E-value=1.5e-21  Score=157.88  Aligned_cols=114  Identities=19%  Similarity=0.245  Sum_probs=81.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+||++++++.++++|||++..............|+..|+|||++.     ...++.++||||||++++|+++|
T Consensus       133 vh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g  212 (272)
T cd06637         133 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG  212 (272)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhC
Confidence            9999999999999999999999999886544322334456888999999875     33577899999999999999999


Q ss_pred             CCCccc---HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          166 KHPRHF---IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       166 ~~p~~~---l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +.|...   ...+. ......  .....+..+...+.++..+|++
T Consensus       213 ~~p~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~li~~~l~  254 (272)
T cd06637         213 APPLCDMHPMRALF-LIPRNP--APRLKSKKWSKKFQSFIESCLV  254 (272)
T ss_pred             CCCccccCHHHHHH-HHhcCC--CCCCCCCCcCHHHHHHHHHHcC
Confidence            998321   11111 111111  2333444555677777777765

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2.9e-21  Score=161.38  Aligned_cols=78  Identities=26%  Similarity=0.343  Sum_probs=65.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-Ccccccccccccccccccc-----CCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYT-----LKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||+||+++.++.+||+|||++........ ......|++.|+|||.+..     ..++.++||||+||+++||++
T Consensus       124 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~  203 (331)
T cd05597         124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY  203 (331)
T ss_pred             EECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh
Confidence            9999999999999999999999999876544321 2223468999999998862     456789999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       204 g~~P  207 (331)
T cd05597         204 GETP  207 (331)
T ss_pred             CCCC
Confidence            9999

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.84  E-value=4.3e-21  Score=159.47  Aligned_cols=84  Identities=27%  Similarity=0.336  Sum_probs=70.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++|+||+||+++|+
T Consensus       110 ~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l  189 (318)
T cd05570         110 QFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEM  189 (318)
T ss_pred             HHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHH
Confidence            345544  999999999999999999999999987543332223345688999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       190 ~~G~~p  195 (318)
T cd05570         190 LAGQSP  195 (318)
T ss_pred             hhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.1e-21  Score=179.58  Aligned_cols=115  Identities=17%  Similarity=0.096  Sum_probs=80.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcc--ccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRT--ELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      |||||..+|+||+....+||+|||+++-+........  ...-...|||||.+..+.++.|+|||||||++||++| |..
T Consensus       824 vHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~  903 (1025)
T KOG1095|consen  824 VHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGAT  903 (1025)
T ss_pred             cCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCC
Confidence            9999999999999999999999999994433211111  1122467999999999999999999999999999998 888


Q ss_pred             CcccHHHHHHh--hcCCCCCCccccCCCCCchHHHHhccccCC
Q 039937          168 PRHFIFSICSS--SSNFVIAPHEILDPRFQPHHTMFGVNCYQS  208 (208)
Q Consensus       168 p~~~l~~~~~~--~~~~~~~~~~~~D~~l~~~~~~~~~~C~q~  208 (208)
                      |..+...|-..  .+..++ +  -..+...+...++...|+++
T Consensus       904 PY~~~~n~~v~~~~~~ggR-L--~~P~~CP~~ly~lM~~CW~~  943 (1025)
T KOG1095|consen  904 PYPSRSNFEVLLDVLEGGR-L--DPPSYCPEKLYQLMLQCWKH  943 (1025)
T ss_pred             CCCCcchHHHHHHHHhCCc-c--CCCCCCChHHHHHHHHHccC
Confidence            83333332111  222221 1  11334455677888888763

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.84  E-value=4.5e-21  Score=156.23  Aligned_cols=78  Identities=23%  Similarity=0.307  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||+++......  .......++..|++||.+..+.++.++||||||+++||+++ |+.
T Consensus       131 iH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~  210 (279)
T cd05111         131 VHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAE  210 (279)
T ss_pred             eccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999998764331  12233456778999999988889999999999999999998 988


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       211 p  211 (279)
T cd05111         211 P  211 (279)
T ss_pred             C
Confidence            8

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.84  E-value=1.5e-21  Score=159.64  Aligned_cols=77  Identities=23%  Similarity=0.260  Sum_probs=66.6

Q ss_pred             hhcCcCCCceeeCCC-CcEEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      .||||||.|+|+|.+ +.+||||||-|+....+.... .-..|..|.|||.+. ...++.+.||||.|||+.||+.|+.-
T Consensus       147 cHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni-SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~pl  225 (364)
T KOG0658|consen  147 CHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI-SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPL  225 (364)
T ss_pred             ccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce-eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcc
Confidence            999999999999976 999999999999887664332 335689999999887 45789999999999999999999964

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.84  E-value=5.1e-21  Score=156.07  Aligned_cols=85  Identities=27%  Similarity=0.285  Sum_probs=73.2

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|+|+.  +||||||+||+++.++.++++|||++..............|+..|+|||.+....++.++||||||++++|
T Consensus       110 l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~e  189 (280)
T cd05608         110 LEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYE  189 (280)
T ss_pred             HHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHH
Confidence            3456655  99999999999999999999999999876544333334578899999999998889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       190 l~~g~~p  196 (280)
T cd05608         190 MIAARGP  196 (280)
T ss_pred             HHhCCCC
Confidence            9999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.84  E-value=1.3e-21  Score=165.97  Aligned_cols=83  Identities=25%  Similarity=0.376  Sum_probs=67.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-----------------------------------------
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-----------------------------------------  122 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-----------------------------------------  122 (208)
                      +||..  +||||||+||+++.++.+||+|||++......                                         
T Consensus       116 ~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (376)
T cd05598         116 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQ  195 (376)
T ss_pred             HHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence            44444  99999999999999999999999987422100                                         


Q ss_pred             --CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          123 --SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       123 --~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                        ........||+.|+|||.+....++.++||||+||+++||++|+.|
T Consensus       196 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~P  243 (376)
T cd05598         196 HQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPP  243 (376)
T ss_pred             cccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCC
Confidence              0001134689999999999888889999999999999999999999

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.84  E-value=4.2e-21  Score=156.12  Aligned_cols=78  Identities=21%  Similarity=0.365  Sum_probs=65.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+||+|||+++.......  ......++..|++||......++.++||||||+++||+++ |+.
T Consensus       131 iH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~  210 (279)
T cd05109         131 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAK  210 (279)
T ss_pred             eccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999987654321  1112234567999999988889999999999999999998 888


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       211 p  211 (279)
T cd05109         211 P  211 (279)
T ss_pred             C
Confidence            8

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.83  E-value=9.7e-21  Score=160.97  Aligned_cols=78  Identities=26%  Similarity=0.319  Sum_probs=65.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+||+|||+++.......  ......++..|+|||.+....++.++||||||++++|+++ |+.
T Consensus       234 iHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~  313 (374)
T cd05106         234 IHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKS  313 (374)
T ss_pred             EeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999986543311  1112234567999999988889999999999999999997 998


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       314 P  314 (374)
T cd05106         314 P  314 (374)
T ss_pred             C
Confidence            8

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.8e-21  Score=162.33  Aligned_cols=85  Identities=26%  Similarity=0.298  Sum_probs=70.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~  160 (208)
                      ..|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+... .++.++||||+||+++
T Consensus       109 l~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~  188 (330)
T cd05586         109 LEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVF  188 (330)
T ss_pred             HHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEE
Confidence            3456655  999999999999999999999999987643332233445789999999988654 4789999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       189 elltG~~P  196 (330)
T cd05586         189 EMCCGWSP  196 (330)
T ss_pred             EeccCCCC
Confidence            99999999

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.83  E-value=9.5e-21  Score=165.86  Aligned_cols=78  Identities=26%  Similarity=0.257  Sum_probs=68.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++......  .......||++|+|||.+....++.++||||+||+++||++|+.|
T Consensus       191 vHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~P  270 (478)
T PTZ00267        191 MHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRP  270 (478)
T ss_pred             EECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999998765431  123345689999999999888899999999999999999999999

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.83  E-value=1.5e-20  Score=153.76  Aligned_cols=119  Identities=20%  Similarity=0.155  Sum_probs=84.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++||..  +||||||+||+++.++.++++|||++........ .....|+..|+|||.+....++.++|+||+|++++|+
T Consensus       116 ~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l  194 (285)
T cd05632         116 EDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES-IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEM  194 (285)
T ss_pred             HHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHH
Confidence            344444  9999999999999999999999999876543321 2334688999999999888889999999999999999


Q ss_pred             HcCCCCcccHH-----HHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHPRHFIF-----SICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p~~~l~-----~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+.|.....     +-+......   ......+.+...+..+...|++
T Consensus       195 ~~g~~P~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~  241 (285)
T cd05632         195 IEGQSPFRGRKEKVKREEVDRRVLE---TEEVYSAKFSEEAKSICKMLLT  241 (285)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhhhc---cccccCccCCHHHHHHHHHHcc
Confidence            99999932211     111111111   1122334455566667776764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.83  E-value=1.3e-20  Score=153.28  Aligned_cols=114  Identities=11%  Similarity=0.118  Sum_probs=81.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +|+||||+||++++++.++|+|||+++......  .......++..|+|||.+....++.++||||||++++|+++ |..
T Consensus       146 ~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~  225 (283)
T cd05048         146 VHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQ  225 (283)
T ss_pred             eccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999988654321  11223345778999999988889999999999999999998 988


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+... .+.... .. .+.......+..+...|++
T Consensus       226 p~~~~~~~~~~~-~i~~~~-~~-~~~~~~~~~~~~l~~~c~~  264 (283)
T cd05048         226 PYYGFSNQEVIE-MIRSRQ-LL-PCPEDCPARVYALMIECWN  264 (283)
T ss_pred             CCCCCCHHHHHH-HHHcCC-cC-CCcccCCHHHHHHHHHHcc
Confidence            82  22222222 122221 11 1233455677788888875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.83  E-value=8.8e-22  Score=181.03  Aligned_cols=90  Identities=26%  Similarity=0.262  Sum_probs=73.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----CCccccccccccccccccccCC---cCcccchHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYTLK---VAKKCGMHSS  155 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~S~  155 (208)
                      .+||.+  +||||||.||+||.++..|+.|||.+..+..+.    .......||+.|||||.+.+.+   -.-..||||+
T Consensus      1348 a~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWsl 1427 (1509)
T KOG4645|consen 1348 AYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSL 1427 (1509)
T ss_pred             HHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcc
Confidence            355554  999999999999999999999999999887652    2234568999999999987433   3467899999


Q ss_pred             HHHHHHHHcCCCCcccHHH
Q 039937          156 GLLALEVMKGKHPRHFIFS  174 (208)
Q Consensus       156 Gvvl~elltg~~p~~~l~~  174 (208)
                      |||++||+||++||..+..
T Consensus      1428 GCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1428 GCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred             cceEEEeecCCCchhhccc
Confidence            9999999999999665543

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.83  E-value=8.4e-21  Score=153.53  Aligned_cols=119  Identities=13%  Similarity=0.061  Sum_probs=80.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||+.  +||||||+||+++.++.++++|||......... .......++..|+|||.+....++.++||||||++++|+
T Consensus       122 ~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  201 (266)
T cd05064         122 YLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEV  201 (266)
T ss_pred             HHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHH
Confidence            44444  999999999999999999999999765533221 111122345689999999888899999999999999998


Q ss_pred             Hc-CCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MK-GKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 lt-g~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++ |+.|..  ...+.+.. +.+.  ......+.....+.++...|++
T Consensus       202 l~~g~~p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~li~~c~~  246 (266)
T cd05064         202 MSYGERPYWDMSGQDVIKA-VEDG--FRLPAPRNCPNLLHQLMLDCWQ  246 (266)
T ss_pred             hcCCCCCcCcCCHHHHHHH-HHCC--CCCCCCCCCCHHHHHHHHHHcC
Confidence            75 999832  22222222 2222  1112233445567777777875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=2.2e-21  Score=176.49  Aligned_cols=85  Identities=22%  Similarity=0.318  Sum_probs=73.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccc----c-CCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTY----T-LKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~----~-~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      |||||||.|||||..|++||+|||-+..+..+ ........|||-|++||.+.    + +.++...|.||+||++|||+.
T Consensus       197 VHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMly  276 (1317)
T KOG0612|consen  197 VHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLY  276 (1317)
T ss_pred             eeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHc
Confidence            99999999999999999999999988777754 44556678999999999886    2 678899999999999999999


Q ss_pred             CCCC--cccHHHH
Q 039937          165 GKHP--RHFIFSI  175 (208)
Q Consensus       165 g~~p--~~~l~~~  175 (208)
                      |..|  ...++.-
T Consensus       277 G~TPFYadslveT  289 (1317)
T KOG0612|consen  277 GETPFYADSLVET  289 (1317)
T ss_pred             CCCcchHHHHHHH
Confidence            9999  3444443

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.83  E-value=1.5e-20  Score=157.67  Aligned_cols=115  Identities=17%  Similarity=0.190  Sum_probs=82.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.++|+|||+++.+.....  ......++..|+|||++....++.++|||||||+++|+++ |+.
T Consensus       195 vHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~  274 (337)
T cd05054         195 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGAS  274 (337)
T ss_pred             ecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999987543311  1122345678999999998899999999999999999997 988


Q ss_pred             Ccc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..  ...+.....+...  .....+......+..+..+|++
T Consensus       275 p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~  314 (337)
T cd05054         275 PYPGVQIDEEFCRRLKEG--TRMRAPEYATPEIYSIMLDCWH  314 (337)
T ss_pred             CCCCCCccHHHHHHHhcc--CCCCCCccCCHHHHHHHHHHcc
Confidence            832  1112222222222  2222233445577888888876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.83  E-value=9.6e-21  Score=160.58  Aligned_cols=78  Identities=21%  Similarity=0.187  Sum_probs=65.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccC-CcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++..... ........++..|+|||.+.+. .++.++||||+||+++||++|+.|
T Consensus       125 vH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  204 (372)
T cd07853         125 LHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRIL  204 (372)
T ss_pred             eCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCC
Confidence            99999999999999999999999999875433 2222334578899999988753 468899999999999999999988

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.83  E-value=1.2e-20  Score=151.79  Aligned_cols=114  Identities=18%  Similarity=0.121  Sum_probs=79.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.++++|||++....... .......++..|+|||+.....++.++|+||||++++|++| |+.|
T Consensus       125 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p  204 (261)
T cd05072         125 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP  204 (261)
T ss_pred             eccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCC
Confidence            999999999999999999999999998765431 11222345678999999988888999999999999999998 8888


Q ss_pred             cc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..  ...+... .+...  ........+...+.++...|++
T Consensus       205 ~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~li~~~l~  242 (261)
T cd05072         205 YPGMSNSDVMS-ALQRG--YRMPRMENCPDELYDIMKTCWK  242 (261)
T ss_pred             CCCCCHHHHHH-HHHcC--CCCCCCCCCCHHHHHHHHHHcc
Confidence            21  1111111 11111  1111223445577777777764

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=5.9e-21  Score=168.06  Aligned_cols=83  Identities=18%  Similarity=0.164  Sum_probs=69.9

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      |||..  +||||||+|||++.++.+||+|||+++..... ........|+..|+|||.+....++.++|||||||++|||
T Consensus       282 yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el  361 (501)
T PHA03210        282 YIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDM  361 (501)
T ss_pred             HHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHH
Confidence            44444  99999999999999999999999999876543 2222345789999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.+
T Consensus       362 l~~~~~  367 (501)
T PHA03210        362 LSHDFC  367 (501)
T ss_pred             HHCCCC
Confidence            998754

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.83  E-value=7.1e-21  Score=160.28  Aligned_cols=82  Identities=20%  Similarity=0.171  Sum_probs=69.6

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||..  +||||||+||+++.++.+||+|||+++...... ......++..|+|||.+....++.++||||+|++++||+
T Consensus       134 ~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~  212 (355)
T cd07874         134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV  212 (355)
T ss_pred             HHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc-ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence            44444  999999999999999999999999998654331 223346789999999998888899999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       213 ~g~~p  217 (355)
T cd07874         213 RHKIL  217 (355)
T ss_pred             hCCCC
Confidence            99988

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.2e-20  Score=156.96  Aligned_cols=78  Identities=28%  Similarity=0.340  Sum_probs=71.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      |.||||..||+||.++++||+|||+++.---+.....+.+||+.|+|||.+.+..++...|.|||||+||||+.|++|
T Consensus       472 iYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpP  549 (683)
T KOG0696|consen  472 IYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP  549 (683)
T ss_pred             eeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999998754444455678999999999999999999999999999999999999999

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.83  E-value=2.7e-20  Score=148.89  Aligned_cols=114  Identities=18%  Similarity=0.195  Sum_probs=83.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCc-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR-  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~-  169 (208)
                      +|+||||+||+++.++.++++|||+++.............++..|+|||+.....++.++|+||||++++|+++|+.|. 
T Consensus       123 ~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  202 (256)
T cd08529         123 LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFD  202 (256)
T ss_pred             ccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999999999887665433333456788999999998888899999999999999999999992 


Q ss_pred             -ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 -HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 -~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                       ..-.+....... .  ....+...+...+..+..+|++
T Consensus       203 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~i~~~l~  238 (256)
T cd08529         203 ANNQGALILKIIR-G--VFPPVSQMYSQQLAQLIDQCLT  238 (256)
T ss_pred             CCCHHHHHHHHHc-C--CCCCCccccCHHHHHHHHHHcc
Confidence             121122222221 1  1112222455567777777765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.83  E-value=5.4e-21  Score=159.38  Aligned_cols=84  Identities=26%  Similarity=0.256  Sum_probs=68.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC---CCCcccccccccccccccccc--CCcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYT--LKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~S~Gv  157 (208)
                      .|||+.  +||||||+||+++.++.+||+|||+++.....   ........++..|+|||.+..  ..++.++|||||||
T Consensus       117 ~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGv  196 (338)
T cd07859         117 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC  196 (338)
T ss_pred             HHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHH
Confidence            345544  99999999999999999999999998865332   111234568899999998764  57789999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++|+++|+.|
T Consensus       197 vl~el~tg~~p  207 (338)
T cd07859         197 IFAEVLTGKPL  207 (338)
T ss_pred             HHHHHHcCCCC
Confidence            99999999988

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.83  E-value=2.1e-20  Score=150.76  Aligned_cols=115  Identities=17%  Similarity=0.204  Sum_probs=81.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCc-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR-  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~-  169 (208)
                      +|+||||+||+++.++.++++|||++..............++..|+|||.+.....+.++|+||||++++|+++|+.|. 
T Consensus       128 ~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~  207 (267)
T cd08228         128 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY  207 (267)
T ss_pred             eCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence            9999999999999999999999999887654332223346788999999998888899999999999999999999992 


Q ss_pred             ---ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 ---HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 ---~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                         ....++........  ............+.++...|++
T Consensus       208 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~  246 (267)
T cd08228         208 GDKMNLFSLCQKIEQCD--YPPLPTEHYSEKLRELVSMCIY  246 (267)
T ss_pred             cccccHHHHHHHHhcCC--CCCCChhhcCHHHHHHHHHHCC
Confidence               12233333322111  2222222333456666666764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.83  E-value=9.8e-21  Score=158.16  Aligned_cols=82  Identities=22%  Similarity=0.300  Sum_probs=69.7

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .|||+.   +||||||+||+++.++.+||+|||++......  ......++..|+|||.+....++.++||||||++++|
T Consensus       117 ~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e  194 (331)
T cd06649         117 AYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE  194 (331)
T ss_pred             HHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHH
Confidence            455542   79999999999999999999999998765432  1223468899999999988889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       195 l~tg~~p  201 (331)
T cd06649         195 LAIGRYP  201 (331)
T ss_pred             HHhCCCC
Confidence            9999998

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.82  E-value=6.7e-21  Score=161.03  Aligned_cols=77  Identities=21%  Similarity=0.192  Sum_probs=67.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++...... ......++..|+|||.+....++.++||||+||+++||++|+.|
T Consensus       148 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~p  224 (364)
T cd07875         148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL  224 (364)
T ss_pred             ecCCCCHHHEEECCCCcEEEEeCCCccccCCCC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCC
Confidence            999999999999999999999999998654331 22334678999999999888899999999999999999999988

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.82  E-value=6e-21  Score=165.56  Aligned_cols=77  Identities=21%  Similarity=0.162  Sum_probs=64.4

Q ss_pred             hhcCcCCCceeeCCC-CcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.+ +.+||+|||+++....... .....+++.|+|||.+.+ ..++.++||||+||+++||++|+.|
T Consensus       192 iHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~p  270 (440)
T PTZ00036        192 CHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPI  270 (440)
T ss_pred             ecCCcCHHHEEEcCCCCceeeeccccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999965 4799999999986654322 123467899999998764 4688999999999999999999988

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.82  E-value=1.8e-20  Score=150.84  Aligned_cols=114  Identities=18%  Similarity=0.188  Sum_probs=80.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.++++|||+++....... .......+..|+|||+.....++.++|+||||++++|++| |+.|
T Consensus       125 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p  204 (261)
T cd05068         125 IHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMP  204 (261)
T ss_pred             eeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999987653311 1112223457999999988888999999999999999999 8888


Q ss_pred             ccc--HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHF--IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~--l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ...  ..+... .+...  ............+..+..+|++
T Consensus       205 ~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~li~~~l~  242 (261)
T cd05068         205 YPGMTNAEVLQ-QVDQG--YRMPCPPGCPKELYDIMLDCWK  242 (261)
T ss_pred             CCCCCHHHHHH-HHHcC--CCCCCCCcCCHHHHHHHHHHhh
Confidence            221  111111 11111  1111233455677888888875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.82  E-value=1e-20  Score=156.63  Aligned_cols=84  Identities=18%  Similarity=0.204  Sum_probs=67.8

Q ss_pred             HHhhhh--hhcCcCCCceee----CCCCcEEEcccceeeeecCCC---CCcccccccccccccccccc-CCcCcccchHH
Q 039937           85 KLLRQE--ISFTTSSKNGLL----DLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYT-LKVAKKCGMHS  154 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nill----d~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S  154 (208)
                      +|||+.  +||||||+|||+    +..+.+||+|||+++......   .......+|+.|+|||.+.. ..++.++||||
T Consensus       122 ~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws  201 (317)
T cd07868         122 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA  201 (317)
T ss_pred             HHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHH
Confidence            344444  999999999999    466889999999998765431   12234578899999998875 45789999999


Q ss_pred             HHHHHHHHHcCCCC
Q 039937          155 SGLLALEVMKGKHP  168 (208)
Q Consensus       155 ~Gvvl~elltg~~p  168 (208)
                      +||+++|+++|+.|
T Consensus       202 lG~il~el~~g~~~  215 (317)
T cd07868         202 IGCIFAELLTSEPI  215 (317)
T ss_pred             HHHHHHHHHhCCCC
Confidence            99999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.82  E-value=9.1e-21  Score=159.94  Aligned_cols=82  Identities=21%  Similarity=0.193  Sum_probs=69.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||..  +||||||+||+++.++.+||+|||+++...... ......++..|+|||.+....++.++||||+|+++|||+
T Consensus       138 ~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  216 (359)
T cd07876         138 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV  216 (359)
T ss_pred             HHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCc-cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHH
Confidence            44444  999999999999999999999999987643321 223346789999999998888999999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       217 tg~~p  221 (359)
T cd07876         217 KGSVI  221 (359)
T ss_pred             hCCCC
Confidence            99998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=1.1e-20  Score=161.58  Aligned_cols=114  Identities=24%  Similarity=0.294  Sum_probs=83.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--Ccccccccccccccccccc-----------CCcCcccchHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYT-----------LKVAKKCGMHSSGL  157 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv  157 (208)
                      ||.||||.|+|+- .|.+||.|||.+..+..++.  .....+||+.||+||.+..           .+++.++||||+||
T Consensus       482 VHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGC  560 (677)
T KOG0596|consen  482 VHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGC  560 (677)
T ss_pred             eecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhh
Confidence            9999999999885 47899999999999987733  3345689999999998752           24779999999999


Q ss_pred             HHHHHHcCCCCcccHH-HHHHhhc-CCCCCCccccCCCCCc--hHHHHhccccC
Q 039937          158 LALEVMKGKHPRHFIF-SICSSSS-NFVIAPHEILDPRFQP--HHTMFGVNCYQ  207 (208)
Q Consensus       158 vl~elltg~~p~~~l~-~~~~~~~-~~~~~~~~~~D~~l~~--~~~~~~~~C~q  207 (208)
                      +||+|+.|+.|.+.+. .|.+-.. .+.  -.++-=|.+.+  ++++++-.|++
T Consensus       561 ILYqMvYgktPf~~~~n~~aKl~aI~~P--~~~Iefp~~~~~~~li~~mK~CL~  612 (677)
T KOG0596|consen  561 ILYQMVYGKTPFGQIINQIAKLHAITDP--NHEIEFPDIPENDELIDVMKCCLA  612 (677)
T ss_pred             HHHHHHhcCCchHHHHHHHHHHHhhcCC--CccccccCCCCchHHHHHHHHHHh
Confidence            9999999999955544 4443221 111  12222333333  57788888875

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.8e-20  Score=153.27  Aligned_cols=82  Identities=27%  Similarity=0.265  Sum_probs=69.6

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      ++|+.  +||||||+||++++++.++++|||++....... ......|+..|+|||.+....++.++|+||+|++++|++
T Consensus       117 ~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~  195 (285)
T cd05605         117 DLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMI  195 (285)
T ss_pred             HHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHH
Confidence            44443  999999999999999999999999988764332 122346789999999998888899999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       196 ~g~~p  200 (285)
T cd05605         196 EGKSP  200 (285)
T ss_pred             HCCCC
Confidence            99999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.82  E-value=2e-20  Score=171.83  Aligned_cols=78  Identities=23%  Similarity=0.309  Sum_probs=67.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC------------------CCccccccccccccccccccCCcCcccch
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS------------------SNRTELAGTYGYIALELTYTLKVAKKCGM  152 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv  152 (208)
                      +||||||+||+++.++.++++|||+++......                  .......||+.|+|||.+.+...+.++||
T Consensus       135 IHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDI  214 (932)
T PRK13184        135 LHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDI  214 (932)
T ss_pred             cccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHH
Confidence            999999999999999999999999998762110                  01113468999999999988889999999


Q ss_pred             HHHHHHHHHHHcCCCC
Q 039937          153 HSSGLLALEVMKGKHP  168 (208)
Q Consensus       153 ~S~Gvvl~elltg~~p  168 (208)
                      ||+||+++||+||+.|
T Consensus       215 WSLGVILyELLTG~~P  230 (932)
T PRK13184        215 YALGVILYQMLTLSFP  230 (932)
T ss_pred             HHHHHHHHHHHHCCCC
Confidence            9999999999999999

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=4.3e-21  Score=165.35  Aligned_cols=81  Identities=23%  Similarity=0.242  Sum_probs=71.4

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLL  158 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvv  158 (208)
                      ..|||+.  ||||||..||||.+++.+|++|||.+....+    ...+.||+.|||||++.   .+.++-|.||||+||+
T Consensus       139 LaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGIT  214 (948)
T KOG0577|consen  139 LAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT  214 (948)
T ss_pred             HHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc----hhcccCCccccchhHheeccccccCCccceeeccch
Confidence            3466665  9999999999999999999999998877653    34578999999999875   5789999999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ..|+..+++|
T Consensus       215 CIELAERkPP  224 (948)
T KOG0577|consen  215 CIELAERKPP  224 (948)
T ss_pred             hhhhhhcCCC
Confidence            9999999999

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=6.1e-21  Score=155.83  Aligned_cols=78  Identities=27%  Similarity=0.328  Sum_probs=67.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccc-cCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +|||+||+|++++.+-..|++|||+++.....  ....+.-..|.+|.|||.+. ...++...||||.||++.||++|+.
T Consensus       147 iHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkp  226 (359)
T KOG0660|consen  147 IHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKP  226 (359)
T ss_pred             cccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCC
Confidence            99999999999999999999999999987542  23335557799999999875 5678999999999999999999996


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      -
T Consensus       227 l  227 (359)
T KOG0660|consen  227 L  227 (359)
T ss_pred             C
Confidence            4

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=1.7e-20  Score=146.03  Aligned_cols=76  Identities=29%  Similarity=0.338  Sum_probs=69.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      |||||||+|+|++..+..|++|||.+...+  .....+.+||.-|.+||.......+...|+|++|++.+|++.|.+|
T Consensus       146 IhRdiKpenlLlg~~~~lkiAdfGwsV~~p--~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~pp  221 (281)
T KOG0580|consen  146 IHRDIKPENLLLGSAGELKIADFGWSVHAP--SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPP  221 (281)
T ss_pred             ccCCCCHHHhccCCCCCeeccCCCceeecC--CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999999887655  2344568999999999999988889999999999999999999999

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.82  E-value=9.7e-21  Score=161.83  Aligned_cols=84  Identities=23%  Similarity=0.156  Sum_probs=71.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .|||..  +||||||+|||++.++.++|+|||++.......  .......||..|+|||.+....++.++||||+||++|
T Consensus       199 ~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~  278 (392)
T PHA03207        199 AYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLF  278 (392)
T ss_pred             HHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHH
Confidence            344444  999999999999999999999999987655431  1223457899999999998888999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       279 el~~g~~p  286 (392)
T PHA03207        279 EMSVKNVT  286 (392)
T ss_pred             HHHHCCCC
Confidence            99999998

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.82  E-value=9.9e-21  Score=156.36  Aligned_cols=84  Identities=15%  Similarity=0.190  Sum_probs=68.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.............++..|+|||.+.. ..++.++||||+|++++|
T Consensus       118 ~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  197 (309)
T cd07872         118 AYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFE  197 (309)
T ss_pred             HHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            344444  99999999999999999999999998765433222233457889999998764 457899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |+||+.|
T Consensus       198 l~tg~~p  204 (309)
T cd07872         198 MASGRPL  204 (309)
T ss_pred             HHhCCCC
Confidence            9999988

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.82  E-value=4.5e-20  Score=150.26  Aligned_cols=82  Identities=20%  Similarity=0.252  Sum_probs=70.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +++|+.  +|+||||+||+++.++.++|+|||++......  ......++..|+|||.+....++.++|+||||++++++
T Consensus       109 ~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l  186 (279)
T cd06619         109 TYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMEL  186 (279)
T ss_pred             HHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHH
Confidence            455554  99999999999999999999999998765433  22334678899999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       187 ~~g~~p  192 (279)
T cd06619         187 ALGRFP  192 (279)
T ss_pred             HhCCCC
Confidence            999999

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.82  E-value=3.6e-20  Score=149.49  Aligned_cols=111  Identities=15%  Similarity=0.181  Sum_probs=79.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +|+||||+||++++++.++++|||++........  ......++..|+|||.+....++.++||||||++++|+++ |..
T Consensus       128 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~  207 (266)
T cd05033         128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGER  207 (266)
T ss_pred             ccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCC
Confidence            9999999999999999999999999987652211  1112234567999999988888999999999999999998 988


Q ss_pred             Ccc-----cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH-----FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~-----~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..     .+.+.+.....    .  .........+.++...|++
T Consensus       208 p~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~l~~li~~cl~  246 (266)
T cd05033         208 PYWDMSNQDVIKAVEDGYR----L--PPPMDCPSALYQLMLDCWQ  246 (266)
T ss_pred             CCCCCCHHHHHHHHHcCCC----C--CCCCCCCHHHHHHHHHHcC
Confidence            821     22222221111    1  1123344577788888876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.82  E-value=3e-20  Score=150.11  Aligned_cols=113  Identities=18%  Similarity=0.195  Sum_probs=78.8

Q ss_pred             hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccccCC--cCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK--VAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++. .+.++++|||++..............++..|+|||++....  ++.++|+||||++++++++|+.
T Consensus       130 ~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~  209 (268)
T cd06624         130 VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKP  209 (268)
T ss_pred             eecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCC
Confidence            99999999999986 67999999999876543322233345788999999886543  6789999999999999999999


Q ss_pred             CcccH-----HHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRHFI-----FSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~~l-----~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |....     ..|......    ....++..+...+..+..+|++
T Consensus       210 p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~  250 (268)
T cd06624         210 PFIELGEPQAAMFKVGMFK----IHPEIPESLSAEAKNFILRCFE  250 (268)
T ss_pred             CCccccChhhhHhhhhhhc----cCCCCCcccCHHHHHHHHHHcC
Confidence            93211     111111111    1222344455567777777764

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.82  E-value=3.6e-20  Score=152.32  Aligned_cols=78  Identities=27%  Similarity=0.411  Sum_probs=67.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||++..............++..|+|||.+.....+.++||||||++++|+++|+.|
T Consensus       138 ~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~p  215 (296)
T cd06654         138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP  215 (296)
T ss_pred             ccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999887654432223344678899999998888888999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=4.3e-21  Score=161.45  Aligned_cols=76  Identities=20%  Similarity=0.160  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +|||+||+|||+.....+||+|||+++.+.... ..+.-..|.+|.|||++. .+.++.+.|||++||+++|+.+-++
T Consensus       132 FHRDlKPENiLi~~~~~iKiaDFGLARev~Skp-PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrP  208 (538)
T KOG0661|consen  132 FHRDLKPENILISGNDVIKIADFGLAREVRSKP-PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRP  208 (538)
T ss_pred             ccccCChhheEecccceeEecccccccccccCC-CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999886543 344557799999999764 7889999999999999999988775

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.82  E-value=1.6e-20  Score=158.14  Aligned_cols=86  Identities=20%  Similarity=0.210  Sum_probs=71.6

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-----CCCccccccccccccccccccCC----cCcccc
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-----SSNRTELAGTYGYIALELTYTLK----VAKKCG  151 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~----~~~~~D  151 (208)
                      -.+|||.+  |||||||+|+|+++++++||+|||.+......     ........||+.|+|||....+.    .+.+.|
T Consensus       222 GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~D  301 (576)
T KOG0585|consen  222 GLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALD  301 (576)
T ss_pred             HHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhh
Confidence            45677776  99999999999999999999999999876432     11223468999999999887632    358889


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      |||+||+||-++.|+.|
T Consensus       302 iWalGVTLYCllfG~~P  318 (576)
T KOG0585|consen  302 IWALGVTLYCLLFGQLP  318 (576)
T ss_pred             hhhhhhhHHHhhhccCC
Confidence            99999999999999999

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.82  E-value=1.8e-20  Score=152.59  Aligned_cols=114  Identities=12%  Similarity=0.068  Sum_probs=82.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||+++......  .......+++.|+|||.+..+.++.++||||+|++++|+++ |..
T Consensus       146 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~  225 (283)
T cd05091         146 VHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ  225 (283)
T ss_pred             cccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999987654321  11122345678999999988888999999999999999998 777


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  .....++........  . ..+.......+..+...|++
T Consensus       226 p~~~~~~~~~~~~i~~~~--~-~~~~~~~~~~~~~li~~cl~  264 (283)
T cd05091         226 PYCGYSNQDVIEMIRNRQ--V-LPCPDDCPAWVYTLMLECWN  264 (283)
T ss_pred             CCCCCCHHHHHHHHHcCC--c-CCCCCCCCHHHHHHHHHHhC
Confidence            7  222333443333222  1 12233455577788888875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.82  E-value=2.6e-20  Score=151.30  Aligned_cols=114  Identities=10%  Similarity=0.002  Sum_probs=79.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.++++|||+++.......  ......++..|+|||.+....++.++||||||++++|+++ |..
T Consensus       141 vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~  220 (277)
T cd05062         141 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ  220 (277)
T ss_pred             ccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999875543211  1112234678999999988888999999999999999999 677


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  .....+...... +.. .. .........+..+..+|++
T Consensus       221 p~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~li~~~l~  259 (277)
T cd05062         221 PYQGMSNEQVLRFVM-EGG-LL-DKPDNCPDMLFELMRMCWQ  259 (277)
T ss_pred             CCCCCCHHHHHHHHH-cCC-cC-CCCCCCCHHHHHHHHHHcC
Confidence            7  222222222221 111 11 1123344567778888875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.82  E-value=4e-20  Score=152.35  Aligned_cols=117  Identities=11%  Similarity=0.107  Sum_probs=81.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc--CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK--GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~  166 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......++..|+|||.+....++.++||||||++++|+++  +.
T Consensus       160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~  239 (304)
T cd05096         160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE  239 (304)
T ss_pred             cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence            9999999999999999999999999876543211  1122345678999999888889999999999999999986  44


Q ss_pred             CCc-----ccHHHHHHhhcCCCC-CCccccCCCCCchHHHHhccccC
Q 039937          167 HPR-----HFIFSICSSSSNFVI-APHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~-----~~l~~~~~~~~~~~~-~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|.     ..+..++........ .......+.....+.++..+|++
T Consensus       240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  286 (304)
T cd05096         240 QPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWS  286 (304)
T ss_pred             CCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHcc
Confidence            552     222333333222211 01122234455577888888875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.82  E-value=6.6e-20  Score=147.52  Aligned_cols=115  Identities=17%  Similarity=0.207  Sum_probs=82.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCc-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR-  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~-  169 (208)
                      +||||+|+||+++.++.++++|||++..............++..|+|||.+....++.++|+||||++++++++|+.|. 
T Consensus       128 ~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  207 (267)
T cd08224         128 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY  207 (267)
T ss_pred             ecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcc
Confidence            9999999999999999999999999886654433333456788999999988888899999999999999999999982 


Q ss_pred             ---ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 ---HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 ---~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                         ..+.++...... .. ......+........+...|++
T Consensus       208 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~i~~cl~  246 (267)
T cd08224         208 GDKMNLYSLCKKIEK-CD-YPPLPADHYSEELRDLVSRCIN  246 (267)
T ss_pred             cCCccHHHHHhhhhc-CC-CCCCChhhcCHHHHHHHHHHcC
Confidence               122233222221 11 2222222344456666666754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.82  E-value=2.4e-20  Score=156.31  Aligned_cols=80  Identities=24%  Similarity=0.313  Sum_probs=67.6

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el  162 (208)
                      |||..  +||||||+||+++.++.+||+|||+++.....   .....++..|+|||.+.. ..++.++||||+|++++||
T Consensus       133 ~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  209 (343)
T cd07878         133 YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL  209 (343)
T ss_pred             HHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHH
Confidence            44443  99999999999999999999999999875432   223467899999998865 4678999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       210 ~~g~~p  215 (343)
T cd07878         210 LKGKAL  215 (343)
T ss_pred             HHCCCC
Confidence            999988

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.82  E-value=1.3e-20  Score=164.07  Aligned_cols=83  Identities=22%  Similarity=0.153  Sum_probs=69.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      |||..  +||||||+|||++.++.+||+|||+++......  .......||..|+|||++....++.++|||||||++||
T Consensus       275 yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~E  354 (461)
T PHA03211        275 YIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE  354 (461)
T ss_pred             HHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence            44443  999999999999999999999999998764331  12234568999999999988889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|..|
T Consensus       355 l~~g~~~  361 (461)
T PHA03211        355 AAVHTAS  361 (461)
T ss_pred             HHHcCCC
Confidence            9988755

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.82  E-value=1.7e-20  Score=155.02  Aligned_cols=78  Identities=18%  Similarity=0.194  Sum_probs=65.1

Q ss_pred             hhcCcCCCceee----CCCCcEEEcccceeeeecCCC---CCcccccccccccccccccc-CCcCcccchHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLL----DLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        91 iH~dlk~~nill----d~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||||||+||++    +.++.+||+|||+++......   .......++..|+|||.+.. ..++.++||||+|++++|+
T Consensus       130 vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el  209 (317)
T cd07867         130 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL  209 (317)
T ss_pred             EcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHH
Confidence            999999999999    567899999999998765431   12234567899999998865 4578999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      +||+.|
T Consensus       210 ~tg~~~  215 (317)
T cd07867         210 LTSEPI  215 (317)
T ss_pred             HhCCCC
Confidence            999988

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PHA02988 hypothetical protein; Provisional

Probab=99.81  E-value=5.8e-20  Score=150.39  Aligned_cols=112  Identities=15%  Similarity=0.085  Sum_probs=82.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc--CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT--LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||+++......   ....++..|+|||.+..  ..++.++|||||||++||+++|+.|
T Consensus       145 ~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~P  221 (283)
T PHA02988        145 PYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIP  221 (283)
T ss_pred             CCCcCChhhEEECCCCcEEEcccchHhhhcccc---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCC
Confidence            899999999999999999999999987654321   22357889999999865  6789999999999999999999999


Q ss_pred             --cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 --RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 --~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        .....++........  ....++......+.++...|++
T Consensus       222 f~~~~~~~~~~~i~~~~--~~~~~~~~~~~~l~~li~~cl~  260 (283)
T PHA02988        222 FENLTTKEIYDLIINKN--NSLKLPLDCPLEIKCIVEACTS  260 (283)
T ss_pred             CCCCCHHHHHHHHHhcC--CCCCCCCcCcHHHHHHHHHHhc
Confidence              223333333332222  1122333455567777777875

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.81  E-value=4.2e-20  Score=148.93  Aligned_cols=78  Identities=21%  Similarity=0.230  Sum_probs=68.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||||+||+++.++.++++|||++..............++..|+|||......++.++|+||||++++|+++|+.|
T Consensus       128 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p  205 (267)
T cd08229         128 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP  205 (267)
T ss_pred             ecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987765443333344678899999999888889999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.81  E-value=5.9e-20  Score=147.48  Aligned_cols=114  Identities=18%  Similarity=0.147  Sum_probs=78.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+|++|||.++....... ......++..|+|||.+....++.++|+||||++++|+++ |+.|
T Consensus       122 ~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p  201 (256)
T cd05114         122 IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMP  201 (256)
T ss_pred             cccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCC
Confidence            9999999999999999999999998876543211 1122234567999999988888999999999999999999 8888


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ....+.+........ .  .........+..+..+|++
T Consensus       202 ~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~~~~li~~c~~  239 (256)
T cd05114         202 FEKKSNYEVVEMISRGFR-L--YRPKLASMTVYEVMYSCWH  239 (256)
T ss_pred             CCCCCHHHHHHHHHCCCC-C--CCCCCCCHHHHHHHHHHcc
Confidence            2  222233333222211 1  0111223366778888875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.81  E-value=1e-19  Score=145.81  Aligned_cols=120  Identities=17%  Similarity=0.136  Sum_probs=86.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .++|+.  +||||||+||+++.++.++++|||++..............++..|+|||......++.++|+||+|++++|+
T Consensus       116 ~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l  195 (257)
T cd08223         116 QYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEM  195 (257)
T ss_pred             HHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHH
Confidence            344444  999999999999999999999999998775433333345678899999999888889999999999999999


Q ss_pred             HcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+.|  ..+...+........  . ..+.......+.++...|++
T Consensus       196 ~~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~li~~~l~  239 (257)
T cd08223         196 ATLKHAFNAKDMNSLVYRIIEGK--L-PPMPKDYSPELGELIATMLS  239 (257)
T ss_pred             HcCCCCCCCCCHHHHHHHHHhcC--C-CCCccccCHHHHHHHHHHhc
Confidence            999998  333444443332221  1 11233444566666666654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.81  E-value=4.6e-20  Score=150.92  Aligned_cols=77  Identities=25%  Similarity=0.276  Sum_probs=67.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.++++|||++........ .....|+..|+|||.+....++.++|+||+|++++|+++|+.|
T Consensus       124 iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~P  200 (285)
T cd05630         124 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP  200 (285)
T ss_pred             EeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876543321 1234688999999999888899999999999999999999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.81  E-value=1e-20  Score=157.02  Aligned_cols=84  Identities=26%  Similarity=0.290  Sum_probs=71.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||..  +||||||+||+++.++.+||+|||+++.............|+..|+|||.+....++.++||||||++++||
T Consensus       112 ~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el  191 (318)
T cd05582         112 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM  191 (318)
T ss_pred             HHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeee
Confidence            344444  999999999999999999999999987654432233345789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       192 ~tg~~p  197 (318)
T cd05582         192 LTGSLP  197 (318)
T ss_pred             ccCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.81  E-value=5.9e-20  Score=148.13  Aligned_cols=114  Identities=17%  Similarity=0.141  Sum_probs=80.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||++++++.+|++|||++........ .......+..|++||.+....++.++||||||++++|+++ |..|
T Consensus       126 ~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p  205 (263)
T cd05052         126 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  205 (263)
T ss_pred             eecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence            9999999999999999999999999887654321 1112233567999999988888999999999999999998 8888


Q ss_pred             --cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 --RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 --~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        .....++.......   ............+..+...|++
T Consensus       206 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~  243 (263)
T cd05052         206 YPGIDLSQVYELLEKG---YRMERPEGCPPKVYELMRACWQ  243 (263)
T ss_pred             CCCCCHHHHHHHHHCC---CCCCCCCCCCHHHHHHHHHHcc
Confidence              22333333322221   1112233445567777777765

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.81  E-value=9.2e-20  Score=149.24  Aligned_cols=78  Identities=23%  Similarity=0.263  Sum_probs=64.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+||+++.++.++|+|||++..............++..|+|||++.     ...++.++|+||||+++||+++|
T Consensus       132 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g  211 (292)
T cd06644         132 IHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQI  211 (292)
T ss_pred             eecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcC
Confidence            9999999999999999999999998876443322223446788999999874     34467889999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       212 ~~p  214 (292)
T cd06644         212 EPP  214 (292)
T ss_pred             CCC
Confidence            999

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.81  E-value=6.3e-20  Score=149.39  Aligned_cols=122  Identities=19%  Similarity=0.243  Sum_probs=82.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gv  157 (208)
                      .+||+.  +||||||+||+++.++.+|++|||++..............++..|+|||.+.     ...++.++|+|||||
T Consensus       117 ~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv  196 (282)
T cd06643         117 NYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI  196 (282)
T ss_pred             HHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHH
Confidence            344444  9999999999999999999999999876543322233456788999999874     345678999999999


Q ss_pred             HHHHHHcCCCCcccH--HHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          158 LALEVMKGKHPRHFI--FSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       158 vl~elltg~~p~~~l--~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +++|+++|+.|....  .+.+........ .....+..+...+.++...|++
T Consensus       197 il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~  247 (282)
T cd06643         197 TLIEMAQIEPPHHELNPMRVLLKIAKSEP-PTLAQPSRWSSEFKDFLKKCLE  247 (282)
T ss_pred             HHHHHccCCCCccccCHHHHHHHHhhcCC-CCCCCccccCHHHHHHHHHHcc
Confidence            999999999983221  122222221111 1112233455567777777764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.81  E-value=4.8e-20  Score=150.18  Aligned_cols=114  Identities=12%  Similarity=0.119  Sum_probs=79.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||+++......  .......++..|+|||++....++.++||||||++++|+++ |..
T Consensus       146 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~  225 (283)
T cd05090         146 VHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQ  225 (283)
T ss_pred             ehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999997654321  11122344667999999888888999999999999999998 887


Q ss_pred             Ccc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..  .-.... +...... . ......+...+..+...|++
T Consensus       226 p~~~~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~li~~cl~  264 (283)
T cd05090         226 PYYGFSNQEVI-EMVRKRQ-L-LPCSEDCPPRMYSLMTECWQ  264 (283)
T ss_pred             CCCCCCHHHHH-HHHHcCC-c-CCCCCCCCHHHHHHHHHHcc
Confidence            721  111122 2221221 1 11233444566677777765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=1.8e-20  Score=162.69  Aligned_cols=86  Identities=24%  Similarity=0.279  Sum_probs=72.6

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSS  155 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~  155 (208)
                      ...|||++  ||||||..|||++.+|.++++|||++............+.||++|||||+..     ...|+.++|||||
T Consensus       142 ALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSl  221 (1187)
T KOG0579|consen  142 ALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSL  221 (1187)
T ss_pred             HHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhh
Confidence            34566666  9999999999999999999999999865543333344678999999999764     5678999999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      |++|.||.-+.+|
T Consensus       222 GITLIEMAqiEPP  234 (1187)
T KOG0579|consen  222 GITLIEMAQIEPP  234 (1187)
T ss_pred             hhHHHHHhccCCC
Confidence            9999999999999

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.81  E-value=4.7e-20  Score=150.78  Aligned_cols=78  Identities=26%  Similarity=0.337  Sum_probs=65.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-----CcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-----KVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+||+++.++.+|++|||++..............++..|++||.+...     .++.++|+||||++++|+++|
T Consensus       150 vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g  229 (291)
T cd06639         150 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG  229 (291)
T ss_pred             eccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence            999999999999999999999999987655432222334678899999987543     257899999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       230 ~~p  232 (291)
T cd06639         230 DPP  232 (291)
T ss_pred             CCC
Confidence            998

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=6.9e-20  Score=148.47  Aligned_cols=83  Identities=29%  Similarity=0.374  Sum_probs=71.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      ++|..  +|+||+|+||++++++.++++|||+++.............++..|++||.+....++.++||||||+++||++
T Consensus       113 ~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~  192 (274)
T cd06609         113 YLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELA  192 (274)
T ss_pred             HHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH
Confidence            44444  9999999999999999999999999987765433333456788999999998888999999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      ||+.|
T Consensus       193 tg~~p  197 (274)
T cd06609         193 KGEPP  197 (274)
T ss_pred             hCCCC
Confidence            99999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.81  E-value=7.9e-20  Score=148.84  Aligned_cols=83  Identities=27%  Similarity=0.279  Sum_probs=70.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +++|+.  +||||||+||+++.++.++++|||++....... ......++..|+|||.+....++.++||||+||+++|+
T Consensus       109 ~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el  187 (277)
T cd05607         109 LHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEM  187 (277)
T ss_pred             HHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHH
Confidence            455554  999999999999999999999999988765432 12234678899999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       188 ~~g~~p  193 (277)
T cd05607         188 VAGRTP  193 (277)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.81  E-value=2.8e-20  Score=151.72  Aligned_cols=77  Identities=22%  Similarity=0.228  Sum_probs=67.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||++....... ......++..|+|||.+....++.++||||+||+++||++|+.|
T Consensus       130 vH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~  206 (288)
T cd07863         130 VHRDLKPENILVTSGGQVKLADFGLARIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL  206 (288)
T ss_pred             ecCCCCHHHEEECCCCCEEECccCccccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcC
Confidence            999999999999999999999999988664332 12234678899999999888899999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.81  E-value=5.6e-20  Score=150.37  Aligned_cols=114  Identities=14%  Similarity=0.150  Sum_probs=79.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||+++.......  ......++..|++||.+....++.++||||||++++|+++ |+.
T Consensus       149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~  228 (290)
T cd05045         149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN  228 (290)
T ss_pred             ehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999876543211  1122344678999999888888999999999999999998 888


Q ss_pred             Ccc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..  ...++ .......  ............+..+...|++
T Consensus       229 p~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~i~~cl~  267 (290)
T cd05045         229 PYPGIAPERL-FNLLKTG--YRMERPENCSEEMYNLMLTCWK  267 (290)
T ss_pred             CCCCCCHHHH-HHHHhCC--CCCCCCCCCCHHHHHHHHHHcc
Confidence            721  11121 1222221  1111233445577788888875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.81  E-value=8.5e-21  Score=164.76  Aligned_cols=74  Identities=23%  Similarity=0.213  Sum_probs=63.2

Q ss_pred             hhcCcCCCceeeCCC--CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLE--YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~--~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      ||+||||+||||-+.  ..+||+|||.+.+......   .-.-+..|.|||++.+.+++.+.||||||||+.||.+|.+
T Consensus       311 IHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~P  386 (586)
T KOG0667|consen  311 IHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEP  386 (586)
T ss_pred             eeccCChhheeeccCCcCceeEEecccccccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcc
Confidence            999999999999643  4689999999987654321   2344788999999999999999999999999999999964

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.81  E-value=1.4e-20  Score=159.27  Aligned_cols=96  Identities=19%  Similarity=0.204  Sum_probs=81.7

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|+|.+  +|||||+.||+++.+..+|+.|||+++.+.+.........||+.||+||.+.+..++.|+|+||+||++||
T Consensus       119 v~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yE  198 (426)
T KOG0589|consen  119 VNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYE  198 (426)
T ss_pred             HHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHH
Confidence            4466654  99999999999999999999999999999887656667899999999999999999999999999999999


Q ss_pred             HHcCCCC--cccHHHHHHhh
Q 039937          162 VMKGKHP--RHFIFSICSSS  179 (208)
Q Consensus       162 lltg~~p--~~~l~~~~~~~  179 (208)
                      +.+-+++  ..++...+.+.
T Consensus       199 m~~lk~aF~a~~m~~Li~ki  218 (426)
T KOG0589|consen  199 MCTLKPAFKASNMSELILKI  218 (426)
T ss_pred             HHhcccccCccchHHHHHHH
Confidence            9998887  33344444333

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=7.4e-20  Score=147.08  Aligned_cols=78  Identities=22%  Similarity=0.227  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||+|+||+++.++.++++|||+++.......   ......++..|+|||.+.....+.++||||+|++++|+++|+.
T Consensus       126 ~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  205 (263)
T cd06625         126 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKP  205 (263)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999876543211   1123457789999999988888999999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       206 p  206 (263)
T cd06625         206 P  206 (263)
T ss_pred             C
Confidence            9

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.81  E-value=8.2e-20  Score=147.45  Aligned_cols=114  Identities=17%  Similarity=0.197  Sum_probs=78.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-Cc--cccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NR--TELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||||+||+++.++.+|++|||++........ ..  .....+..|++||.+....++.++||||||+++||+++ |+
T Consensus       129 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~  208 (268)
T cd05063         129 VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGE  208 (268)
T ss_pred             eccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999876543211 11  11122457999999988888999999999999999997 99


Q ss_pred             CCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          167 HPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|.  ..-.++......... ...  .......+.++...|++
T Consensus       209 ~p~~~~~~~~~~~~i~~~~~-~~~--~~~~~~~~~~li~~c~~  248 (268)
T cd05063         209 RPYWDMSNHEVMKAINDGFR-LPA--PMDCPSAVYQLMLQCWQ  248 (268)
T ss_pred             CCCCcCCHHHHHHHHhcCCC-CCC--CCCCCHHHHHHHHHHcC
Confidence            992  222223222221111 111  11234577788888875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=8.1e-21  Score=166.19  Aligned_cols=85  Identities=22%  Similarity=0.262  Sum_probs=72.9

Q ss_pred             HHHhhhh--hhcCcCCCceeeC-CCCcEEEcccceeeeecCCCCCccccccccccccccccccC--CcCcccchHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL--KVAKKCGMHSSGLL  158 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~S~Gvv  158 (208)
                      .+|||++  +|||||-.|||++ -.|.+||+|||.++....-.....++.||..|||||.+..+  .++..+|||||||+
T Consensus       688 LkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT  767 (1226)
T KOG4279|consen  688 LKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCT  767 (1226)
T ss_pred             hhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccce
Confidence            3456655  9999999999997 47999999999998776555556678899999999999754  47789999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      +.||.||++|
T Consensus       768 ~vEMATGrPP  777 (1226)
T KOG4279|consen  768 MVEMATGRPP  777 (1226)
T ss_pred             eEeeccCCCC
Confidence            9999999999

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.81  E-value=7.1e-20  Score=149.74  Aligned_cols=114  Identities=13%  Similarity=0.094  Sum_probs=79.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||+++......  .......++..|+|||.+....++.++|+||||++++||++ |+.
T Consensus       142 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~  221 (288)
T cd05093         142 VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ  221 (288)
T ss_pred             eecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987654321  11122334678999999988888999999999999999998 888


Q ss_pred             Ccc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..  ...+..... .... . ...+......+..+...|++
T Consensus       222 p~~~~~~~~~~~~i-~~~~-~-~~~~~~~~~~l~~li~~~l~  260 (288)
T cd05093         222 PWYQLSNNEVIECI-TQGR-V-LQRPRTCPKEVYDLMLGCWQ  260 (288)
T ss_pred             CCCCCCHHHHHHHH-HcCC-c-CCCCCCCCHHHHHHHHHHcc
Confidence            822  222222222 2221 1 11223344567778877775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.81  E-value=7.9e-20  Score=148.90  Aligned_cols=78  Identities=26%  Similarity=0.340  Sum_probs=65.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-----CCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-----LKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+||+++.++.+|++|||++..............++..|+|||.+..     ..++.++||||+|++++|+++|
T Consensus       146 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g  225 (286)
T cd06638         146 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG  225 (286)
T ss_pred             cccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcC
Confidence            99999999999999999999999998876543222334468899999998752     4467899999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       226 ~~p  228 (286)
T cd06638         226 DPP  228 (286)
T ss_pred             CCC
Confidence            999

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.81  E-value=9.8e-21  Score=162.67  Aligned_cols=84  Identities=20%  Similarity=0.197  Sum_probs=67.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||.+  |||||.++|+|++.+..+|++|||+++.-...........-...|+|||.+..+.++.++|||||||++||+
T Consensus       276 ~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei  355 (474)
T KOG0194|consen  276 EYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI  355 (474)
T ss_pred             HHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEee
Confidence            344444  999999999999999999999999987643211111112345789999999999999999999999999999


Q ss_pred             Hc-CCCC
Q 039937          163 MK-GKHP  168 (208)
Q Consensus       163 lt-g~~p  168 (208)
                      .+ |..|
T Consensus       356 f~~g~~P  362 (474)
T KOG0194|consen  356 FENGAEP  362 (474)
T ss_pred             eccCCCC
Confidence            98 8888

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.81  E-value=1.4e-19  Score=148.69  Aligned_cols=113  Identities=15%  Similarity=0.119  Sum_probs=77.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCCc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~  169 (208)
                      +||||||+||++++++.+|++|||++......... .....+..|++||.+....++.++||||||++++||++ |+.|.
T Consensus       141 vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf  219 (297)
T cd05089         141 IHRDLAARNVLVGENLASKIADFGLSRGEEVYVKK-TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPY  219 (297)
T ss_pred             ccCcCCcceEEECCCCeEEECCcCCCccccceecc-CCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999988643221111 11122457999999988888999999999999999997 98882


Q ss_pred             --ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 --HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 --~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        ....++.......   ........+...+..+...|++
T Consensus       220 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~  256 (297)
T cd05089         220 CGMTCAELYEKLPQG---YRMEKPRNCDDEVYELMRQCWR  256 (297)
T ss_pred             CCCCHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHcC
Confidence              2333333332221   1112223344566677777765

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=3.6e-20  Score=156.45  Aligned_cols=82  Identities=22%  Similarity=0.194  Sum_probs=67.6

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      |||..  +||||||+||+++.++.+||+|||+++..... .......|+..|+|||.+....++.++|||||||++||++
T Consensus       172 ~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell  250 (357)
T PHA03209        172 YLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML  250 (357)
T ss_pred             HHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence            44443  99999999999999999999999998753322 1223456899999999998888999999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      ++..|
T Consensus       251 ~~~~~  255 (357)
T PHA03209        251 AYPST  255 (357)
T ss_pred             HcCCc
Confidence            86554

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.81  E-value=9.2e-20  Score=149.96  Aligned_cols=83  Identities=27%  Similarity=0.416  Sum_probs=70.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||+.  +|+||||+||+++.++.+|++|||++..............++..|+|||.+....++.++|+||||+++++++
T Consensus       130 ~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ll  209 (296)
T cd06655         130 FLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV  209 (296)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHH
Confidence            44443  9999999999999999999999999876554433333456788999999998888899999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       210 tg~~p  214 (296)
T cd06655         210 EGEPP  214 (296)
T ss_pred             hCCCC
Confidence            99999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.81  E-value=1e-19  Score=147.09  Aligned_cols=120  Identities=17%  Similarity=0.119  Sum_probs=83.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .|+|..  +||||||+||+++.++.+|++|||+++.......  ......++..|++||......++.++||||||++++
T Consensus       126 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~  205 (272)
T cd05075         126 EYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMW  205 (272)
T ss_pred             HHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHH
Confidence            456655  9999999999999999999999999987643311  112224566799999998888899999999999999


Q ss_pred             HHHc-CCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+++ |+.|..  ...+... ...... .. ...+.......++...|++
T Consensus       206 el~~~g~~p~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~li~~~l~  252 (272)
T cd05075         206 EIATRGQTPYPGVENSEIYD-YLRQGN-RL-KQPPDCLDGLYSLMSSCWL  252 (272)
T ss_pred             HHHcCCCCCCCCCCHHHHHH-HHHcCC-CC-CCCCCCCHHHHHHHHHHcC
Confidence            9999 777721  2222222 222221 11 1233455567778888875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.81  E-value=8.7e-20  Score=155.14  Aligned_cols=111  Identities=17%  Similarity=0.218  Sum_probs=78.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.+..+|++|||+++.......  ......++..|+|||.+....++.++||||||++++|+++ |+.
T Consensus       236 vH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~  315 (375)
T cd05104         236 IHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSS  315 (375)
T ss_pred             eccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999999987654321  1112234567999999988889999999999999999998 777


Q ss_pred             Ccc------cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH------FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~------~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..      .+.+++.....      .........++..+...|++
T Consensus       316 p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~  355 (375)
T cd05104         316 PYPGMPVDSKFYKMIKEGYR------MLSPECAPSEMYDIMKSCWD  355 (375)
T ss_pred             CCCCCCchHHHHHHHHhCcc------CCCCCCCCHHHHHHHHHHcc
Confidence            721      22222222111      11122233467778888875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.81  E-value=2.2e-19  Score=144.90  Aligned_cols=120  Identities=15%  Similarity=0.114  Sum_probs=81.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC--ccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN--RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .++|..  +||||||+||++++++.+|++|||+++........  ......+..|++||.+.....+.++||||||++++
T Consensus       127 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~  206 (273)
T cd05035         127 EYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW  206 (273)
T ss_pred             HHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHH
Confidence            455554  99999999999999999999999999876543211  11123456799999988888899999999999999


Q ss_pred             HHHc-CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+++ |..|.  ..-.++........  ... ........+.++...|++
T Consensus       207 el~~~g~~p~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~li~~~l~  253 (273)
T cd05035         207 EIATRGQTPYPGVENHEIYDYLRHGN--RLK-QPEDCLDELYDLMYSCWR  253 (273)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCC--CCC-CCcCCCHHHHHHHHHHcC
Confidence            9999 77772  12222222222111  111 122334467777777765

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.81  E-value=9.9e-20  Score=146.95  Aligned_cols=115  Identities=16%  Similarity=0.140  Sum_probs=79.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||++++++.++++|||.+........ ......++..|++||......++.++|+||||++++|++| |+.|
T Consensus       124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p  203 (262)
T cd05071         124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  203 (262)
T ss_pred             cccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            9999999999999999999999999987654321 1122345678999999888889999999999999999999 7777


Q ss_pred             cccH-HHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHFI-FSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~l-~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .... ...........  ......+.+...+.++...|++
T Consensus       204 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  241 (262)
T cd05071         204 YPGMVNREVLDQVERG--YRMPCPPECPESLHDLMCQCWR  241 (262)
T ss_pred             CCCCChHHHHHHHhcC--CCCCCccccCHHHHHHHHHHcc
Confidence            2111 11111111111  1111234455567777777765

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.80  E-value=3e-20  Score=150.91  Aligned_cols=79  Identities=27%  Similarity=0.321  Sum_probs=68.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~  169 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|++||++....++.++|+||||++++|+++|+.|.
T Consensus       123 vH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~  201 (277)
T cd06642         123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN  201 (277)
T ss_pred             eccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999876554322223345788999999998888899999999999999999999993

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=5.7e-20  Score=159.96  Aligned_cols=89  Identities=20%  Similarity=0.237  Sum_probs=76.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcC-cccchHHHHHHHHHHHcCCCC-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVA-KKCGMHSSGLLALEVMKGKHP-  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p-  168 (208)
                      +|||+||+|+|||.++..||+|||+|.+-.++ ....+-+|++.|.+||.+.+.+|. .++||||+||+|+.|+||+.| 
T Consensus       134 cHRDLKpENlLLd~~~nIKIADFGMAsLe~~g-klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPF  212 (786)
T KOG0588|consen  134 CHRDLKPENLLLDVKNNIKIADFGMASLEVPG-KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPF  212 (786)
T ss_pred             eeccCCchhhhhhcccCEeeeccceeecccCC-ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCC
Confidence            99999999999999999999999999876554 334556899999999999988875 999999999999999999999 


Q ss_pred             -cccHHHHHHhhc
Q 039937          169 -RHFIFSICSSSS  180 (208)
Q Consensus       169 -~~~l~~~~~~~~  180 (208)
                       ++++.....+.-
T Consensus       213 dDdNir~LLlKV~  225 (786)
T KOG0588|consen  213 DDDNIRVLLLKVQ  225 (786)
T ss_pred             CCccHHHHHHHHH
Confidence             666777665543

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=8.5e-20  Score=147.28  Aligned_cols=121  Identities=15%  Similarity=0.105  Sum_probs=84.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC---CCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .+||..  +|+||||+||+++.++.++++|||+++.....   ........++..|+|||.+.....+.++|+||||+++
T Consensus       120 ~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  199 (264)
T cd06653         120 SYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV  199 (264)
T ss_pred             HHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence            344444  99999999999999999999999998765322   1112234678899999999887888999999999999


Q ss_pred             HHHHcCCCCcccHHHH--HHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMKGKHPRHFIFSI--CSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~elltg~~p~~~l~~~--~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+++|+.|......+  +.......  ....+++.+...+..+-..|++
T Consensus       200 ~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~i~~~l~  247 (264)
T cd06653         200 VEMLTEKPPWAEYEAMAAIFKIATQP--TKPMLPDGVSDACRDFLKQIFV  247 (264)
T ss_pred             HHHHhCCCCCCccCHHHHHHHHHcCC--CCCCCCcccCHHHHHHHHHHhc
Confidence            9999999994322211  12222111  2334455555555555555543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.80  E-value=5.2e-20  Score=147.92  Aligned_cols=114  Identities=18%  Similarity=0.206  Sum_probs=80.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCCc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~  169 (208)
                      +|+||||+||++++++.+|++|||.+..............++..|++||.+....++.++|+||||++++++++ |+.|.
T Consensus       126 ~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~  205 (261)
T cd05148         126 IHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPY  205 (261)
T ss_pred             eccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999998776543222223345678999999888888999999999999999998 78882


Q ss_pred             --ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 --HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 --~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        ..-.+........   ............+.++..+|++
T Consensus       206 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~  242 (261)
T cd05148         206 PGMNNHEVYDQITAG---YRMPCPAKCPQEIYKIMLECWA  242 (261)
T ss_pred             CcCCHHHHHHHHHhC---CcCCCCCCCCHHHHHHHHHHcC
Confidence              2222222222211   1111223444577788888875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.80  E-value=9.7e-20  Score=150.15  Aligned_cols=84  Identities=23%  Similarity=0.320  Sum_probs=67.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .|||..  +||||||+||+++.++.+|++|||+++.......  ......++..|++||.+....++.++||||||+++|
T Consensus       123 ~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~  202 (303)
T cd05110         123 MYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIW  202 (303)
T ss_pred             HHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHH
Confidence            344444  9999999999999999999999999986643321  112233467899999998888899999999999999


Q ss_pred             HHHc-CCCC
Q 039937          161 EVMK-GKHP  168 (208)
Q Consensus       161 ellt-g~~p  168 (208)
                      |+++ |+.|
T Consensus       203 el~t~g~~p  211 (303)
T cd05110         203 ELMTFGGKP  211 (303)
T ss_pred             HHHhCCCCC
Confidence            9997 8888

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.80  E-value=1.3e-19  Score=145.74  Aligned_cols=114  Identities=16%  Similarity=0.101  Sum_probs=79.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||++++++.++++|||++...... ........++..|++||.+.....+.++|+||||++++|+++ |+.|
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p  203 (260)
T cd05067         124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIP  203 (260)
T ss_pred             ecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999998776532 111222345678999999888888999999999999999999 8888


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ..-.+..... ...  ...........++.++..+|++
T Consensus       204 ~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05067         204 YPGMTNPEVIQNL-ERG--YRMPRPDNCPEELYELMRLCWK  241 (260)
T ss_pred             CCCCChHHHHHHH-HcC--CCCCCCCCCCHHHHHHHHHHcc
Confidence            2  2222222221 111  1111223344567777777764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.80  E-value=3.4e-20  Score=155.13  Aligned_cols=82  Identities=22%  Similarity=0.301  Sum_probs=69.2

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .|||+.   +||||||+||+++.++.+|++|||++......  ......++..|+|||.+....++.++|||||||+++|
T Consensus       117 ~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~  194 (333)
T cd06650         117 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE  194 (333)
T ss_pred             HHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence            455542   89999999999999999999999998765432  1223467889999999988888999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       195 l~~g~~p  201 (333)
T cd06650         195 MAIGRYP  201 (333)
T ss_pred             HHHCCCC
Confidence            9999998

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.80  E-value=8.9e-20  Score=149.35  Aligned_cols=114  Identities=14%  Similarity=0.114  Sum_probs=80.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.++++|||++.......  .......++..|+|||.+....++.++||||||++++||+| |+.
T Consensus       145 ~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  224 (291)
T cd05094         145 VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ  224 (291)
T ss_pred             eecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987654321  11223345778999999988888999999999999999999 998


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+... .+.... ..+ ........+.++...|++
T Consensus       225 p~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~li~~~l~  263 (291)
T cd05094         225 PWFQLSNTEVIE-CITQGR-VLE-RPRVCPKEVYDIMLGCWQ  263 (291)
T ss_pred             CCCCCCHHHHHH-HHhCCC-CCC-CCccCCHHHHHHHHHHcc
Confidence            82  22222222 222221 211 122344567778888875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.80  E-value=1.9e-19  Score=144.75  Aligned_cols=120  Identities=21%  Similarity=0.210  Sum_probs=82.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----CCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      .+||..  +||||||+||++++++.+|++|||+++......    .......++..|+|||.+....++.++||||||++
T Consensus       112 ~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  191 (262)
T cd05058         112 EYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL  191 (262)
T ss_pred             HHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHH
Confidence            445544  999999999999999999999999987654321    11122345668999999888888999999999999


Q ss_pred             HHHHHcCCCC---cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          159 ALEVMKGKHP---RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       159 l~elltg~~p---~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+++|..|   .....+..........   ...+..+...+..+...|++
T Consensus       192 l~el~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~  240 (262)
T cd05058         192 LWELMTRGAPPYPDVDSFDITVYLLQGRR---LLQPEYCPDPLYEVMLSCWH  240 (262)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHhcCCC---CCCCCcCCHHHHHHHHHHcC
Confidence            9999996544   2223333333322211   11123344567778888875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.80  E-value=1.7e-19  Score=144.81  Aligned_cols=111  Identities=18%  Similarity=0.156  Sum_probs=79.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP-  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p-  168 (208)
                      +||||||+||++++++.+|++|||+++......   .....+..|+|||......++.++||||||++++|+++ |+.| 
T Consensus       124 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~  200 (256)
T cd05082         124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  200 (256)
T ss_pred             eccccchheEEEcCCCcEEecCCccceeccccC---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999999987654322   12234568999999988888999999999999999997 8888 


Q ss_pred             -cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 -RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 -~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                       ...+.+........   ......+.+...+..+...|++
T Consensus       201 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~  237 (256)
T cd05082         201 PRIPLKDVVPRVEKG---YKMDAPDGCPPVVYDVMKQCWH  237 (256)
T ss_pred             CCCCHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHhc
Confidence             23344443332221   1112223444566666667764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.80  E-value=1.7e-19  Score=145.08  Aligned_cols=78  Identities=23%  Similarity=0.271  Sum_probs=65.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||++++++.++++|||++....... .......++..|+|||.......+.++|+||||++++|+++ |+.|
T Consensus       124 ~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p  203 (260)
T cd05070         124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP  203 (260)
T ss_pred             ccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999998765431 11112234567999999888888999999999999999999 7777

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.80  E-value=7.7e-20  Score=148.78  Aligned_cols=79  Identities=24%  Similarity=0.332  Sum_probs=65.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|+|||.+.     ...++.++|+||||++++|+++|
T Consensus       143 vH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g  222 (282)
T cd06636         143 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG  222 (282)
T ss_pred             ccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhC
Confidence            9999999999999999999999999876543222223456788999999875     34577899999999999999999


Q ss_pred             CCCc
Q 039937          166 KHPR  169 (208)
Q Consensus       166 ~~p~  169 (208)
                      +.|.
T Consensus       223 ~~p~  226 (282)
T cd06636         223 APPL  226 (282)
T ss_pred             CCCc
Confidence            9993

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.80  E-value=9e-20  Score=148.55  Aligned_cols=114  Identities=14%  Similarity=0.133  Sum_probs=79.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||++........  ......++..|+|||......++.++||||||++++|+++ |+.
T Consensus       144 ~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  223 (280)
T cd05092         144 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQ  223 (280)
T ss_pred             ecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999876543211  1122234678999999988888999999999999999998 888


Q ss_pred             CcccH--HHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRHFI--FSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~~l--~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |....  .+.........   ....+..+......+...|++
T Consensus       224 p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~  262 (280)
T cd05092         224 PWYQLSNTEAIECITQGR---ELERPRTCPPEVYAIMQGCWQ  262 (280)
T ss_pred             CCccCCHHHHHHHHHcCc---cCCCCCCCCHHHHHHHHHHcc
Confidence            83221  12222221111   111223445567777777764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.80  E-value=4.1e-20  Score=146.75  Aligned_cols=77  Identities=26%  Similarity=0.343  Sum_probs=68.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc------cCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY------TLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +|||+||+|||+|++...|++|||++..+.++. .....+||++|+|||.+.      ...++...|+|+.||+++.++.
T Consensus       145 VHRDLKpENILlddn~~i~isDFGFa~~l~~Ge-kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa  223 (411)
T KOG0599|consen  145 VHRDLKPENILLDDNMNIKISDFGFACQLEPGE-KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA  223 (411)
T ss_pred             hhcccChhheeeccccceEEeccceeeccCCch-hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc
Confidence            999999999999999999999999999887653 345679999999999875      2357788999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |.+|
T Consensus       224 GcpP  227 (411)
T KOG0599|consen  224 GCPP  227 (411)
T ss_pred             CCCc
Confidence            9999

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.80  E-value=6.2e-20  Score=143.72  Aligned_cols=89  Identities=20%  Similarity=0.249  Sum_probs=74.7

Q ss_pred             hhcCcCCCceeeC---CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLD---LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld---~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +|||+||+|++|-   ...-+|++|||++.... +........||++||+||.....+++..+|||+.||+++-++.|..
T Consensus       132 vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~  210 (355)
T KOG0033|consen  132 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP  210 (355)
T ss_pred             eeccCChhheeeeeccCCCceeecccceEEEeC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCC
Confidence            9999999999995   34567999999999988 5455567889999999999999999999999999999999999999


Q ss_pred             C-cc-cHHHHHHhhc
Q 039937          168 P-RH-FIFSICSSSS  180 (208)
Q Consensus       168 p-~~-~l~~~~~~~~  180 (208)
                      | ++ +-...-+...
T Consensus       211 PF~~~~~~rlye~I~  225 (355)
T KOG0033|consen  211 PFWDEDQHRLYEQIK  225 (355)
T ss_pred             CCCCccHHHHHHHHh
Confidence            9 33 4444444443

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.80  E-value=1.8e-19  Score=143.85  Aligned_cols=120  Identities=13%  Similarity=0.055  Sum_probs=82.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .++|..  +||||||+||+++.++.+|++|||++........ ......++..|+|||+.....++.++||||||++++|
T Consensus       107 ~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~  186 (250)
T cd05085         107 AYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWE  186 (250)
T ss_pred             HHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHH
Confidence            344443  9999999999999999999999999876543311 1112234567999999988888999999999999999


Q ss_pred             HHc-CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMK-GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 llt-g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +++ |..|.  ........ .....  ........+...+..+...|++
T Consensus       187 ~~~~g~~p~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~li~~~l~  232 (250)
T cd05085         187 TFSLGVCPYPGMTNQQARE-QVEKG--YRMSCPQKCPDDVYKVMQRCWD  232 (250)
T ss_pred             HhcCCCCCCCCCCHHHHHH-HHHcC--CCCCCCCCCCHHHHHHHHHHcc
Confidence            998 88882  22222222 22222  1112233455677788888875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.80  E-value=1.5e-19  Score=146.65  Aligned_cols=114  Identities=12%  Similarity=0.113  Sum_probs=81.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+|++|||++.......  .......++..|+|||.+....++.++||||+|++++|+++ |+.
T Consensus       144 ~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~  223 (280)
T cd05049         144 VHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQ  223 (280)
T ss_pred             eccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999987653321  11123345678999999988889999999999999999998 998


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+.+.... ..  .....+......+..+...|++
T Consensus       224 p~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~~~l~  262 (280)
T cd05049         224 PWYGLSNEEVIECIT-QG--RLLQRPRTCPSEVYDIMLGCWK  262 (280)
T ss_pred             CCCCCCHHHHHHHHH-cC--CcCCCCCCCCHHHHHHHHHHcC
Confidence            82  22222222222 22  1122233455567777777765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.80  E-value=1.1e-19  Score=149.59  Aligned_cols=78  Identities=27%  Similarity=0.407  Sum_probs=68.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.++++|||++..............++..|++||......++.++|+||||++++++++|+.|
T Consensus       137 ~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~p  214 (297)
T cd06656         137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP  214 (297)
T ss_pred             ccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999988765443333345678899999999888889999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.80  E-value=1.6e-19  Score=146.79  Aligned_cols=83  Identities=24%  Similarity=0.327  Sum_probs=67.1

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc----CCcCcccchHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT----LKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~S~Gv  157 (208)
                      +++|.+   +||||||+||+++.++.+|++|||++....... ......++..|+|||.+..    ..++.++|+||+|+
T Consensus       117 ~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~  195 (283)
T cd06617         117 EYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGI  195 (283)
T ss_pred             HHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-ccccccCCccccChhhcCCcccccccCccccchhhHH
Confidence            455543   999999999999999999999999987654321 1223457888999998753    44678999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++|+++|+.|
T Consensus       196 ~l~~l~~g~~p  206 (283)
T cd06617         196 TMIELATGRFP  206 (283)
T ss_pred             HHHHHHhCCCC
Confidence            99999999999

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=2.4e-20  Score=151.22  Aligned_cols=86  Identities=22%  Similarity=0.246  Sum_probs=77.3

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ...|||++  +.||+|.+|+|||.+|+.||.|||+++.--.......+.+||+.|+|||++....+....|.|.+|||+|
T Consensus       280 AL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMY  359 (516)
T KOG0690|consen  280 ALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMY  359 (516)
T ss_pred             HhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHH
Confidence            44577766  9999999999999999999999999987554455566789999999999999999999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+.|+.|
T Consensus       360 EMmCGRLP  367 (516)
T KOG0690|consen  360 EMMCGRLP  367 (516)
T ss_pred             HHHhccCc
Confidence            99999999

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.80  E-value=1.8e-19  Score=144.81  Aligned_cols=114  Identities=18%  Similarity=0.167  Sum_probs=78.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+|++|||+++....... ......++..|+|||.+....++.++|+||||++++|+++ |+.|
T Consensus       122 ~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p  201 (256)
T cd05059         122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMP  201 (256)
T ss_pred             ccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999999876643311 1112223457999999988888999999999999999999 7777


Q ss_pred             cc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..  .-.+...... ..  ...........++..+..+|++
T Consensus       202 ~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~~cl~  239 (256)
T cd05059         202 YERFSNSEVVESVS-AG--YRLYRPKLAPTEVYTIMYSCWH  239 (256)
T ss_pred             CCCCCHHHHHHHHH-cC--CcCCCCCCCCHHHHHHHHHHhc
Confidence            21  1112121111 11  1111122344577778877764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.79  E-value=1.9e-19  Score=145.33  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=67.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC---CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||+|+||+++.++.+|++|||+++.....   ........++..|+|||.+....++.++|+||+|++++|+++|+.
T Consensus       128 ~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~  207 (266)
T cd06651         128 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP  207 (266)
T ss_pred             eeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCC
Confidence            99999999999999999999999998765432   111223457889999999988888999999999999999999999


Q ss_pred             Cc
Q 039937          168 PR  169 (208)
Q Consensus       168 p~  169 (208)
                      |.
T Consensus       208 pf  209 (266)
T cd06651         208 PW  209 (266)
T ss_pred             Cc
Confidence            93

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.79  E-value=2.2e-19  Score=143.66  Aligned_cols=78  Identities=28%  Similarity=0.368  Sum_probs=68.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||+|.||+++.++.++++|||++..............++..|++||.+.+..++.++||||||++++|+++|+.|
T Consensus       121 ~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p  198 (256)
T cd06612         121 IHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPP  198 (256)
T ss_pred             ccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999988765443223344578899999999888889999999999999999999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.79  E-value=1.8e-19  Score=146.41  Aligned_cols=114  Identities=22%  Similarity=0.246  Sum_probs=82.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCcc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRH  170 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~  170 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|++||.......+.++|+||||++++++++|+.|..
T Consensus       123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~  202 (277)
T cd06641         123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHS  202 (277)
T ss_pred             ecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999998766543222233467888999999888888899999999999999999999932


Q ss_pred             cH--HHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          171 FI--FSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       171 ~l--~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..  ..+... ....  ....++..+...+.++...|++
T Consensus       203 ~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~i~~~l~  238 (277)
T cd06641         203 ELHPMKVLFL-IPKN--NPPTLEGNYSKPLKEFVEACLN  238 (277)
T ss_pred             ccchHHHHHH-HhcC--CCCCCCcccCHHHHHHHHHHcc
Confidence            21  122222 1111  1222344555566777777764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=1.7e-19  Score=146.09  Aligned_cols=114  Identities=12%  Similarity=0.050  Sum_probs=79.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+|++|||+++......  .......++..|+|||.+.....+.++||||||++++|+++ |+.
T Consensus       141 ~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  220 (277)
T cd05032         141 VHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQ  220 (277)
T ss_pred             cccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCC
Confidence            999999999999999999999999987654331  11223345778999999888888999999999999999998 888


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+...... ... ... ........+..+...|++
T Consensus       221 p~~~~~~~~~~~~~~-~~~-~~~-~~~~~~~~~~~li~~~l~  259 (277)
T cd05032         221 PYQGLSNEEVLKFVI-DGG-HLD-LPENCPDKLLELMRMCWQ  259 (277)
T ss_pred             CCccCCHHHHHHHHh-cCC-CCC-CCCCCCHHHHHHHHHHcC
Confidence            72  22222222221 221 111 122234567777777765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.79  E-value=1.3e-19  Score=145.74  Aligned_cols=120  Identities=21%  Similarity=0.186  Sum_probs=82.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC---ccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      +++|..  +||||||.||+++.++.+|++|||+++........   .....++..|+|||.+.....+.++|+||||+++
T Consensus       109 ~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  188 (257)
T cd05116         109 KYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLM  188 (257)
T ss_pred             HHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHH
Confidence            344444  99999999999999999999999998876543211   1112235689999998878888999999999999


Q ss_pred             HHHHc-CCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMK-GKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~ellt-g~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+++ |+.|..  ...++.... .... . ....+.+...+.++...|++
T Consensus       189 ~el~t~g~~p~~~~~~~~~~~~i-~~~~-~-~~~~~~~~~~l~~li~~~~~  236 (257)
T cd05116         189 WEAFSYGQKPYKGMKGNEVTQMI-ESGE-R-MECPQRCPPEMYDLMKLCWT  236 (257)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHH-HCCC-C-CCCCCCCCHHHHHHHHHHhc
Confidence            99998 898832  222222222 1211 1 11233445566777777764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.79  E-value=1.1e-19  Score=146.63  Aligned_cols=83  Identities=20%  Similarity=0.289  Sum_probs=68.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ++|..  +|+||||+||+++.++.++++|||++..............|+..|+|||.+.   ...++.++|+||+|++++
T Consensus       121 ~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~  200 (267)
T cd06645         121 YLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAI  200 (267)
T ss_pred             HHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHH
Confidence            44443  9999999999999999999999999876654332333456889999999874   445788999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      |+++|+.|
T Consensus       201 ~l~~~~~p  208 (267)
T cd06645         201 ELAELQPP  208 (267)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.79  E-value=1.6e-19  Score=144.70  Aligned_cols=78  Identities=24%  Similarity=0.286  Sum_probs=68.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||||+||++++++.++++|||.+..............++..|+|||.......+.++|+||||++++++++|+.|
T Consensus       122 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p  199 (255)
T cd08219         122 LHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHP  199 (255)
T ss_pred             ccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCC
Confidence            999999999999999999999999987765443333345678889999999888889999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.79  E-value=1.3e-19  Score=147.34  Aligned_cols=78  Identities=27%  Similarity=0.340  Sum_probs=68.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|+|||.+....++.++|+||||++++|+++|+.|
T Consensus       123 vH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p  200 (277)
T cd06640         123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP  200 (277)
T ss_pred             cCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCC
Confidence            999999999999999999999999997765443333344678889999999888889999999999999999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.79  E-value=8.9e-20  Score=158.16  Aligned_cols=114  Identities=15%  Similarity=0.109  Sum_probs=84.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcc-ccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRT-ELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      |||||...|.|+.++..+|++|||+++++..++-... ...-.+.|.|||.+....++.|+|||+|||+|||+.| |..|
T Consensus       387 IHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsP  466 (1157)
T KOG4278|consen  387 IHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP  466 (1157)
T ss_pred             hhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999999987632111 1122467999999999999999999999999999997 8887


Q ss_pred             --cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 --RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 --~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        +.++.+-- ..+.++  ..+--..-....+.++...|++
T Consensus       467 YPGidlSqVY-~LLEkg--yRM~~PeGCPpkVYeLMraCW~  504 (1157)
T KOG4278|consen  467 YPGIDLSQVY-GLLEKG--YRMDGPEGCPPKVYELMRACWN  504 (1157)
T ss_pred             CCCccHHHHH-HHHhcc--ccccCCCCCCHHHHHHHHHHhc
Confidence              44554432 222222  2222233344477778778865

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.79  E-value=3e-19  Score=146.14  Aligned_cols=117  Identities=13%  Similarity=0.144  Sum_probs=81.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc--CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK--GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~  166 (208)
                      +||||||+||+++.++.++++|||+++......  .......++..|+|||.+....++.++||||||++++|+++  |.
T Consensus       152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~  231 (296)
T cd05051         152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCRE  231 (296)
T ss_pred             cccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCC
Confidence            999999999999999999999999987654331  11223345678999999888888999999999999999998  55


Q ss_pred             CCc-----ccHHHHHHhhcCCCCC-CccccCCCCCchHHHHhccccC
Q 039937          167 HPR-----HFIFSICSSSSNFVIA-PHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~-----~~l~~~~~~~~~~~~~-~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|.     ..+...+......... ......+....++.++...|++
T Consensus       232 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  278 (296)
T cd05051         232 QPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWR  278 (296)
T ss_pred             CCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhc
Confidence            551     1222233322222110 1111123334578889998876

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.79  E-value=1.3e-19  Score=147.23  Aligned_cols=114  Identities=18%  Similarity=0.090  Sum_probs=78.5

Q ss_pred             hhcCcCCCceeeCCCC---cEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-
Q 039937           91 ISFTTSSKNGLLDLEY---EARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~---~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-  164 (208)
                      +||||||+||+++.++   .+|++|||+++.......  .......+..|+|||++....++.++|||||||+++|+++ 
T Consensus       138 vH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~  217 (277)
T cd05036         138 IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL  217 (277)
T ss_pred             eecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcC
Confidence            9999999999998654   689999999886633211  1112233467999999988889999999999999999997 


Q ss_pred             CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          165 GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       165 g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+.|.  ...............   ....+.+..++.++...|++
T Consensus       218 g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~cl~  259 (277)
T cd05036         218 GYMPYPGRTNQEVMEFVTGGGR---LDPPKGCPGPVYRIMTDCWQ  259 (277)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcC
Confidence            88882  222222222222111   11234455677788888875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.79  E-value=2.7e-19  Score=143.41  Aligned_cols=113  Identities=20%  Similarity=0.259  Sum_probs=80.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +|+||||+||+++.++.++++|||++....... .......++.+|+|||.+....++.++||||+|++++|+++ |+.|
T Consensus       122 ~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p  201 (256)
T cd05112         122 IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTP  201 (256)
T ss_pred             cccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999987654331 11122334578999999988888999999999999999998 8888


Q ss_pred             --cccHHHHHHhhcCCCCCCccccCCC-CCchHHHHhccccC
Q 039937          169 --RHFIFSICSSSSNFVIAPHEILDPR-FQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 --~~~l~~~~~~~~~~~~~~~~~~D~~-l~~~~~~~~~~C~q  207 (208)
                        .......+.......    ...+++ ....+.++..+|++
T Consensus       202 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~l~  239 (256)
T cd05112         202 YENRSNSEVVETINAGF----RLYKPRLASQSVYELMQHCWK  239 (256)
T ss_pred             CCcCCHHHHHHHHhCCC----CCCCCCCCCHHHHHHHHHHcc
Confidence              223333333322111    111222 34577788888875

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.79  E-value=2e-19  Score=145.13  Aligned_cols=79  Identities=20%  Similarity=0.212  Sum_probs=67.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC---CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +|+||||+||+++.++.++++|||++......   ........++..|+|||.+....++.++|+||||++++|+++|+.
T Consensus       128 ~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~  207 (265)
T cd06652         128 VHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKP  207 (265)
T ss_pred             ecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCC
Confidence            99999999999999999999999988755322   111223457889999999888888999999999999999999999


Q ss_pred             Cc
Q 039937          168 PR  169 (208)
Q Consensus       168 p~  169 (208)
                      |.
T Consensus       208 p~  209 (265)
T cd06652         208 PW  209 (265)
T ss_pred             CC
Confidence            93

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.79  E-value=2.5e-19  Score=147.59  Aligned_cols=114  Identities=16%  Similarity=0.130  Sum_probs=80.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+|++|||+++.......  ......++..|+|||.+....++.++||||||++++|+++ |..
T Consensus       159 vH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~  238 (304)
T cd05101         159 IHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS  238 (304)
T ss_pred             eecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999987654311  1122234578999999988888999999999999999998 666


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  .....++........  . ..........+..+...|++
T Consensus       239 p~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~li~~cl~  277 (304)
T cd05101         239 PYPGIPVEELFKLLKEGH--R-MDKPANCTNELYMMMRDCWH  277 (304)
T ss_pred             CcccCCHHHHHHHHHcCC--c-CCCCCCCCHHHHHHHHHHcc
Confidence            6  223444433332221  1 11223444567777777765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.79  E-value=1.8e-19  Score=148.36  Aligned_cols=78  Identities=26%  Similarity=0.376  Sum_probs=67.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||++..............++..|+|||.+....++.++||||||++++|+++|+.|
T Consensus       139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p  216 (297)
T cd06659         139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPP  216 (297)
T ss_pred             ecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987554432223345678899999999888889999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.79  E-value=3e-19  Score=146.06  Aligned_cols=114  Identities=12%  Similarity=0.051  Sum_probs=78.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.++++|||+++.......  ......++..|++||.+....++.++|+||||++++|+++ |+.
T Consensus       141 ~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~  220 (288)
T cd05061         141 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ  220 (288)
T ss_pred             cCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876543211  1112234567999999988888999999999999999998 677


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....++........  .. -........+.++..+|++
T Consensus       221 p~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~li~~~l~  259 (288)
T cd05061         221 PYQGLSNEQVLKFVMDGG--YL-DQPDNCPERVTDLMRMCWQ  259 (288)
T ss_pred             CCCCCCHHHHHHHHHcCC--CC-CCCCCCCHHHHHHHHHHcC
Confidence            72  22222222222111  11 1122334467777777764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.79  E-value=1.9e-19  Score=144.97  Aligned_cols=78  Identities=22%  Similarity=0.273  Sum_probs=65.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +|+||||+||++++++.++++|||++....... .......++..|++||.......+.++|+||||++++|++| |+.|
T Consensus       124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p  203 (260)
T cd05069         124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP  203 (260)
T ss_pred             eecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999998764331 11122345678999999888888999999999999999999 8888

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.79  E-value=2.8e-19  Score=143.32  Aligned_cols=121  Identities=19%  Similarity=0.140  Sum_probs=89.0

Q ss_pred             HHHhh-----hh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHH
Q 039937           84 EKLLR-----QE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG  156 (208)
Q Consensus        84 ~~~Lh-----~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~G  156 (208)
                      ..++|     ..  +|+||+|+||+++.++.+|++|||++..............++..|++||.+....++.++|+||||
T Consensus       118 l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG  197 (265)
T cd08217         118 LYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLG  197 (265)
T ss_pred             HHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHH
Confidence            35667     43  899999999999999999999999988776543323345678899999999888889999999999


Q ss_pred             HHHHHHHcCCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          157 LLALEVMKGKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       157 vvl~elltg~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++++++++|+.|.  .+..++.+. ....  ....+.+.....+..+...|++
T Consensus       198 ~il~~l~~g~~p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~l~~~~l~  247 (265)
T cd08217         198 CLIYELCALSPPFTARNQLQLASK-IKEG--KFRRIPYRYSSELNEVIKSMLN  247 (265)
T ss_pred             HHHHHHHHCCCcccCcCHHHHHHH-HhcC--CCCCCccccCHHHHHHHHHHcc
Confidence            9999999999992  222222222 2222  2233445555677777777765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.79  E-value=3e-19  Score=144.25  Aligned_cols=120  Identities=18%  Similarity=0.227  Sum_probs=85.8

Q ss_pred             HHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||. .  +|+||+|.||+++.++.+|++|||.+....... ......++..|++||......++.++|+||||+++||
T Consensus       127 ~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~  205 (269)
T cd08528         127 RYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQ  205 (269)
T ss_pred             HHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHH
Confidence            45553 2  899999999999999999999999998765432 2334567889999999988888999999999999999


Q ss_pred             HHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 lltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +++|+.|  ...............  .....+........++..+|++
T Consensus       206 l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~  251 (269)
T cd08528         206 MCTLQPPFYSTNMLSLATKIVEAV--YEPLPEGMYSEDVTDVITSCLT  251 (269)
T ss_pred             HHhCCCcccccCHHHHHHHHhhcc--CCcCCcccCCHHHHHHHHHHCC
Confidence            9999999  222333333222211  2222222344566667777765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=3.9e-19  Score=145.83  Aligned_cols=117  Identities=12%  Similarity=0.114  Sum_probs=80.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc--CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK--GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~  166 (208)
                      +||||||+||+++.++.+|++|||++........  ......++..|+|||......++.++|+||||++++|+++  +.
T Consensus       151 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~  230 (295)
T cd05097         151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE  230 (295)
T ss_pred             eccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999876543211  1122334678999999888889999999999999999998  44


Q ss_pred             CCcc-----cHHHHHHhhcCCC-CCCccccCCCCCchHHHHhccccC
Q 039937          167 HPRH-----FIFSICSSSSNFV-IAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~~-----~l~~~~~~~~~~~-~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|..     .+.+.+....... ........+.....+.++..+|++
T Consensus       231 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  277 (295)
T cd05097         231 QPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWS  277 (295)
T ss_pred             CCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcC
Confidence            4521     1222222222111 102222344455688889999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.79  E-value=1.4e-19  Score=147.07  Aligned_cols=114  Identities=15%  Similarity=0.116  Sum_probs=79.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||+++.+.....  ......++..|+|||++....++.++||||||++++|+++ |+.
T Consensus       139 ~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~  218 (280)
T cd05043         139 IHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQT  218 (280)
T ss_pred             eecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCC
Confidence            9999999999999999999999999986543311  1122345677999999988888999999999999999999 998


Q ss_pred             Ccc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..  .-.++......... ..  ........+.++..+|++
T Consensus       219 p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~li~~~l~  257 (280)
T cd05043         219 PYVEIDPFEMAAYLKDGYR-LA--QPINCPDELFAVMACCWA  257 (280)
T ss_pred             CcCcCCHHHHHHHHHcCCC-CC--CCCcCCHHHHHHHHHHcC
Confidence            822  22222221111111 11  122344567777777764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.79  E-value=9.5e-20  Score=145.94  Aligned_cols=78  Identities=28%  Similarity=0.391  Sum_probs=68.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||||+||+++.++.++++|||.+..............++..|+|||... ....+.++|+||+|+++++|++|..|
T Consensus       120 ~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p  198 (260)
T PF00069_consen  120 VHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLP  198 (260)
T ss_dssp             EESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999886533333334556788999999988 78889999999999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.79  E-value=9.6e-20  Score=149.86  Aligned_cols=78  Identities=17%  Similarity=0.200  Sum_probs=65.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||||+||+++.++.+|++|||++..............++..|+|||.+.. ..++.++||||+|++++||++|+.|
T Consensus       126 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~  204 (301)
T cd07873         126 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPL  204 (301)
T ss_pred             eCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998765433222233456889999998764 3467899999999999999999988

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.79  E-value=1.3e-19  Score=148.24  Aligned_cols=114  Identities=15%  Similarity=0.118  Sum_probs=79.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+|++|||+++.......  ......++..|+|||......++.++||||||+++||+++ |..
T Consensus       154 vH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  233 (293)
T cd05053         154 IHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS  233 (293)
T ss_pred             cccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCC
Confidence            9999999999999999999999999987654311  1112234567999999888888999999999999999997 888


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+.... ....  ............+..+...|++
T Consensus       234 p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~li~~~l~  272 (293)
T cd05053         234 PYPGIPVEELFKL-LKEG--YRMEKPQNCTQELYHLMRDCWH  272 (293)
T ss_pred             CCCCCCHHHHHHH-HHcC--CcCCCCCCCCHHHHHHHHHHcc
Confidence            72  222222221 1111  1111233444567777777765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.79  E-value=4.2e-19  Score=146.40  Aligned_cols=121  Identities=17%  Similarity=0.118  Sum_probs=81.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC---------------CCCccccccccccccccccccCCcCc
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---------------SSNRTELAGTYGYIALELTYTLKVAK  148 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---------------~~~~~~~~g~~~y~aPE~~~~~~~~~  148 (208)
                      ++|..  +||||||+||+++.++.++++|||+++.....               ........++..|+|||.+....++.
T Consensus       116 ~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  195 (305)
T cd05609         116 YLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGK  195 (305)
T ss_pred             HHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCc
Confidence            44443  99999999999999999999999988642111               00111235678899999988888899


Q ss_pred             ccchHHHHHHHHHHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          149 KCGMHSSGLLALEVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       149 ~~Dv~S~Gvvl~elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+||||++++|+++|+.|  .....++......... .....+..+...+..+...|++
T Consensus       196 ~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~  255 (305)
T cd05609         196 PVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI-EWPEGDEALPADAQDLISRLLR  255 (305)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc-CCCCccccCCHHHHHHHHHHhc
Confidence            99999999999999999998  3333344433332211 1111122344456666666654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.79  E-value=1.3e-19  Score=148.15  Aligned_cols=78  Identities=17%  Similarity=0.220  Sum_probs=64.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||||+||+++.++.++|+|||+++.............++..|+|||.+.. ...+.++||||+|++++|+++|+.|
T Consensus       125 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  203 (291)
T cd07870         125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPA  203 (291)
T ss_pred             ccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998764433222233456889999998764 3467899999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.79  E-value=8.5e-20  Score=147.13  Aligned_cols=83  Identities=18%  Similarity=0.154  Sum_probs=68.8

Q ss_pred             Hhhhh--hhcCcCCCceeeCCC----CcEEEcccceeeeecCCC---CCcccccccccccccccccc-CCcCcccchHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLE----YEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYT-LKVAKKCGMHSS  155 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~----~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~  155 (208)
                      |||++  +||||||.|||+..+    |.+||+|+|+++.+....   .....+..|++|.|||.+.+ ..++...|||+.
T Consensus       147 YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAi  226 (438)
T KOG0666|consen  147 YLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAI  226 (438)
T ss_pred             HHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHH
Confidence            44444  999999999999877    999999999999887651   13345678999999998874 568899999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      ||++.||+|-++-
T Consensus       227 GCIfaElLtl~Pl  239 (438)
T KOG0666|consen  227 GCIFAELLTLEPL  239 (438)
T ss_pred             HHHHHHHHccCcc
Confidence            9999999987643

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.79  E-value=2.9e-19  Score=143.77  Aligned_cols=120  Identities=18%  Similarity=0.155  Sum_probs=81.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +|+||||+||+++.++.+|++|||.++....... ......++..|++||......++.++||||||++++|
T Consensus       114 ~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~  193 (256)
T cd05113         114 AYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWE  193 (256)
T ss_pred             HHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHH
Confidence            344443  9999999999999999999999999886544321 1112234567999999988888999999999999999


Q ss_pred             HHc-CCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMK-GKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 llt-g~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +++ |+.|..  .-.+..........   ............++...|++
T Consensus       194 l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~  239 (256)
T cd05113         194 VYSLGKMPYERFNNSETVEKVSQGLR---LYRPHLASEKVYAIMYSCWH  239 (256)
T ss_pred             HhcCCCCCcCcCCHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHcC
Confidence            998 888822  11222222222111   11122233567777778875

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.79  E-value=2.6e-19  Score=143.26  Aligned_cols=121  Identities=13%  Similarity=0.060  Sum_probs=80.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC--ccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN--RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+||..  +||||||+||+++.++.+|++|||++.........  ......+..|+|||.+..+.++.++||||+|++++
T Consensus       108 ~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~  187 (252)
T cd05084         108 EYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLW  187 (252)
T ss_pred             HHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHH
Confidence            455544  99999999999999999999999998754432111  11112245699999998888899999999999999


Q ss_pred             HHHc-CCCCcccHH-HHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHPRHFIF-SICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p~~~l~-~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+++ |..|...+. +.........  .....+......+.++...|++
T Consensus       188 e~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~  234 (252)
T cd05084         188 EAFSLGAVPYANLSNQQTREAIEQG--VRLPCPELCPDAVYRLMERCWE  234 (252)
T ss_pred             HHHhCCCCCccccCHHHHHHHHHcC--CCCCCcccCCHHHHHHHHHHcC
Confidence            9997 777732111 1112222111  1112233344566777777765

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.79  E-value=2.5e-19  Score=144.56  Aligned_cols=79  Identities=22%  Similarity=0.285  Sum_probs=65.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +|||++|.||+++.++.++++|||++..............++..|+|||.+.   ...++.++|+||||++++|+++|+.
T Consensus       128 ~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~  207 (267)
T cd06646         128 MHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQP  207 (267)
T ss_pred             cccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999987654322223456788999999874   3446789999999999999999999


Q ss_pred             Cc
Q 039937          168 PR  169 (208)
Q Consensus       168 p~  169 (208)
                      |.
T Consensus       208 p~  209 (267)
T cd06646         208 PM  209 (267)
T ss_pred             Cc
Confidence            83

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=3.6e-19  Score=143.05  Aligned_cols=78  Identities=23%  Similarity=0.307  Sum_probs=64.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +|+||||+||++++++.+|++|||.+....... ........+..|++||.+.....+.++|+||+|++++|+++ |+.|
T Consensus       125 ~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p  204 (261)
T cd05034         125 IHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVP  204 (261)
T ss_pred             ccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999987765321 11112234567999999988888999999999999999998 8888

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.79  E-value=4.1e-19  Score=142.98  Aligned_cols=111  Identities=16%  Similarity=0.166  Sum_probs=78.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +|+||||+||+++..+.+|++|||.+....... .......++..|++||++....++.++|+||||+++++++| |+.|
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p  203 (260)
T cd05073         124 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP  203 (260)
T ss_pred             cccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999987654331 11222345577999999988888999999999999999999 8888


Q ss_pred             cc-----cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RH-----FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~-----~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..     .+.++...    .  ...-........+..+..+|++
T Consensus       204 ~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~i~~~l~  241 (260)
T cd05073         204 YPGMSNPEVIRALER----G--YRMPRPENCPEELYNIMMRCWK  241 (260)
T ss_pred             CCCCCHHHHHHHHhC----C--CCCCCcccCCHHHHHHHHHHcc
Confidence            22     12222221    1  1111123444567777777764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.78  E-value=6.6e-19  Score=143.99  Aligned_cols=78  Identities=24%  Similarity=0.358  Sum_probs=67.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||+|+||+++.++.++++|||.+..............++..|+|||......++.++|+||||++++|+++|+.|
T Consensus       137 ~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p  214 (285)
T cd06648         137 IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPP  214 (285)
T ss_pred             ecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999877654432222334678899999998888889999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.78  E-value=3.5e-19  Score=146.93  Aligned_cols=77  Identities=22%  Similarity=0.270  Sum_probs=62.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+||+|||++........ ......+..|+|||.+....++.++||||||++++|++| |..|
T Consensus       146 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  223 (303)
T cd05088         146 IHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP  223 (303)
T ss_pred             cccccchheEEecCCCcEEeCccccCcccchhhh-cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCC
Confidence            9999999999999999999999998864321111 111223567999999887788899999999999999998 8888

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=8.8e-20  Score=154.91  Aligned_cols=85  Identities=25%  Similarity=0.300  Sum_probs=77.7

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..+|||.+  |.|||||+|.+||.+|.+|+.|||+++.+..+. ...+++||+.|+|||.+.....+...|.||+|++++
T Consensus       532 AfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~-KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~  610 (732)
T KOG0614|consen  532 AFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR-KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIY  610 (732)
T ss_pred             HHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC-ceeeecCCcccccchhhhccCcchhhHHHHHHHHHH
Confidence            67788887  999999999999999999999999999887653 346789999999999999888899999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|.+|
T Consensus       611 ELL~G~pP  618 (732)
T KOG0614|consen  611 ELLTGSPP  618 (732)
T ss_pred             HHHcCCCC
Confidence            99999999

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.78  E-value=6.2e-19  Score=141.58  Aligned_cols=83  Identities=23%  Similarity=0.237  Sum_probs=67.1

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCc---cccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNR---TELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +||..  +|+||||+||+++.++.+|++|||+++.........   ....++..|+|||......++.++||||||++++
T Consensus       110 ~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  189 (257)
T cd05060         110 YLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLW  189 (257)
T ss_pred             HHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHH
Confidence            44443  999999999999999999999999988665432211   1122345799999998888999999999999999


Q ss_pred             HHHc-CCCC
Q 039937          161 EVMK-GKHP  168 (208)
Q Consensus       161 ellt-g~~p  168 (208)
                      |+++ |+.|
T Consensus       190 ~~~~~g~~p  198 (257)
T cd05060         190 EAFSYGAKP  198 (257)
T ss_pred             HHHcCCCCC
Confidence            9998 8888

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.78  E-value=5.2e-19  Score=151.70  Aligned_cols=115  Identities=17%  Similarity=0.143  Sum_probs=81.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+|++|||+++.......  ......++..|+|||.+....++.++||||||++++|+++ |..
T Consensus       259 vH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~  338 (400)
T cd05105         259 VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGT  338 (400)
T ss_pred             eCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            8999999999999999999999999986543311  1122345678999999988888999999999999999997 888


Q ss_pred             Cccc--HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRHF--IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~~--l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |...  ............  ........+...+.++...|++
T Consensus       339 P~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~  378 (400)
T cd05105         339 PYPGMIVDSTFYNKIKSG--YRMAKPDHATQEVYDIMVKCWN  378 (400)
T ss_pred             CCcccchhHHHHHHHhcC--CCCCCCccCCHHHHHHHHHHCc
Confidence            8321  112222222222  1112234455577788888875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.78  E-value=4e-19  Score=144.77  Aligned_cols=85  Identities=21%  Similarity=0.199  Sum_probs=68.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      ++||..  +||||||+||+++.++.++++|||+++.......   ......++..|++||.+.....+.++||||||+++
T Consensus       121 ~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l  200 (283)
T cd05080         121 AYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTL  200 (283)
T ss_pred             HHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHH
Confidence            455544  9999999999999999999999999887654311   11122345679999998888889999999999999


Q ss_pred             HHHHcCCCCc
Q 039937          160 LEVMKGKHPR  169 (208)
Q Consensus       160 ~elltg~~p~  169 (208)
                      +|++||+.|.
T Consensus       201 ~el~tg~~p~  210 (283)
T cd05080         201 YELLTHCDSK  210 (283)
T ss_pred             HHHHhCCCCC
Confidence            9999999883

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.78  E-value=3.7e-19  Score=146.79  Aligned_cols=78  Identities=23%  Similarity=0.295  Sum_probs=65.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +|+||||+||+++.+..++++|||+++.......  ......++..|+|||.+.....+.++||||+|++++|+++ |+.
T Consensus       163 vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~  242 (302)
T cd05055         163 IHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSN  242 (302)
T ss_pred             ehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876543321  1112345678999999988888999999999999999998 888


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       243 p  243 (302)
T cd05055         243 P  243 (302)
T ss_pred             C
Confidence            8

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.78  E-value=3.2e-19  Score=143.64  Aligned_cols=120  Identities=20%  Similarity=0.177  Sum_probs=82.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC---ccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .++|..  +||||||+||+++.++.+|++|||++.........   .....++..|+|||.+....++.++||||||+++
T Consensus       109 ~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  188 (257)
T cd05115         109 KYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITM  188 (257)
T ss_pred             HHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHH
Confidence            344444  99999999999999999999999998765433111   1112234679999998888889999999999999


Q ss_pred             HHHHc-CCCCccc--HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMK-GKHPRHF--IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~ellt-g~~p~~~--l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+++ |+.|...  -.++.... ...  .....++....++..+...|++
T Consensus       189 ~el~~~g~~p~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~l~~li~~c~~  236 (257)
T cd05115         189 WEAFSYGQKPYKKMKGPEVMSFI-EQG--KRLDCPAECPPEMYALMKDCWI  236 (257)
T ss_pred             HHHhcCCCCCcCcCCHHHHHHHH-HCC--CCCCCCCCCCHHHHHHHHHHcC
Confidence            99996 9988322  22222211 121  1122344555667777777765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=3.9e-19  Score=142.63  Aligned_cols=83  Identities=23%  Similarity=0.333  Sum_probs=69.0

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC---CcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL---KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~S~Gvvl~  160 (208)
                      +||..  +|+||+|+||+++.++.+|++|||++..............++..|++||.+...   .++.++|+||||++++
T Consensus       116 ~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~  195 (262)
T cd06613         116 YLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAI  195 (262)
T ss_pred             HHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHH
Confidence            44443  999999999999999999999999987654432223345678889999998766   7889999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+||+.|
T Consensus       196 ~~~tg~~p  203 (262)
T cd06613         196 ELAELQPP  203 (262)
T ss_pred             HHHhCCCC
Confidence            99999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.78  E-value=8.8e-19  Score=140.46  Aligned_cols=116  Identities=17%  Similarity=0.187  Sum_probs=81.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      ++|..  +||||||+||+++.++.+|++|||++.......   .....+..|+|||.+....++.++|+||||++++|++
T Consensus       115 ~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~  191 (254)
T cd05083         115 YLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVF  191 (254)
T ss_pred             HHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC---CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence            44443  999999999999999999999999987644321   1223356799999988888899999999999999999


Q ss_pred             c-CCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          164 K-GKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       164 t-g~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      + |+.|  .....++..... ..  ............+..+..+|++
T Consensus       192 ~~g~~p~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~~~l~  235 (254)
T cd05083         192 SYGRAPYPKMSLKEVKECVE-KG--YRMEPPEGCPADVYVLMTSCWE  235 (254)
T ss_pred             hCCCCCCccCCHHHHHHHHh-CC--CCCCCCCcCCHHHHHHHHHHcC
Confidence            7 8888  223333322221 11  1111233445577778888875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.78  E-value=3e-19  Score=145.73  Aligned_cols=83  Identities=29%  Similarity=0.320  Sum_probs=68.1

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC---CcCcccchHHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL---KVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~S~Gvv  158 (208)
                      +|+|+.   +||||||+||+++.++.++++|||++....... ......++..|+|||.+...   .++.++||||+|++
T Consensus       121 ~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i  199 (288)
T cd06616         121 NYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGIT  199 (288)
T ss_pred             HHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHH
Confidence            456542   999999999999999999999999987544321 11233578899999998765   67899999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++|+++|+.|
T Consensus       200 l~el~~g~~p  209 (288)
T cd06616         200 LYEVATGKFP  209 (288)
T ss_pred             HHHHHhCCCC
Confidence            9999999999

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.78  E-value=8.7e-19  Score=142.46  Aligned_cols=78  Identities=23%  Similarity=0.334  Sum_probs=64.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCc--cccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||+++.........  ....++..|++||.+....++.++|+||||++++|+++ |+.
T Consensus       131 ~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~  210 (279)
T cd05057         131 VHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAK  210 (279)
T ss_pred             EecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCC
Confidence            899999999999999999999999998765432111  11223467999999888888999999999999999998 999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       211 p  211 (279)
T cd05057         211 P  211 (279)
T ss_pred             C
Confidence            8

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.78  E-value=1.9e-19  Score=151.51  Aligned_cols=76  Identities=22%  Similarity=0.230  Sum_probs=62.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccC-C-----cCcccchHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTL-K-----VAKKCGMHSSGLLALEV  162 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~-~-----~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||||+.|||+..++++-|+|||++..+...  ....-...||..|||||.+.+. .     .-.+.||||.|.|+||+
T Consensus       338 aHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi  417 (534)
T KOG3653|consen  338 AHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEI  417 (534)
T ss_pred             ccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999887755  2223346899999999987532 1     12568999999999999


Q ss_pred             HcCC
Q 039937          163 MKGK  166 (208)
Q Consensus       163 ltg~  166 (208)
                      +++-
T Consensus       418 ~SRC  421 (534)
T KOG3653|consen  418 ASRC  421 (534)
T ss_pred             Hhhc
Confidence            8643

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1e-18  Score=141.66  Aligned_cols=78  Identities=26%  Similarity=0.334  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|+|||.+..+ .++.++|+||||++++++++|+.|
T Consensus       123 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p  201 (277)
T cd06917         123 IHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPP  201 (277)
T ss_pred             ccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999988766543333344678899999987654 468899999999999999999999

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.78  E-value=4.6e-19  Score=145.57  Aligned_cols=83  Identities=24%  Similarity=0.367  Sum_probs=69.8

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||..  +||||||+||+++.++.++++|||++..............++..|+|||......++.++|+||||++++|++
T Consensus       133 ~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~  212 (292)
T cd06658         133 YLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI  212 (292)
T ss_pred             HHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence            44443  8999999999999999999999999876543322223456788999999988888899999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       213 ~g~~p  217 (292)
T cd06658         213 DGEPP  217 (292)
T ss_pred             hCCCC
Confidence            99999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.78  E-value=6.1e-19  Score=142.53  Aligned_cols=84  Identities=21%  Similarity=0.221  Sum_probs=64.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCcccccccccccccccccc-------CCcCcccchH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYT-------LKVAKKCGMH  153 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~  153 (208)
                      +|+|+.  +||||||+||+++.++.+|++|||++.......  .......++..|+|||....       ...+.++|||
T Consensus       114 ~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw  193 (269)
T cd05042         114 LWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIW  193 (269)
T ss_pred             HHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHH
Confidence            455554  999999999999999999999999986543221  11122345677999998642       3467899999


Q ss_pred             HHHHHHHHHHc-CCCC
Q 039937          154 SSGLLALEVMK-GKHP  168 (208)
Q Consensus       154 S~Gvvl~ellt-g~~p  168 (208)
                      |+|++++|+++ |+.|
T Consensus       194 slG~~l~el~~~~~~p  209 (269)
T cd05042         194 SLGVTMWELFTAADQP  209 (269)
T ss_pred             HHHHHHHHHHhCCCCC
Confidence            99999999998 6777

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.78  E-value=7.4e-19  Score=141.27  Aligned_cols=78  Identities=24%  Similarity=0.303  Sum_probs=66.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC----CccccccccccccccccccC-CcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS----NRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +|+||+|+||++++++.++++|||++........    ......++..|++||.+... ..+.++|+||||++++|+++|
T Consensus       124 ~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g  203 (267)
T cd06610         124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATG  203 (267)
T ss_pred             ecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhC
Confidence            9999999999999999999999999876654321    12334678899999998766 678999999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       204 ~~p  206 (267)
T cd06610         204 AAP  206 (267)
T ss_pred             CCC
Confidence            999

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=5.3e-19  Score=143.72  Aligned_cols=78  Identities=24%  Similarity=0.273  Sum_probs=64.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|++||.+.     ...++.++|+||||+++||+++|
T Consensus       125 ~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g  204 (280)
T cd06611         125 IHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQM  204 (280)
T ss_pred             ccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhC
Confidence            9999999999999999999999998766543322233456788999999874     34467899999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       205 ~~p  207 (280)
T cd06611         205 EPP  207 (280)
T ss_pred             CCC
Confidence            999

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.77  E-value=8.9e-19  Score=140.36  Aligned_cols=114  Identities=15%  Similarity=0.111  Sum_probs=83.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC--
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP--  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p--  168 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|+|||.......+.++|+||||++++++++|+.|  
T Consensus       123 ~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~  202 (256)
T cd08218         123 LHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE  202 (256)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCcc
Confidence            999999999999999999999999998765432222234578889999999888889999999999999999999998  


Q ss_pred             cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .....+.+.......  . ..+...+...+..+..+|++
T Consensus       203 ~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08218         203 AGNMKNLVLKIIRGS--Y-PPVSSHYSYDLRNLVSQLFK  238 (256)
T ss_pred             CCCHHHHHHHHhcCC--C-CCCcccCCHHHHHHHHHHhh
Confidence            333444444443322  1 11233444456666666654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.77  E-value=3.1e-19  Score=145.20  Aligned_cols=78  Identities=19%  Similarity=0.244  Sum_probs=65.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||+++.............++..|+|||.+... .++.++||||+|++++||+||..|
T Consensus       121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p  199 (284)
T cd07839         121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  199 (284)
T ss_pred             ecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCC
Confidence            899999999999999999999999987654332222334567899999987654 468899999999999999999888

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.77  E-value=1.1e-18  Score=143.34  Aligned_cols=117  Identities=10%  Similarity=0.075  Sum_probs=78.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc--CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK--GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~  166 (208)
                      +||||||+||+++.++.++++|||+++......  .......++..|++||....+.++.++|+||||+++||+++  |.
T Consensus       152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~  231 (296)
T cd05095         152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE  231 (296)
T ss_pred             ecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCC
Confidence            999999999999999999999999987654321  11112234567999998888889999999999999999998  55


Q ss_pred             CCc--ccHHHHHH---hhcCCCC-CCccccCCCCCchHHHHhccccC
Q 039937          167 HPR--HFIFSICS---SSSNFVI-APHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~--~~l~~~~~---~~~~~~~-~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|.  ....+++.   +...... .......+.....+.++..+|++
T Consensus       232 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  278 (296)
T cd05095         232 QPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWR  278 (296)
T ss_pred             CCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcC
Confidence            662  12222221   1111110 01111123344577788888876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.77  E-value=6.6e-19  Score=143.43  Aligned_cols=78  Identities=19%  Similarity=0.198  Sum_probs=64.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC---ccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.+|++|||++.........   .....++..|+|||......++.++|+||||++++|+++|..
T Consensus       130 ~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~  209 (284)
T cd05081         130 VHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD  209 (284)
T ss_pred             eeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCC
Confidence            99999999999999999999999999876543211   111123446999999988888999999999999999999876


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       210 ~  210 (284)
T cd05081         210 K  210 (284)
T ss_pred             c
Confidence            6

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.77  E-value=9.3e-19  Score=141.09  Aligned_cols=120  Identities=22%  Similarity=0.248  Sum_probs=83.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC------CCccccccccccccccccccCCcCcccchHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSG  156 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~G  156 (208)
                      +++|..  +||||+|+||++++++.++++|||.++......      .......++..|+|||.+....++.++|+||+|
T Consensus       120 ~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG  199 (267)
T cd06628         120 NYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLG  199 (267)
T ss_pred             HHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHH
Confidence            344444  999999999999999999999999988765321      111234578899999999888888999999999


Q ss_pred             HHHHHHHcCCCCcccHHH--HHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          157 LLALEVMKGKHPRHFIFS--ICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       157 vvl~elltg~~p~~~l~~--~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++++++++|+.|......  -+.... ..  ....++..+...+..+...|++
T Consensus       200 ~il~~l~~g~~p~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~~~l~  249 (267)
T cd06628         200 CLVVEMLTGKHPFPDCTQLQAIFKIG-EN--ASPEIPSNISSEAIDFLEKTFE  249 (267)
T ss_pred             HHHHHHhhCCCCCCCccHHHHHHHHh-cc--CCCcCCcccCHHHHHHHHHHcc
Confidence            999999999999322211  111111 11  2223344455566666666664

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.77  E-value=7.2e-19  Score=144.37  Aligned_cols=78  Identities=27%  Similarity=0.407  Sum_probs=67.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||+|+||+++.++.++++|||++..............++..|++||.+....++.++|+||||++++|+++|+.|
T Consensus       137 ~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~p  214 (293)
T cd06647         137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP  214 (293)
T ss_pred             eeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999887655443333344678889999998888889999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.77  E-value=6.2e-19  Score=141.50  Aligned_cols=86  Identities=26%  Similarity=0.286  Sum_probs=73.3

Q ss_pred             hHHHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           83 LEKLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        83 L~~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      ...++|+ .  +|+||+|+||+++.++.++++|||.+..............++..|+|||.......+.++|+||||+++
T Consensus       111 ~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il  190 (264)
T cd06623         111 GLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTL  190 (264)
T ss_pred             HHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHH
Confidence            3456676 4  999999999999999999999999988776543333345678899999999888889999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +++++|+.|
T Consensus       191 ~~l~tg~~p  199 (264)
T cd06623         191 LECALGKFP  199 (264)
T ss_pred             HHHHhCCCC
Confidence            999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.77  E-value=5.8e-19  Score=145.70  Aligned_cols=114  Identities=16%  Similarity=0.132  Sum_probs=78.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+|++|||.+........  ......++..|+|||.+....++.++||||||++++|+++ |+.
T Consensus       162 ~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~  241 (307)
T cd05098         162 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS  241 (307)
T ss_pred             ccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999876543211  1111223467999999888888999999999999999998 777


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  .....+..... .... . ..........+.++...|++
T Consensus       242 p~~~~~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~li~~~l~  280 (307)
T cd05098         242 PYPGVPVEELFKLL-KEGH-R-MDKPSNCTNELYMMMRDCWH  280 (307)
T ss_pred             CCCcCCHHHHHHHH-HcCC-C-CCCCCcCCHHHHHHHHHHcc
Confidence            7  22333333222 2221 1 11233445567777777764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.77  E-value=1.1e-18  Score=139.75  Aligned_cols=114  Identities=19%  Similarity=0.176  Sum_probs=84.9

Q ss_pred             hhcCcCCCceeeCCCC-cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC-
Q 039937           91 ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP-  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p-  168 (208)
                      +|+||||+||++++++ .+|++|||.+..............++..|+|||......++.++|+||||++++|+++|+.| 
T Consensus       123 ~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  202 (257)
T cd08225         123 LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPF  202 (257)
T ss_pred             ccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            9999999999999875 56999999887665443333334678899999998888889999999999999999999999 


Q ss_pred             -cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 -RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 -~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                       .....+++.......  . .-+.+.....+.++..+|++
T Consensus       203 ~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~i~~~l~  239 (257)
T cd08225         203 EGNNLHQLVLKICQGY--F-APISPNFSRDLRSLISQLFK  239 (257)
T ss_pred             CCccHHHHHHHHhccc--C-CCCCCCCCHHHHHHHHHHhc
Confidence             234555555544332  2 22344555667777777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.77  E-value=3.8e-19  Score=158.37  Aligned_cols=78  Identities=15%  Similarity=0.139  Sum_probs=60.9

Q ss_pred             hhcCcCCCceeeCC-CCcEEEcccceeeeecCC-CCCccccccccccccccccccC----------------------Cc
Q 039937           91 ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTL----------------------KV  146 (208)
Q Consensus        91 iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~----------------------~~  146 (208)
                      +||||||+|||++. ++.+||+|||+++..... ........+++.|+|||.+...                      .+
T Consensus       277 iHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~  356 (566)
T PLN03225        277 VHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL  356 (566)
T ss_pred             EeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence            99999999999985 689999999999865433 2222345678999999965321                      23


Q ss_pred             CcccchHHHHHHHHHHHcCCCC
Q 039937          147 AKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       147 ~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +.++||||+||++|||+++..|
T Consensus       357 ~~k~DVwSlGviL~el~~~~~~  378 (566)
T PLN03225        357 PDRFDIYSAGLIFLQMAFPNLR  378 (566)
T ss_pred             CCCcccHHHHHHHHHHHhCcCC
Confidence            4567999999999999998766

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=4.3e-19  Score=148.46  Aligned_cols=75  Identities=23%  Similarity=0.202  Sum_probs=61.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CCCccccccccccccccccccC----Cc--CcccchHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SSNRTELAGTYGYIALELTYTL----KV--AKKCGMHSSGLLAL  160 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~----~~--~~~~Dv~S~Gvvl~  160 (208)
                      .|||||+.|||+..++.+-|+|+|++......    ........||..|||||.+...    .+  -..+||||||.|+|
T Consensus       338 AHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlW  417 (513)
T KOG2052|consen  338 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLW  417 (513)
T ss_pred             hccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHH
Confidence            99999999999999999999999999876554    2234567899999999988532    11  15689999999999


Q ss_pred             HHHcC
Q 039937          161 EVMKG  165 (208)
Q Consensus       161 elltg  165 (208)
                      |+..+
T Consensus       418 EiarR  422 (513)
T KOG2052|consen  418 EIARR  422 (513)
T ss_pred             HHHHH
Confidence            98743

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.77  E-value=1.2e-18  Score=139.70  Aligned_cols=111  Identities=18%  Similarity=0.168  Sum_probs=77.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCCc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~  169 (208)
                      +|+||||+||+++.++.++++|||.++.......   ....+..|+|||.+....++.++|+||||++++|+++ |+.|.
T Consensus       124 ~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  200 (256)
T cd05039         124 VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  200 (256)
T ss_pred             cchhcccceEEEeCCCCEEEcccccccccccccc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence            9999999999999999999999999887643221   2234567999999988888999999999999999997 88882


Q ss_pred             --ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 --HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 --~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        ....+.. ......  ............+..+..+|++
T Consensus       201 ~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~li~~~l~  237 (256)
T cd05039         201 PRIPLKDVV-PHVEKG--YRMEAPEGCPPEVYKVMKDCWE  237 (256)
T ss_pred             CCCCHHHHH-HHHhcC--CCCCCccCCCHHHHHHHHHHhc
Confidence              2222211 111111  1111223344566677777764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.77  E-value=7.5e-19  Score=143.24  Aligned_cols=82  Identities=24%  Similarity=0.296  Sum_probs=66.1

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCC------cCcccchHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK------VAKKCGMHSS  155 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~------~~~~~Dv~S~  155 (208)
                      ++||..   +||||||+||+++.++.++++|||++.......  .....++..|+|||.+....      ++.++|+||+
T Consensus       116 ~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diwsl  193 (286)
T cd06622         116 KFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL--AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSL  193 (286)
T ss_pred             HHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--cccCCCccCccCcchhcCCCCCccCCCCcccchHhH
Confidence            455532   899999999999999999999999987654321  12335678899999875443      4789999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      |++++|+++|+.|
T Consensus       194 G~il~~l~~g~~p  206 (286)
T cd06622         194 GLSILEMALGRYP  206 (286)
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.77  E-value=9.4e-19  Score=141.50  Aligned_cols=120  Identities=16%  Similarity=0.126  Sum_probs=82.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .|+|+.  +||||||+||+++.++.+|++|||+++.......  ......++..|++||.+.....+.++||||||++++
T Consensus       127 ~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~  206 (273)
T cd05074         127 EYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMW  206 (273)
T ss_pred             HHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHH
Confidence            455655  9999999999999999999999999886543211  112233456799999988888889999999999999


Q ss_pred             HHHc-CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+++ |+.|.  ....+.......... .  ..++.....+.++...|++
T Consensus       207 el~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~~l~  253 (273)
T cd05074         207 EIMTRGQTPYAGVENSEIYNYLIKGNR-L--KQPPDCLEDVYELMCQCWS  253 (273)
T ss_pred             HHhhCCCCCCCCCCHHHHHHHHHcCCc-C--CCCCCCCHHHHHHHHHHcC
Confidence            9999 77772  222222111111111 1  1223444577788888875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.77  E-value=4.2e-19  Score=144.38  Aligned_cols=84  Identities=20%  Similarity=0.168  Sum_probs=67.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||||+||+++.++.++|+|||++..............++..|+|||.+.. ..++.++||||+|++++|
T Consensus       115 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~  194 (285)
T cd07861         115 LFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAE  194 (285)
T ss_pred             HHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHH
Confidence            344444  99999999999999999999999998765433222233356788999998764 346889999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      ++||+.|
T Consensus       195 l~tg~~~  201 (285)
T cd07861         195 MATKKPL  201 (285)
T ss_pred             HHHCCCC
Confidence            9999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.77  E-value=1.1e-18  Score=142.34  Aligned_cols=82  Identities=23%  Similarity=0.312  Sum_probs=67.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      ++||..  +||||||+||+++.++.++++|||++.......  .....++..|+|||.... ..++.++|+||+|++++|
T Consensus       111 ~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~  188 (279)
T cd05633         111 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFK  188 (279)
T ss_pred             HHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHH
Confidence            455554  999999999999999999999999987554322  123468899999998764 457899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       189 l~~g~~p  195 (279)
T cd05633         189 LLRGHSP  195 (279)
T ss_pred             HHhCCCC
Confidence            9999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.77  E-value=7.6e-19  Score=141.96  Aligned_cols=78  Identities=21%  Similarity=0.278  Sum_probs=64.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC-c--cccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN-R--TELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~-~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||||+||+++.++.++++|||++......... .  ....++..|++||.+....++.++|+||||++++|+++ |+
T Consensus       128 ~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~  207 (267)
T cd05066         128 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE  207 (267)
T ss_pred             eehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999876543211 1  11223457999999988888999999999999999886 99


Q ss_pred             CC
Q 039937          167 HP  168 (208)
Q Consensus       167 ~p  168 (208)
                      .|
T Consensus       208 ~p  209 (267)
T cd05066         208 RP  209 (267)
T ss_pred             CC
Confidence            98

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.77  E-value=1.2e-18  Score=142.25  Aligned_cols=114  Identities=11%  Similarity=0.084  Sum_probs=81.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.++++|||++.......  ........+..|+|||.+....++.++||||||++++||++ |..
T Consensus       152 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~  231 (288)
T cd05050         152 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQ  231 (288)
T ss_pred             ecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987654321  11112234567999999888889999999999999999997 877


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....++..... ... ... .......++.++..+|++
T Consensus       232 p~~~~~~~~~~~~~~-~~~-~~~-~~~~~~~~l~~li~~~l~  270 (288)
T cd05050         232 PYYGMAHEEVIYYVR-DGN-VLS-CPDNCPLELYNLMRLCWS  270 (288)
T ss_pred             CCCCCCHHHHHHHHh-cCC-CCC-CCCCCCHHHHHHHHHHcc
Confidence            72  23334333322 221 211 233445678888888876

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=1.2e-18  Score=144.21  Aligned_cols=78  Identities=22%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-----------------------------Ccccccccccccccccc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-----------------------------NRTELAGTYGYIALELT  141 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-----------------------------~~~~~~g~~~y~aPE~~  141 (208)
                      +|+||||+||+++.++.++++|||++........                             ......|+..|+|||.+
T Consensus       125 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~  204 (316)
T cd05574         125 VYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVI  204 (316)
T ss_pred             eccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHH
Confidence            9999999999999999999999998875432210                             11123578889999999


Q ss_pred             ccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          142 YTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       142 ~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ....++.++||||||+++|++++|+.|
T Consensus       205 ~~~~~~~~~Di~slG~ll~~l~~g~~p  231 (316)
T cd05574         205 SGDGHGSAVDWWTLGILLYEMLYGTTP  231 (316)
T ss_pred             cCCCCCchHHHHHHHHHHHHHhhCCCC
Confidence            888889999999999999999999999

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.77  E-value=1.4e-18  Score=142.30  Aligned_cols=80  Identities=29%  Similarity=0.329  Sum_probs=68.9

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||..  +|+||+|+||+++.++.+|++|||+++.....   .....+++.|++||.+.....+.++|+||+|+++++++
T Consensus       116 ~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  192 (290)
T cd05580         116 YLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEML  192 (290)
T ss_pred             HHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHH
Confidence            44443  99999999999999999999999998876543   23446788999999988778889999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       193 ~g~~p  197 (290)
T cd05580         193 AGYPP  197 (290)
T ss_pred             hCCCC
Confidence            99999

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.77  E-value=2.1e-18  Score=138.00  Aligned_cols=114  Identities=19%  Similarity=0.149  Sum_probs=79.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCC-cCcccchHHHHHHHHHHHcCCCCc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK-VAKKCGMHSSGLLALEVMKGKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~elltg~~p~  169 (208)
                      +|+||+|+||+++.++.+|++|||++....... ......++..|++||.+.... .+.++|+||||++++++++|+.|.
T Consensus       124 ~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf  202 (258)
T cd06632         124 VHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPW  202 (258)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCccceeccccc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence            899999999999999999999999987654332 223456788899999887665 889999999999999999999992


Q ss_pred             cc--HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 HF--IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 ~~--l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..  -.+.........  ....+.+.+.....++..+|++
T Consensus       203 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~  240 (258)
T cd06632         203 SQLEGVAAVFKIGRSK--ELPPIPDHLSDEAKDFILKCLQ  240 (258)
T ss_pred             ccCcHHHHHHHHHhcc--cCCCcCCCcCHHHHHHHHHHhh
Confidence            21  112222211111  1122334445556666666654

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.77  E-value=2.5e-18  Score=137.77  Aligned_cols=119  Identities=16%  Similarity=0.114  Sum_probs=85.8

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||+.  +|+||+|+||+++.++.+|++|||++..............++..|+|||...+...+.++|+||||++++|++
T Consensus       116 ~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~  195 (256)
T cd08221         116 YIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL  195 (256)
T ss_pred             HHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHH
Confidence            44443  8999999999999999999999999987655432334456789999999988777889999999999999999


Q ss_pred             cCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          164 KGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       164 tg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+.|  .....+.........  ... ..+.....+.++...|++
T Consensus       196 ~g~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~i~~~l~  238 (256)
T cd08221         196 TLKRTFDATNPLNLVVKIVQGN--YTP-VVSVYSSELISLVHSLLQ  238 (256)
T ss_pred             HCCCCCCCCCHHHHHHHHHcCC--CCC-CccccCHHHHHHHHHHcc
Confidence            99988  223333333333221  221 224444566666666654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.77  E-value=7.7e-19  Score=142.79  Aligned_cols=84  Identities=19%  Similarity=0.241  Sum_probs=68.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +|+||||+||+++.++.++++|||++..............++..|++||.+.. ..++.++|+||||++++|
T Consensus       114 ~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~  193 (286)
T cd07847         114 NFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAE  193 (286)
T ss_pred             HHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHH
Confidence            345544  99999999999999999999999999876544322233456788999998765 457889999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       194 l~~g~~p  200 (286)
T cd07847         194 LLTGQPL  200 (286)
T ss_pred             HHhCCCC
Confidence            9999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.77  E-value=1.7e-18  Score=138.84  Aligned_cols=121  Identities=15%  Similarity=0.137  Sum_probs=84.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .++|..  +|+||+|+||+++.++.+|++|||+++.......   ......++..|++||++....++.++||||||+++
T Consensus       111 ~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l  190 (257)
T cd05040         111 RYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTL  190 (257)
T ss_pred             HHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHH
Confidence            455555  9999999999999999999999999987654311   11123467789999999888889999999999999


Q ss_pred             HHHHc-CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMK-GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~ellt-g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +||++ |+.|.  ..-.+..........  ...........+..+...|++
T Consensus       191 ~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~  239 (257)
T cd05040         191 WEMFTYGEEPWAGLSGSQILKKIDKEGE--RLERPEACPQDIYNVMLQCWA  239 (257)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCC--cCCCCccCCHHHHHHHHHHCC
Confidence            99998 99983  222233332222221  111222344566677777765

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.77  E-value=1.9e-18  Score=139.26  Aligned_cols=115  Identities=19%  Similarity=0.180  Sum_probs=80.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC------CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD------SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~------~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +|+||+|+||+++.++.++++|||++......      ........++..|+|||.+....++.++||||+|++++|+++
T Consensus       124 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~  203 (265)
T cd06631         124 VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMAT  203 (265)
T ss_pred             ccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHh
Confidence            99999999999999999999999988754321      111223457889999999988888999999999999999999


Q ss_pred             CCCCcccHH---HHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          165 GKHPRHFIF---SICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       165 g~~p~~~l~---~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+.|.....   ..........  ....++......+..+..+|++
T Consensus       204 g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~  247 (265)
T cd06631         204 GKPPLASMDRLAAMFYIGAHRG--LMPRLPDSFSAAAIDFVTSCLT  247 (265)
T ss_pred             CCCccccCChHHHHHHhhhccC--CCCCCCCCCCHHHHHHHHHHhc
Confidence            999932211   1111111111  2223344455566677777764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.77  E-value=4.7e-19  Score=148.16  Aligned_cols=83  Identities=20%  Similarity=0.258  Sum_probs=67.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC---CCcccccccccccccccccc-CCcCcccchHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLA  159 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl  159 (208)
                      +||..  +||||||+||+++.++.+|++|||++.......   .......++..|+|||.+.. ..++.++||||+|+++
T Consensus       121 ~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil  200 (336)
T cd07849         121 YIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCIL  200 (336)
T ss_pred             HHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHH
Confidence            44444  999999999999999999999999988754331   11223467889999998654 4578999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +|+++|+.|
T Consensus       201 ~el~~G~~~  209 (336)
T cd07849         201 AEMLSNRPL  209 (336)
T ss_pred             HHHHhCCCC
Confidence            999999988

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.77  E-value=3.3e-19  Score=156.11  Aligned_cols=83  Identities=27%  Similarity=0.282  Sum_probs=70.1

Q ss_pred             HHhhhh--hhcCcCCCceeeC--C--CCcEEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLD--L--EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld--~--~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gv  157 (208)
                      .|||++  +||||||.||++-  .  .-.-||+|||.++...+++ ....+.||..|.+||.+. ...++...|.|||||
T Consensus       134 ~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gv  212 (732)
T KOG4250|consen  134 RHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGV  212 (732)
T ss_pred             HHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhh
Confidence            455554  9999999999983  2  2345999999999887665 445678999999999988 488899999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      ++|+.+||..|
T Consensus       213 tlY~caTG~lP  223 (732)
T KOG4250|consen  213 TLYECATGELP  223 (732)
T ss_pred             HHHHHhccCCC
Confidence            99999999999

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.77  E-value=8.7e-19  Score=141.63  Aligned_cols=78  Identities=26%  Similarity=0.379  Sum_probs=63.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--Ccc-ccc--cccccccccccccCCcCcccchHHHHHHHHHHHc-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRT-ELA--GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~-~~~--g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-  164 (208)
                      +|+||||+||+++.++.+|++|||++........  ... ...  .+..|++||.+....++.++||||||++++|+++ 
T Consensus       128 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~  207 (269)
T cd05065         128 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY  207 (269)
T ss_pred             eecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcC
Confidence            9999999999999999999999999876543311  111 111  1347999999988888999999999999999886 


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       208 g~~p  211 (269)
T cd05065         208 GERP  211 (269)
T ss_pred             CCCC
Confidence            9988

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.77  E-value=1.2e-19  Score=157.08  Aligned_cols=108  Identities=18%  Similarity=0.228  Sum_probs=82.2

Q ss_pred             HHhhhh----hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE----ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~----iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||++    ||||||=.||+++. .|.+||.|+|+|........  ..+.||+.|||||.+- -.|+...||||||+.+
T Consensus       157 ~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a--ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCm  233 (632)
T KOG0584|consen  157 VYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA--KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCM  233 (632)
T ss_pred             hhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc--ceeccCccccChHHHh-hhcchhhhhhhhhHHH
Confidence            455554    99999999999986 59999999999998765432  3378999999999776 7789999999999999


Q ss_pred             HHHHcCCCC------cccHHHHHHhhcCCCCCCccccCCCCCc
Q 039937          160 LEVMKGKHP------RHFIFSICSSSSNFVIAPHEILDPRFQP  196 (208)
Q Consensus       160 ~elltg~~p------~~~l~~~~~~~~~~~~~~~~~~D~~l~~  196 (208)
                      +||+|+..|      ...+...|....+... +..+-||.+++
T Consensus       234 LEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s-l~kV~dPevr~  275 (632)
T KOG0584|consen  234 LEMVTSEYPYSECTNPAQIYKKVTSGIKPAA-LSKVKDPEVRE  275 (632)
T ss_pred             HHHHhccCChhhhCCHHHHHHHHHcCCCHHH-hhccCCHHHHH
Confidence            999999999      2233333444333332 66666666543

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.76  E-value=1.1e-18  Score=142.37  Aligned_cols=84  Identities=19%  Similarity=0.210  Sum_probs=67.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .++|+.  +||||||+||+++.++.++++|||++........   ......++..|+|||.+....++.++||||||+++
T Consensus       123 ~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il  202 (284)
T cd05079         123 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL  202 (284)
T ss_pred             HHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhh
Confidence            344444  9999999999999999999999999886543321   11234456679999998888889999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +|++|++.|
T Consensus       203 ~ellt~~~~  211 (284)
T cd05079         203 YELLTYCDS  211 (284)
T ss_pred             hhhhcCCCC
Confidence            999998766

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.76  E-value=1.6e-18  Score=145.50  Aligned_cols=78  Identities=22%  Similarity=0.304  Sum_probs=64.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||.||+++.++.+|++|||++........  ......++..|+|||.+....++.++|+||||++++|+++ |..
T Consensus       201 ~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~  280 (343)
T cd05103         201 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  280 (343)
T ss_pred             ecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            8999999999999999999999999876543211  1112334567999999888888999999999999999996 888


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       281 p  281 (343)
T cd05103         281 P  281 (343)
T ss_pred             C
Confidence            8

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.76  E-value=1.9e-18  Score=144.39  Aligned_cols=114  Identities=16%  Similarity=0.128  Sum_probs=80.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......++..|+|||.+....++.++||||||++++||++ |+.
T Consensus       156 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  235 (334)
T cd05100         156 IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS  235 (334)
T ss_pred             eccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999876543211  1112233467999999988888999999999999999998 777


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  .....++........  . .........++.++...|++
T Consensus       236 p~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~l~~li~~cl~  274 (334)
T cd05100         236 PYPGIPVEELFKLLKEGH--R-MDKPANCTHELYMIMRECWH  274 (334)
T ss_pred             CCCCCCHHHHHHHHHcCC--C-CCCCCCCCHHHHHHHHHHcc
Confidence            7  233344433332221  1 11223444567777777765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.76  E-value=1.3e-18  Score=144.14  Aligned_cols=78  Identities=19%  Similarity=0.224  Sum_probs=64.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC--ccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN--RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+|++|||+++........  .....++..|+|||.+....++.++||||||++++|+++ |..
T Consensus       156 ~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~  235 (314)
T cd05099         156 IHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGS  235 (314)
T ss_pred             eeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999865432111  111223457999999888888999999999999999998 777


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       236 p  236 (314)
T cd05099         236 P  236 (314)
T ss_pred             C
Confidence            7

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.76  E-value=7.1e-19  Score=162.47  Aligned_cols=77  Identities=26%  Similarity=0.298  Sum_probs=63.1

Q ss_pred             hhcCcCCCceeeCC-----------------CCcEEEcccceeeeecCCCCCcccccccccccccccccc--CCcCcccc
Q 039937           91 ISFTTSSKNGLLDL-----------------EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT--LKVAKKCG  151 (208)
Q Consensus        91 iH~dlk~~nilld~-----------------~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~D  151 (208)
                      +||||||+|||++.                 ...+||+|||++....... ......|++.|+|||.+..  ..++.++|
T Consensus       147 VHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSD  225 (1021)
T PTZ00266        147 LHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSD  225 (1021)
T ss_pred             eeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhH
Confidence            99999999999964                 3458999999998764332 1234568999999998853  45789999


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      ||||||++|||+||+.|
T Consensus       226 VWSLG~ILYELLTGk~P  242 (1021)
T PTZ00266        226 MWALGCIIYELCSGKTP  242 (1021)
T ss_pred             HHHHHHHHHHHHHCCCC
Confidence            99999999999999999

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.76  E-value=7.2e-19  Score=143.40  Aligned_cols=82  Identities=22%  Similarity=0.250  Sum_probs=69.1

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .|||+.   +||||+|+||+++.++.++++|||++.......  .....++..|++||.+.....+.++|+||||++++|
T Consensus       117 ~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~  194 (284)
T cd06620         117 TYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIE  194 (284)
T ss_pred             HHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHH
Confidence            456642   999999999999999999999999886543221  123467899999999888888999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       195 l~tg~~p  201 (284)
T cd06620         195 LALGKFP  201 (284)
T ss_pred             HHhCCCC
Confidence            9999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.76  E-value=2.4e-18  Score=139.26  Aligned_cols=84  Identities=14%  Similarity=0.214  Sum_probs=63.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCcccccccccccccccccc-------CCcCcccchH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYT-------LKVAKKCGMH  153 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~  153 (208)
                      +|+|+.  +||||||+||+++.++.+|++|||++......  ........++..|+|||++..       ...+.++|||
T Consensus       113 ~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw  192 (268)
T cd05086         113 THMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVW  192 (268)
T ss_pred             HHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhH
Confidence            344444  99999999999999999999999987643221  111223456788999998742       2356889999


Q ss_pred             HHHHHHHHHHcC-CCC
Q 039937          154 SSGLLALEVMKG-KHP  168 (208)
Q Consensus       154 S~Gvvl~elltg-~~p  168 (208)
                      |||++++|++++ ..|
T Consensus       193 slG~~l~el~~~~~~p  208 (268)
T cd05086         193 ALGVTLWELFENAAQP  208 (268)
T ss_pred             HHHHHHHHHHhCCCCC
Confidence            999999999974 556

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=8.4e-19  Score=142.92  Aligned_cols=85  Identities=26%  Similarity=0.302  Sum_probs=77.0

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      ..|||+.  |.||+|..|+|+|..++.|+.|||+++.--.+.....+.+||+.|+|||.+.+..+....|.|++||+++|
T Consensus       364 l~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfe  443 (593)
T KOG0695|consen  364 LNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE  443 (593)
T ss_pred             HHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHH
Confidence            4566666  99999999999999999999999999876555555677899999999999999999999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |+.|+.|
T Consensus       444 mmagrsp  450 (593)
T KOG0695|consen  444 MMAGRSP  450 (593)
T ss_pred             HHcCCCC
Confidence            9999999

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.76  E-value=8.6e-19  Score=142.66  Aligned_cols=84  Identities=21%  Similarity=0.241  Sum_probs=68.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +|+|++|+||++++++.++++|||++..............++..|+|||+... ...+.++||||||++++|
T Consensus       114 ~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e  193 (286)
T cd07846         114 EFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTE  193 (286)
T ss_pred             HHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHH
Confidence            344444  99999999999999999999999998876544333334457889999998764 446789999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       194 l~~g~~~  200 (286)
T cd07846         194 MLTGEPL  200 (286)
T ss_pred             HHcCCCC
Confidence            9999877

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=4.6e-20  Score=154.71  Aligned_cols=117  Identities=24%  Similarity=0.274  Sum_probs=82.8

Q ss_pred             hhcCcCCCceeeC---CCCcEEEcccceeeeecCCCC-------CccccccccccccccccccC----CcCcccchHHHH
Q 039937           91 ISFTTSSKNGLLD---LEYEARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYTL----KVAKKCGMHSSG  156 (208)
Q Consensus        91 iH~dlk~~nilld---~~~~~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~S~G  156 (208)
                      ||-||||.||||-   ..|..||.|||+++.+..+..       ......||.+|++||.+.-+    +++.|.||||.|
T Consensus       592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvG  671 (775)
T KOG1151|consen  592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVG  671 (775)
T ss_pred             eeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeee
Confidence            9999999999994   458899999999999876521       23456799999999988744    578999999999


Q ss_pred             HHHHHHHcCCCC-cccHHH--HHHhhc-CCCCCCccccCCCCCchHHHHhccccC
Q 039937          157 LLALEVMKGKHP-RHFIFS--ICSSSS-NFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       157 vvl~elltg~~p-~~~l~~--~~~~~~-~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |++|.-+.|++| +.+..+  .++... -...++.=-..|.+..++..+..+|++
T Consensus       672 VIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLa  726 (775)
T KOG1151|consen  672 VIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLA  726 (775)
T ss_pred             hhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHH
Confidence            999999999999 222222  222111 111112222344555577777788875

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.76  E-value=3e-18  Score=140.68  Aligned_cols=84  Identities=25%  Similarity=0.324  Sum_probs=67.5

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCC----cCcccchHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK----VAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~S~Gv  157 (208)
                      .|+|..   +||||+|+||++++++.+||+|||++........ .....++..|+|||.+....    ++.++|+||||+
T Consensus       128 ~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~  206 (296)
T cd06618         128 HYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGI  206 (296)
T ss_pred             HHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHH
Confidence            455542   9999999999999999999999999876543221 12335678899999886443    788999999999


Q ss_pred             HHHHHHcCCCCc
Q 039937          158 LALEVMKGKHPR  169 (208)
Q Consensus       158 vl~elltg~~p~  169 (208)
                      +++|+++|+.|.
T Consensus       207 il~el~~g~~p~  218 (296)
T cd06618         207 SLVELATGQFPY  218 (296)
T ss_pred             HHHHHHhCCCCC
Confidence            999999999993

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.76  E-value=1.8e-18  Score=139.93  Aligned_cols=78  Identities=15%  Similarity=0.221  Sum_probs=64.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +|+||||+||+++.++.+|++|||+++....... ......++..|+|||.+....++.++||||||++++|+++ |+.|
T Consensus       129 ~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  208 (270)
T cd05056         129 VHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKP  208 (270)
T ss_pred             eccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999887654311 1112233467999999887888999999999999999986 9988

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.76  E-value=3e-18  Score=138.59  Aligned_cols=78  Identities=22%  Similarity=0.292  Sum_probs=62.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccC-------CcCcccchHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTL-------KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~-------~~~~~~Dv~S~Gvvl~e  161 (208)
                      +||||||+||+++.++.+|++|||+++.......  ......++..|+|||.+...       .++.++|+||||++++|
T Consensus       122 ~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~e  201 (269)
T cd05087         122 IHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWE  201 (269)
T ss_pred             eccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHH
Confidence            9999999999999999999999999875433211  11234567789999987532       35789999999999999


Q ss_pred             HHc-CCCC
Q 039937          162 VMK-GKHP  168 (208)
Q Consensus       162 llt-g~~p  168 (208)
                      +++ |+.|
T Consensus       202 l~~~g~~p  209 (269)
T cd05087         202 LFELGSQP  209 (269)
T ss_pred             HHhCCCCC
Confidence            996 9988

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=1.6e-18  Score=139.80  Aligned_cols=78  Identities=26%  Similarity=0.354  Sum_probs=65.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-----CCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-----LKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +|+||+|+||+++.++.+|++|||++..............++..|+|||.+..     ..++.++||||+|++++|+++|
T Consensus       135 ~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g  214 (275)
T cd06608         135 IHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADG  214 (275)
T ss_pred             ccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhC
Confidence            99999999999999999999999998766543322334567889999998753     3467889999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       215 ~~p  217 (275)
T cd06608         215 KPP  217 (275)
T ss_pred             CCC
Confidence            999

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.76  E-value=9.3e-19  Score=144.69  Aligned_cols=82  Identities=22%  Similarity=0.297  Sum_probs=69.0

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .|||+.   +||||||.||+++.++.+|++|||++......  ......++..|+|||.+.+..++.++|+||||++++|
T Consensus       113 ~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~  190 (308)
T cd06615         113 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVE  190 (308)
T ss_pred             HHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc--ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHH
Confidence            455642   89999999999999999999999988765432  1233467889999999887788899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       191 l~~g~~p  197 (308)
T cd06615         191 MAIGRYP  197 (308)
T ss_pred             HHhCCCC
Confidence            9999988

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.76  E-value=6.5e-19  Score=154.31  Aligned_cols=79  Identities=16%  Similarity=0.232  Sum_probs=68.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCc---cccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNR---TELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      |||||...|+||-..-.+||+|||+.+.+......+   ......+.|.|||.+...+++.++|||+|||++|||+| |+
T Consensus       234 vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGE  313 (1039)
T KOG0199|consen  234 VHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGE  313 (1039)
T ss_pred             hhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCC
Confidence            999999999999999999999999999877653222   12234567999999999999999999999999999998 88


Q ss_pred             CCc
Q 039937          167 HPR  169 (208)
Q Consensus       167 ~p~  169 (208)
                      .||
T Consensus       314 ePW  316 (1039)
T KOG0199|consen  314 EPW  316 (1039)
T ss_pred             CCC
Confidence            883

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.76  E-value=5e-19  Score=142.85  Aligned_cols=114  Identities=22%  Similarity=0.187  Sum_probs=81.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +|++|+++||+++.++.+||+|||+.........  ..........|+|||.+.....+.++||||||+++||+++ |+.
T Consensus       125 iH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~  204 (259)
T PF07714_consen  125 IHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKF  204 (259)
T ss_dssp             EEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999987632211  1122345678999999988889999999999999999999 677


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  .....++.... .+.. . ...+......+..+...|++
T Consensus       205 p~~~~~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~li~~C~~  243 (259)
T PF07714_consen  205 PFSDYDNEEIIEKL-KQGQ-R-LPIPDNCPKDIYSLIQQCWS  243 (259)
T ss_dssp             TTTTSCHHHHHHHH-HTTE-E-TTSBTTSBHHHHHHHHHHT-
T ss_pred             cccccccccccccc-cccc-c-ceeccchhHHHHHHHHHHcC
Confidence            7  22344444443 2221 1 22344566678888888875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.76  E-value=8.5e-19  Score=143.26  Aligned_cols=78  Identities=18%  Similarity=0.185  Sum_probs=63.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||+++.............++..|+|||.+.. ..++.++||||+|++++|+++|+.|
T Consensus       125 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~  203 (291)
T cd07844         125 LHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPL  203 (291)
T ss_pred             ecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998754322222222345788999998764 4578899999999999999999988

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.76  E-value=3.5e-18  Score=138.39  Aligned_cols=115  Identities=13%  Similarity=0.048  Sum_probs=79.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.++++|||+++..... ........++..|++||.+.....+.++||||||++++++++ |..|
T Consensus       139 ~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p  218 (275)
T cd05046         139 VHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELP  218 (275)
T ss_pred             ccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999988654322 111223345677999999887778899999999999999998 6666


Q ss_pred             ccc--HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHF--IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~--l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ...  -.+.+.. ..... ............+.++...|++
T Consensus       219 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~l~~~i~~~l~  257 (275)
T cd05046         219 FYGLSDEEVLNR-LQAGK-LELPVPEGCPSRLYKLMTRCWA  257 (275)
T ss_pred             ccccchHHHHHH-HHcCC-cCCCCCCCCCHHHHHHHHHHcC
Confidence            211  1122221 11111 2222233455577777777765

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.76  E-value=4.7e-18  Score=140.29  Aligned_cols=74  Identities=24%  Similarity=0.267  Sum_probs=63.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||+|+||+++.++.++++|||++......    ....++..|+|||.+.   ...++.++||||||+++||++||+.
T Consensus       137 ~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~  212 (307)
T cd06607         137 IHRDIKAGNILLTEPGTVKLADFGSASLVSPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  212 (307)
T ss_pred             eecCCCcccEEECCCCCEEEeecCcceecCCC----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCC
Confidence            99999999999999999999999998765432    2345678899999874   3567889999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       213 p  213 (307)
T cd06607         213 P  213 (307)
T ss_pred             C
Confidence            8

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.76  E-value=9.7e-19  Score=142.32  Aligned_cols=84  Identities=20%  Similarity=0.212  Sum_probs=67.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCC-cCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK-VAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~e  161 (208)
                      .|||..  +|+||+|+||+++.++.+|++|||++..............++..|+|||.+.... .+.++||||||++++|
T Consensus       114 ~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~  193 (284)
T cd07860         114 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE  193 (284)
T ss_pred             HHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHH
Confidence            344444  9999999999999999999999999876543322223335678899999876544 5788999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      ++||+.|
T Consensus       194 l~tg~~p  200 (284)
T cd07860         194 MVTRRAL  200 (284)
T ss_pred             HHHCCCC
Confidence            9999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.5e-18  Score=137.32  Aligned_cols=80  Identities=25%  Similarity=0.265  Sum_probs=68.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .++|..  +|+||+|+||+++.++.++++|||+++....    .....++..|++||.......+.++||||+|++++|+
T Consensus       111 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l  186 (260)
T cd05611         111 EDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEF  186 (260)
T ss_pred             HHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHH
Confidence            455555  9999999999999999999999998876432    2234577889999998877788999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       187 ~~g~~p  192 (260)
T cd05611         187 LFGYPP  192 (260)
T ss_pred             HHCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.75  E-value=4.8e-19  Score=133.26  Aligned_cols=78  Identities=19%  Similarity=0.244  Sum_probs=65.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|||+||.|++++.+++.|++|||+++...-...-......|.+|.+|.++.+. .+++..|+||-||++.|+..--.|
T Consensus       123 lhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrp  201 (292)
T KOG0662|consen  123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  201 (292)
T ss_pred             hhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCC
Confidence            999999999999999999999999998776543334455678999999988754 468999999999999999864445

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.75  E-value=1.3e-18  Score=141.70  Aligned_cols=84  Identities=20%  Similarity=0.206  Sum_probs=70.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccC-CcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~  160 (208)
                      .+||..  +|+|++|+||++++++.+|++|||++........ ......++..|+|||.+... ..+.++|+||||++++
T Consensus       114 ~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~  193 (288)
T cd07833         114 AYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMA  193 (288)
T ss_pred             HHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHH
Confidence            344444  9999999999999999999999999887654422 23345678889999998877 7889999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ++++|+.|
T Consensus       194 ~l~~g~~~  201 (288)
T cd07833         194 ELLDGEPL  201 (288)
T ss_pred             HHHhCCCC
Confidence            99999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.75  E-value=2.4e-18  Score=137.46  Aligned_cols=84  Identities=18%  Similarity=0.172  Sum_probs=67.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .++|.+  +||||+|+||+++.++.+|++|||++........  .......+..|+|||.+..+.++.++|+||+|++++
T Consensus       107 ~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~  186 (251)
T cd05041         107 EYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLW  186 (251)
T ss_pred             HHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHH
Confidence            455655  9999999999999999999999999876543211  111123356799999988888899999999999999


Q ss_pred             HHHc-CCCC
Q 039937          161 EVMK-GKHP  168 (208)
Q Consensus       161 ellt-g~~p  168 (208)
                      |++| |..|
T Consensus       187 ~l~t~~~~p  195 (251)
T cd05041         187 ETFSLGDTP  195 (251)
T ss_pred             HHHhccCCC
Confidence            9999 7777

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.75  E-value=3.2e-18  Score=137.50  Aligned_cols=83  Identities=29%  Similarity=0.340  Sum_probs=68.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC----ccccccccccccccccccCC---cCcccchHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN----RTELAGTYGYIALELTYTLK---VAKKCGMHSSG  156 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~S~G  156 (208)
                      +||+.  +|+||+|.||++++++.+|++|||++.........    .....++..|++||.+....   .+.++||||||
T Consensus       114 ~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G  193 (264)
T cd06626         114 YLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG  193 (264)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHH
Confidence            44443  99999999999999999999999998876543211    11345778999999987665   78999999999


Q ss_pred             HHHHHHHcCCCC
Q 039937          157 LLALEVMKGKHP  168 (208)
Q Consensus       157 vvl~elltg~~p  168 (208)
                      ++++|+++|+.|
T Consensus       194 ~il~~l~~g~~p  205 (264)
T cd06626         194 CVVLEMATGKRP  205 (264)
T ss_pred             HHHHHHHhCCCC
Confidence            999999999999

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.75  E-value=4.2e-18  Score=137.94  Aligned_cols=119  Identities=18%  Similarity=0.165  Sum_probs=79.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +++|..  +||||||+||++++++.+|++|||++........ ......+..|+|||++....++.++|+||||++++|+
T Consensus       126 ~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el  204 (270)
T cd05047         126 DYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI  204 (270)
T ss_pred             HHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhh-ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHH
Confidence            556655  9999999999999999999999998753221111 1112235679999999888889999999999999999


Q ss_pred             Hc-CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MK-GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 lt-g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++ |+.|.  ....+.......... . + ....+...+..+...|++
T Consensus       205 ~~~g~~pf~~~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~~li~~~l~  249 (270)
T cd05047         205 VSLGGTPYCGMTCAELYEKLPQGYR-L-E-KPLNCDDEVYDLMRQCWR  249 (270)
T ss_pred             HcCCCCCccccCHHHHHHHHhCCCC-C-C-CCCcCCHHHHHHHHHHcc
Confidence            97 88882  222222222211111 1 1 122233466677777764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.75  E-value=1.7e-18  Score=143.00  Aligned_cols=78  Identities=24%  Similarity=0.184  Sum_probs=65.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||++..............++..|+|||.+.. ..++.++||||+|++++|+++|+.|
T Consensus       130 ~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~  208 (309)
T cd07845         130 IHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPL  208 (309)
T ss_pred             ecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999876544222233345778999998764 4568999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.75  E-value=5.2e-18  Score=138.62  Aligned_cols=78  Identities=28%  Similarity=0.336  Sum_probs=65.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccC--CcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTL--KVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||+|+||+++.++.+|++|||++...... ........++..|++||.+...  ..+.++||||||++++++++|+.
T Consensus       127 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~  206 (290)
T cd05613         127 IYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGAS  206 (290)
T ss_pred             eccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999998765433 1222234578899999988643  45788999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       207 p  207 (290)
T cd05613         207 P  207 (290)
T ss_pred             C
Confidence            8

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.75  E-value=5.3e-18  Score=136.60  Aligned_cols=78  Identities=26%  Similarity=0.351  Sum_probs=65.5

Q ss_pred             hhcCcCCCceeeCCCC-cEEEcccceeeeecCCC----CCccccccccccccccccccCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +|+||+|+||+++.++ .+|++|||.+.......    .......++..|+|||.+.....+.++|+||+|++++++++|
T Consensus       125 ~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g  204 (268)
T cd06630         125 IHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATA  204 (268)
T ss_pred             ecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhC
Confidence            9999999999998775 58999999987765431    112234578899999998877888999999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       205 ~~p  207 (268)
T cd06630         205 KPP  207 (268)
T ss_pred             CCC
Confidence            998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.75  E-value=2.6e-18  Score=140.10  Aligned_cols=78  Identities=27%  Similarity=0.375  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|++||.+....++.++|+||||++++++++|+.|
T Consensus       138 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p  215 (286)
T cd06614         138 IHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPP  215 (286)
T ss_pred             eeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999876554332222334577889999998888889999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.75  E-value=2.8e-18  Score=143.59  Aligned_cols=83  Identities=22%  Similarity=0.206  Sum_probs=68.0

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||..  +||||||+||+++.++.+||+|||+++.............++..|+|||.+.. ..++.++|+||||++++++
T Consensus       123 ~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  202 (337)
T cd07858         123 YIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAEL  202 (337)
T ss_pred             HHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHH
Confidence            44444  99999999999999999999999998876543222233457888999998764 4678999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       203 ~~g~~p  208 (337)
T cd07858         203 LGRKPL  208 (337)
T ss_pred             HcCCCC
Confidence            999988

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.75  E-value=5.3e-18  Score=140.72  Aligned_cols=74  Identities=24%  Similarity=0.260  Sum_probs=63.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||+|+||+++.++.++++|||++......    ....++..|+|||.+.   ...++.++||||||++++|+++|+.
T Consensus       147 ~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~  222 (317)
T cd06635         147 IHRDIKAGNILLTEPGQVKLADFGSASIASPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  222 (317)
T ss_pred             ccCCCCcccEEECCCCCEEEecCCCccccCCc----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999987654322    2345788999999874   4567899999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       223 p  223 (317)
T cd06635         223 P  223 (317)
T ss_pred             C
Confidence            8

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.75  E-value=8.5e-19  Score=145.77  Aligned_cols=77  Identities=19%  Similarity=0.268  Sum_probs=69.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcC-cccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVA-KKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|||||.+|||||+++.+||+|||++.++... ....+++|++-|.+||...+..+. +..|.||+||+||.|+.|-.|
T Consensus       175 vHRDLKLENILLD~N~NiKIADFGLSNly~~~-kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMP  252 (668)
T KOG0611|consen  175 VHRDLKLENILLDQNNNIKIADFGLSNLYADK-KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMP  252 (668)
T ss_pred             eecccchhheeecCCCCeeeeccchhhhhccc-cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccc
Confidence            99999999999999999999999999877654 345678999999999998877764 889999999999999999999

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.75  E-value=3.8e-18  Score=137.68  Aligned_cols=84  Identities=23%  Similarity=0.247  Sum_probs=67.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC-----cEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY-----EARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSS  155 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~-----~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~  155 (208)
                      .++|..  +|+||||+||+++.+.     .++++|||+++......  .......++..|+|||.+..+.++.++|||||
T Consensus       120 ~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  199 (269)
T cd05044         120 VYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSF  199 (269)
T ss_pred             HHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHH
Confidence            455554  9999999999999877     89999999987654321  11122344678999999988889999999999


Q ss_pred             HHHHHHHHc-CCCC
Q 039937          156 GLLALEVMK-GKHP  168 (208)
Q Consensus       156 Gvvl~ellt-g~~p  168 (208)
                      |++++|++| |+.|
T Consensus       200 G~il~ellt~g~~p  213 (269)
T cd05044         200 GVLMWEILTLGQQP  213 (269)
T ss_pred             HHHHHHHHHcCCCC
Confidence            999999998 8888

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.75  E-value=1.3e-18  Score=139.93  Aligned_cols=82  Identities=23%  Similarity=0.320  Sum_probs=69.0

Q ss_pred             HHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .++|. .  +|+||||+||+++.++.++++|||.+.........  ...++..|++||......++.++||||+|+++++
T Consensus       114 ~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~  191 (265)
T cd06605         114 TYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIE  191 (265)
T ss_pred             HHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence            45555 3  99999999999999999999999988665432111  1567789999999988888999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       192 l~~g~~p  198 (265)
T cd06605         192 LATGRFP  198 (265)
T ss_pred             HHhCCCC
Confidence            9999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.75  E-value=4.6e-18  Score=137.51  Aligned_cols=117  Identities=19%  Similarity=0.208  Sum_probs=80.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCC--cCcccchHHHHHHHHHHHcCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLK--VAKKCGMHSSGLLALEVMKGK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~elltg~  166 (208)
                      +||||+|+||+++.++.++++|||+++.....  ........++..|++||.+....  ++.++|+||+|++++|+++|+
T Consensus       130 ~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~  209 (272)
T cd06629         130 LHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR  209 (272)
T ss_pred             eecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCC
Confidence            99999999999999999999999998765432  11123345788999999887544  789999999999999999999


Q ss_pred             CCcc--cHHHHHHhhcCCCC--CCccccCCCCCchHHHHhccccC
Q 039937          167 HPRH--FIFSICSSSSNFVI--APHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~~--~l~~~~~~~~~~~~--~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|..  ..............  ...+.+.+.+...+.++...|++
T Consensus       210 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  254 (272)
T cd06629         210 RPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFT  254 (272)
T ss_pred             CCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhc
Confidence            9932  22222222111110  12223334445566666666654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.75  E-value=3.2e-18  Score=139.42  Aligned_cols=82  Identities=23%  Similarity=0.299  Sum_probs=68.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      .++|+.  +||||||+||+++.++.++++|||++.......  .....|+..|+|||.+..+ .++.++|+||+|++++|
T Consensus       111 ~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~  188 (278)
T cd05606         111 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK  188 (278)
T ss_pred             HHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHH
Confidence            456655  999999999999999999999999987553321  1234688999999998744 57899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       189 l~~g~~p  195 (278)
T cd05606         189 LLRGHSP  195 (278)
T ss_pred             HHhCCCC
Confidence            9999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.75  E-value=7.1e-18  Score=134.90  Aligned_cols=118  Identities=19%  Similarity=0.192  Sum_probs=82.0

Q ss_pred             Hhhhh--hhcCcCCCceeeCCC-CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++|..  +|+||+|+||+++.+ ..+|++|||++........ .....++..|+|||.+.....+.++||||||++++++
T Consensus       116 ~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l  194 (256)
T cd08220         116 HVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYEL  194 (256)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHH
Confidence            44443  999999999999854 5689999999987654321 1234578899999999888888999999999999999


Q ss_pred             HcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+.|  ..+....+.......  . ..+...+...+.++...|++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~l~~li~~~l~  238 (256)
T cd08220         195 ASLKRAFEAANLPALVLKIMSGT--F-APISDRYSPDLRQLILSMLN  238 (256)
T ss_pred             HhCCCCcccCchHHHHHHHHhcC--C-CCCCCCcCHHHHHHHHHHcc
Confidence            999998  223333333332221  1 11222344456666666654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.75  E-value=1.7e-18  Score=145.71  Aligned_cols=77  Identities=19%  Similarity=0.198  Sum_probs=67.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||+++....... .....++..|+|||.+....++.++||||+|+++++|++|+.|
T Consensus       140 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~p  216 (353)
T cd07850         140 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVL  216 (353)
T ss_pred             eeCCCCHHHEEECCCCCEEEccCccceeCCCCCC-CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCC
Confidence            9999999999999999999999999987654321 2234578899999999888899999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.74  E-value=4.4e-18  Score=146.03  Aligned_cols=115  Identities=15%  Similarity=0.112  Sum_probs=79.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||++++++.+|++|||+++......  .......++..|++||.+....++.++||||||++++|+++ |+.
T Consensus       261 vHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~  340 (401)
T cd05107         261 VHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGT  340 (401)
T ss_pred             CcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCC
Confidence            899999999999999999999999998654321  11223346778999999988888999999999999999998 887


Q ss_pred             Ccc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..  ...+.....+...  ......+.....+.++...|++
T Consensus       341 P~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~l~~li~~cl~  380 (401)
T cd05107         341 PYPELPMNEQFYNAIKRG--YRMAKPAHASDEIYEIMQKCWE  380 (401)
T ss_pred             CCCCCCchHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHcC
Confidence            732  2222222222211  1111222334566777777764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.74  E-value=2.3e-18  Score=140.84  Aligned_cols=84  Identities=17%  Similarity=0.146  Sum_probs=67.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+||..  +||||+|+||+++. ++.+|++|||+++.............+++.|+|||.+.. ..++.++|+||||++++
T Consensus       124 ~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~  203 (295)
T cd07837         124 AHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFA  203 (295)
T ss_pred             HHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHH
Confidence            344444  99999999999998 899999999998765433222223356788999998764 45689999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       204 ~l~~g~~~  211 (295)
T cd07837         204 EMSRKQPL  211 (295)
T ss_pred             HHHcCCCC
Confidence            99999988

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.74  E-value=2.2e-18  Score=158.17  Aligned_cols=83  Identities=27%  Similarity=0.293  Sum_probs=66.6

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeec--------------C----CCCCccccccccccccccccccC-
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFK--------------L----DSSNRTELAGTYGYIALELTYTL-  144 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~--------------~----~~~~~~~~~g~~~y~aPE~~~~~-  144 (208)
                      |+|+.  |||||||.||+||++..+||.|||++....              .    +....+...||.-|+|||.+... 
T Consensus       712 YIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~  791 (1351)
T KOG1035|consen  712 YIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS  791 (1351)
T ss_pred             HHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence            44444  999999999999999999999999998621              0    01134567899999999998744 


Q ss_pred             --CcCcccchHHHHHHHHHHHcCCCC
Q 039937          145 --KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       145 --~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                        +++.|.|+||+|||++||+.-..+
T Consensus       792 ~~~Yn~KiDmYSLGIVlFEM~yPF~T  817 (1351)
T KOG1035|consen  792 SNKYNSKIDMYSLGIVLFEMLYPFGT  817 (1351)
T ss_pred             cccccchhhhHHHHHHHHHHhccCCc
Confidence              599999999999999999865333

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.74  E-value=3.7e-18  Score=138.36  Aligned_cols=74  Identities=26%  Similarity=0.332  Sum_probs=65.7

Q ss_pred             hhcCcCCCceeeCCCC-cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++ .++++|||++.......    ...++..|+|||.+....++.++||||+|++++|+++|+.|
T Consensus       131 ~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p  205 (267)
T PHA03390        131 IHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHP  205 (267)
T ss_pred             eeCCCCHHHEEEeCCCCeEEEecCccceecCCCc----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            9999999999999988 99999999987654322    23578899999999888889999999999999999999999

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.74  E-value=4.9e-18  Score=136.34  Aligned_cols=118  Identities=22%  Similarity=0.212  Sum_probs=83.7

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||..  +|+||+|+||++++++.++++|||.+....... ......++..|++||.......+.++|+||+|+++++++
T Consensus       115 ~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  193 (258)
T cd05578         115 YLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECL  193 (258)
T ss_pred             HHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHH
Confidence            44443  999999999999999999999999987655432 223346778899999998888899999999999999999


Q ss_pred             cCCCCcc--c--HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          164 KGKHPRH--F--IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       164 tg~~p~~--~--l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+.|..  .  ...+.......   ....+.+.+...+.++...|++
T Consensus       194 ~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~  238 (258)
T cd05578         194 RGKRPYRGHSRTIRDQIRAKQET---ADVLYPATWSTEAIDAINKLLE  238 (258)
T ss_pred             hCCCCCCCCCccHHHHHHHHhcc---ccccCcccCcHHHHHHHHHHcc
Confidence            9999922  1  12333222221   1122334444566666666654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.74  E-value=2.5e-18  Score=140.73  Aligned_cols=84  Identities=20%  Similarity=0.197  Sum_probs=66.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~  160 (208)
                      ++||+.  +||||+|+||+++. +..+|++|||++..............++..|++||.+.. ..++.++||||+|++++
T Consensus       116 ~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~  195 (294)
T PLN00009        116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFA  195 (294)
T ss_pred             HHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence            344444  99999999999985 567899999999765443222233456789999998765 35688999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      +++||+.|
T Consensus       196 ~l~tg~~p  203 (294)
T PLN00009        196 EMVNQKPL  203 (294)
T ss_pred             HHHhCCCC
Confidence            99999988

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=6e-18  Score=134.89  Aligned_cols=118  Identities=20%  Similarity=0.249  Sum_probs=84.2

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      ++|..  +||||+|+||+++.++.++++|||.+..............++..|++||.......+.++|+||+|+++++++
T Consensus       114 ~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~  193 (254)
T cd06627         114 YLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL  193 (254)
T ss_pred             HHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHH
Confidence            44444  9999999999999999999999999987765433333456788999999987777889999999999999999


Q ss_pred             cCCCCccc---HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          164 KGKHPRHF---IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       164 tg~~p~~~---l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+.|...   ...... ....   ....+.+.+...+..+..+|++
T Consensus       194 ~g~~p~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~i~~~l~  236 (254)
T cd06627         194 TGNPPYYDLNPMAALFR-IVQD---DHPPLPEGISPELKDFLMQCFQ  236 (254)
T ss_pred             hCCCCCCCccHHHHHHH-Hhcc---CCCCCCCCCCHHHHHHHHHHHh
Confidence            99998221   111111 1111   2223344455566666666653

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.74  E-value=4.8e-18  Score=139.56  Aligned_cols=78  Identities=26%  Similarity=0.365  Sum_probs=67.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|++||......++.++|+||+|++++|+++|+.|
T Consensus       138 vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p  215 (292)
T cd06657         138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP  215 (292)
T ss_pred             ecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999887655432222334678899999998877888999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.74  E-value=7.9e-18  Score=134.49  Aligned_cols=84  Identities=20%  Similarity=0.252  Sum_probs=69.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ++||..  +||||+|+||+++.++.+|++|||.+.......  .......++..|+|||.+.....+.++||||+|++++
T Consensus       119 ~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  198 (262)
T cd00192         119 EYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLW  198 (262)
T ss_pred             HHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHH
Confidence            455554  999999999999999999999999998766432  2223345678899999988778899999999999999


Q ss_pred             HHHc-CCCC
Q 039937          161 EVMK-GKHP  168 (208)
Q Consensus       161 ellt-g~~p  168 (208)
                      |+++ |+.|
T Consensus       199 ~l~~~g~~p  207 (262)
T cd00192         199 EIFTLGATP  207 (262)
T ss_pred             HHHhcCCCC
Confidence            9999 5888

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1.7e-18  Score=150.16  Aligned_cols=83  Identities=22%  Similarity=0.218  Sum_probs=72.5

Q ss_pred             hHHHhhhh--hhcCcCCCceee-CCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLL-DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nill-d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      -.++||.+  +|||+||+|||+ ++.++++|+|||.++.....   ..+.+-|..|.|||......++..+|+||+|++|
T Consensus       427 Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlL  503 (612)
T KOG0603|consen  427 AVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLL  503 (612)
T ss_pred             HHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh---hcccchhhcccChhhhccCCCCcchhhHHHHHHH
Confidence            34566666  999999999999 58999999999999987754   3344568899999999988899999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      |+|++|+.|
T Consensus       504 y~ML~G~tp  512 (612)
T KOG0603|consen  504 YEMLTGRTL  512 (612)
T ss_pred             HHHHhCCCc
Confidence            999999998

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.74  E-value=8.4e-18  Score=133.38  Aligned_cols=77  Identities=27%  Similarity=0.362  Sum_probs=67.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||+|+||+++.++.++|+|||.+........ .....++..|++||.......+.++|+||||++++++++|+.|
T Consensus       120 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p  196 (253)
T cd05122         120 IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPP  196 (253)
T ss_pred             ecCCCCHHHEEEccCCeEEEeecccccccccccc-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999998877654432 2345678899999999877888999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.74  E-value=2.2e-18  Score=144.52  Aligned_cols=75  Identities=23%  Similarity=0.289  Sum_probs=64.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||+++.....   .....++..|+|||.+.. ..++.++||||||++++|+++|+.|
T Consensus       139 ~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~p  214 (342)
T cd07879         139 IHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTL  214 (342)
T ss_pred             ccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998764322   123456788999998765 4578899999999999999999998

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.74  E-value=2.7e-18  Score=138.13  Aligned_cols=80  Identities=20%  Similarity=0.166  Sum_probs=62.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCc--------EEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYE--------ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMH  153 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~--------~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~  153 (208)
                      .|+|..  +||||||+||+++.++.        ++++|||++......    ....++..|+|||.+.. ..++.++|||
T Consensus       114 ~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Diw  189 (258)
T cd05078         114 HFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK----EILLERIPWVPPECIENPQNLSLAADKW  189 (258)
T ss_pred             HHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCc----hhccccCCccCchhccCCCCCCchhhHH
Confidence            344444  99999999999987765        588888877654322    23456788999999876 3478899999


Q ss_pred             HHHHHHHHHHcCC-CC
Q 039937          154 SSGLLALEVMKGK-HP  168 (208)
Q Consensus       154 S~Gvvl~elltg~-~p  168 (208)
                      |||++++|+++|. .|
T Consensus       190 slG~~l~~l~~g~~~~  205 (258)
T cd05078         190 SFGTTLWEIFSGGDKP  205 (258)
T ss_pred             HHHHHHHHHHcCCCCC
Confidence            9999999999985 44

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.74  E-value=4.3e-18  Score=138.12  Aligned_cols=83  Identities=23%  Similarity=0.230  Sum_probs=67.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC---ccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +||..  +|+||||+||+++.++.++++|||.+.........   .....++..|++||......++.++|+||||++++
T Consensus       124 ~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~  203 (284)
T cd05038         124 YLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLY  203 (284)
T ss_pred             HHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhh
Confidence            44443  99999999999999999999999999876533111   11223455699999998888899999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      |+++|+.|
T Consensus       204 el~tg~~p  211 (284)
T cd05038         204 ELFTYGDP  211 (284)
T ss_pred             eeeccCCC
Confidence            99999988

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=2.7e-18  Score=152.64  Aligned_cols=78  Identities=23%  Similarity=0.319  Sum_probs=68.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccc--cccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTE--LAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||...|||+.....+|+.|||+++....+......  ....+.|||-|.+....++.++|||||||++||++| |.+
T Consensus       820 VHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~  899 (1177)
T KOG1025|consen  820 VHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAK  899 (1177)
T ss_pred             hhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCC
Confidence            99999999999999999999999999998776333322  233567999999999999999999999999999998 999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       900 P  900 (1177)
T KOG1025|consen  900 P  900 (1177)
T ss_pred             c
Confidence            9

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.74  E-value=1.1e-17  Score=138.76  Aligned_cols=74  Identities=24%  Similarity=0.237  Sum_probs=63.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +|+||+|+||+++.++.+|++|||++.....    .....++..|+|||.+.   ...++.++||||||++++|+++|+.
T Consensus       143 ~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~  218 (313)
T cd06633         143 IHRDIKAGNILLTEPGQVKLADFGSASKSSP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  218 (313)
T ss_pred             ecCCCChhhEEECCCCCEEEeecCCCcccCC----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999998764322    22346788999999874   3567889999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       219 p  219 (313)
T cd06633         219 P  219 (313)
T ss_pred             C
Confidence            8

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.74  E-value=3.2e-18  Score=143.83  Aligned_cols=75  Identities=21%  Similarity=0.302  Sum_probs=64.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||++......   .....++..|+|||.+.. ...+.++||||+|++++|+++|+.|
T Consensus       142 vH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~p  217 (345)
T cd07877         142 IHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL  217 (345)
T ss_pred             eecCCChHHEEEcCCCCEEEeccccccccccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998764332   223456888999998765 4578899999999999999999988

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.74  E-value=1.4e-17  Score=133.75  Aligned_cols=113  Identities=17%  Similarity=0.139  Sum_probs=79.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC--
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP--  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p--  168 (208)
                      +|+||+|+||++++ ..++++|||+++.............++..|++||......++.++|+||||++++++++|+.|  
T Consensus       128 ~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~  206 (260)
T cd08222         128 LHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE  206 (260)
T ss_pred             cccCCChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            99999999999986 469999999988765443333345678899999998877788899999999999999999998  


Q ss_pred             cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..............   ....++......+..+..+|++
T Consensus       207 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~  242 (260)
T cd08222         207 GQNFLSVVLRIVEG---PTPSLPETYSRQLNSIMQSMLN  242 (260)
T ss_pred             CccHHHHHHHHHcC---CCCCCcchhcHHHHHHHHHHhc
Confidence            22233333332221   1122233444456666666653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.73  E-value=2.4e-18  Score=140.77  Aligned_cols=84  Identities=24%  Similarity=0.208  Sum_probs=68.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      ++||..  +|+||||+||+++.++.+|++|||++..............++..|+|||.+... ..+.++|+||+|++++|
T Consensus       120 ~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~  199 (293)
T cd07843         120 AHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAE  199 (293)
T ss_pred             HHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHH
Confidence            344544  999999999999999999999999988765542222334567889999987654 35889999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       200 l~~g~~~  206 (293)
T cd07843         200 LLTKKPL  206 (293)
T ss_pred             HHhCCCC
Confidence            9999987

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.73  E-value=7e-18  Score=139.44  Aligned_cols=80  Identities=24%  Similarity=0.250  Sum_probs=66.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl  159 (208)
                      .++|..  +||||+|+||+++.++.++++|||++......    ....++..|+|||.+.   ....+.++||||||+++
T Consensus       129 ~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il  204 (308)
T cd06634         129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  204 (308)
T ss_pred             HHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHH
Confidence            344443  99999999999999999999999998765432    2345778999999874   34578899999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +|+++|+.|
T Consensus       205 ~el~~g~~p  213 (308)
T cd06634         205 IELAERKPP  213 (308)
T ss_pred             HHHHcCCCC
Confidence            999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.73  E-value=8.3e-18  Score=135.88  Aligned_cols=80  Identities=23%  Similarity=0.165  Sum_probs=63.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCc-------EEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYE-------ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHS  154 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~-------~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S  154 (208)
                      +|||..  +||||||.||+++.++.       ++++|||++......    ....++..|+|||.+. ...++.++||||
T Consensus       119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Diws  194 (262)
T cd05077         119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWS  194 (262)
T ss_pred             HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHH
Confidence            445544  99999999999986654       899999988654322    2235678899999886 456789999999


Q ss_pred             HHHHHHHHH-cCCCC
Q 039937          155 SGLLALEVM-KGKHP  168 (208)
Q Consensus       155 ~Gvvl~ell-tg~~p  168 (208)
                      ||+++||++ +|+.|
T Consensus       195 lG~~l~el~~~~~~p  209 (262)
T cd05077         195 FGTTLWEICYNGEIP  209 (262)
T ss_pred             HHHHHHHHHhCCCCC
Confidence            999999998 57777

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.73  E-value=3.3e-18  Score=133.98  Aligned_cols=78  Identities=22%  Similarity=0.168  Sum_probs=63.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CC-----Cccccccccccccccccc---cCCcCcccchHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SS-----NRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLL  158 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~-----~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvv  158 (208)
                      .||||||.|||+.+.+.+++.|||.+....-.    ..     .......|..|.|||.+.   +...++++||||+||+
T Consensus       151 AH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCt  230 (302)
T KOG2345|consen  151 AHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCT  230 (302)
T ss_pred             cccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHH
Confidence            89999999999999999999999987654321    00     111224688999999875   4567899999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      +|+|+.|..|
T Consensus       231 LYa~mf~~sP  240 (302)
T KOG2345|consen  231 LYAMMFGESP  240 (302)
T ss_pred             HHHHHHcCCc
Confidence            9999999999

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.73  E-value=5.6e-18  Score=141.55  Aligned_cols=78  Identities=26%  Similarity=0.229  Sum_probs=65.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----CCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+||+++.++.+|++|||+++......    .......++..|++||.+.. ..++.++||||||++++|+++|
T Consensus       129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g  208 (334)
T cd07855         129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGR  208 (334)
T ss_pred             ecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcC
Confidence            999999999999999999999999998764331    11223467889999998754 4578999999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       209 ~~p  211 (334)
T cd07855         209 RQL  211 (334)
T ss_pred             CCc
Confidence            988

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.73  E-value=2.3e-17  Score=131.56  Aligned_cols=114  Identities=18%  Similarity=0.151  Sum_probs=84.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC--
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP--  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p--  168 (208)
                      +|+||+|+||+++.++.++++|||++..............++..|++||.......+.++|+||+|++++++++|+.|  
T Consensus       125 ~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~  204 (258)
T cd08215         125 LHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE  204 (258)
T ss_pred             ecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCC
Confidence            999999999999999999999999988765443233344678889999998888889999999999999999999999  


Q ss_pred             cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .....+.........   ...+.......+..+..+|++
T Consensus       205 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~  240 (258)
T cd08215         205 GENLLELALKILKGQ---YPPIPSQYSSELRNLVSSLLQ  240 (258)
T ss_pred             CCcHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHcC
Confidence            223334443333221   122233445566677777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.73  E-value=3.6e-18  Score=145.05  Aligned_cols=77  Identities=25%  Similarity=0.345  Sum_probs=70.1

Q ss_pred             hhcCcCCCceeeCCC----CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCC
Q 039937           91 ISFTTSSKNGLLDLE----YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~----~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~  166 (208)
                      +|||+||+|+|+...    +.+|++|||++..... .......+||+.|+|||.+....++...||||.|+++|.|+.|.
T Consensus       157 vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~  235 (382)
T KOG0032|consen  157 VHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGV  235 (382)
T ss_pred             eeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCC
Confidence            999999999999643    4799999999999877 44566789999999999999899999999999999999999999


Q ss_pred             CC
Q 039937          167 HP  168 (208)
Q Consensus       167 ~p  168 (208)
                      .|
T Consensus       236 ~P  237 (382)
T KOG0032|consen  236 PP  237 (382)
T ss_pred             CC
Confidence            99

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.72  E-value=4.4e-18  Score=139.93  Aligned_cols=78  Identities=19%  Similarity=0.179  Sum_probs=64.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-----------Ccccccccccccccccccc-CCcCcccchHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-----------NRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLL  158 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvv  158 (208)
                      +|+||||+||++++++.++++|||++........           ......++..|+|||.+.. ..++.++||||||++
T Consensus       137 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  216 (311)
T cd07866         137 LHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV  216 (311)
T ss_pred             ecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH
Confidence            9999999999999999999999999876543211           1123356788999998764 457889999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++|+++|+.|
T Consensus       217 l~el~~g~~~  226 (311)
T cd07866         217 FAEMFTRRPI  226 (311)
T ss_pred             HHHHHhCCCC
Confidence            9999999988

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.72  E-value=1.7e-17  Score=133.51  Aligned_cols=83  Identities=28%  Similarity=0.350  Sum_probs=70.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .++|+.  +|+||+|+||+++.++.++++|||++....... ......++..|++||.+....++.++|+||+|++++|+
T Consensus       107 ~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l  185 (262)
T cd05572         107 EYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYEL  185 (262)
T ss_pred             HHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHH
Confidence            456655  999999999999999999999999988765432 12234578899999998888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       186 ~~g~~p  191 (262)
T cd05572         186 LTGRPP  191 (262)
T ss_pred             HhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.72  E-value=3.3e-17  Score=130.43  Aligned_cols=121  Identities=17%  Similarity=0.161  Sum_probs=85.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+||+.  +|+||+|+||+++.++.++++|||.+........  ......++..|++||.......+.++||||+|++++
T Consensus       115 ~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~  194 (260)
T cd06606         115 AYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVI  194 (260)
T ss_pred             HHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHH
Confidence            345544  9999999999999999999999999987765432  133456788999999998888899999999999999


Q ss_pred             HHHcCCCCccc---HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHPRHF---IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p~~~---l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++++|+.|...   ....+.......  ....+...+.....++..+|++
T Consensus       195 ~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~  242 (260)
T cd06606         195 EMATGKPPWSELGNPMAALYKIGSSG--EPPEIPEHLSEEAKDFLRKCLR  242 (260)
T ss_pred             HHHhCCCCCCCCCchHHHHHhccccC--CCcCCCcccCHHHHHHHHHhCc
Confidence            99999999322   122222222111  2222333344566666667764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.72  E-value=8.6e-18  Score=136.66  Aligned_cols=84  Identities=20%  Similarity=0.202  Sum_probs=67.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      ++||..  +||||+|+||+++.++.++++|||++..............++..|+|||.+... .++.++|+||||++++|
T Consensus       113 ~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~  192 (283)
T cd07835         113 AYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAE  192 (283)
T ss_pred             HHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHH
Confidence            445544  999999999999999999999999987654332222233457889999987653 46889999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       193 l~~g~~p  199 (283)
T cd07835         193 MVNRRPL  199 (283)
T ss_pred             HHhCCCC
Confidence            9999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.72  E-value=4.5e-17  Score=130.14  Aligned_cols=114  Identities=17%  Similarity=0.143  Sum_probs=79.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcc-ccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRT-ELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +|+||||+||++++++.++++|||++........... ...++..|++||.......+.++|+||+|++++|+++ |+.|
T Consensus       125 ~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p  204 (258)
T smart00219      125 IHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESP  204 (258)
T ss_pred             eecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999987654411111 2236678999999988888999999999999999998 6777


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ....+.........  .. .........+.++..+|++
T Consensus       205 ~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~i~~~l~  242 (258)
T smart00219      205 YPGMSNEEVLEYLKKGY--RL-PKPENCPPEIYKLMLQCWA  242 (258)
T ss_pred             CCCCCHHHHHHHHhcCC--CC-CCCCcCCHHHHHHHHHHCc
Confidence            2  23333333332222  11 1122244466666666654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=3.6e-18  Score=135.86  Aligned_cols=76  Identities=22%  Similarity=0.217  Sum_probs=65.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~  166 (208)
                      +||||||.|+|++.+-..||+|||+++....+ ....+....|..|.|||.+.+ ..++...||||.||++.|++.++
T Consensus       178 LHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRr  255 (449)
T KOG0664|consen  178 LHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRK  255 (449)
T ss_pred             hhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhh
Confidence            99999999999999999999999999987655 334455567889999998874 56899999999999999998655

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.71  E-value=1.6e-17  Score=134.40  Aligned_cols=78  Identities=27%  Similarity=0.399  Sum_probs=66.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--------------------CCccccccccccccccccccCCcCccc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--------------------SNRTELAGTYGYIALELTYTLKVAKKC  150 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~  150 (208)
                      +|+||+|+||+++.++.++++|||++.......                    .......++..|++||.......+.++
T Consensus       124 ~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~  203 (280)
T cd05581         124 IHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSS  203 (280)
T ss_pred             eecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhh
Confidence            999999999999999999999999987654331                    111234567889999998888889999


Q ss_pred             chHHHHHHHHHHHcCCCC
Q 039937          151 GMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       151 Dv~S~Gvvl~elltg~~p  168 (208)
                      |+||+|++++++++|+.|
T Consensus       204 Di~slG~~l~~l~~g~~p  221 (280)
T cd05581         204 DLWALGCIIYQMLTGKPP  221 (280)
T ss_pred             hHHHHHHHHHHHHhCCCC
Confidence            999999999999999999

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.71  E-value=2.2e-17  Score=134.79  Aligned_cols=84  Identities=30%  Similarity=0.340  Sum_probs=67.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCC--cCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLK--VAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl  159 (208)
                      ++||..  +||||+|.||+++.++.++++|||+++...... .......++..|++||......  .+.++|+||||+++
T Consensus       119 ~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il  198 (288)
T cd05583         119 DHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT  198 (288)
T ss_pred             HHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHH
Confidence            344444  999999999999999999999999987654331 1222345788999999876554  67899999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +|+++|+.|
T Consensus       199 ~el~tg~~p  207 (288)
T cd05583         199 FELLTGASP  207 (288)
T ss_pred             HHHHhCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.71  E-value=9.4e-18  Score=137.90  Aligned_cols=83  Identities=19%  Similarity=0.199  Sum_probs=66.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----CCccccccccccccccccccC-CcCcccchHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLL  158 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvv  158 (208)
                      +||..  +|+||||+||+++.++.+|++|||++.......    .......++..|+|||.+... ..+.++|+||||++
T Consensus       134 ~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  213 (310)
T cd07865         134 YIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI  213 (310)
T ss_pred             HHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHH
Confidence            44444  999999999999999999999999987664331    112234567889999987644 36789999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++|+++|+.|
T Consensus       214 l~el~t~~~~  223 (310)
T cd07865         214 MAEMWTRSPI  223 (310)
T ss_pred             HHHHHhCCCC
Confidence            9999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.71  E-value=7.7e-18  Score=136.89  Aligned_cols=84  Identities=18%  Similarity=0.236  Sum_probs=67.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      ++||..  +||||||+||++++++.++++|||++..............++..|++||.+.. ..++.++|+||+|++++|
T Consensus       114 ~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~  193 (284)
T cd07836         114 AFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAE  193 (284)
T ss_pred             HHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHH
Confidence            344544  99999999999999999999999998765433222233456788999998764 346789999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       194 l~~g~~~  200 (284)
T cd07836         194 MITGRPL  200 (284)
T ss_pred             HHhCCCC
Confidence            9999988

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.71  E-value=1.8e-17  Score=135.42  Aligned_cols=76  Identities=25%  Similarity=0.258  Sum_probs=65.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||+|.||+++.++.++++|||++........  ....++..|++||......++.++||||+|++++|+++|+.|
T Consensus       127 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p  202 (287)
T cd06621         127 IHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFP  202 (287)
T ss_pred             ccCCCCHHHEEEecCCeEEEeecccccccccccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999875543211  234567889999999888889999999999999999999998

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.71  E-value=7.7e-18  Score=140.79  Aligned_cols=84  Identities=25%  Similarity=0.258  Sum_probs=67.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-----CCcccccccccccccccccc-CCcCcccchHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-----SNRTELAGTYGYIALELTYT-LKVAKKCGMHSSG  156 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~G  156 (208)
                      .+||+.  +||||||+||+++.++.+|++|||++.......     .......++..|++||.+.. ...+.++|+||||
T Consensus       121 ~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG  200 (337)
T cd07852         121 KYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVG  200 (337)
T ss_pred             HHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHH
Confidence            344444  999999999999999999999999988654331     12233467889999998754 4567899999999


Q ss_pred             HHHHHHHcCCCC
Q 039937          157 LLALEVMKGKHP  168 (208)
Q Consensus       157 vvl~elltg~~p  168 (208)
                      ++++|+++|+.|
T Consensus       201 ~~l~el~tg~~p  212 (337)
T cd07852         201 CILGEMLLGKPL  212 (337)
T ss_pred             HHHHHHHhCCCC
Confidence            999999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.71  E-value=1.6e-17  Score=136.20  Aligned_cols=83  Identities=22%  Similarity=0.176  Sum_probs=67.0

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||..  +|+||+|+||+++.++.++|+|||++..............++..|+|||.+.. ..++.++|+||||++++|+
T Consensus       117 ~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~  196 (298)
T cd07841         117 YLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAEL  196 (298)
T ss_pred             HHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence            44443  89999999999999999999999999876554322333456788999998754 4568899999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|..|
T Consensus       197 ~~g~~~  202 (298)
T cd07841         197 LLRVPF  202 (298)
T ss_pred             HcCCcc
Confidence            999765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.71  E-value=1e-17  Score=139.91  Aligned_cols=85  Identities=24%  Similarity=0.264  Sum_probs=69.2

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----CCcccccccccccccccccc-CCcCcccchHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYT-LKVAKKCGMHSSG  156 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~G  156 (208)
                      .++||..  +||||||+||+++.++.+||+|||+++......    .......++..|+|||.... ...+.++|+||+|
T Consensus       118 L~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slG  197 (332)
T cd07857         118 LKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVG  197 (332)
T ss_pred             HHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHH
Confidence            3456655  999999999999999999999999998654321    11233467889999998764 4578999999999


Q ss_pred             HHHHHHHcCCCC
Q 039937          157 LLALEVMKGKHP  168 (208)
Q Consensus       157 vvl~elltg~~p  168 (208)
                      ++++++++|+.|
T Consensus       198 v~l~~l~~g~~p  209 (332)
T cd07857         198 CILAELLGRKPV  209 (332)
T ss_pred             HHHHHHHhCCcC
Confidence            999999999988

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.71  E-value=4.1e-17  Score=130.36  Aligned_cols=76  Identities=26%  Similarity=0.197  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||+|+||++++++.+|++|||++......  ......++..|++||......++.++|+||+|++++|+++|+.|
T Consensus       125 ~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p  200 (256)
T cd08530         125 LHRDLKSANILLVANDLVKIGDLGISKVLKKN--MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPP  200 (256)
T ss_pred             ccCCCCcceEEEecCCcEEEeeccchhhhccC--CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999999998876544  12234577899999999888888999999999999999999999

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.71  E-value=2e-17  Score=134.41  Aligned_cols=83  Identities=27%  Similarity=0.261  Sum_probs=69.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .+||..  +||||+|+||+++.++.++++|||.+....... ......++..|++||......++.++|+||+|++++++
T Consensus       109 ~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l  187 (277)
T cd05577         109 EHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEM  187 (277)
T ss_pred             HHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC-ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHH
Confidence            455555  999999999999999999999999887654321 12234567889999998887888999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       188 ~~g~~p  193 (277)
T cd05577         188 IAGRSP  193 (277)
T ss_pred             hhCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=4e-18  Score=134.18  Aligned_cols=78  Identities=18%  Similarity=0.170  Sum_probs=65.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CCCccccccccccccccccc-cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +|||+|+.|+|++.++..|++|||+++.....    ....+....|.+|.+||.+. ...++++.|+|.-||++.||.||
T Consensus       146 lHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtr  225 (376)
T KOG0669|consen  146 LHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTR  225 (376)
T ss_pred             HhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHcc
Confidence            99999999999999999999999999754432    22234556799999999876 56788999999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      .+-
T Consensus       226 spi  228 (376)
T KOG0669|consen  226 SPI  228 (376)
T ss_pred             Ccc
Confidence            865

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.71  E-value=1.6e-17  Score=136.28  Aligned_cols=78  Identities=21%  Similarity=0.203  Sum_probs=64.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||||+||++++++.+|++|||++....... .......++..|++||.+.. ...+.++||||+|++++|+++|+.|
T Consensus       138 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~  217 (302)
T cd07864         138 LHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPI  217 (302)
T ss_pred             ecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999988765432 22223345778999998754 3468899999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.71  E-value=1.2e-18  Score=148.82  Aligned_cols=83  Identities=24%  Similarity=0.358  Sum_probs=71.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCC---CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLE---YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~---~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||.+  +|+|+||+||||.+.   -.+|++|||+++.+.... ....+.||+.|+|||++....++..-|+||.||++
T Consensus       678 r~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi  756 (888)
T KOG4236|consen  678 RYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII  756 (888)
T ss_pred             HHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh-hhhhhcCCccccCHHHHhhccccccccceeeeEEE
Confidence            455544  999999999999643   457999999999988653 33457899999999999999999999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      |.-++|--|
T Consensus       757 YVsLSGTFP  765 (888)
T KOG4236|consen  757 YVSLSGTFP  765 (888)
T ss_pred             EEEeccccc
Confidence            999999999

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.71  E-value=2.5e-17  Score=147.99  Aligned_cols=78  Identities=22%  Similarity=0.268  Sum_probs=64.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCc-cccc--cccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNR-TELA--GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~-~~~~--g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +|||+...|||+..+..+|++|||+++......... ..-.  -...|||||.+....++.|+|||||||++||++| |.
T Consensus       440 vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~  519 (609)
T KOG0200|consen  440 VHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGG  519 (609)
T ss_pred             cchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCC
Confidence            999999999999999999999999999655432211 1111  2346999999999999999999999999999998 77


Q ss_pred             CC
Q 039937          167 HP  168 (208)
Q Consensus       167 ~p  168 (208)
                      .|
T Consensus       520 ~P  521 (609)
T KOG0200|consen  520 TP  521 (609)
T ss_pred             CC
Confidence            77

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.71  E-value=2.8e-17  Score=131.61  Aligned_cols=80  Identities=20%  Similarity=0.103  Sum_probs=65.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC-------cEEEcccceeeeecCCCCCccccccccccccccccccC--CcCcccchH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY-------EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL--KVAKKCGMH  153 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~-------~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~  153 (208)
                      .|||+.  +||||||+||+++.++       .+|++|||++......    ....++..|+|||++...  ..+.++|+|
T Consensus       115 ~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Di~  190 (259)
T cd05037         115 HYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR----EERVERIPWIAPECIRNGQASLTIAADKW  190 (259)
T ss_pred             HHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccc----cccccCCCccChhhhcCCCCCcchhhHHH
Confidence            566665  9999999999999887       7999999998765431    123456789999998765  778999999


Q ss_pred             HHHHHHHHHHcC-CCC
Q 039937          154 SSGLLALEVMKG-KHP  168 (208)
Q Consensus       154 S~Gvvl~elltg-~~p  168 (208)
                      |||++++|+++| ..|
T Consensus       191 slG~~~~~l~~~~~~p  206 (259)
T cd05037         191 SFGTTLLEICSNGEEP  206 (259)
T ss_pred             HHHHHHHHHHhCCCCC
Confidence            999999999995 655

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.70  E-value=1.6e-17  Score=135.03  Aligned_cols=83  Identities=20%  Similarity=0.271  Sum_probs=67.1

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      ++|+.  +|+||||+||+++.++.++++|||++....... .......++..|+|||.+... ..+.++||||+|++++|
T Consensus       114 ~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~  193 (286)
T cd07832         114 YMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAE  193 (286)
T ss_pred             HHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHH
Confidence            44444  999999999999999999999999988765432 122344678899999987644 45889999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       194 l~tg~~~  200 (286)
T cd07832         194 LLNGSPL  200 (286)
T ss_pred             HHcCCcC
Confidence            9999766

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.70  E-value=9.6e-18  Score=145.84  Aligned_cols=78  Identities=27%  Similarity=0.403  Sum_probs=65.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeec---------CCCCC---------------------------------ccc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFK---------LDSSN---------------------------------RTE  128 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~---------~~~~~---------------------------------~~~  128 (208)
                      |||||||.|||||.+|+.||.|||++.-+.         .+.+.                                 ...
T Consensus       751 IHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahs  830 (1034)
T KOG0608|consen  751 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHS  830 (1034)
T ss_pred             eecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhh
Confidence            999999999999999999999999975221         11000                                 012


Q ss_pred             cccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          129 LAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       129 ~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +.||+.|+|||++....++...|.||.||+|+||+.|+.|
T Consensus       831 lvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~p  870 (1034)
T KOG0608|consen  831 LVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPP  870 (1034)
T ss_pred             hcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCC
Confidence            3689999999999988889999999999999999999999

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.70  E-value=2.3e-17  Score=137.26  Aligned_cols=84  Identities=26%  Similarity=0.258  Sum_probs=70.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC---CCccccccccccccccccccC-CcCcccchHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvv  158 (208)
                      .+||..  +||||||.||+++.++.++++|||++.......   .......++..|+|||.+... ..+.++|+||+|++
T Consensus       117 ~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~i  196 (330)
T cd07834         117 KYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCI  196 (330)
T ss_pred             HHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHH
Confidence            455554  999999999999999999999999998766542   123344678889999998876 78899999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++++++|+.|
T Consensus       197 l~~l~~g~~p  206 (330)
T cd07834         197 FAELLTRKPL  206 (330)
T ss_pred             HHHHHcCCCC
Confidence            9999999988

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.70  E-value=2.4e-17  Score=134.08  Aligned_cols=80  Identities=21%  Similarity=0.122  Sum_probs=61.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC-------cEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY-------EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHS  154 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~-------~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S  154 (208)
                      +|+|+.  +||||||+||+++..+       .+|++|||++......    ....++..|+|||.+.. ..++.++||||
T Consensus       131 ~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s  206 (274)
T cd05076         131 SYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWS  206 (274)
T ss_pred             HHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHH
Confidence            345544  9999999999997543       3799999987654322    12346778999998864 55789999999


Q ss_pred             HHHHHHHHH-cCCCC
Q 039937          155 SGLLALEVM-KGKHP  168 (208)
Q Consensus       155 ~Gvvl~ell-tg~~p  168 (208)
                      ||+++||++ +|+.|
T Consensus       207 lG~~l~el~~~g~~p  221 (274)
T cd05076         207 FGTTLLEICFDGEVP  221 (274)
T ss_pred             HHHHHHHHHhCCCCC
Confidence            999999985 68888

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.70  E-value=4.7e-18  Score=147.49  Aligned_cols=78  Identities=15%  Similarity=0.231  Sum_probs=67.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC-ccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN-RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||...|||+...-.+|++|||+++.+...... .+...-.+.|||||.+...+++..+|||-|||.+||++. |.+|
T Consensus       513 VHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkP  592 (974)
T KOG4257|consen  513 VHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKP  592 (974)
T ss_pred             hhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCc
Confidence            99999999999999999999999999988765221 122233567999999999999999999999999999986 9999

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.70  E-value=4.9e-17  Score=130.24  Aligned_cols=84  Identities=25%  Similarity=0.308  Sum_probs=69.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--------CccccccccccccccccccCCcCcccchHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--------NRTELAGTYGYIALELTYTLKVAKKCGMHS  154 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S  154 (208)
                      .++|..  +|+||+|+||+++.++.++++|||++........        ......++..|++||.......+.++||||
T Consensus       107 ~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~s  186 (265)
T cd05579         107 EYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWS  186 (265)
T ss_pred             HHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHH
Confidence            566665  9999999999999999999999998875433211        223345778899999988777889999999


Q ss_pred             HHHHHHHHHcCCCC
Q 039937          155 SGLLALEVMKGKHP  168 (208)
Q Consensus       155 ~Gvvl~elltg~~p  168 (208)
                      ||++++|+++|+.|
T Consensus       187 lG~~~~~l~~g~~p  200 (265)
T cd05579         187 LGCILYEFLVGIPP  200 (265)
T ss_pred             HHHHHHHHHhCCCC
Confidence            99999999999999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.70  E-value=1.6e-17  Score=137.08  Aligned_cols=85  Identities=18%  Similarity=0.131  Sum_probs=68.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCC----CCcEEEcccceeeeecCCCC---CccccccccccccccccccC-CcCcccchH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDL----EYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTL-KVAKKCGMH  153 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~----~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~  153 (208)
                      ..+||..  +||||||+||+++.    ++.+|++|||++........   ......++..|+|||.+... .++.++|||
T Consensus       121 l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  200 (316)
T cd07842         121 VHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIW  200 (316)
T ss_pred             HHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHH
Confidence            3455555  99999999999999    99999999999887643311   22334678889999987653 578899999


Q ss_pred             HHHHHHHHHHcCCCC
Q 039937          154 SSGLLALEVMKGKHP  168 (208)
Q Consensus       154 S~Gvvl~elltg~~p  168 (208)
                      |||++++|+++|+.|
T Consensus       201 slG~~l~~l~~~~~~  215 (316)
T cd07842         201 AIGCIFAELLTLEPI  215 (316)
T ss_pred             HHHHHHHHHHhcCCC
Confidence            999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.70  E-value=3.6e-17  Score=132.55  Aligned_cols=84  Identities=20%  Similarity=0.213  Sum_probs=69.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||+|+||++++++.++++|||.+..............++..|+|||.+... ..+.++||||||++++|
T Consensus       112 ~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~  191 (282)
T cd07829         112 AYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAE  191 (282)
T ss_pred             HHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHH
Confidence            455554  999999999999999999999999988765443222334456789999988765 77899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       192 l~~~~~~  198 (282)
T cd07829         192 MITGKPL  198 (282)
T ss_pred             HHhCCCC
Confidence            9999887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.70  E-value=2.1e-17  Score=142.49  Aligned_cols=115  Identities=15%  Similarity=0.179  Sum_probs=85.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc--CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK--GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~  166 (208)
                      +|||+.+.|+|+|.++++||+|||+++.+-...  .......-...|||||.+..+++++++|||+||+++||+++  .+
T Consensus       659 VHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e  738 (807)
T KOG1094|consen  659 VHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCRE  738 (807)
T ss_pred             hhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhh
Confidence            999999999999999999999999998654331  12223344678999999999999999999999999999865  77


Q ss_pred             CC-----cccHHHHHHhhcCCCCCCcccc--CCCCCchHHHHhcccc
Q 039937          167 HP-----RHFIFSICSSSSNFVIAPHEIL--DPRFQPHHTMFGVNCY  206 (208)
Q Consensus       167 ~p-----~~~l~~~~~~~~~~~~~~~~~~--D~~l~~~~~~~~~~C~  206 (208)
                      +|     ....++-....+.... ..-++  .+.......++.+.|+
T Consensus       739 ~Py~~lt~e~vven~~~~~~~~~-~~~~l~~P~~cp~~lyelml~Cw  784 (807)
T KOG1094|consen  739 QPYSQLTDEQVVENAGEFFRDQG-RQVVLSRPPACPQGLYELMLRCW  784 (807)
T ss_pred             CchhhhhHHHHHHhhhhhcCCCC-cceeccCCCcCcHHHHHHHHHHh
Confidence            88     3445555555555543 22221  3333346778888885

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.70  E-value=3.2e-17  Score=132.97  Aligned_cols=84  Identities=20%  Similarity=0.169  Sum_probs=69.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +|+||+|+||+++.++.++++|||.+..............++..|++||.+... ..+.++|+||+|+++++
T Consensus       112 ~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~  191 (283)
T cd05118         112 AFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAE  191 (283)
T ss_pred             HHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHH
Confidence            345544  999999999999999999999999998776543222334567889999988766 67899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      ++||+.|
T Consensus       192 l~tg~~~  198 (283)
T cd05118         192 LLSRRPL  198 (283)
T ss_pred             HHhCCCC
Confidence            9999987

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.70  E-value=1.4e-17  Score=138.99  Aligned_cols=80  Identities=23%  Similarity=0.293  Sum_probs=65.7

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||..  +||||+|+||++++++.++++|||.+.......   ....++..|++||.+.. ..++.++|+||||++++|+
T Consensus       123 ~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el  199 (328)
T cd07856         123 YVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM---TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM  199 (328)
T ss_pred             HHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCc---CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHH
Confidence            44443  999999999999999999999999987543321   22356778999998765 5678999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       200 ~tg~~~  205 (328)
T cd07856         200 LEGKPL  205 (328)
T ss_pred             HhCCCC
Confidence            999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.69  E-value=2.8e-17  Score=133.34  Aligned_cols=82  Identities=17%  Similarity=0.082  Sum_probs=66.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||+|+||+++. +.+|++|||+++........ ....++..|+|||.+. ....+.++|+||+||+++|
T Consensus       114 ~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~e  191 (282)
T cd07831         114 DHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY-TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFE  191 (282)
T ss_pred             HHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCc-CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHH
Confidence            455555  99999999999999 99999999999876443221 2245678999999765 4556889999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       192 l~~~~~p  198 (282)
T cd07831         192 ILSLFPL  198 (282)
T ss_pred             HHcCCcC
Confidence            9999988

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.69  E-value=3.6e-17  Score=132.92  Aligned_cols=84  Identities=20%  Similarity=0.277  Sum_probs=70.4

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      ..+||..  +|+||+|+||+++.++.+|++|||.+........ .....++..|++||.+.....+.++|+||||++++|
T Consensus       120 l~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~  198 (287)
T cd07838         120 VDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAE  198 (287)
T ss_pred             HHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHH
Confidence            3456655  9999999999999999999999999887654322 123346788999999988888999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       199 l~~~~~~  205 (287)
T cd07838         199 LFRRRPL  205 (287)
T ss_pred             HHhCCCc
Confidence            9999887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.69  E-value=3.4e-17  Score=132.89  Aligned_cols=84  Identities=21%  Similarity=0.243  Sum_probs=68.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCcccccccccccccccccc-CCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+||..  +|+||+|+||++++++.+|++|||++....... .......++..|+|||.+.. ...+.++||||||++++
T Consensus       114 ~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~  193 (287)
T cd07840         114 QYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILA  193 (287)
T ss_pred             HHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHH
Confidence            455555  999999999999999999999999988765432 12233456788999997653 45688999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      |+++|+.|
T Consensus       194 el~t~~~p  201 (287)
T cd07840         194 ELFLGKPI  201 (287)
T ss_pred             HHHhCCCC
Confidence            99999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.68  E-value=1.1e-16  Score=129.97  Aligned_cols=83  Identities=16%  Similarity=0.160  Sum_probs=67.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||+.  +|+||+|.||++++++.++++|||++........ .....++..|+|||.+. ....+.++|+||||++++|
T Consensus       113 ~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~e  191 (283)
T cd07830         113 AHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAE  191 (283)
T ss_pred             HHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHH
Confidence            344444  9999999999999999999999999987654322 12345778899999875 4457899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       192 l~~g~~~  198 (283)
T cd07830         192 LYTLRPL  198 (283)
T ss_pred             HHhCCCc
Confidence            9999877

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.68  E-value=2.4e-17  Score=147.25  Aligned_cols=85  Identities=24%  Similarity=0.320  Sum_probs=72.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-----CCcCcccchHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-----LKVAKKCGMHSSGLL  158 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~S~Gvv  158 (208)
                      +||.+  ||||||-.||||+.++.+|+.|||++......-....+..||+.|||||++..     ..++..+|+||+|++
T Consensus       138 HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGIT  217 (953)
T KOG0587|consen  138 HLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGIT  217 (953)
T ss_pred             HHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccce
Confidence            44444  99999999999999999999999999988765445567789999999998863     346789999999999


Q ss_pred             HHHHHcCCCCcc
Q 039937          159 ALEVMKGKHPRH  170 (208)
Q Consensus       159 l~elltg~~p~~  170 (208)
                      ..||--|.+|..
T Consensus       218 aIEladG~PPl~  229 (953)
T KOG0587|consen  218 AIEMAEGAPPLC  229 (953)
T ss_pred             eehhcCCCCCcc
Confidence            999999999933

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.67  E-value=4.4e-17  Score=136.78  Aligned_cols=75  Identities=23%  Similarity=0.276  Sum_probs=64.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.++++|||++.......   ....++..|++||.+.. ...+.++|+||+|++++++++|+.|
T Consensus       140 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~p  215 (343)
T cd07880         140 IHRDLKPGNLAVNEDCELKILDFGLARQTDSEM---TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPL  215 (343)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeecccccccccCc---cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987654321   23356788999998765 4578899999999999999999998

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.67  E-value=3.2e-16  Score=124.88  Aligned_cols=84  Identities=30%  Similarity=0.374  Sum_probs=70.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .++|..  +|+||+|+||+++.++.++++|||++..............++..|++||.......+.++|+||||++++|+
T Consensus       107 ~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l  186 (250)
T cd05123         107 EYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEM  186 (250)
T ss_pred             HHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHH
Confidence            345544  999999999999999999999999988765432233445678899999998877788999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       187 ~~g~~p  192 (250)
T cd05123         187 LTGKPP  192 (250)
T ss_pred             HHCCCC
Confidence            999999

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.67  E-value=6.1e-17  Score=134.92  Aligned_cols=85  Identities=11%  Similarity=0.075  Sum_probs=65.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-------Ccccccccccccccccccc--CCcCcccchH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYT--LKVAKKCGMH  153 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~  153 (208)
                      +|||..  +||||||+||+++.++.++++||+..........       ......++..|+|||++..  ..++.++|||
T Consensus       115 ~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diw  194 (327)
T cd08227         115 DYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY  194 (327)
T ss_pred             HHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHH
Confidence            455655  9999999999999999999999976543321100       1112245677999999875  3578999999


Q ss_pred             HHHHHHHHHHcCCCCc
Q 039937          154 SSGLLALEVMKGKHPR  169 (208)
Q Consensus       154 S~Gvvl~elltg~~p~  169 (208)
                      ||||+++|+++|+.|.
T Consensus       195 slG~il~el~~g~~pf  210 (327)
T cd08227         195 SVGITACELANGHVPF  210 (327)
T ss_pred             HHHHHHHHHHHCCCCC
Confidence            9999999999999993

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.67  E-value=5.2e-17  Score=136.33  Aligned_cols=75  Identities=23%  Similarity=0.304  Sum_probs=64.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.++++|||++......   .....++..|+|||.... ...+.++||||+|++++|+++|+.|
T Consensus       140 ~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~p  215 (343)
T cd07851         140 IHRDLKPSNIAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTL  215 (343)
T ss_pred             ecCCCCHHHeEECCCCCEEEcccccccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998765432   223356788999998764 3568899999999999999999988

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.67  E-value=8.2e-17  Score=135.05  Aligned_cols=78  Identities=19%  Similarity=0.203  Sum_probs=62.4

Q ss_pred             hhcCcCCCceeeC-CCCcEEEcccceeeeecCC---CCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+||+++ ++..+|++|||.+......   ........++..|+|||.+.. ..++.++|+||+||+++|+++|
T Consensus       136 vH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g  215 (342)
T cd07854         136 LHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG  215 (342)
T ss_pred             ccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhC
Confidence            9999999999997 4567899999998765432   111122356788999997653 4577899999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       216 ~~p  218 (342)
T cd07854         216 KPL  218 (342)
T ss_pred             CCC
Confidence            988

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=5.3e-17  Score=138.54  Aligned_cols=77  Identities=18%  Similarity=0.244  Sum_probs=66.9

Q ss_pred             hhcCcCCCceee-CCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcC-cccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLL-DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVA-KKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nill-d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||.+ ..-|-+|+.|||++-.+.++. ..++.+|+..|.|||.+.+..++ +..||||+||+||.|+.|+.|
T Consensus       140 VHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~-kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~P  218 (864)
T KOG4717|consen  140 VHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK-KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPP  218 (864)
T ss_pred             hcccCCcceeEEeeecCceEeeeccccccCCCcc-hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCc
Confidence            999999999866 556889999999988776553 34567899999999999887776 788999999999999999999

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.66  E-value=1.3e-16  Score=139.83  Aligned_cols=77  Identities=14%  Similarity=0.073  Sum_probs=58.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCc----------------------C
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKV----------------------A  147 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~----------------------~  147 (208)
                      +||||||+||+++.++.+|++|||++........ ......+++.|++||.+.....                      .
T Consensus       331 vHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~  410 (507)
T PLN03224        331 VHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRP  410 (507)
T ss_pred             ecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCC
Confidence            8999999999999999999999999876543311 1111234789999998753221                      1


Q ss_pred             cccchHHHHHHHHHHHcCCC
Q 039937          148 KKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus       148 ~~~Dv~S~Gvvl~elltg~~  167 (208)
                      .+.||||+||+++||++|..
T Consensus       411 ~~~DvwSlGvil~em~~~~l  430 (507)
T PLN03224        411 DLFDSYTAGVLLMQMCVPEL  430 (507)
T ss_pred             CccchhhHHHHHHHHHhCCC
Confidence            34699999999999999876

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.66  E-value=1.2e-16  Score=133.47  Aligned_cols=78  Identities=24%  Similarity=0.220  Sum_probs=63.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--------------CCCccccccccccccccccccC-CcCcccchHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--------------SSNRTELAGTYGYIALELTYTL-KVAKKCGMHSS  155 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~  155 (208)
                      +|+||+|+||+++.++.++++|||++......              ........++..|+|||.+... ..+.++|+||+
T Consensus       141 ~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl  220 (335)
T PTZ00024        141 MHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSV  220 (335)
T ss_pred             ecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHH
Confidence            99999999999999999999999998866511              1111223457789999988653 46889999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      |++++|+++|+.|
T Consensus       221 G~~l~el~tg~~p  233 (335)
T PTZ00024        221 GCIFAELLTGKPL  233 (335)
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999999988

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.65  E-value=1.5e-16  Score=132.41  Aligned_cols=86  Identities=16%  Similarity=0.182  Sum_probs=69.1

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC----------------------------------C---
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----------------------------------S---  123 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----------------------------------~---  123 (208)
                      ..+|||..  |+|||||+|||+-++|++.|+||.++......                                  .   
T Consensus       191 ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~  270 (459)
T KOG0610|consen  191 ALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRK  270 (459)
T ss_pred             HHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccc
Confidence            45677765  99999999999999999999999986432100                                  0   


Q ss_pred             -------------------CCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          124 -------------------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       124 -------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                                         ....-+.||-.|+|||.+.+...+...|.|+|||++|||+.|..|
T Consensus       271 k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TP  334 (459)
T KOG0610|consen  271 KKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTP  334 (459)
T ss_pred             cccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                               000123577789999999988889999999999999999999999

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.65  E-value=3.8e-16  Score=118.62  Aligned_cols=71  Identities=18%  Similarity=0.120  Sum_probs=62.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|..-||+||+++.++.+|+  ||.++......     ..|++.|+|||.+....++.++|||||||++||++||+.|
T Consensus        33 lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  103 (176)
T smart00750       33 LHRQAKSGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELP  103 (176)
T ss_pred             HHhcCCcccEeEcCccceee--ccceEeecccc-----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCC
Confidence            45555999999999999999  99988765432     2578999999999988999999999999999999999999

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.65  E-value=6.6e-17  Score=139.85  Aligned_cols=77  Identities=25%  Similarity=0.364  Sum_probs=68.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|||||++||+||.++..||+|||++.++... ......+|++.|.|||.+.+.++ .+..|+||+|+++|.|+.|..|
T Consensus       177 vHrdLk~eNilL~~~mnikIaDfgfS~~~~~~-~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLP  254 (596)
T KOG0586|consen  177 VHRDLKAENILLDENMNIKIADFGFSTFFDYG-LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLP  254 (596)
T ss_pred             eccccchhhcccccccceeeeccccceeeccc-ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccc
Confidence            99999999999999999999999999888743 33456789999999999887665 4899999999999999999999

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.64  E-value=3.2e-16  Score=140.12  Aligned_cols=78  Identities=24%  Similarity=0.211  Sum_probs=62.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-C--C------ccccccccccccccccc---cCCcCcccchHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-S--N------RTELAGTYGYIALELTY---TLKVAKKCGMHSSGLL  158 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~--~------~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvv  158 (208)
                      ||||||-+||||..++..||||||-+....... .  .      .....-|+.|.+||.+.   +..+++|+|||++||+
T Consensus       168 IHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGcl  247 (738)
T KOG1989|consen  168 IHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCL  247 (738)
T ss_pred             chhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHH
Confidence            999999999999999999999999875432211 0  0      01123478899999763   6678999999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ||-|.....|
T Consensus       248 LYkLCy~t~P  257 (738)
T KOG1989|consen  248 LYKLCYFTTP  257 (738)
T ss_pred             HHHHHHhCCC
Confidence            9999988888

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.63  E-value=3.2e-16  Score=129.89  Aligned_cols=84  Identities=18%  Similarity=0.224  Sum_probs=67.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +|||.+  ||.||...|.++|+...+|++|-.+++-.-+..-  .-...-....||+||.+....++..+|||||||++|
T Consensus       410 ~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllW  489 (563)
T KOG1024|consen  410 EHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLW  489 (563)
T ss_pred             HHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHH
Confidence            344444  9999999999999999999999998886544311  001112346799999999999999999999999999


Q ss_pred             HHHc-CCCC
Q 039937          161 EVMK-GKHP  168 (208)
Q Consensus       161 ellt-g~~p  168 (208)
                      ||+| |+.|
T Consensus       490 ELmtlg~~P  498 (563)
T KOG1024|consen  490 ELMTLGKLP  498 (563)
T ss_pred             HHHhcCCCC
Confidence            9998 9999

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.63  E-value=2.5e-16  Score=126.57  Aligned_cols=83  Identities=24%  Similarity=0.216  Sum_probs=70.4

Q ss_pred             HHhhhh--hhcCcCCCceeeC---CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLD---LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld---~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||..  .||||||+|+|..   .+...||+|||+++..... ....+.+-|+.|.|||++...+++...|+||+||++
T Consensus       175 ~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~-~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVim  253 (400)
T KOG0604|consen  175 RYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP-GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIM  253 (400)
T ss_pred             HHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC-ccccCCcccccccCHHHhCchhcCCCCCccchhHHH
Confidence            455544  9999999999996   4567899999999986643 233456779999999999988999999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      |-|+.|.+|
T Consensus       254 YIlLCGyPP  262 (400)
T KOG0604|consen  254 YILLCGYPP  262 (400)
T ss_pred             HHhhcCCCc
Confidence            999999999

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.60  E-value=9.1e-17  Score=132.38  Aligned_cols=75  Identities=23%  Similarity=0.294  Sum_probs=63.8

Q ss_pred             hhcCcCCCceeeCC--------------------CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCccc
Q 039937           91 ISFTTSSKNGLLDL--------------------EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKC  150 (208)
Q Consensus        91 iH~dlk~~nilld~--------------------~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~  150 (208)
                      +|-||||+|||+-+                    +..+++.|||-+.......   ..+..|..|.|||.+.+-.++.++
T Consensus       214 ~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLgLGwS~pC  290 (415)
T KOG0671|consen  214 THTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILGLGWSQPC  290 (415)
T ss_pred             eecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheeccCcCCcc
Confidence            99999999999921                    2457899999988765543   345678999999999999999999


Q ss_pred             chHHHHHHHHHHHcCCCC
Q 039937          151 GMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       151 Dv~S~Gvvl~elltg~~p  168 (208)
                      ||||+||+|.|+.||..-
T Consensus       291 DvWSiGCIL~ElytG~~L  308 (415)
T KOG0671|consen  291 DVWSIGCILVELYTGETL  308 (415)
T ss_pred             CceeeeeEEEEeecccee
Confidence            999999999999999874

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.60  E-value=1.1e-15  Score=121.72  Aligned_cols=82  Identities=21%  Similarity=0.122  Sum_probs=67.9

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+++|+.  +||||||+||+++.++.++++|||.+......   .....++..|++||.......+.++|+||+|++++|
T Consensus        98 l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~e  174 (237)
T cd05576          98 LDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFE  174 (237)
T ss_pred             HHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHH
Confidence            3566665  99999999999999999999999987655432   122345677999999887788899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       175 l~~g~~~  181 (237)
T cd05576         175 LLTGKTL  181 (237)
T ss_pred             HHHCcch
Confidence            9999976

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.59  E-value=7.9e-16  Score=142.38  Aligned_cols=86  Identities=8%  Similarity=0.031  Sum_probs=65.8

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCC-------------------CCcEEEcccceeeeecCCC----------------CC
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDL-------------------EYEARAFDFGIAKFFKLDS----------------SN  125 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~-------------------~~~~kl~dfgl~~~~~~~~----------------~~  125 (208)
                      ..+|+|.+  +||||||+|||++.                   ++.+|++|||+++......                ..
T Consensus        92 al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~  171 (793)
T PLN00181         92 IVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMK  171 (793)
T ss_pred             HHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccc
Confidence            45678877  99999999999954                   4556777777765422100                00


Q ss_pred             ccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          126 RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       126 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      .....||+.|||||++....++.++|||||||+++||++|..|
T Consensus       172 ~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~  214 (793)
T PLN00181        172 QILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSS  214 (793)
T ss_pred             ccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCc
Confidence            0113578889999999888899999999999999999999888

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.59  E-value=4.1e-16  Score=134.45  Aligned_cols=76  Identities=22%  Similarity=0.271  Sum_probs=66.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|||||-+|+.+|.+|.+|+.|||.+.....+  ....+.||..|.|||.+.+.++ ....|+|++|+++|.++....|
T Consensus       692 vhrdikdenvivd~~g~~klidfgsaa~~ksg--pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp  768 (772)
T KOG1152|consen  692 VHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG--PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP  768 (772)
T ss_pred             eecccccccEEEecCCeEEEeeccchhhhcCC--CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence            99999999999999999999999988776543  3345789999999999987765 5778999999999999888777

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.58  E-value=1.4e-15  Score=126.84  Aligned_cols=85  Identities=15%  Similarity=0.110  Sum_probs=63.9

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC-------cccccccccccccccccc--CCcCcccch
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN-------RTELAGTYGYIALELTYT--LKVAKKCGM  152 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv  152 (208)
                      .+|+|..  +||||||+||+++.++.++++||+...........       .....++..|++||++..  ..++.++||
T Consensus       114 L~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di  193 (328)
T cd08226         114 LNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDI  193 (328)
T ss_pred             HHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhH
Confidence            3566665  99999999999999999999999754322211000       011234567999999865  346789999


Q ss_pred             HHHHHHHHHHHcCCCC
Q 039937          153 HSSGLLALEVMKGKHP  168 (208)
Q Consensus       153 ~S~Gvvl~elltg~~p  168 (208)
                      ||+|++++|+++|+.|
T Consensus       194 wslG~~l~el~~g~~p  209 (328)
T cd08226         194 YSVGITACELATGRVP  209 (328)
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.57  E-value=6.3e-16  Score=135.02  Aligned_cols=85  Identities=24%  Similarity=0.296  Sum_probs=71.7

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLL  158 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvv  158 (208)
                      ..|||+.  +|||||-.||++++.+.+|++|||.+..+..-......+.||+.|||||+..   .+.+..++|+|+.|+.
T Consensus       125 l~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~git  204 (829)
T KOG0576|consen  125 LKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGIT  204 (829)
T ss_pred             chhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccc
Confidence            3455554  9999999999999999999999999887765544445678999999999864   5678899999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ..|+-.-+.|
T Consensus       205 Aiel~eLqpp  214 (829)
T KOG0576|consen  205 AIELGELQPP  214 (829)
T ss_pred             hhhhhhcCCc
Confidence            9998877777

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.55  E-value=3.8e-15  Score=120.57  Aligned_cols=95  Identities=20%  Similarity=0.160  Sum_probs=78.2

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|+|..  +||||||+||++..+..+||.|||+++..... -..+....+..|.|||.+.+..+.+..||||.||++.|
T Consensus       131 ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gE  209 (369)
T KOG0665|consen  131 IKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  209 (369)
T ss_pred             HHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHH
Confidence            3455555  99999999999999999999999999876544 23344567889999999988889999999999999999


Q ss_pred             HHcCCCC---cccHHHHHHhh
Q 039937          162 VMKGKHP---RHFIFSICSSS  179 (208)
Q Consensus       162 lltg~~p---~~~l~~~~~~~  179 (208)
                      |++|+--   ...+.+|.+..
T Consensus       210 li~~~Vlf~g~d~idQ~~ki~  230 (369)
T KOG0665|consen  210 LILGTVLFPGKDHIDQWNKII  230 (369)
T ss_pred             HhhceEEecCchHHHHHHHHH
Confidence            9999853   55688886543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.54  E-value=8.8e-15  Score=118.77  Aligned_cols=85  Identities=19%  Similarity=0.287  Sum_probs=65.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCC---cEEEcccceeeeecCC-------CCCccccccccccccccccc-----cCCc
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEY---EARAFDFGIAKFFKLD-------SSNRTELAGTYGYIALELTY-----TLKV  146 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~---~~kl~dfgl~~~~~~~-------~~~~~~~~g~~~y~aPE~~~-----~~~~  146 (208)
                      .++||.+  .|||+||+|||-....   .+||+||.+...+...       +....+..|+..|||||+..     ...+
T Consensus       189 LdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~Y  268 (463)
T KOG0607|consen  189 LDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFY  268 (463)
T ss_pred             HHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccc
Confidence            3455544  9999999999997554   3699999887543321       22334567889999999753     3467


Q ss_pred             CcccchHHHHHHHHHHHcCCCC
Q 039937          147 AKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       147 ~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +.+.|.||+||++|-|+.|..|
T Consensus       269 DKrCDlwSLGvIlYImLsGYpP  290 (463)
T KOG0607|consen  269 DKRCDLWSLGVILYIMLSGYPP  290 (463)
T ss_pred             cccccHHHHHHHHHHHHhCCCC
Confidence            8999999999999999999999

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.53  E-value=2.7e-15  Score=116.85  Aligned_cols=77  Identities=18%  Similarity=0.216  Sum_probs=64.6

Q ss_pred             hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccc-cCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|||+||.|+++|. .-..++.|+|++.+..+.... .....+..|--||.+. ...++..-|+|||||++..|+..+.|
T Consensus       154 mHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY-nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkep  232 (338)
T KOG0668|consen  154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP  232 (338)
T ss_pred             ccccCCcceeeechhhceeeeeecchHhhcCCCcee-eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCc
Confidence            99999999999996 466899999999998876433 2334567788899887 45578889999999999999999999

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.53  E-value=1.2e-15  Score=136.01  Aligned_cols=78  Identities=24%  Similarity=0.311  Sum_probs=67.1

Q ss_pred             hhcCcCCCceeeCC-----CCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDL-----EYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        91 iH~dlk~~nilld~-----~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||||||.|||++.     ..+++|+|||+++.+..+..   ...+..||-||+|||.+....-+...|++|+||++|+.
T Consensus       628 VHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYv  707 (903)
T KOG1027|consen  628 VHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYV  707 (903)
T ss_pred             ccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEE
Confidence            99999999999975     36789999999998876622   23456899999999999887778899999999999999


Q ss_pred             HcC-CCC
Q 039937          163 MKG-KHP  168 (208)
Q Consensus       163 ltg-~~p  168 (208)
                      ++| .+|
T Consensus       708 ltgG~Hp  714 (903)
T KOG1027|consen  708 LTGGSHP  714 (903)
T ss_pred             ecCCccC
Confidence            985 888

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.52  E-value=1.6e-15  Score=120.64  Aligned_cols=85  Identities=21%  Similarity=0.260  Sum_probs=62.8

Q ss_pred             hHHHhhhh--hhcCcCCCceeeC--CCCcEEEcccceeeeecCCCCCcccccccccccccccccc-----CCcCcccchH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLD--LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-----LKVAKKCGMH  153 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld--~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~  153 (208)
                      ..+|+|++  +|||||.+|||+-  +..++|++|||+......-   .....-+..|-+||....     -++.+.+|+|
T Consensus       133 Ai~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~W  209 (378)
T KOG1345|consen  133 AIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIW  209 (378)
T ss_pred             HHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce---ehhhhhhcccCCcHHHhhccccceEecccccch
Confidence            34566666  9999999999983  4568999999987654321   112233456888886542     2456889999


Q ss_pred             HHHHHHHHHHcCCCCcc
Q 039937          154 SSGLLALEVMKGKHPRH  170 (208)
Q Consensus       154 S~Gvvl~elltg~~p~~  170 (208)
                      .||++++..+||+.||+
T Consensus       210 qfGIi~f~cltG~~PWQ  226 (378)
T KOG1345|consen  210 QFGIIFFYCLTGKFPWQ  226 (378)
T ss_pred             heeeeeeeeecCCCcch
Confidence            99999999999999943

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.51  E-value=2.3e-14  Score=118.30  Aligned_cols=86  Identities=13%  Similarity=0.096  Sum_probs=69.1

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-------Ccccccccccccccccccc--CCcCcccc
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYT--LKVAKKCG  151 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~--~~~~~~~D  151 (208)
                      ..+|||..  +||||||+||+++.++.+|++||+.+........       ......++..|+|||.+..  ..++.++|
T Consensus       113 ~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~D  192 (314)
T cd08216         113 ALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSD  192 (314)
T ss_pred             HHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchh
Confidence            34678877  9999999999999999999999998875532211       1123346778999998864  34778999


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      +||||++++|+++|+.|
T Consensus       193 iws~G~il~el~~g~~p  209 (314)
T cd08216         193 IYSVGITACELANGHVP  209 (314)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.51  E-value=3.8e-14  Score=110.61  Aligned_cols=85  Identities=24%  Similarity=0.300  Sum_probs=69.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCcccccccccccccccc-ccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELT-YTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .++|..  +|+|+++.||+++.++.++++|||.+....... .......++..|++||.. .....+.++|+|+||++++
T Consensus       112 ~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~  191 (225)
T smart00221      112 EYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILY  191 (225)
T ss_pred             HHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHH
Confidence            344444  999999999999999999999999988775442 122334567789999988 5666778999999999999


Q ss_pred             HHHcCCCCc
Q 039937          161 EVMKGKHPR  169 (208)
Q Consensus       161 elltg~~p~  169 (208)
                      |+++|+.|.
T Consensus       192 ~l~~g~~pf  200 (225)
T smart00221      192 ELLWGPEPF  200 (225)
T ss_pred             HHHHCCCCc
Confidence            999999993

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.50  E-value=9.8e-14  Score=109.09  Aligned_cols=123  Identities=20%  Similarity=0.226  Sum_probs=87.6

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ...++|..  +|+||+|.||+++.++.++++|||.+....... ......++..|++||.......+.++|+||+|++++
T Consensus        99 ~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~  177 (244)
T smart00220       99 ALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILY  177 (244)
T ss_pred             HHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHH
Confidence            34456655  999999999999999999999999998766432 223345778899999988788889999999999999


Q ss_pred             HHHcCCCCc---ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHPR---HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p~---~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++++|..|.   .....+......... ........+..++.++..+|++
T Consensus       178 ~l~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~  226 (244)
T smart00220      178 ELLTGKPPFPGDDQLLELFKKIGKPKP-PFPPPEWKISPEAKDLIRKLLV  226 (244)
T ss_pred             HHHhCCCCCCCCCcHHHHHHHHhccCC-CCccccccCCHHHHHHHHHHcc
Confidence            999999882   233333333222211 1111111155677778888765

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.47  E-value=1.8e-14  Score=119.99  Aligned_cols=78  Identities=22%  Similarity=0.359  Sum_probs=60.9

Q ss_pred             hhcCcCCCceeeCC-CCcEEEcccceeeeec-----------------C-C----------C----C------------C
Q 039937           91 ISFTTSSKNGLLDL-EYEARAFDFGIAKFFK-----------------L-D----------S----S------------N  125 (208)
Q Consensus        91 iH~dlk~~nilld~-~~~~kl~dfgl~~~~~-----------------~-~----------~----~------------~  125 (208)
                      |||||||+|+|.+. .+...|.|||++....                 + .          .    .            .
T Consensus       154 vHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~  233 (418)
T KOG1167|consen  154 VHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSE  233 (418)
T ss_pred             cccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccce
Confidence            99999999999985 4677899999986110                 0 0          0    0            0


Q ss_pred             ccccccccccccccccc-cCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          126 RTELAGTYGYIALELTY-TLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       126 ~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      .-...||+||.|||++. ....+++.||||.||+++-+++++.|
T Consensus       234 ~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~P  277 (418)
T KOG1167|consen  234 RANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYP  277 (418)
T ss_pred             ecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccc
Confidence            01235899999999886 45668999999999999999999999

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.45  E-value=9.1e-15  Score=125.00  Aligned_cols=75  Identities=23%  Similarity=0.177  Sum_probs=64.2

Q ss_pred             hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +|.||||.|||+.+ ...+||||||-+......  ..+....+..|.|||.+.+..++...|+||.||.|||+.||+-
T Consensus       558 lHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en--eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkI  633 (752)
T KOG0670|consen  558 LHADIKPDNILVNESKNILKLCDFGSASFASEN--EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKI  633 (752)
T ss_pred             eecccCccceEeccCcceeeeccCccccccccc--cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccce
Confidence            99999999999986 467899999998876644  2223345678999999999999999999999999999999985

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.33  E-value=1.8e-12  Score=118.63  Aligned_cols=110  Identities=21%  Similarity=0.262  Sum_probs=93.1

Q ss_pred             hcCCCCCceeccCCCceEEehhhh-------------------------------------------------hHHHhhh
Q 039937           59 TNNFDDEHCIGKDGQGVVTKLRYH-------------------------------------------------LEKLLRQ   89 (208)
Q Consensus        59 ~~~f~~~~~lg~G~~g~Vy~~~~~-------------------------------------------------L~~~Lh~   89 (208)
                      .++|+..+.|..|+||.||..+++                                                 -.+|+|.
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~lilRnilt~a~npfvvgDc~tllk~~g~lPvdmvla~Eylh~  161 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLILRNILTFAGNPFVVGDCATLLKNIGPLPVDMVLAVEYLHS  161 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcccccchhhhccccccCCcceechhhhhcccCCCCcchhhHHhHhhcc
Confidence            467999999999999999998666                                                 3467776


Q ss_pred             h--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--C-------------CCccccccccccccccccccCCcCcccch
Q 039937           90 E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--S-------------SNRTELAGTYGYIALELTYTLKVAKKCGM  152 (208)
Q Consensus        90 ~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~-------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv  152 (208)
                      .  +|||+||.|.+++.-++.|+.|||+.+.....  +             -....++||+.|+|||++....|....|+
T Consensus       162 ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdw  241 (1205)
T KOG0606|consen  162 YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDW  241 (1205)
T ss_pred             CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccH
Confidence            5  99999999999999999999999998753221  0             01235689999999999998888999999


Q ss_pred             HHHHHHHHHHHcCCCC
Q 039937          153 HSSGLLALEVMKGKHP  168 (208)
Q Consensus       153 ~S~Gvvl~elltg~~p  168 (208)
                      |+.|+++||.+.|..|
T Consensus       242 wamGiIlyeFLVgcvp  257 (1205)
T KOG0606|consen  242 WAMGIILYEFLVGCVP  257 (1205)
T ss_pred             HHHHHHHHHHheeeee
Confidence            9999999999999999

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.32  E-value=1.6e-12  Score=106.18  Aligned_cols=89  Identities=17%  Similarity=0.292  Sum_probs=71.4

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCC-----CcEEEcccceeeeecCCCC-------CccccccccccccccccccCCcCcc
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLE-----YEARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYTLKVAKK  149 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~-----~~~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~  149 (208)
                      -+++|.+  |.|||||+|+|+...     ..+.+.|||+++.+.+...       ....+.||..||+.....+...+.+
T Consensus       137 ie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRR  216 (449)
T KOG1165|consen  137 IEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRR  216 (449)
T ss_pred             HHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhh
Confidence            3455554  999999999999744     4578999999998865411       1234579999999988888888999


Q ss_pred             cchHHHHHHHHHHHcCCCCcccH
Q 039937          150 CGMHSSGLLALEVMKGKHPRHFI  172 (208)
Q Consensus       150 ~Dv~S~Gvvl~elltg~~p~~~l  172 (208)
                      .|+-|+|-++.+.+.|..||+.|
T Consensus       217 DDLEaLGHvFmYFLRGsLPWQGL  239 (449)
T KOG1165|consen  217 DDLEALGHVFMYFLRGSLPWQGL  239 (449)
T ss_pred             hhHHHhhhhhhhhccCCCccccc
Confidence            99999999999999999995543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.28  E-value=4.7e-12  Score=105.73  Aligned_cols=81  Identities=19%  Similarity=0.292  Sum_probs=65.6

Q ss_pred             hhcCcCCCceeeCCC-----CcEEEcccceee--eecC-CCC------C-ccccccccccccccccccCCcCcccchHHH
Q 039937           91 ISFTTSSKNGLLDLE-----YEARAFDFGIAK--FFKL-DSS------N-RTELAGTYGYIALELTYTLKVAKKCGMHSS  155 (208)
Q Consensus        91 iH~dlk~~nilld~~-----~~~kl~dfgl~~--~~~~-~~~------~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~  155 (208)
                      +||||||.|+++...     ..+.+.|||+++  .... ...      . .....||..|+++........+.+.|+||+
T Consensus       144 iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~  223 (322)
T KOG1164|consen  144 IHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESL  223 (322)
T ss_pred             ccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhH
Confidence            999999999999865     468999999998  3211 110      1 123459999999998888889999999999


Q ss_pred             HHHHHHHHcCCCCccc
Q 039937          156 GLLALEVMKGKHPRHF  171 (208)
Q Consensus       156 Gvvl~elltg~~p~~~  171 (208)
                      +.++.|++.|..||..
T Consensus       224 ~Y~l~el~~g~LPW~~  239 (322)
T KOG1164|consen  224 FYMLLELLKGSLPWEA  239 (322)
T ss_pred             HHHHHHHhcCCCCCcc
Confidence            9999999999999543

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.28  E-value=8.8e-13  Score=103.60  Aligned_cols=89  Identities=20%  Similarity=0.288  Sum_probs=69.0

Q ss_pred             Hhhhh--hhcCcCCCceeeCC---CCcEEEcccceeeeecCCC-------CCccccccccccccccccccCCcCcccchH
Q 039937           86 LLRQE--ISFTTSSKNGLLDL---EYEARAFDFGIAKFFKLDS-------SNRTELAGTYGYIALELTYTLKVAKKCGMH  153 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~---~~~~kl~dfgl~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~  153 (208)
                      |+|.+  |||||||.|+|..-   ...+.+.|||+++.+.+..       .......||..|.+-....+...+.+.|+-
T Consensus       126 yvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDme  205 (341)
T KOG1163|consen  126 YVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDME  205 (341)
T ss_pred             HHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhh
Confidence            44444  99999999999964   3567899999999765431       122356789999888766666678899999


Q ss_pred             HHHHHHHHHHcCCCCcccHHH
Q 039937          154 SSGLLALEVMKGKHPRHFIFS  174 (208)
Q Consensus       154 S~Gvvl~elltg~~p~~~l~~  174 (208)
                      |+|.++.+...|..||+.+..
T Consensus       206 SvgYvLmYfnrG~LPWQglka  226 (341)
T KOG1163|consen  206 SVGYVLMYFNRGSLPWQGLKA  226 (341)
T ss_pred             hhcceeeeeecCCCcccccch
Confidence            999999999999999776543

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.18  E-value=6.2e-12  Score=114.54  Aligned_cols=74  Identities=19%  Similarity=0.130  Sum_probs=55.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvv  158 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.............+++.|++||..... .-...+++|++|.-
T Consensus       118 ~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~  194 (669)
T cd05610         118 DYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFN  194 (669)
T ss_pred             HHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCcccccccccCccccCccccccCCCCceeeeeeecCcC
Confidence            344444  999999999999999999999999998765543334456788999999865432 23456677887753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.16  E-value=2.6e-11  Score=102.55  Aligned_cols=52  Identities=19%  Similarity=0.160  Sum_probs=42.3

Q ss_pred             hhcCc-CCCceeeCCCCcEEEcccceeeeecCCC--------CCccccccccccccccccc
Q 039937           91 ISFTT-SSKNGLLDLEYEARAFDFGIAKFFKLDS--------SNRTELAGTYGYIALELTY  142 (208)
Q Consensus        91 iH~dl-k~~nilld~~~~~kl~dfgl~~~~~~~~--------~~~~~~~g~~~y~aPE~~~  142 (208)
                      +|||| ||+|||++.++.+||+|||+++......        ...+...+++.|++||.+.
T Consensus       133 iHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        133 THNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             eeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            99999 9999999999999999999999765442        1123556788899999875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.14  E-value=1.5e-11  Score=107.46  Aligned_cols=79  Identities=29%  Similarity=0.294  Sum_probs=66.0

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+++|..  +|||+|++||+++.+|++++.|||+++..-...    ..+||.-|||||...  ......|.||||++.+|
T Consensus       110 ld~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----~~cgt~eymApEI~~--gh~~a~D~ws~gvl~fe  183 (612)
T KOG0603|consen  110 LDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFE  183 (612)
T ss_pred             HhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh----hcccchhhhhhHhhh--ccCCcccchhhhhhHHH
Confidence            3444444  999999999999999999999999998765432    127899999999887  33567899999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      ++||-.|
T Consensus       184 lltg~~p  190 (612)
T KOG0603|consen  184 LLTGTLP  190 (612)
T ss_pred             HhhCCCC
Confidence            9999999

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.09  E-value=4e-11  Score=97.90  Aligned_cols=81  Identities=15%  Similarity=0.007  Sum_probs=55.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc--------CCcCcccchHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT--------LKVAKKCGMHS  154 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~S  154 (208)
                      .+||..  +|+||+|+|++++.+|.+.|.||+.....+.....   ...+..|.+||....        ..++.+.|.|+
T Consensus       159 A~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~  235 (288)
T PF14531_consen  159 ANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ  235 (288)
T ss_dssp             HHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH
T ss_pred             HHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec---cCCCcccCChhhhhhhcccCcccceeeeccCHHH
Confidence            344444  99999999999999999999999877654432111   233467899987643        24788999999


Q ss_pred             HHHHHHHHHcCCCC
Q 039937          155 SGLLALEVMKGKHP  168 (208)
Q Consensus       155 ~Gvvl~elltg~~p  168 (208)
                      +|+++|.|..|..|
T Consensus       236 LG~~ly~lWC~~lP  249 (288)
T PF14531_consen  236 LGITLYSLWCGRLP  249 (288)
T ss_dssp             HHHHHHHHHHSS-S
T ss_pred             HHHHHHHHHHccCC
Confidence            99999999999999

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.06  E-value=1.9e-10  Score=92.83  Aligned_cols=84  Identities=27%  Similarity=0.374  Sum_probs=71.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC-cEEEcccceeeeecCCCC------Ccccccccccccccccccc---CCcCcccch
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKLDSS------NRTELAGTYGYIALELTYT---LKVAKKCGM  152 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~~~~------~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv  152 (208)
                      +++|..  +|||+||+||+++... .+++.|||.++.......      ......++..|++||....   ...+...|+
T Consensus       115 ~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~  194 (384)
T COG0515         115 EYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDI  194 (384)
T ss_pred             HHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhH
Confidence            367766  9999999999999988 799999999986554321      2356688999999999886   577899999


Q ss_pred             HHHHHHHHHHHcCCCC
Q 039937          153 HSSGLLALEVMKGKHP  168 (208)
Q Consensus       153 ~S~Gvvl~elltg~~p  168 (208)
                      ||+|++++++++|+.|
T Consensus       195 ~s~g~~~~~~~~~~~p  210 (384)
T COG0515         195 WSLGITLYELLTGLPP  210 (384)
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999999998

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.06  E-value=6.1e-10  Score=93.33  Aligned_cols=78  Identities=26%  Similarity=0.297  Sum_probs=57.2

Q ss_pred             hhcCcCCCceee--CCC--CcEEEcccceeeeecCC------CCCccccccccccccccccccCC-----cC-cccchHH
Q 039937           91 ISFTTSSKNGLL--DLE--YEARAFDFGIAKFFKLD------SSNRTELAGTYGYIALELTYTLK-----VA-KKCGMHS  154 (208)
Q Consensus        91 iH~dlk~~nill--d~~--~~~kl~dfgl~~~~~~~------~~~~~~~~g~~~y~aPE~~~~~~-----~~-~~~Dv~S  154 (208)
                      .|||+|+.|||+  |++  -...++|||.+-.-...      .+......|....||||......     ++ .|+|.|+
T Consensus       363 AhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA  442 (598)
T KOG4158|consen  363 AHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWA  442 (598)
T ss_pred             hhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhh
Confidence            999999999998  344  34589999987543221      12223345677789999876332     22 7899999


Q ss_pred             HHHHHHHHHcCCCC
Q 039937          155 SGLLALEVMKGKHP  168 (208)
Q Consensus       155 ~Gvvl~elltg~~p  168 (208)
                      .|.+.||+++...|
T Consensus       443 ~GalaYEIfg~~NP  456 (598)
T KOG4158|consen  443 AGALAYEIFGRSNP  456 (598)
T ss_pred             hhhhHHHHhccCCc
Confidence            99999999998888

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.05  E-value=3.2e-10  Score=103.39  Aligned_cols=89  Identities=13%  Similarity=0.098  Sum_probs=65.2

Q ss_pred             hcCcCCC-ceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           92 SFTTSSK-NGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        92 H~dlk~~-nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +++..|. |++++.....++.+|+.++.....  ........||+.|+|||++....++.++|||||||++|||++|+.|
T Consensus       500 ~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~p  579 (669)
T cd05610         500 TQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPP  579 (669)
T ss_pred             CCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            3455554 566676777788899988765433  1223346789999999999888899999999999999999999999


Q ss_pred             --cccHHHHHHhhc
Q 039937          169 --RHFIFSICSSSS  180 (208)
Q Consensus       169 --~~~l~~~~~~~~  180 (208)
                        .....+++...+
T Consensus       580 f~~~~~~~~~~~il  593 (669)
T cd05610         580 FNDETPQQVFQNIL  593 (669)
T ss_pred             CCCCCHHHHHHHHH
Confidence              333344444433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.03  E-value=8.4e-11  Score=101.01  Aligned_cols=74  Identities=20%  Similarity=0.247  Sum_probs=64.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC------CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +|||+||.||....+...||.|||+........      ...+.-.||..||+||.+.+..++.|+|+||+|++++|+++
T Consensus       378 ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  378 IHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            799999999999999899999999987654432      12244578999999999999999999999999999999987

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.01  E-value=5e-10  Score=85.55  Aligned_cols=91  Identities=23%  Similarity=0.279  Sum_probs=70.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl  159 (208)
                      ..++|..  +|+||+|.||+++. ...++++||+.+..............+...|++||..... ..+.+.|+|++|+++
T Consensus       105 l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~  184 (215)
T cd00180         105 LEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL  184 (215)
T ss_pred             HHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHH
Confidence            3456655  99999999999999 8999999999998765442122334567889999988766 778999999999999


Q ss_pred             HHHHcCCCCcccHHHHHHhhcC
Q 039937          160 LEVMKGKHPRHFIFSICSSSSN  181 (208)
Q Consensus       160 ~elltg~~p~~~l~~~~~~~~~  181 (208)
                      +++       ..+.+.+...+.
T Consensus       185 ~~l-------~~~~~~l~~~l~  199 (215)
T cd00180         185 YEL-------PELKDLIRKMLQ  199 (215)
T ss_pred             HHH-------HHHHHHHHHHhh
Confidence            998       345555655554

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.93  E-value=9.3e-10  Score=101.94  Aligned_cols=85  Identities=18%  Similarity=0.042  Sum_probs=66.2

Q ss_pred             HHHhhhh--hhcCcCCCceeeC-------CCCcEEEcccceeeeecC--CCCCccccccccccccccccccCCcCcccch
Q 039937           84 EKLLRQE--ISFTTSSKNGLLD-------LEYEARAFDFGIAKFFKL--DSSNRTELAGTYGYIALELTYTLKVAKKCGM  152 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld-------~~~~~kl~dfgl~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv  152 (208)
                      -++||..  ||+||||.|.||.       +....+|+|||.+.-+..  +.........|-++-++|...+..++.+.|-
T Consensus       807 ve~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~Dy  886 (974)
T KOG1166|consen  807 VEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDY  886 (974)
T ss_pred             HHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhh
Confidence            3444444  9999999999993       345679999998865432  2333445677888899999889999999999


Q ss_pred             HHHHHHHHHHHcCCCC
Q 039937          153 HSSGLLALEVMKGKHP  168 (208)
Q Consensus       153 ~S~Gvvl~elltg~~p  168 (208)
                      |.++.+++-|+-|+.-
T Consensus       887 fGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  887 FGLAATVHVMLFGKYM  902 (974)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999988753

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.90  E-value=2.4e-09  Score=85.91  Aligned_cols=107  Identities=17%  Similarity=0.102  Sum_probs=68.4

Q ss_pred             cCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcC---cccchHHHHHHHHHHHcCCCCc
Q 039937           93 FTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVA---KKCGMHSSGLLALEVMKGKHPR  169 (208)
Q Consensus        93 ~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~---~~~Dv~S~Gvvl~elltg~~p~  169 (208)
                      ..+.+..+++|++.+++++ .+-.++.-..    ....-.+.||+||.++..+.+   ..+|+|||++++||+.|+..|.
T Consensus       315 ~~lns~hvmidedltaris-mad~kfsfqe----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf  389 (448)
T KOG0195|consen  315 FYLNSKHVMIDEDLTARIS-MADTKFSFQE----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF  389 (448)
T ss_pred             hhcccceEEecchhhhhee-cccceeeeec----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence            3577888999999998875 2223332211    122346789999998865543   6789999999999999999993


Q ss_pred             ccHHHH--HHhhcCCCCCCccccCCCCCchHHHHhcccc
Q 039937          170 HFIFSI--CSSSSNFVIAPHEILDPRFQPHHTMFGVNCY  206 (208)
Q Consensus       170 ~~l~~~--~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~  206 (208)
                      .++...  --+..-++  +.--+.|-+...+.++.-.|.
T Consensus       390 adlspmecgmkialeg--lrv~ippgis~hm~klm~icm  426 (448)
T KOG0195|consen  390 ADLSPMECGMKIALEG--LRVHIPPGISRHMNKLMNICM  426 (448)
T ss_pred             ccCCchhhhhhhhhcc--ccccCCCCccHHHHHHHHHHh
Confidence            222211  11111222  555566777666666666664

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.87  E-value=5.5e-10  Score=100.28  Aligned_cols=84  Identities=20%  Similarity=0.306  Sum_probs=71.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CCCccccccccccccccccccCCcC-cccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SSNRTELAGTYGYIALELTYTLKVA-KKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~S~Gv  157 (208)
                      +|+|..  .|||+|++|++++.++.+|++|||.+....-.    ......+.|+..|+|||.+....+. ...||||.|+
T Consensus       434 ~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~i  513 (601)
T KOG0590|consen  434 KYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGI  513 (601)
T ss_pred             HHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccc
Confidence            666665  89999999999999999999999988765443    1345577899999999999888776 6679999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      ++..|++|+.|
T Consensus       514 i~~~m~~~~~~  524 (601)
T KOG0590|consen  514 IYICMILGRFP  524 (601)
T ss_pred             eEEEEecCCCc
Confidence            99999999999

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.73  E-value=1.1e-08  Score=80.04  Aligned_cols=86  Identities=9%  Similarity=-0.046  Sum_probs=60.2

Q ss_pred             hHHHhhhh--hhcCc-CCCceeeCCCCcEEEcccceeeeecCCCCC-------------cccccccccccccccccc-CC
Q 039937           83 LEKLLRQE--ISFTT-SSKNGLLDLEYEARAFDFGIAKFFKLDSSN-------------RTELAGTYGYIALELTYT-LK  145 (208)
Q Consensus        83 L~~~Lh~~--iH~dl-k~~nilld~~~~~kl~dfgl~~~~~~~~~~-------------~~~~~g~~~y~aPE~~~~-~~  145 (208)
                      ..+++|..  +|||| ||.|||++.++.++|+|||++.........             ......++.|+.|+.... ..
T Consensus       103 ~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~  182 (218)
T PRK12274        103 LLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKR  182 (218)
T ss_pred             HHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhcc
Confidence            33455655  99999 799999999999999999999865543211             001124667777764321 12


Q ss_pred             cC-cccchHHHHHHHHHHHcCCCC
Q 039937          146 VA-KKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       146 ~~-~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      .+ ...+.++-|.-+|.++||..|
T Consensus       183 ~~~~~~~w~~~g~~~~~~~~~~~~  206 (218)
T PRK12274        183 TSWIRELWFATGKPVYRFVTRRVL  206 (218)
T ss_pred             chhHHHHHHHhcchHHHHHhccCC
Confidence            23 556778899999999999887

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.66  E-value=1.7e-08  Score=93.60  Aligned_cols=86  Identities=19%  Similarity=0.054  Sum_probs=59.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeee--cCC-CCCcc----ccccccccccccccccC-----------CcCcccch
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFF--KLD-SSNRT----ELAGTYGYIALELTYTL-----------KVAKKCGM  152 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~--~~~-~~~~~----~~~g~~~y~aPE~~~~~-----------~~~~~~Dv  152 (208)
                      .|+|||.+|||++.-..+.++||.--|..  +.+ .....    +.....-|+|||.+...           ..+++.||
T Consensus       142 cHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDI  221 (1431)
T KOG1240|consen  142 CHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDI  221 (1431)
T ss_pred             cccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhh
Confidence            99999999999999999999999755422  222 11111    11122359999976531           25688899


Q ss_pred             HHHHHHHHHHHcCCCCcccHHHHH
Q 039937          153 HSSGLLALEVMKGKHPRHFIFSIC  176 (208)
Q Consensus       153 ~S~Gvvl~elltg~~p~~~l~~~~  176 (208)
                      ||.||++.||++-..|...+.|..
T Consensus       222 FS~GCViaELf~Eg~PlF~LSQL~  245 (1431)
T KOG1240|consen  222 FSAGCVIAELFLEGRPLFTLSQLL  245 (1431)
T ss_pred             hhhhHHHHHHHhcCCCcccHHHHH
Confidence            999999999998444434455543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.65  E-value=5.2e-09  Score=83.12  Aligned_cols=59  Identities=12%  Similarity=0.032  Sum_probs=43.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||++|+||+++.++ +++.|||...........            ..+.....+..++|+||+|+++...
T Consensus       157 ~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        157 VSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             ccCCCChHHEEEeCCC-EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHH
Confidence            9999999999999888 999999977654322111            0122334456789999999998765

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.46  E-value=1.8e-07  Score=81.39  Aligned_cols=85  Identities=19%  Similarity=0.250  Sum_probs=65.2

Q ss_pred             HHHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccC---C----cCcccc
Q 039937           84 EKLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTL---K----VAKKCG  151 (208)
Q Consensus        84 ~~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~---~----~~~~~D  151 (208)
                      ..|+|..   .|+.++++|.++|....+|++|||+.......  ........-..-|.|||.+...   .    .+.++|
T Consensus        61 l~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gd  140 (484)
T KOG1023|consen   61 LAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGD  140 (484)
T ss_pred             HHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCC
Confidence            4566655   89999999999999999999999998776421  1111112234568999988642   1    467899


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      +||||++++|+++.+.|
T Consensus       141 iYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen  141 IYSFGIIMYEILFRSGP  157 (484)
T ss_pred             eehHHHHHHHHHhccCc
Confidence            99999999999999999

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.38  E-value=3.5e-07  Score=70.64  Aligned_cols=36  Identities=19%  Similarity=0.049  Sum_probs=30.5

Q ss_pred             HHHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           84 EKLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        84 ~~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      ..++|. .  +||||||.||+++ ++.++++|||++....
T Consensus       130 l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         130 MRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             HHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence            345666 4  9999999999999 7899999999987754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.31  E-value=3.8e-07  Score=78.33  Aligned_cols=61  Identities=21%  Similarity=0.207  Sum_probs=49.2

Q ss_pred             CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937          104 LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus       104 ~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      .+.++||+|||-+.-....   .+.-.-|..|.+||++.+..+++.+|||||+|+++||+||-.
T Consensus       389 ~di~vKIaDlGNACW~~kh---FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDy  449 (590)
T KOG1290|consen  389 CDIRVKIADLGNACWVHKH---FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDY  449 (590)
T ss_pred             cceeEEEeeccchhhhhhh---hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCce
Confidence            3567899999987654432   111234788999999999999999999999999999999975

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.27  E-value=4.2e-07  Score=81.06  Aligned_cols=29  Identities=17%  Similarity=0.291  Sum_probs=26.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      +|||+||+||++ .++.++++|||+++...
T Consensus       450 iHrDlkp~NILl-~~~~~~liDFGla~~~~  478 (535)
T PRK09605        450 VHGDLTTSNFIV-RDDRLYLIDFGLGKYSD  478 (535)
T ss_pred             ccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence            999999999999 67889999999987643

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.27  E-value=1.1e-06  Score=68.13  Aligned_cols=29  Identities=21%  Similarity=-0.016  Sum_probs=26.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFF  119 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~  119 (208)
                      +||||||.||+++.++.++++|||.+...
T Consensus       147 ~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         147 IHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             CcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            99999999999999999999999988543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.19  E-value=4.7e-07  Score=81.55  Aligned_cols=86  Identities=20%  Similarity=0.226  Sum_probs=70.1

Q ss_pred             hHHHhh-hh--hhcCcCCCceeeCCCC-cEEEcccceeeeecC-C--CCCcccccc-ccccccccccccC-CcCcccchH
Q 039937           83 LEKLLR-QE--ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKL-D--SSNRTELAG-TYGYIALELTYTL-KVAKKCGMH  153 (208)
Q Consensus        83 L~~~Lh-~~--iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~-~--~~~~~~~~g-~~~y~aPE~~~~~-~~~~~~Dv~  153 (208)
                      ...|+| ..  .|||+||+|.+++..+ ..+++|||++..... .  ........| ++.|+|||..... ......|+|
T Consensus       135 ~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~  214 (601)
T KOG0590|consen  135 GLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVW  214 (601)
T ss_pred             CccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccc
Confidence            455677 32  9999999999999999 999999999987765 3  222334567 8999999988763 446888999


Q ss_pred             HHHHHHHHHHcCCCC
Q 039937          154 SSGLLALEVMKGKHP  168 (208)
Q Consensus       154 S~Gvvl~elltg~~p  168 (208)
                      |.|+++.-+++|..|
T Consensus       215 S~g~~l~~~~~g~~p  229 (601)
T KOG0590|consen  215 SLGIVLSAMLTGELP  229 (601)
T ss_pred             cccccccccccCCCC
Confidence            999999999999999

>PRK10345 hypothetical protein; Provisional

Probab=98.10  E-value=2.8e-06  Score=66.85  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=27.4

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCC----CCcEEEcc-cceee
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDL----EYEARAFD-FGIAK  117 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~----~~~~kl~d-fgl~~  117 (208)
                      +.+|+|.+  +||||||+||+++.    +..++|+| ||...
T Consensus       117 l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345        117 LKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             HHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence            55777877  99999999999973    34799999 45433

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.90  E-value=9.8e-06  Score=61.89  Aligned_cols=36  Identities=19%  Similarity=0.065  Sum_probs=29.7

Q ss_pred             HHHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           84 EKLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        84 ~~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      ..++|. .  +|+|+||+||+++ ++.++++|||.+....
T Consensus       127 l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         127 MRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             HHHHhhccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence            345555 3  9999999999999 8999999999886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.90  E-value=1e-05  Score=63.07  Aligned_cols=28  Identities=29%  Similarity=0.364  Sum_probs=25.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFF  119 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~  119 (208)
                      +|+|++|.||+++ ++.++++|||.+...
T Consensus       117 ~H~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879        117 IHGDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             ccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence            9999999999999 788999999988753

>smart00090 RIO RIO-like kinase

Probab=97.87  E-value=8.1e-06  Score=65.40  Aligned_cols=29  Identities=14%  Similarity=0.022  Sum_probs=26.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      +|||+||+||+++ ++.+++.|||.+....
T Consensus       171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      171 VHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             EeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            9999999999999 8899999999887544

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.83  E-value=1.2e-05  Score=62.06  Aligned_cols=28  Identities=18%  Similarity=0.336  Sum_probs=25.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFF  119 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~  119 (208)
                      +|+|++|.||+++ ++.+++.|||++...
T Consensus       112 ~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724       112 VHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             ecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            9999999999999 789999999987654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.72  E-value=4.5e-05  Score=67.01  Aligned_cols=77  Identities=19%  Similarity=0.168  Sum_probs=62.1

Q ss_pred             hhcCcCCCceeeCCC-CcEEEcccceeeeecCCCCCc-----cccccccccccccccccCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDSSNR-----TELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~~~~-----~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +|-|+||.||.+..+ ...++.||++...+....-..     ....+..-|++||... +.++..+|+|++|.++++..+
T Consensus       244 ~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l  322 (524)
T KOG0601|consen  244 VHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAIL  322 (524)
T ss_pred             cccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHh
Confidence            999999999999988 889999999998887652111     1225667799999764 556788999999999999988


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      +..+
T Consensus       323 ~~~~  326 (524)
T KOG0601|consen  323 GSHL  326 (524)
T ss_pred             hccc
Confidence            8765

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.64  E-value=2.3e-05  Score=60.58  Aligned_cols=34  Identities=15%  Similarity=0.082  Sum_probs=28.1

Q ss_pred             HHh-hhh--hhcCcCCCceeeCCCCcEEEcccceeeee
Q 039937           85 KLL-RQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFF  119 (208)
Q Consensus        85 ~~L-h~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~  119 (208)
                      +++ |..  +||||||+||+++ ++.+++.|||++...
T Consensus       131 ~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         131 RILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             HHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            455 453  9999999999998 478999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.44  E-value=0.00014  Score=63.37  Aligned_cols=31  Identities=19%  Similarity=0.129  Sum_probs=28.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKL  121 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~  121 (208)
                      +|+|++|.||+++.++.+++.|||++..+.+
T Consensus       279 ~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       279 FHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             eeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            9999999999999999999999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.38  E-value=2.7e-05  Score=69.71  Aligned_cols=85  Identities=11%  Similarity=0.095  Sum_probs=65.9

Q ss_pred             HHHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-----C----ccccccccccccccccccCCcCcccc
Q 039937           84 EKLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-----N----RTELAGTYGYIALELTYTLKVAKKCG  151 (208)
Q Consensus        84 ~~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-----~----~~~~~g~~~y~aPE~~~~~~~~~~~D  151 (208)
                      ..|+|..   +|++|.|++|.++..+.-|++.|+.+........     .    ..-......|.|||++.....+.++|
T Consensus       112 l~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd  191 (700)
T KOG2137|consen  112 LAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASD  191 (700)
T ss_pred             hhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccccccccc
Confidence            3567766   9999999999999999999999998766554211     0    01123355799999998878889999


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      +||+|++++.+..|.++
T Consensus       192 ~fSlG~li~~i~~~gk~  208 (700)
T KOG2137|consen  192 VFSLGVLIYTIYNGGKS  208 (700)
T ss_pred             ceeeeeEEEEEecCCcc
Confidence            99999999988855555

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.22  E-value=0.00019  Score=57.49  Aligned_cols=36  Identities=17%  Similarity=0.110  Sum_probs=30.2

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeee
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFF  119 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~  119 (208)
                      ..++|..  +||||||.|||++.++.++++|||.+...
T Consensus       155 l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        155 IARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             HHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence            3445555  99999999999999889999999987664

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.13  E-value=0.00037  Score=62.09  Aligned_cols=31  Identities=19%  Similarity=0.212  Sum_probs=28.3

Q ss_pred             hhcCcCCCceeeCCCC----cEEEcccceeeeecC
Q 039937           91 ISFTTSSKNGLLDLEY----EARAFDFGIAKFFKL  121 (208)
Q Consensus        91 iH~dlk~~nilld~~~----~~kl~dfgl~~~~~~  121 (208)
                      +|+|++|.||+++.++    ..++.|||+......
T Consensus       282 fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        282 FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             eeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            9999999999999887    999999999987654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.94  E-value=0.00075  Score=63.41  Aligned_cols=84  Identities=23%  Similarity=0.280  Sum_probs=65.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecC---------------------C------C----CCcccccc
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKL---------------------D------S----SNRTELAG  131 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~---------------------~------~----~~~~~~~g  131 (208)
                      ++||..  .|||++|.+++...++.-++.+|+.......                     .      .    .......+
T Consensus       918 e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  997 (1205)
T KOG0606|consen  918 ESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVG  997 (1205)
T ss_pred             hccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccC
Confidence            444443  8999999999999999999999874321110                     0      0    01123468


Q ss_pred             ccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          132 TYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       132 ~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      |+.|.+||...+......+|.|++|++++|.++|..|
T Consensus       998 t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen  998 TPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred             CCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence            9999999999988888899999999999999999998

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.83  E-value=0.00052  Score=59.50  Aligned_cols=23  Identities=9%  Similarity=-0.039  Sum_probs=19.8

Q ss_pred             cCCCCCceeccCCCceEEehhhh
Q 039937           60 NNFDDEHCIGKDGQGVVTKLRYH   82 (208)
Q Consensus        60 ~~f~~~~~lg~G~~g~Vy~~~~~   82 (208)
                      ..|...++||=|.|++||.+.+.
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDt  100 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDT  100 (590)
T ss_pred             ceEEEEEeccccccceeEEEeec
Confidence            45667789999999999999887

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.65  E-value=0.009  Score=51.60  Aligned_cols=77  Identities=12%  Similarity=0.120  Sum_probs=56.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      .-+|+.++|+|+.++..+.+.|-.--..- ..........|...|.+||...     +..-+...|.|.+|+++++++.|
T Consensus       139 ~vGDVn~~~~lVsd~~~V~LVdsDsfqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~g  217 (637)
T COG4248         139 VVGDVNQNSFLVSDDSKVVLVDSDSFQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFG  217 (637)
T ss_pred             cccccCccceeeecCceEEEEcccceeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhc
Confidence            55899999999999999999874322222 2222333456788999999654     22345778999999999999875


Q ss_pred             -CCC
Q 039937          166 -KHP  168 (208)
Q Consensus       166 -~~p  168 (208)
                       ++|
T Consensus       218 grHP  221 (637)
T COG4248         218 GRHP  221 (637)
T ss_pred             CCCC
Confidence             888

>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []

Probab=96.47  E-value=0.00063  Score=33.43  Aligned_cols=18  Identities=44%  Similarity=0.547  Sum_probs=16.2

Q ss_pred             CCCEEecccCCCcccCCCC
Q 039937            3 WLSRIDISYNALQGPIPDS   21 (208)
Q Consensus         3 ~L~~l~ls~N~l~g~ip~~   21 (208)
                      +|++||||+|+|+ .||+.
T Consensus         1 ~L~~Ldls~n~l~-~ip~~   18 (22)
T PF00560_consen    1 NLEYLDLSGNNLT-SIPSS   18 (22)
T ss_dssp             TESEEEETSSEES-EEGTT
T ss_pred             CccEEECCCCcCE-eCChh
Confidence            5899999999999 89974

LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.43  E-value=0.0011  Score=58.54  Aligned_cols=82  Identities=17%  Similarity=0.100  Sum_probs=55.3

Q ss_pred             hhcCcCCCceeeCCC-CcEEEcccceeeeecCCCCCccccccccccc--cccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYI--ALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~--aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +|+|+||+||++..+ +..++.||+.+..+.-..   ......-++.  ++..........+.|++|||.-+.|.+++..
T Consensus       388 ~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~---~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~  464 (524)
T KOG0601|consen  388 VHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS---GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP  464 (524)
T ss_pred             hcccccccceeeccchhhhhccccccccccceec---ccccccccccccchhhccccccccccccccccccccccccCcc
Confidence            999999999999876 888999999886322111   1111222333  4444445566789999999999999888876


Q ss_pred             CcccHHHH
Q 039937          168 PRHFIFSI  175 (208)
Q Consensus       168 p~~~l~~~  175 (208)
                      -.....+|
T Consensus       465 ls~~~~~~  472 (524)
T KOG0601|consen  465 LSESGVQS  472 (524)
T ss_pred             cCcccccc
Confidence            53333333

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=96.19  E-value=0.0024  Score=45.90  Aligned_cols=28  Identities=18%  Similarity=0.035  Sum_probs=25.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|++|.||+++..+.+++.||+.+..
T Consensus       111 ~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120         111 CHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             EecCCCcceEEEECCcEEEEEecccccC
Confidence            8999999999999989999999997754

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN03150 hypothetical protein; Provisional

Probab=96.12  E-value=0.0046  Score=56.38  Aligned_cols=47  Identities=23%  Similarity=0.459  Sum_probs=27.6

Q ss_pred             CCCCCEEecccCCCcccCCCCcc--cCcCCcccccCCCCcCCCcCCCCCc
Q 039937            1 MHWLSRIDISYNALQGPIPDSTT--FRDAPMKALQGNKRLCGDIRGFPSC   48 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~~~--~~~~~~~~~~~n~~l~~~~~~~~~c   48 (208)
                      |++|+.|||++|+|+|.+|....  +.......+.+|+.+|+.+ .+++|
T Consensus       489 L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p-~l~~C  537 (623)
T PLN03150        489 LTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP-GLRAC  537 (623)
T ss_pred             CCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCC-CCCCC
Confidence            34566666666666666665411  1223345677888888754 34566

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=95.83  E-value=0.012  Score=45.37  Aligned_cols=29  Identities=24%  Similarity=0.245  Sum_probs=23.7

Q ss_pred             hhcCcCCCceeeCCCC---cEEEcccceeeee
Q 039937           91 ISFTTSSKNGLLDLEY---EARAFDFGIAKFF  119 (208)
Q Consensus        91 iH~dlk~~nilld~~~---~~kl~dfgl~~~~  119 (208)
                      +|+||.++||+|..++   .+.+.|||++...
T Consensus       135 iHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  135 IHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             ecccccccceEEecCCCcCceEEEeecchhcc
Confidence            9999999999996554   3479999988654

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.64  E-value=0.0063  Score=45.32  Aligned_cols=27  Identities=22%  Similarity=0.108  Sum_probs=23.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|++|.||+++ ++.+++.||+.+..
T Consensus       110 ~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151         110 CHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             ecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            9999999999999 56789999997653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.19  E-value=0.013  Score=45.16  Aligned_cols=36  Identities=19%  Similarity=0.221  Sum_probs=28.8

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      ---||..  +|+|+.++||++.... +.+.|||++....
T Consensus       105 vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~  142 (204)
T COG3642         105 VGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD  142 (204)
T ss_pred             HHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence            3445555  9999999999998766 8899999987543

>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D

Probab=94.97  E-value=0.015  Score=26.59  Aligned_cols=14  Identities=36%  Similarity=0.411  Sum_probs=9.9

Q ss_pred             CCCCEEecccCCCc
Q 039937            2 HWLSRIDISYNALQ   15 (208)
Q Consensus         2 ~~L~~l~ls~N~l~   15 (208)
                      ++|++|+||+|+|+
T Consensus         1 ~~L~~L~l~~n~L~   14 (17)
T PF13504_consen    1 PNLRTLDLSNNRLT   14 (17)
T ss_dssp             TT-SEEEETSS--S
T ss_pred             CccCEEECCCCCCC
Confidence            57999999999986

...

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=94.75  E-value=0.031  Score=46.77  Aligned_cols=75  Identities=12%  Similarity=0.006  Sum_probs=54.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-----CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-----SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +|+++.-..|++..++-+|+...... .....     ........+.++|.+||+-...+.+..+|||+||...+|+..+
T Consensus       200 ihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail  278 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL  278 (458)
T ss_pred             ccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence            99999999999999888887542211 11111     1112233467899999998888888999999999999998765


Q ss_pred             C
Q 039937          166 K  166 (208)
Q Consensus       166 ~  166 (208)
                      .
T Consensus       279 E  279 (458)
T KOG1266|consen  279 E  279 (458)
T ss_pred             e
Confidence            5

>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A

Probab=94.19  E-value=0.018  Score=28.64  Aligned_cols=18  Identities=22%  Similarity=0.182  Sum_probs=12.9

Q ss_pred             CCCCCEEecccCCCcccC
Q 039937            1 MHWLSRIDISYNALQGPI   18 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~i   18 (208)
                      +++|++|||++|++++..
T Consensus         1 ~~~L~~L~l~~n~i~~~g   18 (24)
T PF13516_consen    1 NPNLETLDLSNNQITDEG   18 (24)
T ss_dssp             -TT-SEEE-TSSBEHHHH
T ss_pred             CCCCCEEEccCCcCCHHH
Confidence            578999999999988653

...

>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B

Probab=94.14  E-value=0.026  Score=32.75  Aligned_cols=34  Identities=21%  Similarity=0.339  Sum_probs=24.6

Q ss_pred             CCCCEEecccCCCcccCCC-CcccCcCCcccccCCC
Q 039937            2 HWLSRIDISYNALQGPIPD-STTFRDAPMKALQGNK   36 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~-~~~~~~~~~~~~~~n~   36 (208)
                      ++|++|++++|+++ .||. -..+.++....+.+|.
T Consensus         1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~   35 (44)
T PF12799_consen    1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNP   35 (44)
T ss_dssp             TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSC
T ss_pred             CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCC
Confidence            57999999999999 4665 5667777777777774

...

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=94.14  E-value=0.031  Score=43.47  Aligned_cols=32  Identities=13%  Similarity=-0.096  Sum_probs=25.9

Q ss_pred             hhh--hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           88 RQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        88 h~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      |..  +|+|+++.||++++ +.+.++||+-+....
T Consensus       142 H~~glVHGDLs~~NIL~~~-~~v~iIDF~qav~~~  175 (197)
T cd05146         142 KECNLVHADLSEYNMLWHD-GKVWFIDVSQSVEPT  175 (197)
T ss_pred             HhCCeecCCCCHHHEEEEC-CcEEEEECCCceeCC
Confidence            544  99999999999974 678999999775543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=94.09  E-value=0.09  Score=47.68  Aligned_cols=80  Identities=10%  Similarity=-0.021  Sum_probs=53.0

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .|||+.   +|++|.-..|+++..|+-||.+|.++.....-........---.|..|+.+....  -..|.|-||++++|
T Consensus       118 ~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~e  195 (690)
T KOG1243|consen  118 SFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEE  195 (690)
T ss_pred             HHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHH
Confidence            455543   9999999999999999999999987755432221111111122345555433211  24599999999999


Q ss_pred             HHcCC
Q 039937          162 VMKGK  166 (208)
Q Consensus       162 lltg~  166 (208)
                      ++.|.
T Consensus       196 l~ng~  200 (690)
T KOG1243|consen  196 LFNGS  200 (690)
T ss_pred             HhCcc
Confidence            99993

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=93.13  E-value=0.1  Score=42.69  Aligned_cols=24  Identities=17%  Similarity=0.061  Sum_probs=22.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFG  114 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfg  114 (208)
                      +|+|+++-||++++++.+.+.||-
T Consensus       224 VHGDlSefNIlV~~dg~~~vIDwP  247 (304)
T COG0478         224 VHGDLSEFNILVTEDGDIVVIDWP  247 (304)
T ss_pred             cccCCchheEEEecCCCEEEEeCc
Confidence            999999999999999999999984

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=92.31  E-value=0.1  Score=40.31  Aligned_cols=29  Identities=28%  Similarity=0.132  Sum_probs=22.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      +|+|+.+.||+++++ .+.+.|||.+....
T Consensus       129 vHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  129 VHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             EESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             eecCCChhhEEeecc-eEEEEecCcceecC
Confidence            999999999999987 89999999776543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>smart00370 LRR Leucine-rich repeats, outliers

Probab=91.93  E-value=0.12  Score=25.99  Aligned_cols=17  Identities=29%  Similarity=0.380  Sum_probs=14.8

Q ss_pred             CCCCCEEecccCCCccc
Q 039937            1 MHWLSRIDISYNALQGP   17 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~   17 (208)
                      |++|+.|+|++|+++--
T Consensus         1 L~~L~~L~L~~N~l~~l   17 (26)
T smart00370        1 LPNLRELDLSNNQLSSL   17 (26)
T ss_pred             CCCCCEEECCCCcCCcC
Confidence            67899999999998754

>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily

Probab=91.93  E-value=0.12  Score=25.99  Aligned_cols=17  Identities=29%  Similarity=0.380  Sum_probs=14.8

Q ss_pred             CCCCCEEecccCCCccc
Q 039937            1 MHWLSRIDISYNALQGP   17 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~   17 (208)
                      |++|+.|+|++|+++--
T Consensus         1 L~~L~~L~L~~N~l~~l   17 (26)
T smart00369        1 LPNLRELDLSNNQLSSL   17 (26)
T ss_pred             CCCCCEEECCCCcCCcC
Confidence            67899999999998754

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=91.29  E-value=0.19  Score=39.15  Aligned_cols=30  Identities=17%  Similarity=0.081  Sum_probs=25.9

Q ss_pred             hhcCcCCCceeeCCCC---cEEEcccceeeeec
Q 039937           91 ISFTTSSKNGLLDLEY---EARAFDFGIAKFFK  120 (208)
Q Consensus        91 iH~dlk~~nilld~~~---~~kl~dfgl~~~~~  120 (208)
                      +|+|+++.|||++.+.   .+.+.||+.++...
T Consensus       140 ~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  140 YHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             CCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            9999999999999876   78899998776543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>smart00364 LRR_BAC Leucine-rich repeats, bacterial type

Probab=91.29  E-value=0.11  Score=26.55  Aligned_cols=18  Identities=28%  Similarity=0.558  Sum_probs=14.4

Q ss_pred             CCCCEEecccCCCcccCCC
Q 039937            2 HWLSRIDISYNALQGPIPD   20 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~   20 (208)
                      .+|+.|++|+|+|+. +|+
T Consensus         2 ~~L~~L~vs~N~Lt~-LPe   19 (26)
T smart00364        2 PSLKELNVSNNQLTS-LPE   19 (26)
T ss_pred             cccceeecCCCcccc-Ccc
Confidence            479999999999874 453

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=91.25  E-value=0.064  Score=53.41  Aligned_cols=78  Identities=13%  Similarity=0.001  Sum_probs=65.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+++|+.|.+++.+..+|+.++|+.+..++.........+++.|+.++.....+++.++|+|..++-+++.-.|..+
T Consensus      1362 v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~ 1439 (2724)
T KOG1826|consen 1362 VSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAY 1439 (2724)
T ss_pred             hhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHH
Confidence            999999999999999999999999999555444444455667788889887777888889999999999988888877

>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A

Probab=91.23  E-value=0.1  Score=32.16  Aligned_cols=34  Identities=29%  Similarity=0.348  Sum_probs=19.7

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      ++|+.|++++|+++.--+.. ..+.++....+.+|
T Consensus         1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N   35 (61)
T PF13855_consen    1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNN   35 (61)
T ss_dssp             TTESEEEETSSTESEECTTTTTTGTTESEEEETSS
T ss_pred             CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCC
Confidence            46778888888777443332 33444555555544

...

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=91.10  E-value=0.16  Score=41.43  Aligned_cols=36  Identities=14%  Similarity=0.089  Sum_probs=27.9

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCC-------CCcEEEcccceeee
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDL-------EYEARAFDFGIAKF  118 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~-------~~~~kl~dfgl~~~  118 (208)
                      +..-+|..  +|+|++++|||++.       +..+.++||+.+..
T Consensus       150 ~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        150 MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            33345554  99999999999975       57889999997754

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=90.92  E-value=0.14  Score=39.62  Aligned_cols=28  Identities=14%  Similarity=0.112  Sum_probs=24.1

Q ss_pred             hhcCcCCCceeeCC--CCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDL--EYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~--~~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||+++.  +..+.+.||+.+..
T Consensus       177 ~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         177 VHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             EECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            99999999999998  56678999986643

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PLN03150 hypothetical protein; Provisional

Probab=89.73  E-value=0.27  Score=45.03  Aligned_cols=41  Identities=29%  Similarity=0.457  Sum_probs=27.9

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcCCCc
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLCGDI   42 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~~~   42 (208)
                      |++|+.|||++|+|+|.+|.. ..+..+....+.+| .+.+..
T Consensus       441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N-~lsg~i  482 (623)
T PLN03150        441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYN-SFNGSI  482 (623)
T ss_pred             CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCC-CCCCCC
Confidence            467899999999999999864 44455555555454 555544

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=89.61  E-value=0.27  Score=43.93  Aligned_cols=31  Identities=19%  Similarity=0.172  Sum_probs=28.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKL  121 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~  121 (208)
                      +|.|..|.||+++.+++..+.|||+.....+
T Consensus       287 fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         287 FHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             cccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            9999999999999999999999999877654

>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type

Probab=89.40  E-value=0.27  Score=25.41  Aligned_cols=14  Identities=36%  Similarity=0.413  Sum_probs=12.6

Q ss_pred             CCCCEEecccCCCc
Q 039937            2 HWLSRIDISYNALQ   15 (208)
Q Consensus         2 ~~L~~l~ls~N~l~   15 (208)
                      ++|+.|||++|.+.
T Consensus         2 ~~L~~LdL~~N~i~   15 (28)
T smart00368        2 PSLRELDLSNNKLG   15 (28)
T ss_pred             CccCEEECCCCCCC
Confidence            68999999999984

>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily

Probab=88.75  E-value=0.34  Score=24.70  Aligned_cols=16  Identities=25%  Similarity=0.436  Sum_probs=13.6

Q ss_pred             CCCCCEEecccCCCcc
Q 039937            1 MHWLSRIDISYNALQG   16 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g   16 (208)
                      +++|+.|+|++|+++-
T Consensus         1 L~~L~~L~L~~NkI~~   16 (26)
T smart00365        1 LTNLEELDLSQNKIKK   16 (26)
T ss_pred             CCccCEEECCCCccce
Confidence            5789999999999853

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=86.99  E-value=0.41  Score=36.99  Aligned_cols=28  Identities=25%  Similarity=0.164  Sum_probs=18.8

Q ss_pred             hhcCcCCCceeeC-CCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLD-LEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld-~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||+++ +++.+-+.||+.+..
T Consensus       169 ~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  169 IHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             E-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             EEeccccccceeeeccceeEEEecccceE
Confidence            9999999999999 556657999986644

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=86.90  E-value=0.41  Score=37.69  Aligned_cols=28  Identities=14%  Similarity=0.133  Sum_probs=24.5

Q ss_pred             hhcCcCCCceeeCC-CCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDL-EYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~-~~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||++++ +..+.+.||..+..
T Consensus       173 ~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         173 CHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            99999999999998 57899999986643

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B

Probab=86.61  E-value=0.5  Score=27.23  Aligned_cols=15  Identities=20%  Similarity=0.397  Sum_probs=13.9

Q ss_pred             CCCCCEEecccCCCc
Q 039937            1 MHWLSRIDISYNALQ   15 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~   15 (208)
                      |++|++||+++|+++
T Consensus        23 l~~L~~L~l~~N~i~   37 (44)
T PF12799_consen   23 LPNLETLNLSNNPIS   37 (44)
T ss_dssp             CTTSSEEEETSSCCS
T ss_pred             CCCCCEEEecCCCCC
Confidence            678999999999998

...

>PRK10271 thiK thiamine kinase; Provisional

Probab=86.58  E-value=0.44  Score=36.82  Aligned_cols=27  Identities=15%  Similarity=0.073  Sum_probs=24.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.|.|+++++++ +++.|++.+..
T Consensus        80 ~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         80 LHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             ecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            9999999999998877 88999997754

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=86.21  E-value=0.53  Score=36.58  Aligned_cols=29  Identities=21%  Similarity=0.221  Sum_probs=20.5

Q ss_pred             hhcCcCCCceee-CCCCcEEEcccceeeee
Q 039937           91 ISFTTSSKNGLL-DLEYEARAFDFGIAKFF  119 (208)
Q Consensus        91 iH~dlk~~nill-d~~~~~kl~dfgl~~~~  119 (208)
                      .|+|+.+.||++ +.++.+++.||..+..-
T Consensus       146 cHnDl~~~Nil~~~~~~~~~lIDfEya~~n  175 (211)
T PF01633_consen  146 CHNDLNPGNILINNKDGEVKLIDFEYAGYN  175 (211)
T ss_dssp             E-S--SGGGEEETSSSSCEEE--GTT-EEE
T ss_pred             eeccCccccEEeccCCCeEEEecHHHHhhc
Confidence            999999999999 88899999999887653

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=85.88  E-value=0.48  Score=37.47  Aligned_cols=27  Identities=19%  Similarity=0.100  Sum_probs=23.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAK  117 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~  117 (208)
                      +|+|+.+.||++++....-+.||+.+.
T Consensus       167 ~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         167 FHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             EeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            999999999999987666799998654

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=85.81  E-value=0.46  Score=39.00  Aligned_cols=28  Identities=21%  Similarity=0.084  Sum_probs=24.7

Q ss_pred             hhcCcCCCceeeCCC----CcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLE----YEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~----~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||+++++    ..+.+.||..+..
T Consensus       182 cH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         182 CHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             EecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            999999999999974    7899999987654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=85.79  E-value=0.51  Score=37.43  Aligned_cols=27  Identities=15%  Similarity=-0.011  Sum_probs=24.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAK  117 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~  117 (208)
                      +|+|+.|.||+++++....|.||+.+.
T Consensus       166 ~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         166 THGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             ECCCCCCccEEEeCCcEEEEEEccccc
Confidence            999999999999998778899998654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=84.81  E-value=0.53  Score=37.29  Aligned_cols=26  Identities=12%  Similarity=-0.138  Sum_probs=23.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAK  117 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~  117 (208)
                      +|+|+.|.||++++++ +.+.||+.+.
T Consensus       156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       156 LHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             EecCCCCCcEEEcCCC-cEEEechhcC
Confidence            8999999999999888 8999998664

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=83.98  E-value=0.64  Score=37.97  Aligned_cols=28  Identities=25%  Similarity=0.109  Sum_probs=24.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.|.||+++++....+.||+.+..
T Consensus       178 ~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         178 IHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CccCcCcccEEEeCCceEEEeehhhhcC
Confidence            9999999999999987778999987653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK05231 homoserine kinase; Provisional

Probab=83.90  E-value=0.68  Score=38.34  Aligned_cols=28  Identities=21%  Similarity=0.057  Sum_probs=24.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||+++++...-+.||+.+..
T Consensus       190 iHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        190 IHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             CCCCCCCCcEEEECCceEEEEecccccC
Confidence            9999999999999776668999987643

>TIGR02721 ycfN_thiK thiamine kinase

Probab=83.83  E-value=0.62  Score=37.33  Aligned_cols=27  Identities=11%  Similarity=0.095  Sum_probs=23.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.|.||++++++ ..+.||..+..
T Consensus       149 ~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       149 LHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             ecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            9999999999999877 68999987654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=83.27  E-value=0.75  Score=37.96  Aligned_cols=28  Identities=25%  Similarity=0.119  Sum_probs=24.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||+++.+....+.||+.+..
T Consensus       190 ~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       190 IHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             CCCCCCcCcEEEECCceEEEeecccccC
Confidence            9999999999999888778999987643

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A

Probab=83.05  E-value=0.87  Score=27.82  Aligned_cols=35  Identities=26%  Similarity=0.366  Sum_probs=24.1

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++||+++|+++...|.. ..+..+....+.+|
T Consensus        24 l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N   59 (61)
T PF13855_consen   24 LPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN   59 (61)
T ss_dssp             GTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred             CCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence            478999999999998766643 33444455555555

...

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=81.03  E-value=1.1  Score=42.89  Aligned_cols=19  Identities=47%  Similarity=0.716  Sum_probs=9.8

Q ss_pred             CCCCEEecccCCCcccCCC
Q 039937            2 HWLSRIDISYNALQGPIPD   20 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~   20 (208)
                      ++|+.|||++|+++|.+|.
T Consensus       547 ~~L~~L~Ls~N~l~~~~p~  565 (968)
T PLN00113        547 PVLSQLDLSQNQLSGEIPK  565 (968)
T ss_pred             ccCCEEECCCCcccccCCh
Confidence            3455555555555555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	208
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 95  TSSKNGLLDLEYEARAFDFGIAKFFKL-DSSNRTELAGTYGYIALELTYTLKVAKKCGMH 153
             + N LLD E+EA   DFG+AK     D      + GT G+IA E   T K ++K  + 
Sbjct: 168 VKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVF 227
Query: 154 SSGLLALEVMKGK 166
             G++ LE++ G+
Sbjct: 228 GYGVMLLELITGQ 240

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 53  SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
           S  D VT    DE  I    +  +  L + H  +++ ++I     S N LL ++   +  
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK----SDNILLGMDGSVKLT 158
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
           DFG       + S R+E+ GT  ++A E+        K  + S G++A+E+++G+ P
Sbjct: 159 DFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	208
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-09
1ogq_A	313	PGIP-2, polygalacturonase inhibiting protein; inhi	1e-07
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	2e-07
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	9e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 99  NGLLDLEYEARAFDFGIAKFFKLDSSN-RTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
           N LLD E+EA   DFG+AK      ++  T + GT G+IA E   T K ++K  +   G+
Sbjct: 164 NILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGV 223

Query: 158 LALEVMKGKHP 168
           + LE++ G+  
Sbjct: 224 MLLELITGQRA 234

>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313

 Score = 49.8 bits (120), Expect = 1e-07
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 4   LSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSC 48
           L  +++S+N L G IP     +   + A   NK LCG     P+C
Sbjct: 270 LHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG--SPLPAC 312

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 1   MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCG 40
           +  L+ ID+S N L GPIP+   F   P      N  LCG
Sbjct: 703 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 44.9 bits (107), Expect = 5e-06
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHS 154
           S N LLD  +  +  DFGI+K           T + GT GYI  E     ++ +K  ++S
Sbjct: 167 SINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYS 226

Query: 155 SGLLALEVMKGKHP 168
            G++  EV+  +  
Sbjct: 227 FGVVLFEVLCARSA 240

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 44.5 bits (106), Expect = 9e-06
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 99  NGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTY-TLKVAKKCGMHSS 155
           N LLD  + A+  DFG+A+  +    +   + + GT  Y+A E      ++  K  ++S 
Sbjct: 163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE--ALRGEITPKSDIYSF 220

Query: 156 GLLALEVMKGKHP 168
           G++ LE++ G   
Sbjct: 221 GVVLLEIITGLPA 233

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 7/79 (8%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALE-----LTYTLKVAKK 149
           SKN LL     A   DFG+A  F+   S  +     GT  Y+A E     + +      +
Sbjct: 159 SKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLR 218

Query: 150 CGMHSSGLLALEVMKGKHP 168
             M++ GL+  E+      
Sbjct: 219 IDMYAMGLVLWELASRCTA 237

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 4e-05
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 52/184 (28%)

Query: 1   MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTN 60
           + WL+   +                ++P   L+  ++L   I        + SR D  +N
Sbjct: 184 IFWLN---LKN-------------CNSPETVLEMLQKLLYQID-----PNWTSRSDHSSN 222

Query: 61  NFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDL-----EYEARAFDFG- 114
                H            ++  L +LL+ +       +N LL L          AF+   
Sbjct: 223 IKLRIH-----------SIQAELRRLLKSK-----PYENCLLVLLNVQNAKAWNAFNLSC 266

Query: 115 --------IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGK 166
                         L ++  T ++  +  + L       +  K        L  EV+   
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT- 325

Query: 167 HPRH 170
           +PR 
Sbjct: 326 NPRR 329

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	208
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.96
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.94
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.93
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.93
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.92
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.92
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.92
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.91
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.91
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.91
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.91
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.91
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.9
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.9
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.9
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.9
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.9
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.9
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.9
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.9
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.9
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.89
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.89
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.89
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.89
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.89
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.89
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.89
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.89
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.89
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.89
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.89
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.89
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.88
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.88
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.88
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.88
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.88
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.88
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.88
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.88
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.88
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.88
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.88
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.88
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.88
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.88
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.88
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.88
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.88
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.88
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.87
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.87
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.87
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.87
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.87
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.87
3niz_A	311	Rhodanese family protein; structural genomics, str	99.87
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.87
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.87
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.87
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.87
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.87
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.87
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.87
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.87
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.87
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.87
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.87
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.87
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.87
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.87
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.87
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.87
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.87
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.87
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.87
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.87
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.87
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.87
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.86
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.86
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.86
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.86
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.86
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.86
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.86
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.86
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.86
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.86
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.86
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.86
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.86
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.86
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.86
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.86
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.86
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.86
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.86
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.86
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.86
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.86
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.86
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.86
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.86
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.86
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.86
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.86
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.86
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.86
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.86
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.86
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.86
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.85
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.85
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.85
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.85
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.85
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.85
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.85
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.85
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.85
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.85
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.85
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.85
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.85
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.85
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.85
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.85
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.85
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.85
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.85
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.85
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.85
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.85
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.85
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.85
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.85
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.85
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.85
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.85
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.85
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.85
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.85
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.85
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.85
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.85
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.84
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.84
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.84
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.84
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.84
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.84
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.84
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.84
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.84
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.84
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.84
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.84
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.84
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.84
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.84
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.84
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.84
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.84
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.84
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.84
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.84
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.84
3bhy_A	283	Death-associated protein kinase 3; death associate	99.84
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.84
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.84
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.84
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.84
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.84
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.84
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.84
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.84
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.84
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.84
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.84
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.84
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.84
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.84
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.83
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.83
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.83
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.83
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.83
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.83
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.83
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.83
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.83
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.83
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.83
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.83
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.83
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.83
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.83
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.83
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.83
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.83
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.82
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.82
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.82
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.82
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.82
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.82
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.82
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.82
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.82
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.82
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.81
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.81
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.81
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.81
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.81
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.81
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.81
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.81
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.8
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.8
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.79
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.78
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.77
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.76
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.69
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.66
3uqc_A	286	Probable conserved transmembrane protein; structur	99.65
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.52
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.4
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.88
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	98.09
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.07
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.76
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	95.36
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	94.4
1w8a_A	192	SLIT protein; signaling protein, secreted protein,	93.93
3g39_A	170	Variable lymphocyte receptor VLRB.2D; antibody, X-	93.61
2r9u_A	174	Variable lymphocyte receptor; adaptive immunity, V	93.15
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	92.39
2v70_A	220	SLIT-2, SLIT homolog 2 protein N-product; neurogen	92.32
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	92.15
3rfe_A	130	Platelet glycoprotein IB beta chain; platelet surf	91.5
4g8a_A	635	TOLL-like receptor 4; leucine rich repeat MD-2 rel	91.37
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	91.32
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	91.06
2v9t_B	220	SLIT homolog 2 protein N-product; structural prote	90.85
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	90.78
2o6r_A	177	Variable lymphocyte receptor B; leucine-rich repea	90.49
2wfh_A	193	SLIT homolog 2 protein C-product; developmental pr	90.12
3g39_A	170	Variable lymphocyte receptor VLRB.2D; antibody, X-	89.91
1w8a_A	192	SLIT protein; signaling protein, secreted protein,	89.68
3e6j_A	229	Variable lymphocyte receptor diversity region; var	89.59
3m19_A	251	Variable lymphocyte receptor A diversity region; a	89.57
2r9u_A	174	Variable lymphocyte receptor; adaptive immunity, V	89.45
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	89.05
2z81_A	549	CD282 antigen, TOLL-like receptor 2, variable lymp	88.53
2o6s_A	208	Variable lymphocyte receptor B; leucine-rich repea	88.1
3rw6_A	267	Nuclear RNA export factor 1; retroviral constituti	88.05
3rfs_A	272	Internalin B, repeat modules, variable lymphocyte	87.73
2je0_A	149	Acidic leucine-rich nuclear phosphoprotein 32 FAM	87.51
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	87.51
2wfh_A	193	SLIT homolog 2 protein C-product; developmental pr	87.44
2ell_A	168	Acidic leucine-rich nuclear phosphoprotein 32 FAM	86.83
3j0a_A	844	TOLL-like receptor 5; membrane protein, leucine-ri	86.56
2v70_A	220	SLIT-2, SLIT homolog 2 protein N-product; neurogen	86.51
1ogq_A	313	PGIP-2, polygalacturonase inhibiting protein; inhi	86.32
4fcg_A	328	Uncharacterized protein; structural genomics, PSI-	86.08
3zyj_A	440	Leucine-rich repeat-containing protein 4C; cell ad	86.08
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	85.93
4fcg_A	328	Uncharacterized protein; structural genomics, PSI-	85.84
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	85.72
2z66_A	306	Variable lymphocyte receptor B, TOLL-like recepto;	85.67
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	85.66
2o6r_A	177	Variable lymphocyte receptor B; leucine-rich repea	85.36
1ogq_A	313	PGIP-2, polygalacturonase inhibiting protein; inhi	85.06
2v9t_B	220	SLIT homolog 2 protein N-product; structural prote	84.76
2o6q_A	270	Variable lymphocyte receptor A; leucine-rich repea	84.74
2z80_A	353	TOLL-like receptor 2, variable lymphocyte recepto;	84.73
3zyi_A	452	Leucine-rich repeat-containing protein 4; cell adh	84.38
1wwl_A	312	Monocyte differentiation antigen CD14; LPS, immune	84.12
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	84.06
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	83.99
1p9a_G	290	Platelet glycoprotein IB alpha chain precursor; pl	83.84
3ats_A	357	Putative uncharacterized protein; hypothetical pro	83.76
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	83.58
3e6j_A	229	Variable lymphocyte receptor diversity region; var	83.55
1dce_A	567	Protein (RAB geranylgeranyltransferase alpha subun	83.37
1a9n_A	176	U2A', U2A'; complex (nuclear protein/RNA), RNA, sn	82.88
2ell_A	168	Acidic leucine-rich nuclear phosphoprotein 32 FAM	82.42
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	82.26
4eco_A	636	Uncharacterized protein; leucine-rich repeats, pro	82.02
3rw6_A	267	Nuclear RNA export factor 1; retroviral constituti	81.85
2z63_A	570	TOLL-like receptor 4, variable lymphocyte recepto;	81.83
4glp_A	310	Monocyte differentiation antigen CD14; alpha beta	81.58
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	81.54
3a79_B	562	TLR6, VLRB.59, TOLL-like receptor 6, variable lymp	81.22
3v47_A	455	TOLL-like receptor 5B and variable lymphocyte REC	81.17
2xwt_C	239	Thyrotropin receptor; signaling protein-immune sys	81.11
2o6s_A	208	Variable lymphocyte receptor B; leucine-rich repea	81.03
2je0_A	149	Acidic leucine-rich nuclear phosphoprotein 32 FAM	80.61
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	80.36

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=220.66  Aligned_cols=115  Identities=18%  Similarity=0.162  Sum_probs=81.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccc---cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+|||+++++.+||+|||+++.....  ........||+.|||||.+.   .+.++.++|||||||++|||+||
T Consensus       154 iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg  233 (307)
T 3omv_A          154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG  233 (307)
T ss_dssp             BCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHC
Confidence            99999999999999999999999999876543  22334568999999999985   34689999999999999999999


Q ss_pred             CCCcc---c---HHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          166 KHPRH---F---IFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       166 ~~p~~---~---l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +.|..   .   +...+.......  ....+.+.+...+..+...|++
T Consensus       234 ~~Pf~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~l~~li~~cl~  279 (307)
T 3omv_A          234 ELPYSHINNRDQIIFMVGRGYASP--DLSKLYKNCPKAMKRLVADCVK  279 (307)
T ss_dssp             SCTTTTCCCHHHHHHHHHTTCCCC--CSTTSCTTSCHHHHHHHHHHTC
T ss_pred             CCCCCCCChHHHHHHHHhcCCCCC--CcccccccchHHHHHHHHHHcC
Confidence            99922   1   112222222111  1122344566678888888876

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=1.4e-30  Score=217.41  Aligned_cols=85  Identities=25%  Similarity=0.356  Sum_probs=76.1

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|||.+  +||||||+|||++.++.+||+|||+++............+||+.|||||.+....++.++||||+||++||
T Consensus       183 L~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilye  262 (346)
T 4fih_A          183 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE  262 (346)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence            3455555  99999999999999999999999999987665445566789999999999998899999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       263 ml~G~~P  269 (346)
T 4fih_A          263 MVDGEPP  269 (346)
T ss_dssp             HHHSSCT
T ss_pred             HHHCCCC
Confidence            9999999

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=2.2e-30  Score=213.41  Aligned_cols=120  Identities=18%  Similarity=0.206  Sum_probs=89.8

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .+|||.+  +||||||+|||++.++.+||+|||+++.....  .......+||+.|||||.+....++.++||||+||++
T Consensus       145 l~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvil  224 (311)
T 4aw0_A          145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII  224 (311)
T ss_dssp             HHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHH
Confidence            3455554  99999999999999999999999999987643  2234567899999999999988899999999999999


Q ss_pred             HHHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |||+||+.|  ..+..+.........  .  .++..+..++..+-..|++
T Consensus       225 yeml~G~~PF~~~~~~~~~~~i~~~~--~--~~p~~~s~~~~dli~~lL~  270 (311)
T 4aw0_A          225 YQLVAGLPPFRAGNEGLIFAKIIKLE--Y--DFPEKFFPKARDLVEKLLV  270 (311)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTC--C--CCCTTCCHHHHHHHHHHSC
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCC--C--CCCcccCHHHHHHHHHHcc
Confidence            999999999  333434333333222  1  1234455566666666654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.96  E-value=1.6e-30  Score=214.48  Aligned_cols=114  Identities=12%  Similarity=0.065  Sum_probs=87.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      |||||||+|||+++++.+||+|||+++.....  ........||+.|||||.+..+.++.++|||||||++|||+| |+.
T Consensus       167 iHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~  246 (308)
T 4gt4_A          167 VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ  246 (308)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCC
Confidence            99999999999999999999999999876443  223345678999999999999999999999999999999998 888


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  ...-.+.+.... .+. ... ..+.....+.++...|++
T Consensus       247 Pf~~~~~~~~~~~i~-~~~-~~~-~p~~~~~~~~~li~~C~~  285 (308)
T 4gt4_A          247 PYCGYSNQDVVEMIR-NRQ-VLP-CPDDCPAWVYALMIECWN  285 (308)
T ss_dssp             TTTTCCHHHHHHHHH-TTC-CCC-CCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHH-cCC-CCC-CcccchHHHHHHHHHHcC
Confidence            8  222223332222 221 211 244566688889999986

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.96  E-value=2.9e-30  Score=212.28  Aligned_cols=120  Identities=19%  Similarity=0.153  Sum_probs=87.8

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|+|++  +||||||+|||++.++.+||+|||+++.............||+.|||||.+....++.++||||+||++||
T Consensus       139 L~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye  218 (304)
T 3ubd_A          139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE  218 (304)
T ss_dssp             HHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHH
Confidence            3456655  99999999999999999999999999876554444456789999999999998899999999999999999


Q ss_pred             HHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 lltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+||+.|  ..+..+.........-    .+.+.+...+..+-..|++
T Consensus       219 mltG~~PF~~~~~~~~~~~i~~~~~----~~p~~~s~~~~~li~~~L~  262 (304)
T 3ubd_A          219 MLTGTLPFQGKDRKETMTMILKAKL----GMPQFLSPEAQSLLRMLFK  262 (304)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCC----CCCTTSCHHHHHHHHHHTC
T ss_pred             HHhCCCCCCCcCHHHHHHHHHcCCC----CCCCcCCHHHHHHHHHHcc
Confidence            9999999  3333343333332221    1233455566666666654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=5.8e-31  Score=220.12  Aligned_cols=114  Identities=15%  Similarity=0.106  Sum_probs=87.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC--
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP--  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p--  168 (208)
                      +||||||+|||++.++.+||+|||+++.............||+.|||||.+.+..++.++||||+||++|||+||+.|  
T Consensus       147 iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~  226 (350)
T 4b9d_A          147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE  226 (350)
T ss_dssp             EETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             eeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            999999999999999999999999998765432223456799999999999988999999999999999999999999  


Q ss_pred             cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..+..+.+.......  . .-+...+...+..+-..|++
T Consensus       227 ~~~~~~~~~~i~~~~--~-~~~~~~~s~~~~~li~~~L~  262 (350)
T 4b9d_A          227 AGSMKNLVLKIISGS--F-PPVSLHYSYDLRSLVSQLFK  262 (350)
T ss_dssp             CSSHHHHHHHHHHTC--C-CCCCTTSCHHHHHHHHHHTC
T ss_pred             CcCHHHHHHHHHcCC--C-CCCCccCCHHHHHHHHHHcc
Confidence            334444444443332  1 12344555566666666664

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=7.4e-30  Score=218.07  Aligned_cols=85  Identities=25%  Similarity=0.356  Sum_probs=76.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|||.+  +||||||+|||++.++.+||+|||+++............+||+.|||||.+....++.++||||+||++||
T Consensus       260 L~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilye  339 (423)
T 4fie_A          260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE  339 (423)
T ss_dssp             HHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence            3466655  99999999999999999999999999987665445566789999999999998899999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       340 ml~G~~P  346 (423)
T 4fie_A          340 MVDGEPP  346 (423)
T ss_dssp             HHHSSCT
T ss_pred             HHHCCCC
Confidence            9999999

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=4.4e-30  Score=213.60  Aligned_cols=114  Identities=14%  Similarity=0.101  Sum_probs=78.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+|||++.++.+||+|||+++.....  ........||+.|||||.+....++.++|||||||++|||+| |+.
T Consensus       180 iHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~  259 (329)
T 4aoj_A          180 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ  259 (329)
T ss_dssp             CCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCC
Confidence            99999999999999999999999999876543  222334678999999999999999999999999999999999 899


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+.+.......+   .-..+.+..++..+..+|++
T Consensus       260 Pf~~~~~~~~~~~i~~g~~---~~~p~~~~~~~~~li~~cl~  298 (329)
T 4aoj_A          260 PWYQLSNTEAIDCITQGRE---LERPRACPPEVYAIMRGCWQ  298 (329)
T ss_dssp             TTCSSCHHHHHHHHHHTCC---CCCCTTCCHHHHHHHHHHCC
T ss_pred             CCCCCCHHHHHHHHHcCCC---CCCcccccHHHHHHHHHHcC
Confidence            92  222222222222111   11234556678888888876

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=1.6e-30  Score=213.60  Aligned_cols=114  Identities=13%  Similarity=0.103  Sum_probs=86.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+|||++.++.+||+|||+++.......  ......||+.|||||.+....++.++|||||||++|||+| |+.
T Consensus       150 iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~  229 (299)
T 4asz_A          150 VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ  229 (299)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999986544311  1223468999999999999999999999999999999999 899


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+.+.......  . .-..+.+..++.++...|++
T Consensus       230 Pf~~~~~~~~~~~i~~~~--~-~~~p~~~~~~~~~li~~cl~  268 (299)
T 4asz_A          230 PWYQLSNNEVIECITQGR--V-LQRPRTCPQEVYELMLGCWQ  268 (299)
T ss_dssp             TTTTSCHHHHHHHHHHTC--C-CCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHcCC--C-CCCCccchHHHHHHHHHHcC
Confidence            92  22223332222221  1 12344566688889999986

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=2.7e-30  Score=215.03  Aligned_cols=119  Identities=20%  Similarity=0.183  Sum_probs=83.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC-cEEEcccceeeeecCCCC-----CccccccccccccccccccCCcCcccchHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKLDSS-----NRTELAGTYGYIALELTYTLKVAKKCGMHSSG  156 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~G  156 (208)
                      +|||.+  +||||||+|||++.++ .+||+|||+++.......     ......||+.|||||.+.+..++.++||||+|
T Consensus       164 ~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlG  243 (336)
T 4g3f_A          164 EYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC  243 (336)
T ss_dssp             HHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             HHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHH
Confidence            455544  9999999999999987 699999999998764311     12345799999999999998999999999999


Q ss_pred             HHHHHHHcCCCCc-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          157 LLALEVMKGKHPR-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       157 vvl~elltg~~p~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |++|||+||+.|.     ..+...+.   .+.. ...-+.+.+...+..+...|++
T Consensus       244 vilyemltG~~Pf~~~~~~~~~~~i~---~~~~-~~~~~~~~~s~~~~~li~~~L~  295 (336)
T 4g3f_A          244 CMMLHMLNGCHPWTQYFRGPLCLKIA---SEPP-PIREIPPSCAPLTAQAIQEGLR  295 (336)
T ss_dssp             HHHHHHHHSSCSSTTTCCSCCHHHHH---HSCC-GGGGSCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHCcCCCCCCCHHHHHHHHH---cCCC-CchhcCccCCHHHHHHHHHHcc
Confidence            9999999999992     11211111   1111 1122345565666666666654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.96  E-value=1.7e-30  Score=217.91  Aligned_cols=115  Identities=17%  Similarity=0.174  Sum_probs=86.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      |||||||+|||+++++.+||+|||+++.......  ......||+.|||||.+....++.++|||||||++|||+| |+.
T Consensus       207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~  286 (353)
T 4ase_A          207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  286 (353)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCC
Confidence            9999999999999999999999999987654422  2234578999999999999999999999999999999998 899


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+.+...+.++.  .....+....++.++...|++
T Consensus       287 Pf~~~~~~~~~~~~i~~g~--~~~~p~~~~~~~~~li~~c~~  326 (353)
T 4ase_A          287 PYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWH  326 (353)
T ss_dssp             SSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHcCC--CCCCCccCCHHHHHHHHHHcC
Confidence            82  222223333332221  111233455677888888876

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.96  E-value=2.1e-29  Score=205.96  Aligned_cols=119  Identities=18%  Similarity=0.159  Sum_probs=87.4

Q ss_pred             HHHhhhh----hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           84 EKLLRQE----ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        84 ~~~Lh~~----iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      .+|||.+    +||||||+|||++. ++.+||+|||+++....  .......||+.|||||.+. ++++.++|||||||+
T Consensus       142 L~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~--~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvi  218 (290)
T 3fpq_A          142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMC  218 (290)
T ss_dssp             HHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT--TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHH
T ss_pred             HHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC--CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHH
Confidence            3466643    99999999999985 79999999999975432  2334568999999999876 569999999999999


Q ss_pred             HHHHHcCCCCc---ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          159 ALEVMKGKHPR---HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       159 l~elltg~~p~---~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|||+||+.|.   ....+.........  .....++....++..+...|++
T Consensus       219 lyelltg~~Pf~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~li~~~L~  268 (290)
T 3fpq_A          219 MLEMATSEYPYSECQNAAQIYRRVTSGV--KPASFDKVAIPEVKEIIEGCIR  268 (290)
T ss_dssp             HHHHHHSSCTTTTCSSHHHHHHHHTTTC--CCGGGGGCCCHHHHHHHHHHSC
T ss_pred             HHHHHHCCCCCCCCCcHHHHHHHHHcCC--CCCCCCccCCHHHHHHHHHHcc
Confidence            99999999992   23333333333222  2333455555567777777875

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.95  E-value=2.8e-29  Score=206.54  Aligned_cols=78  Identities=21%  Similarity=0.165  Sum_probs=63.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC----CccccccccccccccccccC------CcCcccchHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS----NRTELAGTYGYIALELTYTL------KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~  160 (208)
                      +||||||+|||+|.++.+||+|||+++.......    ......||+.|||||++...      .++.++|||||||++|
T Consensus       130 iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~  209 (303)
T 3hmm_A          130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  209 (303)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred             eeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHH
Confidence            8999999999999999999999999988765421    22345799999999998643      4678999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+||+.|
T Consensus       210 El~tg~~~  217 (303)
T 3hmm_A          210 EIARRCSI  217 (303)
T ss_dssp             HHHHTBCB
T ss_pred             HHHHCCCC
Confidence            99999765

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=6.1e-29  Score=201.76  Aligned_cols=119  Identities=17%  Similarity=0.156  Sum_probs=78.8

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~  160 (208)
                      .+|+|++  +||||||+|||++.++.+||+|||+++...... ......||+.|||||.+....+ +.++||||+||++|
T Consensus       125 l~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily  203 (275)
T 3hyh_A          125 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILY  203 (275)
T ss_dssp             HHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHH
T ss_pred             HHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHH
Confidence            3455655  999999999999999999999999998765432 2234689999999999987765 58999999999999


Q ss_pred             HHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||+||+.|  ..+..+..+.......    .+++.+...+..+-..|++
T Consensus       204 ~lltg~~PF~~~~~~~~~~~i~~~~~----~~p~~~s~~~~~li~~~L~  248 (275)
T 3hyh_A          204 VMLCRRLPFDDESIPVLFKNISNGVY----TLPKFLSPGAAGLIKRMLI  248 (275)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCC----CCCTTSCHHHHHHHHHHSC
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHcCCC----CCCCCCCHHHHHHHHHHcc
Confidence            99999999  3344444433332221    1234455566666666654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.94  E-value=3.4e-27  Score=210.91  Aligned_cols=82  Identities=23%  Similarity=0.324  Sum_probs=71.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +|||.+  +||||||+|||+|.++.+||+|||+++......  ....+||+.|||||.+.. ..++.++|+||+||++||
T Consensus       306 ~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYE  383 (689)
T 3v5w_A          306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK  383 (689)
T ss_dssp             HHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            455554  999999999999999999999999998876442  234689999999999864 468999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       384 mLtG~~P  390 (689)
T 3v5w_A          384 LLRGHSP  390 (689)
T ss_dssp             HHHSSCT
T ss_pred             HHhCCCC
Confidence            9999999

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.93  E-value=4.7e-27  Score=197.65  Aligned_cols=85  Identities=24%  Similarity=0.262  Sum_probs=68.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCC-CcEEEcccceeeeecCCC----------------------------CCccccccc
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDS----------------------------SNRTELAGT  132 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~----------------------------~~~~~~~g~  132 (208)
                      .+|+|++  +||||||+|||++.+ +.+||+|||+++......                            .......||
T Consensus       130 l~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT  209 (361)
T 4f9c_A          130 LKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGT  209 (361)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCC
T ss_pred             HHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccC
Confidence            3455555  999999999999876 799999999998654321                            012234799


Q ss_pred             cccccccccccC-CcCcccchHHHHHHHHHHHcCCCC
Q 039937          133 YGYIALELTYTL-KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       133 ~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ++|+|||.+... .++.++||||+||+++||++|+.|
T Consensus       210 ~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P  246 (361)
T 4f9c_A          210 PGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP  246 (361)
T ss_dssp             GGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             ccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence            999999988765 578999999999999999999999

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.93  E-value=2.6e-27  Score=194.45  Aligned_cols=80  Identities=20%  Similarity=0.288  Sum_probs=61.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC------------CccccccccccccccccccCCcCccc
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS------------NRTELAGTYGYIALELTYTLKVAKKC  150 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~  150 (208)
                      +|||++  +||||||+|||++.++.+||+|||+++.......            ......||+.|||||.+....++.++
T Consensus       132 ~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~  211 (299)
T 4g31_A          132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV  211 (299)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHH
T ss_pred             HHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHH
Confidence            355554  9999999999999999999999999987654311            11335799999999999988999999


Q ss_pred             chHHHHHHHHHHHc
Q 039937          151 GMHSSGLLALEVMK  164 (208)
Q Consensus       151 Dv~S~Gvvl~ellt  164 (208)
                      ||||+||++|||++
T Consensus       212 DiwSlGvilyell~  225 (299)
T 4g31_A          212 DIFSLGLILFELLY  225 (299)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHcc
Confidence            99999999999997

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.3e-26  Score=197.25  Aligned_cols=84  Identities=24%  Similarity=0.233  Sum_probs=70.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CCCccccccccccccccccccC-CcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gv  157 (208)
                      +|||++  +||||||+|||++.++.+|++|||+++.....    ........||+.|+|||.+.+. .++.++||||+||
T Consensus       172 ~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~  251 (398)
T 4b99_A          172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGC  251 (398)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             HHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHH
Confidence            455555  99999999999999999999999999876432    2233457899999999988764 5689999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||++|+.|
T Consensus       252 il~ell~G~~p  262 (398)
T 4b99_A          252 IFGEMLARRQL  262 (398)
T ss_dssp             HHHHHHHTSCS
T ss_pred             HHHHHHHCCCC
Confidence            99999999999

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.92  E-value=1.6e-25  Score=184.53  Aligned_cols=155  Identities=26%  Similarity=0.339  Sum_probs=128.2

Q ss_pred             hHHHHHhhcCCCCCceeccCCCceEEehhhh-------------------------------------------------
Q 039937           52 NSRIDRVTNNFDDEHCIGKDGQGVVTKLRYH-------------------------------------------------   82 (208)
Q Consensus        52 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-------------------------------------------------   82 (208)
                      ++++..++++|...+.||+|+||.||+|...                                                 
T Consensus        22 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  101 (326)
T 3uim_A           22 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE  101 (326)
T ss_dssp             THHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSC
T ss_pred             HHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCc
Confidence            7799999999999999999999999999764                                                 


Q ss_pred             -----------------------------------------hHHHhhhh-----hhcCcCCCceeeCCCCcEEEccccee
Q 039937           83 -----------------------------------------LEKLLRQE-----ISFTTSSKNGLLDLEYEARAFDFGIA  116 (208)
Q Consensus        83 -----------------------------------------L~~~Lh~~-----iH~dlk~~nilld~~~~~kl~dfgl~  116 (208)
                                                               ..++||..     +||||||+||+++.++.+||+|||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~  181 (326)
T 3uim_A          102 RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA  181 (326)
T ss_dssp             CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSC
T ss_pred             eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccc
Confidence                                                     23456653     99999999999999999999999999


Q ss_pred             eeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC----------cccHHHHHHhhcCCCCC
Q 039937          117 KFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP----------RHFIFSICSSSSNFVIA  185 (208)
Q Consensus       117 ~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p----------~~~l~~~~~~~~~~~~~  185 (208)
                      +..... ........||+.|+|||.+....++.++||||+|++++|+++|+.|          ...+.+|+........ 
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-  260 (326)
T 3uim_A          182 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK-  260 (326)
T ss_dssp             EECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC-
T ss_pred             cccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh-
Confidence            877544 2223345689999999999888899999999999999999999999          2357778877777665 


Q ss_pred             CccccCCCCCc--------hHHHHhccccC
Q 039937          186 PHEILDPRFQP--------HHTMFGVNCYQ  207 (208)
Q Consensus       186 ~~~~~D~~l~~--------~~~~~~~~C~q  207 (208)
                      +....+..+..        .+..+...|++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  290 (326)
T 3uim_A          261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQ  290 (326)
T ss_dssp             STTSSCTTCTTSCCHHHHHHHHHHHHHHTC
T ss_pred             hhhhcChhhccccCHHHHHHHHHHHHHHhC
Confidence            77777776653        57778888875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.92  E-value=1.9e-25  Score=198.09  Aligned_cols=122  Identities=14%  Similarity=0.119  Sum_probs=88.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCC--CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLE--YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~--~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +|||.+  +||||||+|||++.+  +.+||+|||+++.+.... ......||+.|||||.+....++.++||||+||++|
T Consensus       269 ~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~-~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvily  347 (573)
T 3uto_A          269 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY  347 (573)
T ss_dssp             HHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence            355554  999999999999854  899999999999876442 234457999999999999999999999999999999


Q ss_pred             HHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|+.|  ..+..+................-+.+...+..+-..|++
T Consensus       348 eml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~  396 (573)
T 3uto_A          348 ILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLL  396 (573)
T ss_dssp             HHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSC
T ss_pred             HHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcc
Confidence            99999999  223333333333222112333334455566666666654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.92  E-value=2.4e-25  Score=183.29  Aligned_cols=155  Identities=26%  Similarity=0.274  Sum_probs=120.9

Q ss_pred             hHHHHHhhcCCCCCceeccCCCceEEehhhh-------------------------------------------------
Q 039937           52 NSRIDRVTNNFDDEHCIGKDGQGVVTKLRYH-------------------------------------------------   82 (208)
Q Consensus        52 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-------------------------------------------------   82 (208)
                      +.++..++++|...+.||+|+||.||+|.+.                                                 
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence            4466678999999999999999999999765                                                 


Q ss_pred             ----------------------------------------hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           83 ----------------------------------------LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        83 ----------------------------------------L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                                                              ..++||..  +||||||+||+++.++.+||+|||+++...
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  190 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGT  190 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence                                                    23345554  999999999999999999999999998754


Q ss_pred             CC--CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC--------cccHHHHHHhhcCCCCCCcccc
Q 039937          121 LD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP--------RHFIFSICSSSSNFVIAPHEIL  190 (208)
Q Consensus       121 ~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p--------~~~l~~~~~~~~~~~~~~~~~~  190 (208)
                      ..  ........|++.|+|||.+....++.++||||+|++++||++|+.|        ...+..|......... +...+
T Consensus       191 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  269 (321)
T 2qkw_B          191 ELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ-LEQIV  269 (321)
T ss_dssp             SSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC-CCSSS
T ss_pred             cccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc-HHHhc
Confidence            33  2223345689999999999888899999999999999999999988        2345666655554444 66666


Q ss_pred             CCCCCc--------hHHHHhccccC
Q 039937          191 DPRFQP--------HHTMFGVNCYQ  207 (208)
Q Consensus       191 D~~l~~--------~~~~~~~~C~q  207 (208)
                      ++.+..        .+..+...|++
T Consensus       270 ~~~~~~~~~~~~~~~l~~li~~~l~  294 (321)
T 2qkw_B          270 DPNLADKIRPESLRKFGDTAVKCLA  294 (321)
T ss_dssp             SSSCTTCSCHHHHHHHHHHHHHHTC
T ss_pred             ChhhccccCHHHHHHHHHHHHHHcC
Confidence            665543        45567777765

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.91  E-value=9.6e-26  Score=192.62  Aligned_cols=84  Identities=23%  Similarity=0.327  Sum_probs=70.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCC----cCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLK----VAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~S~Gv  157 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++....... ......||+.|+|||.+....    ++.++||||+||
T Consensus       182 ~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGv  261 (410)
T 3v8s_A          182 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV  261 (410)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHH
T ss_pred             HHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchH
Confidence            345544  9999999999999999999999999987654421 223567999999999987554    789999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      ++|||++|+.|
T Consensus       262 ilyell~G~~P  272 (410)
T 3v8s_A          262 FLYEMLVGDTP  272 (410)
T ss_dssp             HHHHHHHSSCT
T ss_pred             HHHHHHhCCCC
Confidence            99999999999

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.91  E-value=1.9e-25  Score=192.24  Aligned_cols=78  Identities=24%  Similarity=0.352  Sum_probs=68.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-Cccccccccccccccccc-----cCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||+|||++.++.+||+|||+++....... ......||+.|+|||.+.     ...++.++||||+||+++||++
T Consensus       197 iHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ellt  276 (437)
T 4aw2_A          197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY  276 (437)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHH
T ss_pred             EecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHh
Confidence            9999999999999999999999999987654422 223457999999999986     5678999999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       277 G~~P  280 (437)
T 4aw2_A          277 GETP  280 (437)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            9999

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.91  E-value=8.9e-25  Score=178.52  Aligned_cols=84  Identities=26%  Similarity=0.417  Sum_probs=73.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .|||..  +||||||+||+++.++.+||+|||++..............||+.|+|||.+....++.++||||+|++++||
T Consensus       130 ~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  209 (297)
T 3fxz_A          130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM  209 (297)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence            344444  999999999999999999999999998876654444556799999999999988899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       210 l~g~~p  215 (297)
T 3fxz_A          210 IEGEPP  215 (297)
T ss_dssp             HHSSCT
T ss_pred             HhCCCC
Confidence            999999

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.91  E-value=1.5e-24  Score=180.67  Aligned_cols=84  Identities=23%  Similarity=0.292  Sum_probs=72.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............||+.|+|||.+....++.++|+||+|++++||
T Consensus       119 ~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  198 (337)
T 1o6l_A          119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  198 (337)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHH
T ss_pred             HHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHH
Confidence            455554  999999999999999999999999998654433344556899999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       199 l~g~~P  204 (337)
T 1o6l_A          199 MCGRLP  204 (337)
T ss_dssp             HHSSCS
T ss_pred             hcCCCC
Confidence            999999

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.91  E-value=6.7e-25  Score=187.49  Aligned_cols=78  Identities=26%  Similarity=0.343  Sum_probs=68.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-Cccccccccccccccccc-------cCCcCcccchHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTY-------TLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||||||+|||++.++.+||+|||+++....... ......||+.|+|||.+.       ...++.++||||+||++|||
T Consensus       184 iHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyel  263 (412)
T 2vd5_A          184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM  263 (412)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHH
T ss_pred             eecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHH
Confidence            9999999999999999999999999987755422 223457999999999886       35688999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       264 ltG~~P  269 (412)
T 2vd5_A          264 FYGQTP  269 (412)
T ss_dssp             HHSSCT
T ss_pred             HhCCCC
Confidence            999999

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.90  E-value=9.6e-25  Score=185.67  Aligned_cols=85  Identities=26%  Similarity=0.295  Sum_probs=73.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+....++.++||||+||+++||
T Consensus       167 ~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyel  246 (396)
T 4dc2_A          167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM  246 (396)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHH
Confidence            344444  999999999999999999999999998644333344567899999999999988899999999999999999


Q ss_pred             HcCCCCc
Q 039937          163 MKGKHPR  169 (208)
Q Consensus       163 ltg~~p~  169 (208)
                      ++|+.|.
T Consensus       247 l~G~~Pf  253 (396)
T 4dc2_A          247 MAGRSPF  253 (396)
T ss_dssp             HHSSCSS
T ss_pred             HhCCCCC
Confidence            9999993

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.90  E-value=1.7e-24  Score=181.46  Aligned_cols=84  Identities=27%  Similarity=0.329  Sum_probs=72.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............||+.|+|||.+....++.++|+||+|++++||
T Consensus       135 ~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  214 (353)
T 2i0e_A          135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM  214 (353)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHH
Confidence            344444  999999999999999999999999998654333334456799999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       215 l~G~~P  220 (353)
T 2i0e_A          215 LAGQAP  220 (353)
T ss_dssp             HHSSCS
T ss_pred             HcCCCC
Confidence            999999

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.90  E-value=6.1e-25  Score=184.13  Aligned_cols=84  Identities=26%  Similarity=0.318  Sum_probs=67.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+....++.++||||+||++|||
T Consensus       138 ~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  217 (353)
T 3txo_A          138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM  217 (353)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHH
Confidence            344544  999999999999999999999999998644433334456799999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       218 l~G~~P  223 (353)
T 3txo_A          218 LCGHAP  223 (353)
T ss_dssp             HHSSCS
T ss_pred             HhCCCC
Confidence            999999

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.90  E-value=2.5e-24  Score=177.80  Aligned_cols=85  Identities=26%  Similarity=0.355  Sum_probs=73.7

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .++||..  +||||||+||+++.++.+||+|||++..............||+.|+|||.+....++.++||||+|++++|
T Consensus       154 L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~e  233 (321)
T 2c30_A          154 LAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIE  233 (321)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHH
Confidence            3455554  99999999999999999999999999877654333445678999999999988889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       234 l~~g~~p  240 (321)
T 2c30_A          234 MVDGEPP  240 (321)
T ss_dssp             HHHSSCT
T ss_pred             HHhCCCC
Confidence            9999999

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.90  E-value=2.2e-24  Score=182.03  Aligned_cols=119  Identities=19%  Similarity=0.153  Sum_probs=86.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+....++.++|+||+|+++|||
T Consensus       153 ~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  232 (373)
T 2r5t_A          153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM  232 (373)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHH
Confidence            455554  999999999999999999999999998644333334456899999999999988899999999999999999


Q ss_pred             HcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+.|  ..+..+.........  .  .+.+.+...+..+...|++
T Consensus       233 l~G~~Pf~~~~~~~~~~~i~~~~--~--~~~~~~~~~~~~li~~lL~  275 (373)
T 2r5t_A          233 LYGLPPFYSRNTAEMYDNILNKP--L--QLKPNITNSARHLLEGLLQ  275 (373)
T ss_dssp             HHSSCTTCCSBHHHHHHHHHHSC--C--CCCSSSCHHHHHHHHHHTC
T ss_pred             HcCCCCCCCCCHHHHHHHHHhcc--c--CCCCCCCHHHHHHHHHHcc
Confidence            999999  233333333332221  1  1234455555555555543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.90  E-value=2.9e-24  Score=193.74  Aligned_cols=118  Identities=20%  Similarity=0.191  Sum_probs=87.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+....++.++||||+|+++|||
T Consensus       456 ~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyel  535 (674)
T 3pfq_A          456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM  535 (674)
T ss_dssp             HHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHH
T ss_pred             HHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHH
Confidence            345544  999999999999999999999999998754443344567899999999999988999999999999999999


Q ss_pred             HcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhcccc
Q 039937          163 MKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCY  206 (208)
Q Consensus       163 ltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~  206 (208)
                      ++|+.|  ..+..+.....+...-    .+.+.+...+..+...|+
T Consensus       536 ltG~~Pf~~~~~~~~~~~i~~~~~----~~p~~~s~~~~~li~~lL  577 (674)
T 3pfq_A          536 LAGQAPFEGEDEDELFQSIMEHNV----AYPKSMSKEAVAICKGLM  577 (674)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHSSCC----CCCTTSCHHHHHHHHHHS
T ss_pred             HcCCCCCCCCCHHHHHHHHHhCCC----CCCccCCHHHHHHHHHHc
Confidence            999999  2333344444433221    122344445555555554

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.90  E-value=2.9e-24  Score=179.52  Aligned_cols=83  Identities=28%  Similarity=0.361  Sum_probs=71.9

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      |||..  +||||||+||+++.++.+||+|||+++.............||+.|+|||.+....++.++|+||+|++++||+
T Consensus       133 ~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  212 (345)
T 1xjd_A          133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML  212 (345)
T ss_dssp             HHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             HHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHh
Confidence            44444  9999999999999999999999999986543333345567999999999998888999999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       213 ~g~~P  217 (345)
T 1xjd_A          213 IGQSP  217 (345)
T ss_dssp             HSSCS
T ss_pred             cCCCC
Confidence            99999

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.90  E-value=6.7e-24  Score=173.22  Aligned_cols=155  Identities=25%  Similarity=0.353  Sum_probs=113.6

Q ss_pred             hHHHHHhhcCCCCC------ceeccCCCceEEehhhh-------------------------------------------
Q 039937           52 NSRIDRVTNNFDDE------HCIGKDGQGVVTKLRYH-------------------------------------------   82 (208)
Q Consensus        52 ~~~l~~~~~~f~~~------~~lg~G~~g~Vy~~~~~-------------------------------------------   82 (208)
                      +.++.+++++|+..      +.||+|+||.||+|...                                           
T Consensus        17 ~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   96 (307)
T 2nru_A           17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL   96 (307)
T ss_dssp             HHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            78999999999988      89999999999998765                                           


Q ss_pred             --------------------h----------------------------HHHhhhh--hhcCcCCCceeeCCCCcEEEcc
Q 039937           83 --------------------L----------------------------EKLLRQE--ISFTTSSKNGLLDLEYEARAFD  112 (208)
Q Consensus        83 --------------------L----------------------------~~~Lh~~--iH~dlk~~nilld~~~~~kl~d  112 (208)
                                          |                            ..+||..  +||||||+||+++.++.+||+|
T Consensus        97 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~D  176 (307)
T 2nru_A           97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISD  176 (307)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECC
T ss_pred             EEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEee
Confidence                                2                            2334443  9999999999999999999999


Q ss_pred             cceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCc------ccHHHHHHhhcCCCC
Q 039937          113 FGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR------HFIFSICSSSSNFVI  184 (208)
Q Consensus       113 fgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~------~~l~~~~~~~~~~~~  184 (208)
                      ||+++.......  ......|++.|+|||.+. +.++.++||||+|++++|+++|+.|.      ..+..+.........
T Consensus       177 fg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  255 (307)
T 2nru_A          177 FGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK  255 (307)
T ss_dssp             CTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC
T ss_pred             cccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh
Confidence            999987654321  123456899999999775 45789999999999999999999982      122333333222222


Q ss_pred             CCccccCCCCCc-------hHHHHhccccC
Q 039937          185 APHEILDPRFQP-------HHTMFGVNCYQ  207 (208)
Q Consensus       185 ~~~~~~D~~l~~-------~~~~~~~~C~q  207 (208)
                      .+.+.+++.+..       .+..+...|++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  285 (307)
T 2nru_A          256 TIEDYIDKKMNDADSTSVEAMYSVASQCLH  285 (307)
T ss_dssp             CHHHHSCSSCSCCCHHHHHHHHHHHHHHTC
T ss_pred             hhhhhccccccccchHHHHHHHHHHHHHcC
Confidence            244445554432       45566777764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.90  E-value=3.5e-24  Score=184.36  Aligned_cols=86  Identities=22%  Similarity=0.267  Sum_probs=72.6

Q ss_pred             hHHHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           83 LEKLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        83 L~~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      ..+|||. .  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+....++.++||||+|+++
T Consensus       260 aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  339 (446)
T 4ejn_A          260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM  339 (446)
T ss_dssp             HHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHH
T ss_pred             HHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHH
Confidence            3457776 3  999999999999999999999999998644433334456799999999999988999999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       340 ~ell~g~~P  348 (446)
T 4ejn_A          340 YEMMCGRLP  348 (446)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHhhCCCC
Confidence            999999999

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.89  E-value=2e-24  Score=178.59  Aligned_cols=116  Identities=21%  Similarity=0.259  Sum_probs=83.1

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      |||..  +||||||+||+++.++.+||+|||+++.......  ......++..|+|||.+....++.++||||||++++|
T Consensus       132 ~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  211 (327)
T 3poz_A          132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE  211 (327)
T ss_dssp             HHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHH
Confidence            44444  9999999999999999999999999987654321  2233456779999999998899999999999999999


Q ss_pred             HHc-CCCCc-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMK-GKHPR-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 llt-g~~p~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++| |+.|.     ..+...+.....      ....+.....+..+...|++
T Consensus       212 llt~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~  257 (327)
T 3poz_A          212 LMTFGSKPYDGIPASEISSILEKGER------LPQPPICTIDVYMIMVKCWM  257 (327)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHTTCC------CCCCTTBCHHHHHHHHHHTC
T ss_pred             HHhcCCCCccCCCHHHHHHHHHcCCC------CCCCccCCHHHHHHHHHHcC
Confidence            999 99882     233333332221      11233344567777777765

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.89  E-value=2e-24  Score=180.98  Aligned_cols=78  Identities=15%  Similarity=0.043  Sum_probs=68.7

Q ss_pred             hhcCcCCCceeeCC-----------CCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHH
Q 039937           91 ISFTTSSKNGLLDL-----------EYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL  157 (208)
Q Consensus        91 iH~dlk~~nilld~-----------~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gv  157 (208)
                      +||||||+|||++.           ++.+||+|||+++.....  ........||..|+|||.+....++.++|||||||
T Consensus       194 vHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  273 (365)
T 3e7e_A          194 IHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAA  273 (365)
T ss_dssp             ECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHH
T ss_pred             ecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHH
Confidence            99999999999998           899999999999876432  22334567899999999999888999999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||+||+.|
T Consensus       274 il~elltg~~p  284 (365)
T 3e7e_A          274 TVYCMLFGTYM  284 (365)
T ss_dssp             HHHHHHHSSCC
T ss_pred             HHHHHHhCCCc
Confidence            99999999988

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.89  E-value=1e-23  Score=181.83  Aligned_cols=84  Identities=21%  Similarity=0.244  Sum_probs=72.4

Q ss_pred             HHhhhh--hhcCcCCCceeeC---CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLD---LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld---~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||..  +||||||+||+++   .++.+||+|||+++.............||+.|+|||.+....++.++||||+|+++
T Consensus       124 ~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvil  203 (444)
T 3soa_A          124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL  203 (444)
T ss_dssp             HHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred             HHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHH
Confidence            345544  9999999999998   46789999999998776554444556799999999999888899999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      ++|++|+.|
T Consensus       204 yell~G~~P  212 (444)
T 3soa_A          204 YILLVGYPP  212 (444)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.89  E-value=9.7e-24  Score=173.45  Aligned_cols=115  Identities=17%  Similarity=0.217  Sum_probs=73.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCcc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRH  170 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~  170 (208)
                      +||||||+||+++.++.+||+|||+++.............||+.|+|||.+....++.++||||+|++++|+++|+.|..
T Consensus       161 vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~  240 (309)
T 3p86_A          161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG  240 (309)
T ss_dssp             CCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred             ECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            89999999999999999999999999865544333345678999999999998888999999999999999999999922


Q ss_pred             --cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          171 --FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       171 --~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        ...+.........  ....+.+.+...+..+...|++
T Consensus       241 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  277 (309)
T 3p86_A          241 NLNPAQVVAAVGFKC--KRLEIPRNLNPQVAAIIEGCWT  277 (309)
T ss_dssp             TSCHHHHHHHHHHSC--CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHhcC--CCCCCCccCCHHHHHHHHHHcc
Confidence              2222222221111  1122234455566667666764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.89  E-value=5.7e-24  Score=173.39  Aligned_cols=122  Identities=17%  Similarity=0.178  Sum_probs=82.0

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++|..  +||||||+||+++.++.+||+|||+++..... ........||+.|+|||.+....++.++||||+|++++|+
T Consensus       126 ~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  205 (294)
T 4eqm_A          126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM  205 (294)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHH
Confidence            44444  99999999999999999999999998765433 2223345689999999999888889999999999999999


Q ss_pred             HcCCCCc--ccHHHHHHhhcCCCC-CCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHPR--HFIFSICSSSSNFVI-APHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p~--~~l~~~~~~~~~~~~-~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+.|.  ............+.. .....+.+.+...+..+...|++
T Consensus       206 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  253 (294)
T 4eqm_A          206 LVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATE  253 (294)
T ss_dssp             HHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSC
T ss_pred             HhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhc
Confidence            9999992  222232223332221 12223345555666666666654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.89  E-value=6.6e-24  Score=174.30  Aligned_cols=118  Identities=16%  Similarity=0.051  Sum_probs=81.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||++....... ......||+.|+|||.+.. .++.++||||||++++|+
T Consensus       171 ~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el  248 (311)
T 3p1a_A          171 AHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEV  248 (311)
T ss_dssp             HHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHH
Confidence            344444  999999999999999999999999988765432 2234568999999998764 789999999999999999


Q ss_pred             HcCCCCcccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|..|...-..|..  +.... ....+.+.+...+..+...|++
T Consensus       249 ~~g~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~l~~li~~~L~  290 (311)
T 3p1a_A          249 ACNMELPHGGEGWQQ--LRQGY-LPPEFTAGLSSELRSVLVMMLE  290 (311)
T ss_dssp             HHTCCCCSSHHHHHH--HTTTC-CCHHHHTTSCHHHHHHHHHHSC
T ss_pred             HhCCCCCCCccHHHH--HhccC-CCcccccCCCHHHHHHHHHHcC
Confidence            999776332222221  11221 2233344555566666666654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.89  E-value=7.9e-24  Score=176.75  Aligned_cols=84  Identities=26%  Similarity=0.311  Sum_probs=72.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............||+.|+|||.+....++.++|+||+||+++||
T Consensus       124 ~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  203 (345)
T 3a8x_A          124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM  203 (345)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHH
Confidence            344444  999999999999999999999999998644333334456899999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       204 l~g~~p  209 (345)
T 3a8x_A          204 MAGRSP  209 (345)
T ss_dssp             HHSSCT
T ss_pred             HhCCCC
Confidence            999999

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.89  E-value=2.7e-24  Score=180.26  Aligned_cols=78  Identities=14%  Similarity=0.246  Sum_probs=68.2

Q ss_pred             hhcCcCCCceeeC--CCCcEEEcccceeeeecCCC-------CCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLD--LEYEARAFDFGIAKFFKLDS-------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        91 iH~dlk~~nilld--~~~~~kl~dfgl~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +||||||+|||++  .++.+||+|||+++......       .......||+.|+|||.+....++.++||||||++++|
T Consensus       174 iHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~e  253 (364)
T 3op5_A          174 VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ  253 (364)
T ss_dssp             ECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             EEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHH
Confidence            9999999999999  88999999999998765431       11133458999999999998889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |+||+.|
T Consensus       254 l~~g~~P  260 (364)
T 3op5_A          254 WLTGHLP  260 (364)
T ss_dssp             HHHSCCT
T ss_pred             HHhCCCC
Confidence            9999999

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.89  E-value=1.2e-23  Score=173.74  Aligned_cols=84  Identities=24%  Similarity=0.317  Sum_probs=68.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.....  ........++..|+|||.+....++.++||||+|++++
T Consensus       129 ~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  208 (325)
T 3kex_A          129 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVW  208 (325)
T ss_dssp             HHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHH
Confidence            344444  99999999999999999999999999876543  22234456778999999998888999999999999999


Q ss_pred             HHHc-CCCC
Q 039937          161 EVMK-GKHP  168 (208)
Q Consensus       161 ellt-g~~p  168 (208)
                      |++| |+.|
T Consensus       209 el~~~g~~p  217 (325)
T 3kex_A          209 ELMTFGAEP  217 (325)
T ss_dssp             HHHTTSCCT
T ss_pred             HHHhCCCCC
Confidence            9999 9998

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.89  E-value=2.2e-23  Score=183.60  Aligned_cols=78  Identities=26%  Similarity=0.305  Sum_probs=70.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++.............||+.|+|||.+....++.++||||+||++|||++|+.|
T Consensus       311 vHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~P  388 (543)
T 3c4z_A          311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP  388 (543)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCC
Confidence            999999999999999999999999999876554334456899999999999988899999999999999999999999

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.89  E-value=9.7e-24  Score=173.10  Aligned_cols=122  Identities=17%  Similarity=0.204  Sum_probs=78.6

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC---CCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      |||..  +||||||+||+++.++.+||+|||+++......   .......|++.|+|||.+....++.++||||+|++++
T Consensus       131 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~  210 (311)
T 3ork_A          131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY  210 (311)
T ss_dssp             HHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHH
Confidence            44444  999999999999999999999999998765431   1223456899999999998888999999999999999


Q ss_pred             HHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|+.|  .....+.................+.+...+..+...|++
T Consensus       211 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  259 (311)
T 3ork_A          211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA  259 (311)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTC
T ss_pred             HHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHh
Confidence            99999999  222223322222222112222233445556666666654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.88  E-value=2e-23  Score=172.74  Aligned_cols=83  Identities=24%  Similarity=0.310  Sum_probs=66.7

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||..  +||||||+||+++.++.+||+|||+++.............||+.|+|||.+....++.++||||+|++++||+
T Consensus       136 ~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~  215 (327)
T 3a62_A          136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML  215 (327)
T ss_dssp             HHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHH
T ss_pred             HHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHH
Confidence            44444  9999999999999999999999999876544333334557899999999998888899999999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      +|+.|
T Consensus       216 ~g~~p  220 (327)
T 3a62_A          216 TGAPP  220 (327)
T ss_dssp             HSSCS
T ss_pred             HCCCC
Confidence            99999

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.88  E-value=3.6e-23  Score=168.03  Aligned_cols=84  Identities=18%  Similarity=0.240  Sum_probs=71.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCC-cCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK-VAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~e  161 (208)
                      ++||..  +||||||+||+++.++.+||+|||+++.............+|+.|+|||.+.... ++.++||||+|++++|
T Consensus       115 ~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  194 (292)
T 3o0g_A          115 GFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE  194 (292)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred             HHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHH
Confidence            455554  9999999999999999999999999988765444444567899999999987655 7999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|..|
T Consensus       195 l~~~~~p  201 (292)
T 3o0g_A          195 LANAGRP  201 (292)
T ss_dssp             HTTTSCC
T ss_pred             HHHcCCC
Confidence            9998888

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.88  E-value=3.2e-23  Score=171.26  Aligned_cols=81  Identities=32%  Similarity=0.369  Sum_probs=70.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++||..  +||||||+||+++.++.+||+|||+++.....   .....||+.|+|||.+....++.++|+||+|++++||
T Consensus       120 ~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  196 (318)
T 1fot_A          120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM  196 (318)
T ss_dssp             HHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred             HHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHH
Confidence            344444  99999999999999999999999999876533   2345789999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       197 l~g~~p  202 (318)
T 1fot_A          197 LAGYTP  202 (318)
T ss_dssp             HHSSCT
T ss_pred             HhCCCC
Confidence            999999

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.88  E-value=4.1e-23  Score=174.91  Aligned_cols=83  Identities=28%  Similarity=0.371  Sum_probs=70.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc---CCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT---LKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||..  +||||||+||+++.++.+||+|||+++...... ......||+.|+|||.+..   ..++.++||||+||++
T Consensus       129 ~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il  207 (384)
T 4fr4_A          129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA  207 (384)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHH
T ss_pred             HHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-ceeccCCCccccCCeeeccCCCCCCCccceeechHHHH
Confidence            455544  999999999999999999999999998765432 2345679999999999863   3578999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      |||++|+.|
T Consensus       208 ~elltG~~P  216 (384)
T 4fr4_A          208 YELLRGRRP  216 (384)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.88  E-value=4.3e-23  Score=168.04  Aligned_cols=120  Identities=17%  Similarity=0.148  Sum_probs=85.2

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCC---cCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK---VAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~S~Gvvl~  160 (208)
                      +||..  +||||||+||+++.++.+||+|||+++.............||+.|+|||.+....   .+.++||||+|++++
T Consensus       152 ~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~  231 (298)
T 2zv2_A          152 YLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY  231 (298)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH
T ss_pred             HHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH
Confidence            44443  9999999999999999999999999987765433334567899999999887554   367899999999999


Q ss_pred             HHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|+.|  ......+........  ......+.+...+..+...|++
T Consensus       232 ~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  278 (298)
T 2zv2_A          232 CFVFGQCPFMDERIMCLHSKIKSQA--LEFPDQPDIAEDLKDLITRMLD  278 (298)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCC--CCCCSSSCCCHHHHHHHHHHTC
T ss_pred             HHHHCCCCCCCccHHHHHHHHhccc--CCCCCccccCHHHHHHHHHHhh
Confidence            99999999  223333322222211  1111234555667777777764

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.88  E-value=3.7e-23  Score=173.05  Aligned_cols=81  Identities=27%  Similarity=0.256  Sum_probs=71.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++||..  +||||||+||+++.++.+||+|||+++.....   .....||+.|+|||.+....++.++||||+|++++||
T Consensus       155 ~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  231 (350)
T 1rdq_E          155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM  231 (350)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHH
Confidence            344444  99999999999999999999999999876543   2345789999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       232 l~g~~P  237 (350)
T 1rdq_E          232 AAGYPP  237 (350)
T ss_dssp             HHSSCS
T ss_pred             hhCCCC
Confidence            999999

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.88  E-value=2.7e-23  Score=172.42  Aligned_cols=83  Identities=23%  Similarity=0.345  Sum_probs=70.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcC-cccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVA-KKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~e  161 (208)
                      +|||..  +||||||+||+++.++.+||+|||++....... ......||+.|+|||.+....+. .++||||+|++++|
T Consensus       128 ~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  206 (328)
T 3fe3_A          128 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT  206 (328)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHH
Confidence            344444  999999999999999999999999987654432 23456789999999999877664 78999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       207 ll~g~~p  213 (328)
T 3fe3_A          207 LVSGSLP  213 (328)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999999

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.88  E-value=1.4e-23  Score=170.66  Aligned_cols=83  Identities=22%  Similarity=0.202  Sum_probs=68.5

Q ss_pred             hHHHhh--------hh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC----CccccccccccccccccccC----
Q 039937           83 LEKLLR--------QE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS----NRTELAGTYGYIALELTYTL----  144 (208)
Q Consensus        83 L~~~Lh--------~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~----  144 (208)
                      ...|||        ..  +||||||+||+++.++.+||+|||+++.......    ......||+.|+|||.+...    
T Consensus       117 ~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  196 (301)
T 3q4u_A          117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVD  196 (301)
T ss_dssp             HHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTT
T ss_pred             HHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCC
Confidence            346777        44  9999999999999999999999999987654422    12334789999999998765    


Q ss_pred             --CcCcccchHHHHHHHHHHHcC
Q 039937          145 --KVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus       145 --~~~~~~Dv~S~Gvvl~elltg  165 (208)
                        .++.++||||||++++||+||
T Consensus       197 ~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          197 CFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccCCchhhHHHHHHHHHHHHhh
Confidence              455799999999999999999

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.88  E-value=2.8e-23  Score=171.87  Aligned_cols=84  Identities=20%  Similarity=0.303  Sum_probs=63.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.....  ........++..|+|||.+....++.++||||+|++++
T Consensus       131 ~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  210 (327)
T 3lzb_A          131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW  210 (327)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHH
Confidence            344444  99999999999999999999999999876543  11223345677899999999888999999999999999


Q ss_pred             HHHc-CCCC
Q 039937          161 EVMK-GKHP  168 (208)
Q Consensus       161 ellt-g~~p  168 (208)
                      |+++ |+.|
T Consensus       211 ell~~g~~p  219 (327)
T 3lzb_A          211 ELMTFGSKP  219 (327)
T ss_dssp             HHHTTSCCT
T ss_pred             HHHHCCCCC
Confidence            9999 9988

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.88  E-value=3.4e-23  Score=173.05  Aligned_cols=78  Identities=18%  Similarity=0.179  Sum_probs=68.6

Q ss_pred             hhcCcCCCceeeCCCCc---EEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYE---ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~---~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.   +||+|||+++.............||+.|+|||.+....++.++||||+|++++||++|+.
T Consensus       152 vHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  231 (351)
T 3c0i_A          152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL  231 (351)
T ss_dssp             ECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCC
Confidence            99999999999986554   999999999887654333445678999999999988889999999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       232 p  232 (351)
T 3c0i_A          232 P  232 (351)
T ss_dssp             S
T ss_pred             C
Confidence            9

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.88  E-value=5.3e-23  Score=166.93  Aligned_cols=120  Identities=18%  Similarity=0.194  Sum_probs=75.6

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccc---cCCcCcccchHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLL  158 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvv  158 (208)
                      +||..  +||||||+||+++.++.+||+|||++......  ........|++.|+|||.+.   ...++.++||||+|++
T Consensus       135 ~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  214 (289)
T 3og7_A          135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV  214 (289)
T ss_dssp             HHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHH
T ss_pred             HHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHH
Confidence            44444  99999999999999999999999999765432  22233456899999999886   5667889999999999


Q ss_pred             HHHHHcCCCCcc------cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          159 ALEVMKGKHPRH------FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       159 l~elltg~~p~~------~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+++|+.|..      .+...+.......  ....+...+...+..+...|++
T Consensus       215 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  267 (289)
T 3og7_A          215 LYELMTGQLPYSNINNRDQIIEMVGRGSLSP--DLSKVRSNCPKRMKRLMAECLK  267 (289)
T ss_dssp             HHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC--CTTSSCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHCCCCccccchHHHHHHHhcccccCc--chhhccccCCHHHHHHHHHHcc
Confidence            999999999921      1222222221111  1122334455567777777764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.88  E-value=4.4e-23  Score=173.89  Aligned_cols=114  Identities=15%  Similarity=0.152  Sum_probs=70.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||||+||+++.++.+||+|||+++.......   ......++..|+|||.+....++.++||||||++++|+++ |+
T Consensus       169 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~  248 (373)
T 2qol_A          169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE  248 (373)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-
T ss_pred             eCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999987654321   1112234678999999988889999999999999999998 99


Q ss_pred             CCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          167 HPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|.  ....+...... ..  ............+..+...|++
T Consensus       249 ~P~~~~~~~~~~~~i~-~~--~~~~~~~~~~~~l~~li~~cl~  288 (373)
T 2qol_A          249 RPYWEMSNQDVIKAVD-EG--YRLPPPMDCPAALYQLMLDCWQ  288 (373)
T ss_dssp             CTTTTCCHHHHHHHHH-TT--EECCCCTTCBHHHHHHHHHHTC
T ss_pred             CCCCCCCHHHHHHHHH-cC--CCCCCCccccHHHHHHHHHHhC
Confidence            982  12222222211 11  1111233444566777777765

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.88  E-value=3.4e-23  Score=172.27  Aligned_cols=77  Identities=25%  Similarity=0.328  Sum_probs=60.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--Ccccccccccccccccccc-----------CCcCcccchHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYT-----------LKVAKKCGMHSSGL  157 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv  157 (208)
                      +||||||+|||++ ++.+||+|||+++.......  ......||+.|+|||.+..           ..++.++||||+|+
T Consensus       130 iHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~  208 (343)
T 3dbq_A          130 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  208 (343)
T ss_dssp             CCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHH
T ss_pred             ecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHH
Confidence            9999999999997 57899999999987654421  2234578999999998854           66789999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||++|+.|
T Consensus       209 il~ell~g~~p  219 (343)
T 3dbq_A          209 ILYYMTYGKTP  219 (343)
T ss_dssp             HHHHHHHSSCT
T ss_pred             HHHHHHhCCCc
Confidence            99999999999

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.88  E-value=9.2e-23  Score=171.68  Aligned_cols=111  Identities=17%  Similarity=0.214  Sum_probs=81.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++......  .......+++.|+|||.+....++.++||||||+++|||++ |+.
T Consensus       225 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~  304 (370)
T 2psq_A          225 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS  304 (370)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999998765432  12233456788999999988889999999999999999999 888


Q ss_pred             Cc-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.     ..+...+....      .......+...+..+...|++
T Consensus       305 p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~  343 (370)
T 2psq_A          305 PYPGIPVEELFKLLKEGH------RMDKPANCTNELYMMMRDCWH  343 (370)
T ss_dssp             SSTTCCGGGHHHHHHTTC------CCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHhcCC------CCCCCCCCCHHHHHHHHHHcC
Confidence            81     22333222221      112234455567777777765

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.88  E-value=2.8e-23  Score=175.14  Aligned_cols=119  Identities=13%  Similarity=0.045  Sum_probs=82.2

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      |||..  +||||||+||+++.++.+||+|||+++......  .......++..|+|||.+....++.++||||||++++|
T Consensus       228 ~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~e  307 (377)
T 3cbl_A          228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE  307 (377)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             HHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHH
Confidence            44443  999999999999999999999999998754331  11112235678999999988889999999999999999


Q ss_pred             HHc-CCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMK-GKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 llt-g~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++| |+.|..  ...+ +...+...  ............+..+...|++
T Consensus       308 l~t~g~~p~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~  353 (377)
T 3cbl_A          308 TFSLGASPYPNLSNQQ-TREFVEKG--GRLPCPELCPDAVFRLMEQCWA  353 (377)
T ss_dssp             HHTTSCCSSTTSCHHH-HHHHHHTT--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             HHhCCCCCCCCCCHHH-HHHHHHcC--CCCCCCCCCCHHHHHHHHHHcC
Confidence            998 888822  1111 11222121  1111233445567777777765

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.88  E-value=2.8e-23  Score=171.74  Aligned_cols=114  Identities=17%  Similarity=0.170  Sum_probs=79.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||||+||+++.++.+||+|||+++.......   ......+|+.|+|||.+....++.++||||+|++++|+++ |+
T Consensus       173 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~  252 (325)
T 3kul_A          173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE  252 (325)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             eCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999987754421   1122345678999999988889999999999999999999 99


Q ss_pred             CCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          167 HPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|.  ....+........   ........+...+..+...|++
T Consensus       253 ~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~  292 (325)
T 3kul_A          253 RPYWNMTNRDVISSVEEG---YRLPAPMGCPHALHQLMLDCWH  292 (325)
T ss_dssp             CTTTTSCHHHHHHHHHTT---CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCcccCCHHHHHHHHHcC---CCCCCCCCcCHHHHHHHHHHcc
Confidence            982  2222222222221   1122234555567777777765

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=3.1e-23  Score=171.38  Aligned_cols=83  Identities=23%  Similarity=0.269  Sum_probs=70.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCC--CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDL--EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~--~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .|||..  +||||||+||+++.  ++.+|++|||+++...... ......+++.|+|||.+....++.++||||+|++++
T Consensus       116 ~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  194 (321)
T 1tki_A          116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY  194 (321)
T ss_dssp             HHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHH
Confidence            344444  99999999999987  7899999999998775432 223456899999999998888899999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       195 ~ll~g~~p  202 (321)
T 1tki_A          195 VLLSGINP  202 (321)
T ss_dssp             HHHHSSCT
T ss_pred             HHHhCCCC
Confidence            99999999

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.88  E-value=7.1e-24  Score=173.58  Aligned_cols=83  Identities=20%  Similarity=0.270  Sum_probs=68.9

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC--------------ccccccccccccccccccCCcCcc
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN--------------RTELAGTYGYIALELTYTLKVAKK  149 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~--------------~~~~~g~~~y~aPE~~~~~~~~~~  149 (208)
                      +||+.  +||||||+||+++.++.+||+|||+++........              .....||+.|+|||.+....++.+
T Consensus       123 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  202 (310)
T 3s95_A          123 YLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK  202 (310)
T ss_dssp             HHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTH
T ss_pred             HHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcH
Confidence            44444  99999999999999999999999999876543111              114578999999999998889999


Q ss_pred             cchHHHHHHHHHHHcCCCC
Q 039937          150 CGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       150 ~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||++++|+++|..|
T Consensus       203 ~Di~slG~~l~el~~g~~~  221 (310)
T 3s95_A          203 VDVFSFGIVLCEIIGRVNA  221 (310)
T ss_dssp             HHHHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999987

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.87  E-value=4e-23  Score=167.33  Aligned_cols=83  Identities=19%  Similarity=0.316  Sum_probs=71.0

Q ss_pred             Hhhhh--hhcCcCCCceee---CCCCcEEEcccceeeeecCCCC-------CccccccccccccccccccCCcCcccchH
Q 039937           86 LLRQE--ISFTTSSKNGLL---DLEYEARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYTLKVAKKCGMH  153 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nill---d~~~~~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~  153 (208)
                      +||..  +||||||+||++   +.++.+||+|||+++.......       ......|++.|+|||.+....++.++|||
T Consensus       120 ~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  199 (296)
T 4hgt_A          120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  199 (296)
T ss_dssp             HHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHH
T ss_pred             HHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHH
Confidence            44444  999999999999   7899999999999987765421       22345789999999999988899999999


Q ss_pred             HHHHHHHHHHcCCCC
Q 039937          154 SSGLLALEVMKGKHP  168 (208)
Q Consensus       154 S~Gvvl~elltg~~p  168 (208)
                      |+|++++|+++|+.|
T Consensus       200 slG~il~~l~~g~~p  214 (296)
T 4hgt_A          200 SLGYVLMYFNLGSLP  214 (296)
T ss_dssp             HHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHhcCCCC
Confidence            999999999999999

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.87  E-value=5.7e-23  Score=172.54  Aligned_cols=83  Identities=20%  Similarity=0.269  Sum_probs=69.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCC---CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLE---YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~---~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||..  +||||||+||+++.+   +.+||+|||++....... ......||+.|+|||.+....++.++||||+|+++
T Consensus       142 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  220 (362)
T 2bdw_A          142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL  220 (362)
T ss_dssp             HHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             HHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHH
Confidence            345544  999999999999865   459999999998765432 22345789999999999888899999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      |||++|+.|
T Consensus       221 ~~ll~g~~P  229 (362)
T 2bdw_A          221 YILLVGYPP  229 (362)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHHCCCC
Confidence            999999999

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=7.2e-23  Score=171.29  Aligned_cols=78  Identities=28%  Similarity=0.362  Sum_probs=65.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCcccccccccccccccccc--CCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYT--LKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.+||+|||+++..... ........||+.|+|||.+..  ..++.++||||||++++||++|+.
T Consensus       181 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~  260 (355)
T 1vzo_A          181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS  260 (355)
T ss_dssp             CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            99999999999999999999999999876433 222334578999999999874  346789999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       261 p  261 (355)
T 1vzo_A          261 P  261 (355)
T ss_dssp             T
T ss_pred             C
Confidence            9

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.87  E-value=5.7e-23  Score=171.68  Aligned_cols=116  Identities=20%  Similarity=0.177  Sum_probs=83.2

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +||..  +||||||+||+++.++.+||+|||+++.....    ....||+.|+|||.+.   ...++.++||||||++++
T Consensus       169 ~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  244 (348)
T 1u5q_A          169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  244 (348)
T ss_dssp             HHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHH
T ss_pred             HHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHH
Confidence            44444  99999999999999999999999998765432    2356899999999874   567889999999999999


Q ss_pred             HHHcCCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|+.|.  ......+.......  ............+..+...|++
T Consensus       245 ell~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  291 (348)
T 1u5q_A          245 ELAERKPPLFNMNAMSALYHIAQNE--SPALQSGHWSEYFRNFVDSCLQ  291 (348)
T ss_dssp             HHHHSSCTTTTSCHHHHHHHHHHSC--CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             HHHhCCCCCCCCChHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHHcc
Confidence            999999992  22222222222222  2222234445566667777765

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.87  E-value=9.6e-23  Score=171.29  Aligned_cols=83  Identities=20%  Similarity=0.308  Sum_probs=70.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC----cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY----EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~----~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      +|||..  +||||||+||+++.++    .+||+|||+++...... ......||+.|+|||.+....++.++||||+|++
T Consensus       129 ~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi  207 (361)
T 2yab_A          129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI  207 (361)
T ss_dssp             HHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             HHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHH
Confidence            344444  9999999999998776    79999999998876542 2234578999999999988889999999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      +|+|++|+.|
T Consensus       208 l~~ll~g~~P  217 (361)
T 2yab_A          208 TYILLSGASP  217 (361)
T ss_dssp             HHHHHHSCCS
T ss_pred             HHHHHhCCCC
Confidence            9999999999

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.87  E-value=4.2e-23  Score=170.63  Aligned_cols=84  Identities=25%  Similarity=0.364  Sum_probs=70.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCc-CcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl  159 (208)
                      ++||..  +||||||+||+++.++.+||+|||+++.....  ........||+.|+|||.+....+ +.++||||+|+++
T Consensus       119 ~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  198 (323)
T 3tki_A          119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL  198 (323)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHH
T ss_pred             HHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHH
Confidence            455554  99999999999999999999999999876433  222345678999999999877665 7889999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       199 ~~ll~g~~p  207 (323)
T 3tki_A          199 TAMLAGELP  207 (323)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.87  E-value=5e-23  Score=169.14  Aligned_cols=84  Identities=21%  Similarity=0.231  Sum_probs=70.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.............+|+.|+|||.+.. ..++.++||||+|++++|
T Consensus       133 ~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  212 (311)
T 3niz_A          133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE  212 (311)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHH
Confidence            345544  99999999999999999999999999887654334445578999999998865 567899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       213 ll~g~~p  219 (311)
T 3niz_A          213 MITGKPL  219 (311)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999988

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.87  E-value=1.1e-22  Score=166.35  Aligned_cols=77  Identities=22%  Similarity=0.226  Sum_probs=68.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++...... ......+|+.|+|||.+....++.++||||+|++++||++|+.|
T Consensus       142 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p  218 (308)
T 3g33_A          142 VHRDLKPENILVTSGGTVKLADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL  218 (308)
T ss_dssp             CCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCS
T ss_pred             ccCCCCHHHEEEcCCCCEEEeeCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987654332 23456789999999999888899999999999999999999999

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.87  E-value=1.7e-22  Score=168.76  Aligned_cols=83  Identities=22%  Similarity=0.315  Sum_probs=61.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCC---CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDL---EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~---~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      ++||..  +||||||+||+++.   ++.+||+|||+++...... ......||+.|+|||.+....++.++||||||+++
T Consensus       162 ~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  240 (349)
T 2w4o_A          162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT  240 (349)
T ss_dssp             HHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             HHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHH
Confidence            344444  99999999999975   8999999999998764332 22345689999999999888899999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       241 ~ell~g~~p  249 (349)
T 2w4o_A          241 YILLCGFEP  249 (349)
T ss_dssp             HHHHHSSCT
T ss_pred             HHHHhCCCC
Confidence            999999999

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.87  E-value=1.2e-22  Score=167.76  Aligned_cols=84  Identities=15%  Similarity=0.190  Sum_probs=64.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.............+|..|+|||.+.. ..++.++||||+|++++|
T Consensus       114 ~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  193 (324)
T 3mtl_A          114 AYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYE  193 (324)
T ss_dssp             HHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHH
Confidence            344444  99999999999999999999999999876544333344578999999998875 567899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       194 l~~g~~p  200 (324)
T 3mtl_A          194 MATGRPL  200 (324)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999998

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.87  E-value=4.1e-23  Score=178.18  Aligned_cols=114  Identities=16%  Similarity=0.139  Sum_probs=81.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+|||++.++.+||+|||+++..... ........++..|+|||.+....++.++||||||++++||+| |+.|
T Consensus       306 vHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P  385 (454)
T 1qcf_A          306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP  385 (454)
T ss_dssp             CCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999865432 111123345778999999988889999999999999999999 9988


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ....+.........   .......+...+..+...|++
T Consensus       386 ~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~cl~  423 (454)
T 1qcf_A          386 YPGMSNPEVIRALERGY---RMPRPENCPEELYNIMMRCWK  423 (454)
T ss_dssp             STTCCHHHHHHHHHHTC---CCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHcc
Confidence            2  22222222221111   111233455567777777765

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.87  E-value=7.9e-23  Score=173.28  Aligned_cols=114  Identities=18%  Similarity=0.140  Sum_probs=76.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCcccccccccccccccccc-----------CCcCcccchHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYT-----------LKVAKKCGMHSSGL  157 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv  157 (208)
                      +||||||+|||++ ++.+||+|||+++......  .......||+.|+|||.+..           ..++.++|||||||
T Consensus       177 vHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGv  255 (390)
T 2zmd_A          177 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  255 (390)
T ss_dssp             CCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHH
T ss_pred             eecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHH
Confidence            9999999999996 5789999999998765432  12234579999999998864           36789999999999


Q ss_pred             HHHHHHcCCCCcc---cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          158 LALEVMKGKHPRH---FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       158 vl~elltg~~p~~---~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|||++|+.|..   .....+.......  .....+......+..+...|++
T Consensus       256 il~ell~G~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~  306 (390)
T 2zmd_A          256 ILYYMTYGKTPFQQIINQISKLHAIIDPN--HEIEFPDIPEKDLQDVLKCCLK  306 (390)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHCTT--SCCCCCCCSCHHHHHHHHHHTC
T ss_pred             HHHHHHHCCCcchhhhHHHHHHHHHhCcc--ccCCCCccchHHHHHHHHHHcc
Confidence            9999999999932   2222233332222  1111222333456667777764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.87  E-value=3.9e-23  Score=174.58  Aligned_cols=84  Identities=27%  Similarity=0.273  Sum_probs=68.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC---------------------CCCcccccccccccccccc
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---------------------SSNRTELAGTYGYIALELT  141 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---------------------~~~~~~~~g~~~y~aPE~~  141 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++.....                     ........||+.|+|||.+
T Consensus       123 ~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  202 (388)
T 3oz6_A          123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEIL  202 (388)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHH
T ss_pred             HHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHh
Confidence            445544  99999999999999999999999999875431                     1112345789999999988


Q ss_pred             cc-CCcCcccchHHHHHHHHHHHcCCCC
Q 039937          142 YT-LKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       142 ~~-~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      .. ..++.++||||+||+++||++|+.|
T Consensus       203 ~~~~~~~~~~DiwSlG~il~ell~g~~p  230 (388)
T 3oz6_A          203 LGSTKYTKGIDMWSLGCILGEILCGKPI  230 (388)
T ss_dssp             TTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCCCCChhhHHHHHHHHHHHHhCCCC
Confidence            75 6789999999999999999999998

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.87  E-value=1.5e-22  Score=171.66  Aligned_cols=122  Identities=17%  Similarity=0.146  Sum_probs=84.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCC--CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDL--EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~--~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ++||..  +||||||+||+++.  .+.+||+|||+++...... ......||+.|+|||.+....++.++||||+|++++
T Consensus       163 ~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  241 (387)
T 1kob_A          163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGY  241 (387)
T ss_dssp             HHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred             HHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHH
Confidence            345544  99999999999974  5789999999998765432 223457899999999998888999999999999999


Q ss_pred             HHHcCCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|+.|.  ....+................-+.+...+..+...|++
T Consensus       242 elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  290 (387)
T 1kob_A          242 VLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQ  290 (387)
T ss_dssp             HHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcC
Confidence            999999992  22222222222111102222223445566777777764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.87  E-value=1e-22  Score=167.68  Aligned_cols=83  Identities=18%  Similarity=0.222  Sum_probs=70.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el  162 (208)
                      |||..  +||||||+||+++.++.+||+|||+++.............+|+.|+|||.+.. ..++.++||||+|++++||
T Consensus       123 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  202 (317)
T 2pmi_A          123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM  202 (317)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             HHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHH
Confidence            44443  99999999999999999999999999877544333344578999999998875 4578999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       203 ~~g~~p  208 (317)
T 2pmi_A          203 ITGKPL  208 (317)
T ss_dssp             HHSSCS
T ss_pred             HhCCCC
Confidence            999998

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.87  E-value=1e-22  Score=169.57  Aligned_cols=83  Identities=18%  Similarity=0.272  Sum_probs=69.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~e  161 (208)
                      +|||..  +||||||+||+++.++.+||+|||++....... ......||+.|+|||.+....+ +.++||||+|++++|
T Consensus       122 ~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~  200 (336)
T 3h4j_B          122 EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYV  200 (336)
T ss_dssp             HHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHH
Confidence            344444  999999999999999999999999988655432 2234578999999999887665 689999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       201 ll~g~~P  207 (336)
T 3h4j_B          201 MLVGRLP  207 (336)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999999

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.87  E-value=1e-22  Score=180.19  Aligned_cols=83  Identities=25%  Similarity=0.280  Sum_probs=72.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++...... ......||+.|+|||.+....++.++||||+||++|||
T Consensus       300 ~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeL  378 (576)
T 2acx_A          300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM  378 (576)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHH
Confidence            445544  999999999999999999999999998775432 22345799999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       379 ltG~~P  384 (576)
T 2acx_A          379 IAGQSP  384 (576)
T ss_dssp             HHSSCS
T ss_pred             HhCCCC
Confidence            999999

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.87  E-value=2.5e-22  Score=164.67  Aligned_cols=117  Identities=17%  Similarity=0.129  Sum_probs=74.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~  169 (208)
                      +||||||+||+++.++.+||+|||++...... ........++..|+|||.+....++.++||||+|++++|+++|+.|.
T Consensus       156 ~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  235 (309)
T 2h34_A          156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPY  235 (309)
T ss_dssp             CCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSS
T ss_pred             CcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCC
Confidence            99999999999999999999999998766543 22223456889999999998888899999999999999999999992


Q ss_pred             c-cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 H-FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 ~-~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      . .-.......+...........+.+...+..+...|++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  274 (309)
T 2h34_A          236 QGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMA  274 (309)
T ss_dssp             CSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTC
T ss_pred             CCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhcc
Confidence            1 1112222222222112334456666677777777764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.87  E-value=6e-23  Score=171.23  Aligned_cols=84  Identities=23%  Similarity=0.281  Sum_probs=69.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCC----CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLE----YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~----~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      +|||..  +||||||+||++.+.    +.+||+|||+++.............+|+.|+|||.+....++.++||||+|++
T Consensus       130 ~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  209 (342)
T 2qr7_A          130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVL  209 (342)
T ss_dssp             HHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHH
Confidence            355554  999999999998433    35999999999987655444445678999999999887778899999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++||++|+.|
T Consensus       210 l~ell~g~~P  219 (342)
T 2qr7_A          210 LYTMLTGYTP  219 (342)
T ss_dssp             HHHHHHSSCS
T ss_pred             HHHHhcCCCC
Confidence            9999999999

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.87  E-value=6.2e-23  Score=166.52  Aligned_cols=78  Identities=18%  Similarity=0.367  Sum_probs=68.2

Q ss_pred             hhcCcCCCceeeCCCCc-----EEEcccceeeeecCCCC-------CccccccccccccccccccCCcCcccchHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYE-----ARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        91 iH~dlk~~nilld~~~~-----~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      +||||||+||+++.++.     +||+|||+++.......       ......||+.|+|||.+....++.++||||+|++
T Consensus       128 vH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  207 (298)
T 1csn_A          128 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV  207 (298)
T ss_dssp             ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHH
Confidence            99999999999987766     99999999987765421       2345578999999999988889999999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++|+++|+.|
T Consensus       208 l~el~~g~~p  217 (298)
T 1csn_A          208 FMYFLRGSLP  217 (298)
T ss_dssp             HHHHHHSSCT
T ss_pred             HHHHHcCCCC
Confidence            9999999999

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.87  E-value=7.5e-23  Score=165.88  Aligned_cols=83  Identities=19%  Similarity=0.316  Sum_probs=70.7

Q ss_pred             Hhhhh--hhcCcCCCceee---CCCCcEEEcccceeeeecCCCC-------CccccccccccccccccccCCcCcccchH
Q 039937           86 LLRQE--ISFTTSSKNGLL---DLEYEARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYTLKVAKKCGMH  153 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nill---d~~~~~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~  153 (208)
                      +||..  +||||||+||++   +.++.+||+|||+++.......       ......|++.|+|||.+....++.++|||
T Consensus       120 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  199 (296)
T 3uzp_A          120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  199 (296)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             HHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhH
Confidence            44444  999999999999   4889999999999987765421       12345789999999999988899999999


Q ss_pred             HHHHHHHHHHcCCCC
Q 039937          154 SSGLLALEVMKGKHP  168 (208)
Q Consensus       154 S~Gvvl~elltg~~p  168 (208)
                      |||++++|+++|+.|
T Consensus       200 slG~il~~l~~g~~p  214 (296)
T 3uzp_A          200 SLGYVLMYFNLGSLP  214 (296)
T ss_dssp             HHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999999999

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.87  E-value=8.2e-23  Score=178.20  Aligned_cols=111  Identities=16%  Similarity=0.193  Sum_probs=82.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+|||++.++.+||+|||+++...... .......++..|+|||.+....++.++||||||++++||+| |+.|
T Consensus       340 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p  419 (495)
T 1opk_A          340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  419 (495)
T ss_dssp             ECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCC
Confidence            999999999999999999999999998765431 11223345678999999988889999999999999999999 8888


Q ss_pred             c-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .     ..+.+.+....      .......+...+..+...|++
T Consensus       420 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~  457 (495)
T 1opk_A          420 YPGIDLSQVYELLEKDY------RMERPEGCPEKVYELMRACWQ  457 (495)
T ss_dssp             STTCCGGGHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHcCC------CCCCCCCCCHHHHHHHHHHcC
Confidence            2     22333332221      122234455677777777875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.87  E-value=9.1e-23  Score=168.74  Aligned_cols=84  Identities=23%  Similarity=0.305  Sum_probs=53.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC---cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY---EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~---~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      +|||..  +||||||+||+++.++   .+||+|||+++.............+|+.|+|||.+....++.++||||+|+++
T Consensus       120 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il  199 (325)
T 3kn6_A          120 SHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVIL  199 (325)
T ss_dssp             HHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHH
T ss_pred             HHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHH
Confidence            344444  9999999999997655   89999999998766554444456789999999999888899999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       200 ~~ll~g~~p  208 (325)
T 3kn6_A          200 YTMLSGQVP  208 (325)
T ss_dssp             HHHHHSSCT
T ss_pred             HHHHhCCCC
Confidence            999999999

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.87  E-value=1.4e-22  Score=167.63  Aligned_cols=83  Identities=20%  Similarity=0.310  Sum_probs=70.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC----cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY----EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~----~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      .|||..  +||||||+||+++.++    .+||+|||+++...... ......||+.|+|||.+....++.++||||+|++
T Consensus       128 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  206 (326)
T 2y0a_A          128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI  206 (326)
T ss_dssp             HHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             HHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHH
Confidence            344444  9999999999999887    79999999998775432 2234578999999999988889999999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++||++|+.|
T Consensus       207 l~~ll~g~~p  216 (326)
T 2y0a_A          207 TYILLSGASP  216 (326)
T ss_dssp             HHHHHHSCCS
T ss_pred             HHHHHHCcCC
Confidence            9999999999

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.87  E-value=9.2e-23  Score=167.73  Aligned_cols=114  Identities=15%  Similarity=0.118  Sum_probs=74.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++......  .......+++.|+|||.+....++.++||||+|++++|+++ |+.
T Consensus       159 vH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~  238 (323)
T 3qup_A          159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT  238 (323)
T ss_dssp             CCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCC
Confidence            999999999999999999999999998765432  12223456778999999988889999999999999999999 888


Q ss_pred             Ccc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |..  ...+.........   .....+.+...+..+...|++
T Consensus       239 p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~  277 (323)
T 3qup_A          239 PYAGIENAEIYNYLIGGN---RLKQPPECMEEVYDLMYQCWS  277 (323)
T ss_dssp             TTTTCCGGGHHHHHHTTC---CCCCCTTCCHHHHHHHHHTTC
T ss_pred             CccccChHHHHHHHhcCC---CCCCCCccCHHHHHHHHHHcc
Confidence            821  1111111111111   112234455567777777764

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.87  E-value=1.3e-22  Score=173.54  Aligned_cols=82  Identities=21%  Similarity=0.204  Sum_probs=67.9

Q ss_pred             Hhhhh--hhcCcCCCceeeCCC-CcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      |||..  +||||||+|||++.+ +.+||+|||+++....... .....+|+.|+|||.+... .++.++||||+||+++|
T Consensus       171 ~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  249 (420)
T 1j1b_A          171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE  249 (420)
T ss_dssp             HHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHH
Confidence            44444  999999999999954 6789999999987654322 2335689999999988654 68999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       250 ll~G~~p  256 (420)
T 1j1b_A          250 LLLGQPI  256 (420)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999998

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.87  E-value=6.9e-23  Score=178.29  Aligned_cols=84  Identities=19%  Similarity=0.377  Sum_probs=71.4

Q ss_pred             HHhhhh--hhcCcCCCceee---CCCCcEEEcccceeeeecCCCC-------CccccccccccccccccccCCcCcccch
Q 039937           85 KLLRQE--ISFTTSSKNGLL---DLEYEARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYTLKVAKKCGM  152 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nill---d~~~~~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv  152 (208)
                      +|||..  +||||||+|||+   +.++.+||+|||+++.......       ......||..|+|||.+....++.++||
T Consensus       117 ~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDv  196 (483)
T 3sv0_A          117 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDL  196 (483)
T ss_dssp             HHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred             HHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHH
Confidence            344444  999999999999   6889999999999988765421       1225678999999999998899999999


Q ss_pred             HHHHHHHHHHHcCCCC
Q 039937          153 HSSGLLALEVMKGKHP  168 (208)
Q Consensus       153 ~S~Gvvl~elltg~~p  168 (208)
                      ||||+++|||++|+.|
T Consensus       197 wSlGvil~elltG~~P  212 (483)
T 3sv0_A          197 ESLGYVLMYFLRGSLP  212 (483)
T ss_dssp             HHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999999999

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.87  E-value=1e-22  Score=165.50  Aligned_cols=78  Identities=19%  Similarity=0.176  Sum_probs=63.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC---CCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.+||+|||+++......   .......++..|+|||.+....++.++||||+|++++|++||..
T Consensus       136 vH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~  215 (295)
T 3ugc_A          136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE  215 (295)
T ss_dssp             CCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhccc
Confidence            999999999999999999999999998765431   12223456778999999988889999999999999999999988


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       216 ~  216 (295)
T 3ugc_A          216 K  216 (295)
T ss_dssp             T
T ss_pred             c
Confidence            8

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.87  E-value=1.4e-22  Score=163.66  Aligned_cols=111  Identities=13%  Similarity=0.202  Sum_probs=71.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++....... ......+++.|+|||.+....++.++||||+|++++|+++ |+.|
T Consensus       138 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  217 (281)
T 1mp8_A          138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  217 (281)
T ss_dssp             CCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999987654321 1223346778999999988888999999999999999997 8888


Q ss_pred             c-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .     ..+...+....      ...+.+.+...+..+...|++
T Consensus       218 f~~~~~~~~~~~i~~~~------~~~~~~~~~~~l~~li~~~l~  255 (281)
T 1mp8_A          218 FQGVKNNDVIGRIENGE------RLPMPPNCPPTLYSLMTKCWA  255 (281)
T ss_dssp             TTTCCGGGHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCcCCHHHHHHHHHcCC------CCCCCCCCCHHHHHHHHHHcc
Confidence            2     22333222211      112344555666677777764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.86  E-value=9.7e-23  Score=168.10  Aligned_cols=78  Identities=26%  Similarity=0.236  Sum_probs=66.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCcccccccccccccccccc-----CCcCcccchHHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYT-----LKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||||||+||+++.++.+||+|||+++......  .......||+.|+|||.+..     ..++.++||||||+++|||+
T Consensus       153 vH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~  232 (322)
T 3soc_A          153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA  232 (322)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHH
Confidence            899999999999999999999999998776542  22334578999999998875     35667889999999999999


Q ss_pred             cCCCC
Q 039937          164 KGKHP  168 (208)
Q Consensus       164 tg~~p  168 (208)
                      ||+.|
T Consensus       233 tg~~p  237 (322)
T 3soc_A          233 SRCTA  237 (322)
T ss_dssp             TTBTT
T ss_pred             hCCCC
Confidence            99887

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.86  E-value=1.1e-22  Score=176.13  Aligned_cols=83  Identities=20%  Similarity=0.181  Sum_probs=66.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++...... ......||+.|+|||.+....++.++||||+||+++||
T Consensus       178 ~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  256 (464)
T 3ttj_A          178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  256 (464)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC-CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc-ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            455554  999999999999999999999999998765432 23446789999999999988999999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       257 l~g~~p  262 (464)
T 3ttj_A          257 VRHKIL  262 (464)
T ss_dssp             HHSSCS
T ss_pred             HhCCCC
Confidence            999998

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.86  E-value=5e-23  Score=173.04  Aligned_cols=119  Identities=17%  Similarity=0.081  Sum_probs=82.7

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCC---cEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEY---EARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~---~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      |||..  +||||||+|||++.++   .+||+|||+++.....  ........+|+.|+|||.+....++.++||||||++
T Consensus       196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~i  275 (367)
T 3l9p_A          196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL  275 (367)
T ss_dssp             HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHH
Confidence            44444  9999999999999544   5999999999755322  222234567889999999988889999999999999


Q ss_pred             HHHHHc-CCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          159 ALEVMK-GKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       159 l~ellt-g~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++||++ |+.|  .....+.........   .......+...+..+...|++
T Consensus       276 l~ellt~g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~~l~  324 (367)
T 3l9p_A          276 LWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDPPKNCPGPVYRIMTQCWQ  324 (367)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCccCCHHHHHHHHHHcC
Confidence            999998 8888  222222222222221   111233455567777777765

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.86  E-value=1.3e-22  Score=165.45  Aligned_cols=119  Identities=22%  Similarity=0.269  Sum_probs=86.1

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||..  +||||||+||+++.++.+||+|||++..............++..|+|||.+....++.++||||||++++|++
T Consensus       134 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  213 (303)
T 3a7i_A          134 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA  213 (303)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHc
Confidence            44444  9999999999999999999999999988765433334557899999999998888999999999999999999


Q ss_pred             cCCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          164 KGKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       164 tg~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+.|..  ...+....... .  ....+...+...+..+...|++
T Consensus       214 ~g~~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~li~~~l~  256 (303)
T 3a7i_A          214 RGEPPHSELHPMKVLFLIPK-N--NPPTLEGNYSKPLKEFVEACLN  256 (303)
T ss_dssp             HSSCTTTTSCHHHHHHHHHH-S--CCCCCCSSCCHHHHHHHHHHCC
T ss_pred             cCCCCCCCcCHHHHHHHhhc-C--CCCCCccccCHHHHHHHHHHcC
Confidence            9999922  11111111111 1  1122344455566666666664

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.86  E-value=1.4e-22  Score=162.28  Aligned_cols=114  Identities=18%  Similarity=0.175  Sum_probs=80.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+||+|||++....... .......+++.|+|||.+....++.++||||+|++++|+++ |+.|
T Consensus       126 ~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p  205 (268)
T 3sxs_A          126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP  205 (268)
T ss_dssp             EESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCT
T ss_pred             ecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999998765442 11223345678999999988889999999999999999999 9988


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ..-.+.........   ...........+..+...|++
T Consensus       206 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~  243 (268)
T 3sxs_A          206 YDLYTNSEVVLKVSQGH---RLYRPHLASDTIYQIMYSCWH  243 (268)
T ss_dssp             TTTSCHHHHHHHHHTTC---CCCCCTTSCHHHHHHHHHTTC
T ss_pred             ccccChHHHHHHHHcCC---CCCCCCcChHHHHHHHHHHcC
Confidence            2  22222222222211   111222334456667666664

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.86  E-value=2e-22  Score=162.94  Aligned_cols=121  Identities=19%  Similarity=0.228  Sum_probs=75.6

Q ss_pred             HHHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccc----ccCCcCcccchHHHH
Q 039937           84 EKLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELT----YTLKVAKKCGMHSSG  156 (208)
Q Consensus        84 ~~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~S~G  156 (208)
                      ..+||..   +||||||+||+++.++.+||+|||+++....... .....|++.|+|||.+    ....++.++||||+|
T Consensus       122 l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG  200 (290)
T 3fme_A          122 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLG  200 (290)
T ss_dssp             HHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHH
T ss_pred             HHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHH
Confidence            3455543   9999999999999999999999999987654321 2234688999999996    456788999999999


Q ss_pred             HHHHHHHcCCCCc---ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          157 LLALEVMKGKHPR---HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       157 vvl~elltg~~p~---~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++++|+++|+.|.   ..-...........  ........+...+..+...|++
T Consensus       201 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~  252 (290)
T 3fme_A          201 ITMIELAILRFPYDSWGTPFQQLKQVVEEP--SPQLPADKFSAEFVDFTSQCLK  252 (290)
T ss_dssp             HHHHHHHHTSCSSCCCSCHHHHHHHHHHSC--CCCCCTTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCccccCchHHHHHHHhccC--CCCcccccCCHHHHHHHHHHhh
Confidence            9999999999992   22222222222222  2222234455567777777765

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.86  E-value=8.9e-23  Score=168.64  Aligned_cols=83  Identities=17%  Similarity=0.291  Sum_probs=70.8

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCc-----EEEcccceeeeecCCCC-------CccccccccccccccccccCCcCcccc
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYE-----ARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYTLKVAKKCG  151 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~-----~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~D  151 (208)
                      |||..  +||||||+||+++.++.     +||+|||+++.......       ......||+.|+|||.+....++.++|
T Consensus       120 ~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  199 (330)
T 2izr_A          120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDD  199 (330)
T ss_dssp             HHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHH
T ss_pred             HHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhH
Confidence            44443  99999999999998887     99999999987654321       123567899999999999888999999


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      |||||++++||++|+.|
T Consensus       200 i~slG~il~ell~g~~P  216 (330)
T 2izr_A          200 LEALGHMFMYFLRGSLP  216 (330)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHhcCCCC
Confidence            99999999999999999

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.86  E-value=4.2e-22  Score=161.72  Aligned_cols=84  Identities=26%  Similarity=0.347  Sum_probs=72.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++||..  +||||||+||+++.++.+||+|||++..............++..|+|||.+.....+.++||||+|++++||
T Consensus       129 ~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  208 (294)
T 2rku_A          129 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL  208 (294)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHH
Confidence            344444  999999999999999999999999998776443334456789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       209 ~~g~~p  214 (294)
T 2rku_A          209 LVGKPP  214 (294)
T ss_dssp             HHSSCT
T ss_pred             HhCCCC
Confidence            999999

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.86  E-value=6e-23  Score=166.52  Aligned_cols=84  Identities=21%  Similarity=0.232  Sum_probs=66.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      ++||..  +||||||+||+++.++.+||+|||+++.............+|+.|+|||.+.. ..++.++||||+|++++|
T Consensus       114 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  193 (288)
T 1ob3_A          114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE  193 (288)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHH
Confidence            345544  99999999999999999999999998765543223334567999999998865 457899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       194 l~~g~~p  200 (288)
T 1ob3_A          194 MVNGTPL  200 (288)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999998

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.86  E-value=2.2e-22  Score=169.79  Aligned_cols=114  Identities=16%  Similarity=0.149  Sum_probs=83.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++......  .......+++.|+|||.+....++.++||||||++++|+++ |+.
T Consensus       213 vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~  292 (382)
T 3tt0_A          213 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS  292 (382)
T ss_dssp             CCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999998765431  22233456789999999998889999999999999999999 888


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  .....+.........   .......+...+..+...|++
T Consensus       293 p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~  331 (382)
T 3tt0_A          293 PYPGVPVEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWH  331 (382)
T ss_dssp             SSTTCCHHHHHHHHHTTC---CCCCCSSCCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHcCC---CCCCCccCCHHHHHHHHHHcC
Confidence            8  223333333222221   112234455567777777765

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.86  E-value=4.4e-22  Score=160.56  Aligned_cols=83  Identities=20%  Similarity=0.273  Sum_probs=69.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCc---EEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYE---ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~---~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .+||..  +||||||+||+++.++.   +||+|||++....... ......+++.|+|||.+....++.++||||+|+++
T Consensus       119 ~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  197 (284)
T 3kk8_A          119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL  197 (284)
T ss_dssp             HHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred             HHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHH
Confidence            344444  99999999999986655   9999999998765432 22345689999999999988899999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +++++|+.|
T Consensus       198 ~~l~~g~~p  206 (284)
T 3kk8_A          198 YILLVGYPP  206 (284)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHHCCCC
Confidence            999999999

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.86  E-value=2.9e-22  Score=163.82  Aligned_cols=115  Identities=17%  Similarity=0.205  Sum_probs=74.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCc-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR-  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~-  169 (208)
                      +||||||+||+++.++.+||+|||++..............++..|+|||.+....++.++||||||++++||++|+.|. 
T Consensus       158 ~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~  237 (310)
T 2wqm_A          158 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY  237 (310)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             eCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            9999999999999999999999999887654433333456889999999998888999999999999999999999992 


Q ss_pred             ---ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 ---HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 ---~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                         ....++........  ........+...+..+...|++
T Consensus       238 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  276 (310)
T 2wqm_A          238 GDKMNLYSLCKKIEQCD--YPPLPSDHYSEELRQLVNMCIN  276 (310)
T ss_dssp             ---CCHHHHHHHHHTTC--SCCCCTTTSCHHHHHHHHHHTC
T ss_pred             ccchhHHHHHHHhhccc--CCCCcccccCHHHHHHHHHHcC
Confidence               12333333322221  2222334455567777777764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.86  E-value=5.2e-23  Score=175.62  Aligned_cols=74  Identities=14%  Similarity=-0.002  Sum_probs=64.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccc----------ccCCcCcccchHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELT----------YTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +||||||+|||++.++.+||+|||+++.....   .....| +.|+|||.+          ....++.++|||||||++|
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~  308 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY  308 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence            99999999999999999999999998865433   233456 999999998          5556788999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       309 elltg~~P  316 (413)
T 3dzo_A          309 WIWCADLP  316 (413)
T ss_dssp             HHHHSSCC
T ss_pred             HHHHCCCC
Confidence            99999999

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.86  E-value=1.9e-22  Score=171.11  Aligned_cols=83  Identities=22%  Similarity=0.245  Sum_probs=69.4

Q ss_pred             HHhhhh--hhcCcCCCceeeC-CCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~  160 (208)
                      .|||..  +||||||+||+++ .++.+||+|||+++....... .....+|+.|+|||.+... .++.++||||+||+++
T Consensus       155 ~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~  233 (394)
T 4e7w_A          155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMA  233 (394)
T ss_dssp             HHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             HHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHH
Confidence            345544  9999999999999 799999999999987654422 2234679999999988654 5899999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       234 ell~g~~p  241 (394)
T 4e7w_A          234 ELMQGQPL  241 (394)
T ss_dssp             HHHHSSCS
T ss_pred             HHHhCCCC
Confidence            99999999

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.86  E-value=2.6e-22  Score=169.16  Aligned_cols=121  Identities=17%  Similarity=0.101  Sum_probs=84.7

Q ss_pred             Hhhhh--hhcCcCCCceee--CCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLL--DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nill--d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      |||..  +||||||+||++  +.++.+||+|||+++....... .....||+.|+|||.+....++.++||||||++++|
T Consensus       202 ~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  280 (373)
T 2x4f_A          202 HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYM  280 (373)
T ss_dssp             HHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHH
T ss_pred             HHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHH
Confidence            44444  999999999999  6778999999999988754422 233468999999999988888999999999999999


Q ss_pred             HHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 lltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |++|+.|  ...-.+................-+.+...+..+...|++
T Consensus       281 lltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  328 (373)
T 2x4f_A          281 LLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLI  328 (373)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcC
Confidence            9999999  222222222222211112111223455566677777764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.86  E-value=1.1e-22  Score=175.50  Aligned_cols=114  Identities=16%  Similarity=0.173  Sum_probs=77.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+|||++.++.+||+|||+++...... .......++..|+|||.+....++.++||||||++++||++ |+.|
T Consensus       302 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P  381 (452)
T 1fmk_A          302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  381 (452)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             eCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCC
Confidence            999999999999999999999999998765431 12223456778999999988889999999999999999999 8888


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ....+........   ......+.+...+..+...|++
T Consensus       382 ~~~~~~~~~~~~i~~~---~~~~~~~~~~~~l~~li~~cl~  419 (452)
T 1fmk_A          382 YPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQCWR  419 (452)
T ss_dssp             STTCCHHHHHHHHHTT---CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHcc
Confidence            2  2222222222221   1122244555667777777765

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.86  E-value=3.4e-22  Score=165.67  Aligned_cols=84  Identities=26%  Similarity=0.347  Sum_probs=72.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      ++||..  +||||||+||+++.++.+||+|||++..............|+..|+|||.+....++.++||||+|++++||
T Consensus       155 ~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l  234 (335)
T 2owb_A          155 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL  234 (335)
T ss_dssp             HHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence            344444  999999999999999999999999998876443334456789999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       235 ~~g~~p  240 (335)
T 2owb_A          235 LVGKPP  240 (335)
T ss_dssp             HHSSCT
T ss_pred             HHCcCC
Confidence            999999

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.86  E-value=3.4e-22  Score=161.11  Aligned_cols=82  Identities=28%  Similarity=0.352  Sum_probs=66.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .+||..  +||||||+||+++.++.+||+|||++......  ......++..|+|||.+.....+.++||||+|++++|+
T Consensus       123 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  200 (279)
T 3fdn_A          123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF  200 (279)
T ss_dssp             HHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHH
Confidence            344444  99999999999999999999999988654432  22345689999999999888889999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       201 ~~g~~p  206 (279)
T 3fdn_A          201 LVGKPP  206 (279)
T ss_dssp             HHSSCT
T ss_pred             HHCCCC
Confidence            999999

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=3.7e-22  Score=166.17  Aligned_cols=84  Identities=25%  Similarity=0.190  Sum_probs=70.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.............+|+.|+|||.+.. ..++.++||||+|++++|
T Consensus       126 ~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  205 (346)
T 1ua2_A          126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE  205 (346)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHH
Confidence            345544  99999999999999999999999999876544333445678999999998865 447899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       206 ll~g~~~  212 (346)
T 1ua2_A          206 LLLRVPF  212 (346)
T ss_dssp             HHHSSCS
T ss_pred             HHHCCCC
Confidence            9999988

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.86  E-value=2.9e-22  Score=168.10  Aligned_cols=120  Identities=20%  Similarity=0.130  Sum_probs=75.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCc--EEEcccceeeeecCCCCCccccccccccccccccccCCcCcc-cchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYE--ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKK-CGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~--~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~S~Gvvl  159 (208)
                      .|||..  +||||||+||+++.++.  +||+|||+++...... ......||+.|+|||.+....++.+ +||||+|+++
T Consensus       130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  208 (361)
T 3uc3_A          130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTL  208 (361)
T ss_dssp             HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHH
T ss_pred             HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHH
Confidence            355544  99999999999987765  9999999987543322 2233568999999999887776555 8999999999


Q ss_pred             HHHHcCCCCc------ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMKGKHPR------HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~elltg~~p~------~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +||++|+.|.      ......+.......  ..--.+..+...+..+...|++
T Consensus       209 ~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~~L~  260 (361)
T 3uc3_A          209 YVMLVGAYPFEDPEEPRDYRKTIQRILSVK--YSIPDDIRISPECCHLISRIFV  260 (361)
T ss_dssp             HHHHHSSCSCC----CCCHHHHHHHHHTTC--CCCCTTSCCCHHHHHHHHHHSC
T ss_pred             HHHHhCCCCCCCCccHHHHHHHHHHHhcCC--CCCCCcCCCCHHHHHHHHHHcc
Confidence            9999999992      23333444333322  1111223445566666666654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.86  E-value=1.2e-22  Score=175.15  Aligned_cols=81  Identities=20%  Similarity=0.221  Sum_probs=63.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC---------------------------CCcccccccccc
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS---------------------------SNRTELAGTYGY  135 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~---------------------------~~~~~~~g~~~y  135 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++......                           .......||+.|
T Consensus       170 ~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  249 (458)
T 3rp9_A          170 KYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWY  249 (458)
T ss_dssp             HHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTT
T ss_pred             HHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccc
Confidence            455554  999999999999999999999999998764321                           112345679999


Q ss_pred             cccccc-ccCCcCcccchHHHHHHHHHHHcC
Q 039937          136 IALELT-YTLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus       136 ~aPE~~-~~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +|||.+ ....++.++||||+||+++||++|
T Consensus       250 ~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          250 RAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            999976 456689999999999999999995

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.86  E-value=1.3e-22  Score=162.68  Aligned_cols=119  Identities=19%  Similarity=0.190  Sum_probs=82.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||..  +||||||+||+++.++.+||+|||+++..... ........++..|+|||.+....++.++||||+|++++|+
T Consensus       121 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  200 (269)
T 4hcu_A          121 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV  200 (269)
T ss_dssp             HHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHH
Confidence            44444  99999999999999999999999998765433 1122234567789999999888899999999999999999


Q ss_pred             Hc-CCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MK-GKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 lt-g~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++ |+.|  .....+........   ............+..+...|++
T Consensus       201 l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~  245 (269)
T 4hcu_A          201 FSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQIMNHCWR  245 (269)
T ss_dssp             HTTSCCTTTTCCHHHHHHHHHTT---CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             hcCCCCCCCCCCHHHHHHHHhcC---ccCCCCCcCCHHHHHHHHHHcc
Confidence            99 8888  22222232222221   1122233334456666666654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.86  E-value=7e-22  Score=168.00  Aligned_cols=77  Identities=26%  Similarity=0.223  Sum_probs=62.7

Q ss_pred             hhcCcCCCceeeCC---CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDL---EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~---~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+|||++.   ++.+||+|||+++...... ......||+.|+|||.+....++.++|||||||+++||++|+.
T Consensus       183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  261 (400)
T 1nxk_A          183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP  261 (400)
T ss_dssp             ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSC
T ss_pred             cccCcCcceEEEecCCCCccEEEEecccccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCC
Confidence            99999999999997   7899999999998765432 2234578999999999988889999999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       262 p  262 (400)
T 1nxk_A          262 P  262 (400)
T ss_dssp             S
T ss_pred             C
Confidence            9

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.86  E-value=1.4e-22  Score=168.36  Aligned_cols=84  Identities=20%  Similarity=0.264  Sum_probs=71.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~e  161 (208)
                      .|||..  +||||||+||+++.++.+||+|||+++....... .....||+.|+|||.+....+ +.++||||+|++++|
T Consensus       144 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  222 (335)
T 3dls_A          144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYT  222 (335)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred             HHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHH
Confidence            345544  9999999999999999999999999987765432 234568999999999887766 789999999999999


Q ss_pred             HHcCCCCc
Q 039937          162 VMKGKHPR  169 (208)
Q Consensus       162 lltg~~p~  169 (208)
                      |++|+.|.
T Consensus       223 l~~g~~pf  230 (335)
T 3dls_A          223 LVFEENPF  230 (335)
T ss_dssp             HHHSSCSC
T ss_pred             HHhCCCch
Confidence            99999994

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.86  E-value=3.5e-22  Score=160.13  Aligned_cols=113  Identities=19%  Similarity=0.222  Sum_probs=76.0

Q ss_pred             hhcCcCCCceeeCC--------CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDL--------EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        91 iH~dlk~~nilld~--------~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||||||+||+++.        ++.+|++|||+++.......  ....|++.|+|||.+....++.++||||+|++++|+
T Consensus       130 ~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  207 (271)
T 3dtc_A          130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWEL  207 (271)
T ss_dssp             CCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred             eecCCchHHEEEecccccccccCcceEEccCCcccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHH
Confidence            59999999999986        77899999999986654322  234689999999999888889999999999999999


Q ss_pred             HcCCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|+.|..  .-...........  ....+...+...+..+...|++
T Consensus       208 ~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~  252 (271)
T 3dtc_A          208 LTGEVPFRGIDGLAVAYGVAMNK--LALPIPSTCPEPFAKLMEDCWN  252 (271)
T ss_dssp             HHCCCTTTTSCHHHHHHHHHTSC--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             HhCCCCCCCCCHHHHHHhhhcCC--CCCCCCcccCHHHHHHHHHHhc
Confidence            99999922  1112222222222  2233345555677777777765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.86  E-value=1.3e-22  Score=163.79  Aligned_cols=114  Identities=14%  Similarity=0.139  Sum_probs=80.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++..... ........+++.|+|||.+....++.++||||+|++++|++| |+.|
T Consensus       142 ~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p  221 (283)
T 3gen_A          142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP  221 (283)
T ss_dssp             CCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999998765432 111223346778999999988889999999999999999998 9988


Q ss_pred             cc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..  ...+........   ............+..+...|++
T Consensus       222 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~  259 (283)
T 3gen_A          222 YERFTNSETAEHIAQG---LRLYRPHLASEKVYTIMYSCWH  259 (283)
T ss_dssp             TTTSCHHHHHHHHHTT---CCCCCCTTCCHHHHHHHHHTTC
T ss_pred             ccccChhHHHHHHhcc---cCCCCCCcCCHHHHHHHHHHcc
Confidence            22  222222222221   1122233344566677777764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.86  E-value=3.3e-22  Score=165.20  Aligned_cols=83  Identities=22%  Similarity=0.320  Sum_probs=67.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCC---CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDL---EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~---~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      ++||..  +||||||+||+++.   ++.+||+|||+++....... .....|++.|+|||.+....++.++||||+|+++
T Consensus       145 ~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  223 (327)
T 3lm5_A          145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPEILNYDPITTATDMWNIGIIA  223 (327)
T ss_dssp             HHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             HHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc-cccccCCcCccCCeeecCCCCCchhhHHHHHHHH
Confidence            344444  99999999999997   78999999999987654322 2345689999999999888899999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       224 ~~ll~g~~p  232 (327)
T 3lm5_A          224 YMLLTHTSP  232 (327)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.86  E-value=5.3e-22  Score=163.37  Aligned_cols=82  Identities=21%  Similarity=0.305  Sum_probs=70.2

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCC----cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEY----EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~----~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      +||..  +||||||+||+++.++    .+||+|||+++....... .....|++.|+|||.+....++.++||||+|+++
T Consensus       130 ~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  208 (321)
T 2a2a_A          130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT  208 (321)
T ss_dssp             HHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCC-CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             HHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcccc-ccccCCCCCccCcccccCCCCCCccccHHHHHHH
Confidence            44444  9999999999999887    799999999987665422 2345689999999999888899999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       209 ~~l~~g~~p  217 (321)
T 2a2a_A          209 YILLSGASP  217 (321)
T ss_dssp             HHHHHSCCS
T ss_pred             HHHHHCCCC
Confidence            999999999

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=4.2e-22  Score=167.99  Aligned_cols=111  Identities=22%  Similarity=0.263  Sum_probs=71.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-C
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-G  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g  165 (208)
                      +||||||+||+++.++.+||+|||+++......    .......++..|+|||.+....++.++||||||+++||++| |
T Consensus       214 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~  293 (373)
T 3c1x_A          214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  293 (373)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCc
Confidence            999999999999999999999999998654331    11233456788999999988889999999999999999999 5


Q ss_pred             CCC-----cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          166 KHP-----RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       166 ~~p-----~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..|     ...+...+....      .....+.+...+..+...|++
T Consensus       294 ~~p~~~~~~~~~~~~~~~~~------~~~~p~~~~~~l~~li~~cl~  334 (373)
T 3c1x_A          294 APPYPDVNTFDITVYLLQGR------RLLQPEYCPDPLYEVMLKCWH  334 (373)
T ss_dssp             CCSCTTSCSSCHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCCCHHHHHHHHHcCC------CCCCCCCCCHHHHHHHHHHcC
Confidence            555     122333322211      111233445566777777764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.86  E-value=2.4e-22  Score=172.35  Aligned_cols=80  Identities=20%  Similarity=0.191  Sum_probs=69.1

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCc--EEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYE--ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~--~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      |||..  +||||||+|||++.++.  +||+|||++......   .....+|+.|+|||.+....++.++|||||||+++|
T Consensus       215 ~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  291 (429)
T 3kvw_A          215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAE  291 (429)
T ss_dssp             HHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHH
T ss_pred             HHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHH
Confidence            44444  99999999999999887  999999999765433   223578999999999998889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       292 lltG~~p  298 (429)
T 3kvw_A          292 LLTGYPL  298 (429)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999988

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.86  E-value=2.7e-22  Score=161.49  Aligned_cols=78  Identities=23%  Similarity=0.332  Sum_probs=48.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||++..............+++.|+|||.+....++.++||||+|++++|+++|+.|
T Consensus       134 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  211 (278)
T 3cok_A          134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP  211 (278)
T ss_dssp             ECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCS
T ss_pred             ecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999998765433233345689999999999888889999999999999999999999

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.86  E-value=6e-22  Score=170.76  Aligned_cols=108  Identities=19%  Similarity=0.176  Sum_probs=79.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCCc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~  169 (208)
                      +||||||+|||++.++.+||+|||+++......   ....++..|+|||.+....++.++||||||++++||+| |+.|.
T Consensus       311 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~  387 (450)
T 1k9a_A          311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  387 (450)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             eCCCCCHhhEEECCCCCEEEeeCCCcccccccc---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999999998654321   12256788999999998899999999999999999998 99882


Q ss_pred             -----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 -----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 -----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                           ..+...+....      .....+.....+..+...|++
T Consensus       388 ~~~~~~~~~~~i~~~~------~~~~p~~~~~~l~~li~~cl~  424 (450)
T 1k9a_A          388 PRIPLKDVVPRVEKGY------KMDAPDGCPPAVYDVMKNCWH  424 (450)
T ss_dssp             TTSCTTTHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHcCC------CCCCCCcCCHHHHHHHHHHcC
Confidence                 22333332211      112234455567777777765

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.85  E-value=4e-22  Score=166.33  Aligned_cols=75  Identities=25%  Similarity=0.210  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeCC-------------------------CCcEEEcccceeeeecCCCCCccccccccccccccccccCC
Q 039937           91 ISFTTSSKNGLLDL-------------------------EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK  145 (208)
Q Consensus        91 iH~dlk~~nilld~-------------------------~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  145 (208)
                      +||||||+|||++.                         ++.+||+|||+++......   ....||+.|+|||.+....
T Consensus       159 vHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~---~~~~gt~~y~aPE~~~~~~  235 (360)
T 3llt_A          159 THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH---GSIINTRQYRAPEVILNLG  235 (360)
T ss_dssp             ECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC---CSCCSCGGGCCHHHHTTCC
T ss_pred             eeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC---cCccCcccccCcHHHcCCC
Confidence            99999999999985                         7889999999998754332   3456899999999999889


Q ss_pred             cCcccchHHHHHHHHHHHcCCCC
Q 039937          146 VAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       146 ~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ++.++||||+|++++||++|+.|
T Consensus       236 ~~~~~DiwslG~il~ell~g~~p  258 (360)
T 3llt_A          236 WDVSSDMWSFGCVLAELYTGSLL  258 (360)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCccchHHHHHHHHHHHHCCCC
Confidence            99999999999999999999999

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.85  E-value=1.2e-22  Score=164.26  Aligned_cols=111  Identities=16%  Similarity=0.190  Sum_probs=80.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+||+|||++....... .......+++.|+|||.+....++.++||||+|++++++++ |+.|
T Consensus       133 ~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p  212 (288)
T 3kfa_A          133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  212 (288)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999987665432 12233456778999999988889999999999999999999 8888


Q ss_pred             c-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .     ..+.+.+.....      ......+...+..+...|++
T Consensus       213 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~  250 (288)
T 3kfa_A          213 YPGIDLSQVYELLEKDYR------MERPEGCPEKVYELMRACWQ  250 (288)
T ss_dssp             STTCCGGGHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHhccCC------CCCCCCCCHHHHHHHHHHhC
Confidence            2     223333322211      12233444566666666654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=6.3e-22  Score=160.59  Aligned_cols=84  Identities=21%  Similarity=0.310  Sum_probs=68.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.....    ........++..|+|||.+....++.++||||+|++
T Consensus       138 ~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  217 (298)
T 3pls_A          138 EYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVL  217 (298)
T ss_dssp             HHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHH
Confidence            344444  99999999999999999999999999755432    122234567889999999998889999999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++|+++|..|
T Consensus       218 l~~l~~g~~~  227 (298)
T 3pls_A          218 LWELLTRGAP  227 (298)
T ss_dssp             HHHHHHTSCC
T ss_pred             HHHHhhCCCC
Confidence            9999996666

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.85  E-value=2e-22  Score=165.79  Aligned_cols=115  Identities=19%  Similarity=0.230  Sum_probs=73.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+||+++.++.+||+|||++..............++..|+|||.+.     ...++.++||||+|++++||++|
T Consensus       151 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g  230 (326)
T 2x7f_A          151 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG  230 (326)
T ss_dssp             CCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHS
T ss_pred             cccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhC
Confidence            9999999999999999999999999876654322233456899999999886     56678999999999999999999


Q ss_pred             CCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          166 KHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       166 ~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +.|..  .............  ......+.+...+..+...|++
T Consensus       231 ~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  272 (326)
T 2x7f_A          231 APPLCDMHPMRALFLIPRNP--APRLKSKKWSKKFQSFIESCLV  272 (326)
T ss_dssp             SCTTTTSCHHHHHHHHHHSC--CCCCSCSCSCHHHHHHHHHHCC
T ss_pred             CCCCCCCcHHHHHHHhhcCc--cccCCccccCHHHHHHHHHHhc
Confidence            99921  1111111111111  2222344455566666666654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.85  E-value=5e-22  Score=160.28  Aligned_cols=78  Identities=13%  Similarity=0.190  Sum_probs=64.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+||+|||++....... .......++..|+|||.+....++.++||||+|++++|+++ |+.|
T Consensus       135 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p  214 (281)
T 3cc6_A          135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP  214 (281)
T ss_dssp             CCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             ccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999987665431 12233456788999999988888999999999999999998 9998

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.85  E-value=8.5e-23  Score=170.12  Aligned_cols=78  Identities=22%  Similarity=0.299  Sum_probs=67.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++......  .......+|..|+|||.+....++.++||||||++++||+| |+.
T Consensus       215 vH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  294 (359)
T 3vhe_A          215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  294 (359)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCC
Confidence            999999999999999999999999998664432  12234567889999999988889999999999999999998 998


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       295 p  295 (359)
T 3vhe_A          295 P  295 (359)
T ss_dssp             S
T ss_pred             C
Confidence            8

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.85  E-value=2.9e-22  Score=163.76  Aligned_cols=84  Identities=18%  Similarity=0.188  Sum_probs=65.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||||+||+++.++.+||+|||++..............++..|+|||.+.. ..++.++||||+|++++|
T Consensus       116 ~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  195 (311)
T 4agu_A          116 NFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAE  195 (311)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHH
Confidence            345544  99999999999999999999999999887654333345578999999998875 667899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       196 l~~g~~p  202 (311)
T 4agu_A          196 LLSGVPL  202 (311)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999998

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.85  E-value=7.7e-22  Score=161.48  Aligned_cols=78  Identities=28%  Similarity=0.338  Sum_probs=69.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +|+||||+||+++.++.+||+|||++..............++..|+|||.+....++.++||||+|++++||++|+.|
T Consensus       147 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  224 (314)
T 3com_A          147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP  224 (314)
T ss_dssp             ECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999998776543333455789999999999888899999999999999999999999

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=4.9e-22  Score=164.71  Aligned_cols=114  Identities=16%  Similarity=0.182  Sum_probs=75.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||||+||+++.++.+||+|||+++.......   ......++..|+|||.+....++.++||||||++++|+++ |+
T Consensus       169 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  248 (333)
T 1mqb_A          169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE  248 (333)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             eCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999987654311   1122345678999999988889999999999999999999 99


Q ss_pred             CCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          167 HPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|.  ....+.........   .......+...+..+...|++
T Consensus       249 ~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~  288 (333)
T 1mqb_A          249 RPYWELSNHEVMKAINDGF---RLPTPMDCPSAIYQLMMQCWQ  288 (333)
T ss_dssp             CTTTTCCHHHHHHHHHTTC---CCCCCTTCBHHHHHHHHHHTC
T ss_pred             CCcccCCHHHHHHHHHCCC---cCCCcccCCHHHHHHHHHHcC
Confidence            982  22222222222111   111233455566677777764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.85  E-value=3e-22  Score=165.33  Aligned_cols=78  Identities=21%  Similarity=0.188  Sum_probs=64.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--------CCcccccccccccccccccc-------CCcCcccchHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--------SNRTELAGTYGYIALELTYT-------LKVAKKCGMHSS  155 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~S~  155 (208)
                      +||||||+|||++.++.+||+|||+++......        .......||+.|+|||.+..       ..++.++|||||
T Consensus       142 vH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl  221 (336)
T 3g2f_A          142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYAL  221 (336)
T ss_dssp             ECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHH
T ss_pred             eecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHH
Confidence            899999999999999999999999998765321        11224468999999998875       456688999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      |++++||++|..|
T Consensus       222 G~il~ell~g~~p  234 (336)
T 3g2f_A          222 GLIYWEIFMRCTD  234 (336)
T ss_dssp             HHHHHHHHTTBGG
T ss_pred             HHHHHHHHhcCCc
Confidence            9999999999766

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=3.4e-22  Score=164.83  Aligned_cols=75  Identities=25%  Similarity=0.210  Sum_probs=61.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC----CccccccccccccccccccCCcCcc------cchHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS----NRTELAGTYGYIALELTYTLKVAKK------CGMHSSGLLAL  160 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~S~Gvvl~  160 (208)
                      +||||||+||+++.++.+||+|||+++.......    ......||+.|+|||.+.......+      +||||||+++|
T Consensus       164 vH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~  243 (337)
T 3mdy_A          164 AHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW  243 (337)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHH
T ss_pred             EecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHH
Confidence            8999999999999999999999999987654321    1224578999999999876655554      89999999999


Q ss_pred             HHHcC
Q 039937          161 EVMKG  165 (208)
Q Consensus       161 elltg  165 (208)
                      ||+||
T Consensus       244 el~tg  248 (337)
T 3mdy_A          244 EVARR  248 (337)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            99999

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.85  E-value=4.1e-22  Score=160.50  Aligned_cols=114  Identities=16%  Similarity=0.135  Sum_probs=81.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+||+|||++....... .......++..|+|||.+....++.++||||+|++++||++ |+.|
T Consensus       131 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  210 (279)
T 1qpc_A          131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP  210 (279)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             eccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999998765431 11223456778999999988888999999999999999999 8888


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ....+........   ........+...+..+...|++
T Consensus       211 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~  248 (279)
T 1qpc_A          211 YPGMTNPEVIQNLERG---YRMVRPDNCPEELYQLMRLCWK  248 (279)
T ss_dssp             STTCCHHHHHHHHHTT---CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CcccCHHHHHHHHhcc---cCCCCcccccHHHHHHHHHHhc
Confidence            2  2222222222211   1122234455566777777764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.85  E-value=7.2e-22  Score=160.53  Aligned_cols=78  Identities=27%  Similarity=0.353  Sum_probs=64.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~  166 (208)
                      +||||||+||+++.++.+||+|||+++.....    ........+++.|+|||.+....++.++||||+|++++|+++|.
T Consensus       150 ~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~  229 (298)
T 3f66_A          150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  229 (298)
T ss_dssp             CCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999865432    11223445678899999998888999999999999999999955


Q ss_pred             CC
Q 039937          167 HP  168 (208)
Q Consensus       167 ~p  168 (208)
                      .|
T Consensus       230 ~~  231 (298)
T 3f66_A          230 AP  231 (298)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.85  E-value=3.6e-22  Score=166.37  Aligned_cols=83  Identities=20%  Similarity=0.183  Sum_probs=69.3

Q ss_pred             HHhh--hh--hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHH
Q 039937           85 KLLR--QE--ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh--~~--iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvv  158 (208)
                      .++|  ..  +||||||+||+++. ++.+||+|||+++....... .....||+.|+|||.+... .++.++||||+|++
T Consensus       143 ~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i  221 (360)
T 3e3p_A          143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCI  221 (360)
T ss_dssp             HHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             HHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHH
Confidence            4556  43  99999999999996 89999999999987654422 2345679999999988654 47999999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++||++|+.|
T Consensus       222 l~ell~g~~p  231 (360)
T 3e3p_A          222 FAEMMLGEPI  231 (360)
T ss_dssp             HHHHHHSSCS
T ss_pred             HHHHHhCCCC
Confidence            9999999999

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.85  E-value=1e-21  Score=158.81  Aligned_cols=112  Identities=16%  Similarity=0.153  Sum_probs=79.8

Q ss_pred             hhcCcCCCceeeCCCCc-----EEEcccceeeeecCCCCCccccccccccccccccc--cCCcCcccchHHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYE-----ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY--TLKVAKKCGMHSSGLLALEVM  163 (208)
Q Consensus        91 iH~dlk~~nilld~~~~-----~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~S~Gvvl~ell  163 (208)
                      +||||||+||+++.++.     +||+|||+++....   ......+++.|+|||.+.  ...++.++||||+|++++|++
T Consensus       146 vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~  222 (287)
T 4f0f_A          146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL  222 (287)
T ss_dssp             BCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCcceEEEeccCCCCceeEEeCCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHH
Confidence            99999999999987776     99999999875433   233457899999999883  456788999999999999999


Q ss_pred             cCCCCcc----cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          164 KGKHPRH----FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       164 tg~~p~~----~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+.|..    .-..+........  ....+.+.+...+..+...|++
T Consensus       223 ~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  268 (287)
T 4f0f_A          223 TGEGPFDEYSYGKIKFINMIREEG--LRPTIPEDCPPRLRNVIELCWS  268 (287)
T ss_dssp             HSSCTTTTCCCCHHHHHHHHHHSC--CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             cCCCCCccccccHHHHHHHHhccC--CCCCCCcccCHHHHHHHHHHhc
Confidence            9999921    1112222222111  2333445555667777777765

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.85  E-value=1.4e-22  Score=167.22  Aligned_cols=78  Identities=24%  Similarity=0.286  Sum_probs=66.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......++..|+|||.+....++.++||||||++++||+| |+.
T Consensus       186 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  265 (333)
T 2i1m_A          186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN  265 (333)
T ss_dssp             ECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999986654321  1223456788999999988889999999999999999998 888


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       266 p  266 (333)
T 2i1m_A          266 P  266 (333)
T ss_dssp             S
T ss_pred             C
Confidence            8

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.85  E-value=9.5e-22  Score=161.14  Aligned_cols=82  Identities=24%  Similarity=0.291  Sum_probs=63.8

Q ss_pred             HHHhhh---h--hhcCcCCCceeeCCCCc-EEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHH
Q 039937           84 EKLLRQ---E--ISFTTSSKNGLLDLEYE-ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL  157 (208)
Q Consensus        84 ~~~Lh~---~--iH~dlk~~nilld~~~~-~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gv  157 (208)
                      ..+||.   .  +||||||+||+++.++. +||+|||++......   .....|+..|+|||.+....++.++||||||+
T Consensus       115 l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  191 (307)
T 2eva_A          115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI  191 (307)
T ss_dssp             HHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------------CCTTSSCHHHHTCCCCCTHHHHHHHHH
T ss_pred             HHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---cccCCCCCceEChhhhCCCCCCcHHHHHHHHH
Confidence            356666   3  99999999999988776 799999998765432   12345899999999998888999999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||++|+.|
T Consensus       192 il~el~~g~~p  202 (307)
T 2eva_A          192 ILWEVITRRKP  202 (307)
T ss_dssp             HHHHHHHTCCT
T ss_pred             HHHHHHHCCCC
Confidence            99999999999

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.85  E-value=4.2e-22  Score=170.85  Aligned_cols=84  Identities=21%  Similarity=0.275  Sum_probs=65.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----------------------CCccccccccccccccc
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----------------------SNRTELAGTYGYIALEL  140 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----------------------~~~~~~~g~~~y~aPE~  140 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++......                      .......||+.|+|||.
T Consensus       143 ~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  222 (432)
T 3n9x_A          143 NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL  222 (432)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHH
T ss_pred             HHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHH
Confidence            445544  999999999999999999999999998765431                      11245678999999998


Q ss_pred             c-ccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          141 T-YTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       141 ~-~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      + ....++.++||||+||+++||++|..|
T Consensus       223 ~~~~~~~~~~~DiwSlG~il~ell~g~~p  251 (432)
T 3n9x_A          223 ILLQENYTKSIDIWSTGCIFAELLNMLQS  251 (432)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred             HhcCCCCCcccccchHHHHHHHHHhcccc
Confidence            6 456689999999999999999986544

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.85  E-value=8.6e-22  Score=163.19  Aligned_cols=78  Identities=28%  Similarity=0.318  Sum_probs=64.0

Q ss_pred             hhcCcCCCceeeCCCC--cEEEcccceeeeecCCC----CCcccccccccccccccccc--CCcCcccchHHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEY--EARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYT--LKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        91 iH~dlk~~nilld~~~--~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +||||||+||+++.++  .+||+|||+++......    .......||+.|+|||.+..  ..++.++||||+|++++||
T Consensus       190 vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el  269 (345)
T 3hko_A          190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL  269 (345)
T ss_dssp             ECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHH
T ss_pred             cccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHH
Confidence            9999999999998766  89999999998765421    12234578999999998864  6788999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       270 ~~g~~p  275 (345)
T 3hko_A          270 LMGAVP  275 (345)
T ss_dssp             HHSSCS
T ss_pred             HHCCCC
Confidence            999999

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.85  E-value=1.3e-21  Score=158.54  Aligned_cols=78  Identities=23%  Similarity=0.268  Sum_probs=65.1

Q ss_pred             hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccccCC--cCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK--VAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++. ++.+||+|||+++.............|+..|+|||.+....  ++.++||||||++++||++|+.
T Consensus       144 ~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~  223 (295)
T 2clq_A          144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP  223 (295)
T ss_dssp             ECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSC
T ss_pred             EccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            99999999999987 89999999999987654332334457899999999986543  7889999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       224 p  224 (295)
T 2clq_A          224 P  224 (295)
T ss_dssp             T
T ss_pred             C
Confidence            9

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.85  E-value=8.8e-22  Score=166.10  Aligned_cols=77  Identities=21%  Similarity=0.158  Sum_probs=66.1

Q ss_pred             hhcCcCCCceeeC-CCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++ .++.+||+|||+++....... .....+++.|+|||.+... .++.++||||+|++++||++|+.|
T Consensus       163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  241 (383)
T 3eb0_A          163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL  241 (383)
T ss_dssp             ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence            9999999999998 689999999999987654422 2334678999999988754 489999999999999999999998

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.85  E-value=4.8e-22  Score=167.65  Aligned_cols=75  Identities=19%  Similarity=0.142  Sum_probs=66.5

Q ss_pred             hhcCcCCCceeeC--CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLD--LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld--~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+|||++  .++.+||+|||+++.....   .....+|+.|+|||.+....++.++||||+||+++||++|+.|
T Consensus       181 vHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  257 (382)
T 2vx3_A          181 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL  257 (382)
T ss_dssp             ECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EcCCCCcccEEEecCCCCcEEEEeccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999994  5788999999999876543   2345688999999999988899999999999999999999999

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.85  E-value=2.3e-21  Score=156.65  Aligned_cols=76  Identities=24%  Similarity=0.329  Sum_probs=67.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||++......  ......++..|+|||.+....++.++||||+|++++|+++|+.|
T Consensus       136 ~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  211 (284)
T 2vgo_A          136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP  211 (284)
T ss_dssp             ECCCCSGGGEEECTTCCEEECCCTTCEECSSS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             eecCCCHHHEEEcCCCCEEEecccccccCccc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCC
Confidence            99999999999999999999999998765432  12345689999999999888889999999999999999999999

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.85  E-value=1.7e-22  Score=168.11  Aligned_cols=79  Identities=18%  Similarity=0.273  Sum_probs=68.3

Q ss_pred             hhcCcCCCceeeCCCC--cEEEcccceeeeecCCC-------CCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEY--EARAFDFGIAKFFKLDS-------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        91 iH~dlk~~nilld~~~--~~kl~dfgl~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +||||||+||+++.++  .+||+|||+++......       .......|+..|+|||.+....++.++||||||++++|
T Consensus       173 vH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  252 (345)
T 2v62_A          173 VHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR  252 (345)
T ss_dssp             ECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             eCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence            9999999999998877  99999999998765331       11234578999999999988889999999999999999


Q ss_pred             HHcCCCCc
Q 039937          162 VMKGKHPR  169 (208)
Q Consensus       162 lltg~~p~  169 (208)
                      |++|+.|.
T Consensus       253 ll~g~~pf  260 (345)
T 2v62_A          253 WLCGKLPW  260 (345)
T ss_dssp             HHHSSCTT
T ss_pred             HHhCCCCc
Confidence            99999993

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.85  E-value=7.1e-22  Score=160.69  Aligned_cols=78  Identities=18%  Similarity=0.176  Sum_probs=68.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.+||+|||++........   ......++..|+|||.+....++.++||||+|++++|+++|+.
T Consensus       148 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  227 (302)
T 4e5w_A          148 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD  227 (302)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccC
Confidence            9999999999999999999999999987765421   2234467788999999988888999999999999999999998


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       228 p  228 (302)
T 4e5w_A          228 S  228 (302)
T ss_dssp             G
T ss_pred             C
Confidence            7

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.85  E-value=3.8e-22  Score=178.86  Aligned_cols=119  Identities=18%  Similarity=0.147  Sum_probs=81.4

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC---CCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      |||..  +||||||+|||++.++.+||+|||+++......   .......+++.|+|||.+....++.++||||||++++
T Consensus       484 yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~  563 (635)
T 4fl3_A          484 YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW  563 (635)
T ss_dssp             HHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHH
Confidence            44444  999999999999999999999999998765431   1122334678899999999889999999999999999


Q ss_pred             HHHc-CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++ |+.|.  ..-.+...... ..  ........+...+..+...|++
T Consensus       564 ellt~G~~Pf~~~~~~~~~~~i~-~~--~~~~~p~~~~~~l~~li~~cl~  610 (635)
T 4fl3_A          564 EAFSYGQKPYRGMKGSEVTAMLE-KG--ERMGCPAGCPREMYDLMNLCWT  610 (635)
T ss_dssp             HHHTTTCCSSTTCCHHHHHHHHH-TT--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHH-cC--CCCCCCCCCCHHHHHHHHHHcC
Confidence            9998 99992  22222222222 22  1122234455677777777765

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.85  E-value=2.4e-22  Score=166.23  Aligned_cols=114  Identities=11%  Similarity=0.072  Sum_probs=81.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++......  .......+++.|+|||.+....++.++||||||++++||++ |+.
T Consensus       196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999987654321  12234467889999999988889999999999999999999 998


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+...... +.. . ......+...+..+...|++
T Consensus       276 p~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~~l~~li~~~l~  314 (343)
T 1luf_A          276 PYYGMAHEEVIYYVR-DGN-I-LACPENCPLELYNLMRLCWS  314 (343)
T ss_dssp             TTTTSCHHHHHHHHH-TTC-C-CCCCTTCCHHHHHHHHHHTC
T ss_pred             cCCCCChHHHHHHHh-CCC-c-CCCCCCCCHHHHHHHHHHcc
Confidence            82  22222222222 221 1 12234455567777777765

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.85  E-value=2.1e-22  Score=177.24  Aligned_cols=114  Identities=16%  Similarity=0.172  Sum_probs=82.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+|||++.++.+||+|||+++..... ........++..|+|||.+....++.++||||||+++|||++ |+.|
T Consensus       385 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P  464 (535)
T 2h8h_A          385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  464 (535)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCS
T ss_pred             eCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999765432 111123345778999999988889999999999999999999 8888


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ....+....... .  ......+.+...+..+...|++
T Consensus       465 ~~~~~~~~~~~~i~~-~--~~~~~~~~~~~~l~~li~~cl~  502 (535)
T 2h8h_A          465 YPGMVNREVLDQVER-G--YRMPCPPECPESLHDLMCQCWR  502 (535)
T ss_dssp             STTCCHHHHHHHHHT-T--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHc-C--CCCCCCCCCCHHHHHHHHHHcC
Confidence            2  222222222222 1  1122344555677777777865

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.85  E-value=6.6e-22  Score=161.93  Aligned_cols=111  Identities=14%  Similarity=0.161  Sum_probs=74.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++......  .......+++.|+|||.+....++.++||||||++++||++ |+.
T Consensus       169 vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  248 (313)
T 3brb_A          169 LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMT  248 (313)
T ss_dssp             CCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999998765431  12233456788999999988889999999999999999999 777


Q ss_pred             C-----cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P-----RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p-----~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |     ...+...+....      .....+.+...+..+...|++
T Consensus       249 p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~  287 (313)
T 3brb_A          249 PYPGVQNHEMYDYLLHGH------RLKQPEDCLDELYEIMYSCWR  287 (313)
T ss_dssp             SSTTCCGGGHHHHHHTTC------CCCCBTTCCHHHHHHHHHTTC
T ss_pred             CCccCCHHHHHHHHHcCC------CCCCCccccHHHHHHHHHHcC
Confidence            7     122333222211      112234455566777777764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.85  E-value=9.9e-22  Score=158.11  Aligned_cols=82  Identities=20%  Similarity=0.251  Sum_probs=68.5

Q ss_pred             HHhhhh--hhcCcCCCceee---CCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLL---DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nill---d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      ++||..  +||||||+||++   +.++.+|++|||++....... ......+++.|+|||.+.. .++.++||||+|+++
T Consensus       120 ~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l  197 (277)
T 3f3z_A          120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMM  197 (277)
T ss_dssp             HHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHH
T ss_pred             HHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-chhccCCCCCccChHHhcc-cCCchhhehhHHHHH
Confidence            344444  999999999999   888999999999998765432 2234568999999998764 489999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +|+++|+.|
T Consensus       198 ~~l~~g~~p  206 (277)
T 3f3z_A          198 YVLLCGYPP  206 (277)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHHCCCC
Confidence            999999999

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.85  E-value=9.5e-22  Score=159.31  Aligned_cols=76  Identities=30%  Similarity=0.446  Sum_probs=60.5

Q ss_pred             hhcCcCCCceee---CCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLL---DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nill---d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||++   +.++.+||+|||++....... ......+++.|+|||.+. ..++.++||||+|++++||++|+.
T Consensus       146 vH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~  223 (285)
T 3is5_A          146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCL  223 (285)
T ss_dssp             CCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             EECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCC
Confidence            999999999999   456889999999997655432 223456899999999875 567899999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       224 p  224 (285)
T 3is5_A          224 P  224 (285)
T ss_dssp             S
T ss_pred             C
Confidence            9

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.85  E-value=1.4e-21  Score=169.70  Aligned_cols=83  Identities=20%  Similarity=0.293  Sum_probs=70.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~e  161 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++...... ......||+.|+|||.+....+ +.++||||+|++++|
T Consensus       130 ~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  208 (476)
T 2y94_A          130 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA  208 (476)
T ss_dssp             HHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHH
Confidence            344444  999999999999999999999999998765432 2334578999999999887655 689999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       209 lltG~~P  215 (476)
T 2y94_A          209 LLCGTLP  215 (476)
T ss_dssp             HHHSSCS
T ss_pred             HhhCCCC
Confidence            9999999

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.85  E-value=3.4e-22  Score=163.21  Aligned_cols=111  Identities=17%  Similarity=0.214  Sum_probs=81.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......+++.|+|||.+....++.++||||+|++++||+| |+.
T Consensus       167 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  246 (313)
T 1t46_A          167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS  246 (313)
T ss_dssp             CCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999987654422  1223456788999999988889999999999999999999 888


Q ss_pred             Cc------ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR------HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~------~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.      ..+...+...      ........+...+..+...|++
T Consensus       247 p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l~  286 (313)
T 1t46_A          247 PYPGMPVDSKFYKMIKEG------FRMLSPEHAPAEMYDIMKTCWD  286 (313)
T ss_dssp             SSTTCCSSHHHHHHHHHT------CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCcccchhHHHHHhccC------CCCCCcccCCHHHHHHHHHHcC
Confidence            82      1222222222      1122234455566677777764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=3e-22  Score=166.01  Aligned_cols=111  Identities=17%  Similarity=0.185  Sum_probs=81.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||++........  ......+++.|+|||.+....++.++||||||++++||+| |+.
T Consensus       194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  273 (344)
T 1rjb_A          194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN  273 (344)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999987654422  1223456788999999988889999999999999999998 988


Q ss_pred             Cc------ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR------HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~------~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.      ..+...+...      ........+...+..+...|++
T Consensus       274 p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l~  313 (344)
T 1rjb_A          274 PYPGIPVDANFYKLIQNG------FKMDQPFYATEEIYIIMQSCWA  313 (344)
T ss_dssp             SSTTCCCSHHHHHHHHTT------CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CcccCCcHHHHHHHHhcC------CCCCCCCCCCHHHHHHHHHHcC
Confidence            82      1222222222      1122234455567777777764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.84  E-value=4.1e-22  Score=161.14  Aligned_cols=115  Identities=15%  Similarity=0.094  Sum_probs=81.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||||+||+++.++.+||+|||++........   ......++..|+|||.+....++.++||||+|++++|+++ |+
T Consensus       143 ~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  222 (291)
T 1u46_A          143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ  222 (291)
T ss_dssp             ECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999987654321   1223456778999999988888999999999999999999 99


Q ss_pred             CCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          167 HPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|.  ....+.........  ........+...+..+...|++
T Consensus       223 ~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  263 (291)
T 1u46_A          223 EPWIGLNGSQILHKIDKEG--ERLPRPEDCPQDIYNVMVQCWA  263 (291)
T ss_dssp             CTTTTCCHHHHHHHHHTSC--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCcccCCHHHHHHHHHccC--CCCCCCcCcCHHHHHHHHHHcc
Confidence            982  23333333333322  1122234555667777777764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.84  E-value=4.2e-22  Score=163.60  Aligned_cols=114  Identities=10%  Similarity=0.007  Sum_probs=80.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......+++.|+|||.+....++.++||||+|++++|+++ |+.
T Consensus       160 ~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  239 (322)
T 1p4o_A          160 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ  239 (322)
T ss_dssp             BCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             ccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999876543311  1223356788999999988889999999999999999999 788


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+.........  . ......+...+..+...|++
T Consensus       240 p~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~l~~li~~~l~  278 (322)
T 1p4o_A          240 PYQGLSNEQVLRFVMEGG--L-LDKPDNCPDMLFELMRMCWQ  278 (322)
T ss_dssp             TTTTSCHHHHHHHHHTTC--C-CCCCTTCCHHHHHHHHHHTC
T ss_pred             ccccCCHHHHHHHHHcCC--c-CCCCCCCCHHHHHHHHHHcC
Confidence            72  22223332222221  1 11233445566666666654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.84  E-value=2.7e-21  Score=158.37  Aligned_cols=120  Identities=15%  Similarity=0.107  Sum_probs=77.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-----CCCcccccccccccccccccc---------CCcCc
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-----SSNRTELAGTYGYIALELTYT---------LKVAK  148 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~  148 (208)
                      .+||..  +||||||+||+++ ++.+||+|||++......     ........|+..|+|||.+..         ..++.
T Consensus       144 ~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~  222 (319)
T 2y4i_B          144 GYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSK  222 (319)
T ss_dssp             HHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCH
T ss_pred             HHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCc
Confidence            345544  9999999999998 679999999997754321     122234468899999998864         34688


Q ss_pred             ccchHHHHHHHHHHHcCCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          149 KCGMHSSGLLALEVMKGKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       149 ~~Dv~S~Gvvl~elltg~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++||||||++++|+++|+.|.  ..............  ........+...+..+...|++
T Consensus       223 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  281 (319)
T 2y4i_B          223 HSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM--KPNLSQIGMGKEISDILLFCWA  281 (319)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTC--CCCCCCSSCCTTHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCC--CCCCCcCCCCHHHHHHHHHHhc
Confidence            999999999999999999992  22222222222221  2222233444566666666654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.84  E-value=4.7e-22  Score=164.35  Aligned_cols=84  Identities=21%  Similarity=0.184  Sum_probs=64.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.............++..|+|||.+... .++.++||||+|++++|
T Consensus       138 ~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~  217 (331)
T 4aaa_A          138 GFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTE  217 (331)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHH
Confidence            344444  999999999999999999999999998765443333445789999999988764 67899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       218 l~~g~~p  224 (331)
T 4aaa_A          218 MFMGEPL  224 (331)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999998

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.84  E-value=8.9e-22  Score=163.84  Aligned_cols=84  Identities=18%  Similarity=0.190  Sum_probs=69.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CCCcccccccccccccccccc-CCcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gv  157 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.....    ........||+.|+|||.+.. ..++.++||||+|+
T Consensus       138 ~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~  217 (351)
T 3mi9_A          138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGC  217 (351)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHH
T ss_pred             HHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHH
Confidence            344444  99999999999999999999999999876532    222344578999999998875 45789999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||++|+.|
T Consensus       218 il~ell~g~~p  228 (351)
T 3mi9_A          218 IMAEMWTRSPI  228 (351)
T ss_dssp             HHHHHHHSSCS
T ss_pred             HHHHHHhCCCC
Confidence            99999999998

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.84  E-value=8e-22  Score=168.53  Aligned_cols=83  Identities=25%  Similarity=0.309  Sum_probs=61.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCC---CcEEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLE---YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSG  156 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~---~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~G  156 (208)
                      +|||..  +||||||+|||++.+   ..+||+|||+++...... ......||+.|+|||.+.   ...++.++||||+|
T Consensus       253 ~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG  331 (419)
T 3i6u_A          253 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG  331 (419)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHH
T ss_pred             HHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCc-cccccCCCCCccCceeeecCCCCCCCchhhhHhHH
Confidence            455554  999999999999654   459999999998765432 223457899999999875   35678899999999


Q ss_pred             HHHHHHHcCCCC
Q 039937          157 LLALEVMKGKHP  168 (208)
Q Consensus       157 vvl~elltg~~p  168 (208)
                      ++++||++|+.|
T Consensus       332 ~il~~lltg~~p  343 (419)
T 3i6u_A          332 VILFICLSGYPP  343 (419)
T ss_dssp             HHHHHHHHSSCS
T ss_pred             HHHHHHHHCCCC
Confidence            999999999999

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.84  E-value=7.6e-22  Score=176.29  Aligned_cols=116  Identities=20%  Similarity=0.250  Sum_probs=81.0

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      |||..  +||||||+|||++.++.+||+|||+++.......   ......+++.|+|||.+....++.++|||||||++|
T Consensus       451 ~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~  530 (613)
T 2ozo_A          451 YLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW  530 (613)
T ss_dssp             HHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHH
Confidence            44443  9999999999999999999999999986643311   112233567899999998889999999999999999


Q ss_pred             HHHc-CCCCc-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHPR-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++ |+.|.     ..+.+.+..    +  ......+.+...+..+...|++
T Consensus       531 ellt~G~~Pf~~~~~~~~~~~i~~----~--~~~~~p~~~~~~l~~li~~cl~  577 (613)
T 2ozo_A          531 EALSYGQKPYKKMKGPEVMAFIEQ----G--KRMECPPECPPELYALMSDCWI  577 (613)
T ss_dssp             HHHTTSCCTTTTCCSHHHHHHHHT----T--CCCCCCTTCCHHHHHHHHHTTC
T ss_pred             HHHHCCCCCCCCCCHHHHHHHHHc----C--CCCCCCCcCCHHHHHHHHHHcC
Confidence            9998 99992     223333322    1  1122344556677778888865

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.84  E-value=3.3e-22  Score=162.65  Aligned_cols=83  Identities=24%  Similarity=0.286  Sum_probs=64.6

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGLL  158 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gvv  158 (208)
                      +||..  +||||||+||+++.++.+||+|||++..............++..|+|||.+.     ...++.++||||+|++
T Consensus       132 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i  211 (302)
T 2j7t_A          132 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT  211 (302)
T ss_dssp             HHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHH
T ss_pred             HHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHH
Confidence            44444  9999999999999999999999998754322111122346889999999873     5667899999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++||++|+.|
T Consensus       212 l~~l~~g~~p  221 (302)
T 2j7t_A          212 LIEMAQIEPP  221 (302)
T ss_dssp             HHHHHHSSCT
T ss_pred             HHHHhcCCCC
Confidence            9999999999

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.84  E-value=9e-22  Score=164.88  Aligned_cols=83  Identities=22%  Similarity=0.266  Sum_probs=69.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC---CCCcccccccccccccccccc-CCcCcccchHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLA  159 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl  159 (208)
                      +||..  +||||||+||+++.++.+||+|||+++.....   ........||+.|+|||.+.. ..++.++||||+|+++
T Consensus       143 ~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  222 (364)
T 3qyz_A          143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL  222 (364)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHH
T ss_pred             HHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHH
Confidence            44444  99999999999999999999999999876543   122344578999999998654 4578999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       223 ~ell~g~~p  231 (364)
T 3qyz_A          223 AEMLSNRPI  231 (364)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHHCCCC
Confidence            999999998

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.84  E-value=7.1e-22  Score=162.92  Aligned_cols=78  Identities=21%  Similarity=0.230  Sum_probs=67.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......   ......++..|+|||.+....++.++||||+|++++|+++|+.
T Consensus       149 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~  228 (327)
T 3lxl_A          149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD  228 (327)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999987754321   2233457788999999988888999999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       229 p  229 (327)
T 3lxl_A          229 K  229 (327)
T ss_dssp             G
T ss_pred             C
Confidence            8

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.84  E-value=5.1e-22  Score=167.23  Aligned_cols=74  Identities=12%  Similarity=-0.020  Sum_probs=65.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-----------CcCcccchHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-----------KVAKKCGMHSSGLLA  159 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~S~Gvvl  159 (208)
                      +||||||+|||++.++.+||+|||+++....   ......| +.|+|||.+...           .++.++||||||+++
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il  303 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI  303 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence            9999999999999999999999999986432   2234466 999999998876           789999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       304 ~elltg~~P  312 (377)
T 3byv_A          304 YWIWCADLP  312 (377)
T ss_dssp             HHHHHSSCC
T ss_pred             HHHHHCCCC
Confidence            999999999

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.84  E-value=6e-22  Score=162.71  Aligned_cols=79  Identities=19%  Similarity=0.254  Sum_probs=67.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC------------CCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS------------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      +||||||+||+++.++.+||+|||+++......            .......||+.|+|||.+....++.++||||+|++
T Consensus       186 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  265 (332)
T 3qd2_B          186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLI  265 (332)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHH
T ss_pred             eecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHH
Confidence            999999999999999999999999998776541            11234568999999999988889999999999999


Q ss_pred             HHHHHcCCCCc
Q 039937          159 ALEVMKGKHPR  169 (208)
Q Consensus       159 l~elltg~~p~  169 (208)
                      ++||++|..|.
T Consensus       266 l~el~~~~~~~  276 (332)
T 3qd2_B          266 LFELLYSFSTQ  276 (332)
T ss_dssp             HHHHHSCCCCH
T ss_pred             HHHHHHcCCCh
Confidence            99999999883

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.84  E-value=9.6e-22  Score=161.60  Aligned_cols=77  Identities=21%  Similarity=0.217  Sum_probs=66.9

Q ss_pred             hhcCcCCCceee----CCCCcEEEcccceeeeecCCCCCccccccccccccccccc--------cCCcCcccchHHHHHH
Q 039937           91 ISFTTSSKNGLL----DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY--------TLKVAKKCGMHSSGLL  158 (208)
Q Consensus        91 iH~dlk~~nill----d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~S~Gvv  158 (208)
                      +||||||+||++    +.++.+||+|||+++....... .....||..|+|||.+.        ...++.++||||+|++
T Consensus       134 vH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~i  212 (319)
T 4euu_A          134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (319)
T ss_dssp             ECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHH
T ss_pred             ecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHH
Confidence            999999999999    8888999999999987765432 23456899999999875        4678899999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      ++||++|+.|
T Consensus       213 l~el~~g~~p  222 (319)
T 4euu_A          213 FYHAATGSLP  222 (319)
T ss_dssp             HHHHHHSSCS
T ss_pred             HHHHHhCCCC
Confidence            9999999999

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.84  E-value=1.7e-21  Score=169.61  Aligned_cols=82  Identities=27%  Similarity=0.406  Sum_probs=67.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCC---CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDL---EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~---~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||..  +||||||+||+++.   ++.+||+|||+++...... ......||+.|+|||.+. ..++.++||||+||++
T Consensus       150 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il  227 (494)
T 3lij_A          150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVIL  227 (494)
T ss_dssp             HHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHH
T ss_pred             HHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHH
Confidence            455554  99999999999976   4559999999998776442 223457899999999876 5689999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      |+|++|+.|
T Consensus       228 ~~ll~g~~p  236 (494)
T 3lij_A          228 FILLAGYPP  236 (494)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.84  E-value=2.7e-21  Score=156.63  Aligned_cols=112  Identities=17%  Similarity=0.153  Sum_probs=81.9

Q ss_pred             hhcCcCCCceeeC-CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCc
Q 039937           91 ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~  169 (208)
                      +||||||+||+++ .++.+||+|||++......  ......|++.|+|||.+. +.++.++||||+|+++++|++|+.|.
T Consensus       153 ~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf  229 (290)
T 1t4h_A          153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPY  229 (290)
T ss_dssp             CCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             EECCCCHHHEEEECCCCCEEEeeCCCccccccc--ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCC
Confidence            8999999999998 7899999999998654332  233456899999999776 56899999999999999999999992


Q ss_pred             ---ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 ---HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 ---~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                         ....+.........  .....+......+..+...|++
T Consensus       230 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~  268 (290)
T 1t4h_A          230 SECQNAAQIYRRVTSGV--KPASFDKVAIPEVKEIIEGCIR  268 (290)
T ss_dssp             TTCSSHHHHHHHHTTTC--CCGGGGGCCCHHHHHHHHHHSC
T ss_pred             CCcCcHHHHHHHHhccC--CccccCCCCCHHHHHHHHHHcc
Confidence               33344443333322  2333444444566777777765

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.84  E-value=1.6e-21  Score=160.68  Aligned_cols=122  Identities=21%  Similarity=0.222  Sum_probs=66.5

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccc----ccCCcCcccchHHHHH
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELT----YTLKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~S~Gv  157 (208)
                      .+||..   +||||||+||+++.++.+||+|||+++...... ......|+..|+|||.+    ....++.++||||||+
T Consensus       139 ~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~  217 (327)
T 3aln_A          139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGI  217 (327)
T ss_dssp             HHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------------------------------CCSHHHHHHHHH
T ss_pred             HHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHH
Confidence            345543   999999999999999999999999987665432 12234688999999998    4566889999999999


Q ss_pred             HHHHHHcCCCCccc---HHHHHHhhcCCCC-CCccccCCCCCchHHHHhccccC
Q 039937          158 LALEVMKGKHPRHF---IFSICSSSSNFVI-APHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       158 vl~elltg~~p~~~---l~~~~~~~~~~~~-~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +++||++|+.|...   ..+.......... .+.....+.+...+..+...|++
T Consensus       218 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  271 (327)
T 3aln_A          218 TLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLT  271 (327)
T ss_dssp             HHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTC
T ss_pred             HHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhh
Confidence            99999999999332   2222222222110 01111223455577778878865

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.84  E-value=2.3e-21  Score=162.76  Aligned_cols=77  Identities=26%  Similarity=0.410  Sum_probs=66.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc------CCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT------LKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||.||+++.++.+|++|||++....... ......||+.|+|||.+..      ..++.++||||+|++++||++
T Consensus       222 ~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~  300 (365)
T 2y7j_A          222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA  300 (365)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCCCCEEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHH
Confidence            999999999999999999999999998765442 2234578999999998753      357889999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       301 g~~p  304 (365)
T 2y7j_A          301 GSPP  304 (365)
T ss_dssp             SSCS
T ss_pred             CCCC
Confidence            9999

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.84  E-value=5e-21  Score=155.88  Aligned_cols=83  Identities=17%  Similarity=0.197  Sum_probs=68.2

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCC--cCcccchHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLK--VAKKCGMHSSGLLA  159 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl  159 (208)
                      +||..  +||||||+||+++.++.+|++|||++......  ........++..|+|||.+....  .+.++||||+|+++
T Consensus       124 ~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  203 (305)
T 2wtk_C          124 YLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL  203 (305)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHH
T ss_pred             HHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHH
Confidence            44444  99999999999999999999999999876543  22223456899999999887533  36799999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       204 ~~l~~g~~p  212 (305)
T 2wtk_C          204 YNITTGLYP  212 (305)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.84  E-value=1.7e-21  Score=159.16  Aligned_cols=111  Identities=15%  Similarity=0.249  Sum_probs=82.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......+++.|+|||.+....++.++||||+|++++||++ |+.
T Consensus       172 vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  251 (314)
T 2ivs_A          172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN  251 (314)
T ss_dssp             ECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999987654321  1223356788999999988888999999999999999999 888


Q ss_pred             Cc-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.     ..+.+.+....      .......+...+..+...|++
T Consensus       252 p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~  290 (314)
T 2ivs_A          252 PYPGIPPERLFNLLKTGH------RMERPDNCSEEMYRLMLQCWK  290 (314)
T ss_dssp             SSTTCCGGGHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHhhcCC------cCCCCccCCHHHHHHHHHHcc
Confidence            82     23333332221      122234555667777777764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.84  E-value=3.6e-22  Score=163.28  Aligned_cols=78  Identities=22%  Similarity=0.306  Sum_probs=67.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......+++.|+|||.+....++.++||||+|++++|++| |+.
T Consensus       170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~  249 (316)
T 2xir_A          170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  249 (316)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999986654322  1223457889999999988889999999999999999998 988


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       250 p  250 (316)
T 2xir_A          250 P  250 (316)
T ss_dssp             S
T ss_pred             C
Confidence            8

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.84  E-value=1e-21  Score=165.10  Aligned_cols=83  Identities=22%  Similarity=0.203  Sum_probs=62.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++...... ......||+.|+|||.+....++.++||||+|++++||
T Consensus       141 ~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  219 (371)
T 2xrw_A          141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  219 (371)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHH
Confidence            344544  999999999999999999999999998665331 22345789999999999888899999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       220 ~~g~~p  225 (371)
T 2xrw_A          220 IKGGVL  225 (371)
T ss_dssp             HHSSCS
T ss_pred             HhCCCC
Confidence            999998

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.84  E-value=4.9e-22  Score=164.35  Aligned_cols=84  Identities=17%  Similarity=0.106  Sum_probs=62.4

Q ss_pred             HHhhhh--hhcCcCCCceee-----CCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLL-----DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSG  156 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nill-----d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~G  156 (208)
                      ++||..  +||||||+||++     +..+.+||+|||+++.............+|..|+|||.+... .++.++||||+|
T Consensus       146 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  225 (329)
T 3gbz_A          146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIA  225 (329)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             HHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHH
Confidence            345544  999999999999     556679999999998765443333445679999999998764 479999999999


Q ss_pred             HHHHHHHcCCCC
Q 039937          157 LLALEVMKGKHP  168 (208)
Q Consensus       157 vvl~elltg~~p  168 (208)
                      ++++||++|+.|
T Consensus       226 ~il~ell~g~~p  237 (329)
T 3gbz_A          226 CIWAEMLMKTPL  237 (329)
T ss_dssp             HHHHHHHHSSCS
T ss_pred             HHHHHHHHCCCC
Confidence            999999999998

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.84  E-value=2.5e-21  Score=162.71  Aligned_cols=81  Identities=21%  Similarity=0.296  Sum_probs=65.6

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.....   .....+|+.|+|||.+.. ..++.++||||+|++++|
T Consensus       158 ~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  234 (371)
T 4exu_A          158 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE  234 (371)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHH
T ss_pred             HHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHH
Confidence            345544  99999999999999999999999999865433   233567999999998876 678999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       235 l~~g~~p  241 (371)
T 4exu_A          235 MLTGKTL  241 (371)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999999

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.84  E-value=2.2e-21  Score=156.38  Aligned_cols=77  Identities=22%  Similarity=0.328  Sum_probs=64.5

Q ss_pred             hhcCcCCCceeeCCCC----cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCC
Q 039937           91 ISFTTSSKNGLLDLEY----EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~----~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~  166 (208)
                      +||||||+||+++.++    .+||+|||++........ .....+++.|+|||.+....++.++||||+|++++|+++|+
T Consensus       130 ~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  208 (283)
T 3bhy_A          130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA  208 (283)
T ss_dssp             ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCChHHEEEecCCCCCCceEEEecccceeccCCCc-ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCC
Confidence            9999999999998877    899999999987654322 23346889999999998888999999999999999999999


Q ss_pred             CC
Q 039937          167 HP  168 (208)
Q Consensus       167 ~p  168 (208)
                      .|
T Consensus       209 ~p  210 (283)
T 3bhy_A          209 SP  210 (283)
T ss_dssp             CT
T ss_pred             CC
Confidence            99

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.84  E-value=1.8e-21  Score=160.36  Aligned_cols=107  Identities=20%  Similarity=0.228  Sum_probs=78.7

Q ss_pred             hhcCcCCCceeeC-CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++ .++.+||+|||+++.....  ......|++.|+|||.+..... +.++||||||++++||++|+.|
T Consensus       171 vH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p  248 (320)
T 3a99_A          171 LHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP  248 (320)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             EeCCCCHHHEEEeCCCCCEEEeeCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCC
Confidence            9999999999999 7899999999999876543  2233568999999998876665 6889999999999999999999


Q ss_pred             cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ............        ...+.+...+..+...|++
T Consensus       249 f~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~  279 (320)
T 3a99_A          249 FEHDEEIIRGQV--------FFRQRVSSECQHLIRWCLA  279 (320)
T ss_dssp             CCSHHHHHHCCC--------CCSSCCCHHHHHHHHHHTC
T ss_pred             CCChhhhhcccc--------cccccCCHHHHHHHHHHcc
Confidence            444333222111        1223444555666666654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.84  E-value=1.7e-21  Score=156.40  Aligned_cols=84  Identities=25%  Similarity=0.364  Sum_probs=69.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCc-CcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl  159 (208)
                      ++||..  +||||||+||+++.++.+|++|||.+......  ........++..|+|||.+..... +.++||||+|+++
T Consensus       119 ~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  198 (276)
T 2yex_A          119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL  198 (276)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHH
T ss_pred             HHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHH
Confidence            345544  99999999999999999999999999865433  122334578999999999876664 6889999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +|+++|+.|
T Consensus       199 ~~l~~g~~p  207 (276)
T 2yex_A          199 TAMLAGELP  207 (276)
T ss_dssp             HHHHHSSCC
T ss_pred             HHHHhCCCC
Confidence            999999999

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.84  E-value=1.4e-21  Score=160.92  Aligned_cols=83  Identities=18%  Similarity=0.222  Sum_probs=69.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC-cEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~  160 (208)
                      ++||..  +||||||+||+++.++ .+||+|||+++....... .....++..|+|||.+.. ..++.++||||+|++++
T Consensus       144 ~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  222 (330)
T 3nsz_A          144 DYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA  222 (330)
T ss_dssp             HHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             HHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHH
Confidence            445544  9999999999999776 899999999987654422 234568899999999876 66889999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       223 ~ll~g~~p  230 (330)
T 3nsz_A          223 SMIFRKEP  230 (330)
T ss_dssp             HHHHTCSS
T ss_pred             HHHhCCCC
Confidence            99999998

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=2.2e-21  Score=157.04  Aligned_cols=114  Identities=19%  Similarity=0.190  Sum_probs=82.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||||+||+++.++.+||+|||++........   ......+++.|+|||.+....++.++||||+|++++|+++ |+
T Consensus       132 ~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  211 (287)
T 1u59_A          132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ  211 (287)
T ss_dssp             ECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             eeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999987754321   1223346788999999988888999999999999999998 99


Q ss_pred             CCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          167 HPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|..  ...+........   .....++.+...+..+...|++
T Consensus       212 ~p~~~~~~~~~~~~i~~~---~~~~~~~~~~~~l~~li~~~l~  251 (287)
T 1u59_A          212 KPYKKMKGPEVMAFIEQG---KRMECPPECPPELYALMSDCWI  251 (287)
T ss_dssp             CTTTTCCTHHHHHHHHTT---CCCCCCTTCCHHHHHHHHHTTC
T ss_pred             CCcccCCHHHHHHHHhcC---CcCCCCCCcCHHHHHHHHHHcC
Confidence            9921  111222211111   1122345556677777777764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.84  E-value=1e-21  Score=156.95  Aligned_cols=114  Identities=19%  Similarity=0.174  Sum_probs=80.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+||+++.++.+|++|||++...... ........++..|+|||.+....++.++||||+|++++|+++ |+.|
T Consensus       126 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p  205 (267)
T 3t9t_A          126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP  205 (267)
T ss_dssp             CCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCC
Confidence            99999999999999999999999998765432 111223456778999999988888999999999999999999 8888


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ....+........   ............+..+...|++
T Consensus       206 ~~~~~~~~~~~~i~~~---~~~~~~~~~~~~l~~li~~~l~  243 (267)
T 3t9t_A          206 YENRSNSEVVEDISTG---FRLYKPRLASTHVYQIMNHCWR  243 (267)
T ss_dssp             TTTCCHHHHHHHHHTT---CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHhcC---CcCCCCccCcHHHHHHHHHHcc
Confidence            2  2223333222221   1122233344466667777764

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=1.2e-21  Score=164.67  Aligned_cols=81  Identities=21%  Similarity=0.289  Sum_probs=69.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.....   .....+|+.|+|||.+.. ..++.++||||+||+++|
T Consensus       142 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  218 (367)
T 1cm8_A          142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE  218 (367)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHH
T ss_pred             HHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHH
Confidence            344444  99999999999999999999999999876533   234567999999998876 678999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       219 ll~g~~p  225 (367)
T 1cm8_A          219 MITGKTL  225 (367)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999998

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.84  E-value=9e-22  Score=159.69  Aligned_cols=114  Identities=18%  Similarity=0.139  Sum_probs=80.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC---ccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GK  166 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~  166 (208)
                      +||||||+||+++.++.+||+|||++.........   .....++..|+|||.+....++.++||||+|++++|+++ |+
T Consensus       139 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  218 (291)
T 1xbb_A          139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ  218 (291)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             EcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999876543211   122345678999999988888999999999999999999 99


Q ss_pred             CCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          167 HPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       167 ~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .|..  .-.+...... ..  ......+.+...+..+...|++
T Consensus       219 ~p~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~li~~~l~  258 (291)
T 1xbb_A          219 KPYRGMKGSEVTAMLE-KG--ERMGCPAGCPREMYDLMNLCWT  258 (291)
T ss_dssp             CSSTTCCHHHHHHHHH-TT--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCCHHHHHHHHH-cC--CCCCCCCCCCHHHHHHHHHHcC
Confidence            9921  2222222111 11  1112244555567777777764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.84  E-value=4.6e-22  Score=160.08  Aligned_cols=114  Identities=18%  Similarity=0.150  Sum_probs=80.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCcc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRH  170 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~  170 (208)
                      +||||||+||+++.++.+||+|||+++.............++..|+|||.+....++.++||||+|++++||++|+.|..
T Consensus       138 vH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  217 (279)
T 2w5a_A          138 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT  217 (279)
T ss_dssp             CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             EEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence            89999999999999999999999998765543222234568899999999988888999999999999999999999922


Q ss_pred             --cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          171 --FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       171 --~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                        ...+...... ..  ....+.......+..+...|++
T Consensus       218 ~~~~~~~~~~i~-~~--~~~~~~~~~~~~l~~li~~~l~  253 (279)
T 2w5a_A          218 AFSQKELAGKIR-EG--KFRRIPYRYSDELNEIITRMLN  253 (279)
T ss_dssp             CSSHHHHHHHHH-HT--CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             ccCHHHHHHHHh-hc--ccccCCcccCHHHHHHHHHHcC
Confidence              2222222211 11  1122344555667777777765

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.84  E-value=2e-21  Score=168.74  Aligned_cols=82  Identities=23%  Similarity=0.454  Sum_probs=66.2

Q ss_pred             HHhhhh--hhcCcCCCceeeC---CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLD---LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld---~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||..  +||||||+||+++   .++.+||+|||+++...... ......||+.|+|||.+.. .++.++||||+|+++
T Consensus       135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il  212 (486)
T 3mwu_A          135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVIL  212 (486)
T ss_dssp             HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHH
T ss_pred             HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHH
Confidence            345544  9999999999995   45679999999987654432 2234578999999998864 588999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      ++|++|+.|
T Consensus       213 ~~ll~g~~p  221 (486)
T 3mwu_A          213 YILLSGTPP  221 (486)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.84  E-value=1.9e-21  Score=158.75  Aligned_cols=81  Identities=22%  Similarity=0.288  Sum_probs=68.6

Q ss_pred             Hhhhh--hhcCcCCCceee---CCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLL---DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nill---d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +||..  +||||||+||++   +.++.+|++|||+++.....  ......|++.|+|||.+....++.++||||+|++++
T Consensus       121 ~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  198 (304)
T 2jam_A          121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITY  198 (304)
T ss_dssp             HHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHH
T ss_pred             HHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHH
Confidence            44444  999999999999   78899999999998754322  223346899999999998888999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      |+++|+.|
T Consensus       199 ~l~~g~~p  206 (304)
T 2jam_A          199 ILLCGYPP  206 (304)
T ss_dssp             HHHHSSCT
T ss_pred             HHHHCCCC
Confidence            99999999

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.84  E-value=3.5e-21  Score=153.86  Aligned_cols=110  Identities=15%  Similarity=0.096  Sum_probs=78.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCc---ccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAK---KCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.+++.||++......     ....+|+.|+|||.+.....+.   ++||||+|++++|+++|+.
T Consensus       135 ~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  209 (271)
T 3kmu_A          135 PRHALNSRSVMIDEDMTARISMADVKFSFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV  209 (271)
T ss_dssp             TTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSC
T ss_pred             ecCCCccceEEEcCCcceeEEeccceeeecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            8999999999999999999999887654322     2346789999999987655444   7999999999999999999


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+.........  ....+.+.+...+..+...|++
T Consensus       210 p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~  249 (271)
T 3kmu_A          210 PFADLSNMEIGMKVALEG--LRPTIPPGISPHVSKLMKICMN  249 (271)
T ss_dssp             TTTTSCHHHHHHHHHHSC--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CccccChHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHHcC
Confidence            92  22223323332222  2233445556677777777765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.84  E-value=3.6e-21  Score=154.90  Aligned_cols=80  Identities=23%  Similarity=0.239  Sum_probs=69.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCCcc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPRH  170 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~  170 (208)
                      +||||||+||+++.++.+||+|||++........ .....+++.|+|||.+....++.++||||+|++++||++|..|..
T Consensus       144 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          144 INRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             eeccCCHHHEEEcCCCCEEECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence            9999999999999999999999999987654422 233468999999999988888999999999999999999999843


Q ss_pred             c
Q 039937          171 F  171 (208)
Q Consensus       171 ~  171 (208)
                      .
T Consensus       223 ~  223 (284)
T 2a19_B          223 E  223 (284)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.84  E-value=1.3e-21  Score=163.42  Aligned_cols=83  Identities=22%  Similarity=0.291  Sum_probs=68.8

Q ss_pred             HHHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           84 EKLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..+||..   +||||||+||+++.++.+||+|||++.......  .....|++.|+|||.+....++.++||||+|++++
T Consensus       144 l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  221 (360)
T 3eqc_A          144 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV  221 (360)
T ss_dssp             HHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc--ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHH
Confidence            3455542   899999999999999999999999986543221  12346899999999999888999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       222 ~l~~g~~p  229 (360)
T 3eqc_A          222 EMAVGRYP  229 (360)
T ss_dssp             HHHHTSCC
T ss_pred             HHHhCCCC
Confidence            99999998

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.83  E-value=2.1e-21  Score=162.09  Aligned_cols=83  Identities=24%  Similarity=0.233  Sum_probs=61.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++...... ......+++.|+|||.+.. ..++.++||||+|++++|
T Consensus       148 ~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  226 (362)
T 3pg1_A          148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE  226 (362)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHH
Confidence            344444  999999999999999999999999997654332 2234568899999998875 678899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      +++|+.|
T Consensus       227 l~~g~~p  233 (362)
T 3pg1_A          227 MFNRKAL  233 (362)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999999

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.83  E-value=1.2e-21  Score=164.83  Aligned_cols=81  Identities=21%  Similarity=0.304  Sum_probs=60.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +|||..  +||||||+||+++.++.+||+|||+++.....   .....+|..|+|||.+.. ..++.++||||+||+++|
T Consensus       146 ~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  222 (367)
T 2fst_X          146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  222 (367)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECC------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHH
T ss_pred             HHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHH
Confidence            345544  99999999999999999999999999875432   234568999999998876 678899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       223 ll~g~~p  229 (367)
T 2fst_X          223 LLTGRTL  229 (367)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999998

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.83  E-value=1.6e-21  Score=161.33  Aligned_cols=114  Identities=16%  Similarity=0.135  Sum_probs=81.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......+++.|+|||.+....++.++||||+|++++||++ |+.
T Consensus       179 vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  258 (334)
T 2pvf_A          179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS  258 (334)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999987654321  1223356788999999988888999999999999999999 888


Q ss_pred             Cc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.  ....+.........   .......+...+..+...|++
T Consensus       259 p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~  297 (334)
T 2pvf_A          259 PYPGIPVEELFKLLKEGH---RMDKPANCTNELYMMMRDCWH  297 (334)
T ss_dssp             SSTTCCHHHHHHHHHHTC---CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CcCcCCHHHHHHHHhcCC---CCCCCccCCHHHHHHHHHHcc
Confidence            82  22222222221111   111234455566667767764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.83  E-value=3.1e-21  Score=158.03  Aligned_cols=77  Identities=25%  Similarity=0.299  Sum_probs=59.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--Ccccccccccccccccccc-----------CCcCcccchHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYT-----------LKVAKKCGMHSSGL  157 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv  157 (208)
                      +||||||+||++++ +.+||+|||+++.......  ......|++.|+|||.+..           ..++.++||||+|+
T Consensus       149 vH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~  227 (313)
T 3cek_A          149 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  227 (313)
T ss_dssp             CCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHH
T ss_pred             eecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHH
Confidence            99999999999965 8999999999987654321  2234568999999998864           46788999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||++|+.|
T Consensus       228 il~el~~g~~p  238 (313)
T 3cek_A          228 ILYYMTYGKTP  238 (313)
T ss_dssp             HHHHHHHSSCT
T ss_pred             HHHHHHhCCCc
Confidence            99999999999

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.83  E-value=1.9e-21  Score=174.88  Aligned_cols=114  Identities=13%  Similarity=0.160  Sum_probs=78.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                      +||||||+|||++.++.+||+|||+++...... .......+++.|+|||.+....++.++||||||++++||++ |+.|
T Consensus       513 vHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             CCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999998765432 11223356788999999988889999999999999999997 8888


Q ss_pred             c--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 R--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ....+.........   ...+.+.+...+..+...|++
T Consensus       593 f~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~~l~  630 (656)
T 2j0j_A          593 FQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMTKCWA  630 (656)
T ss_dssp             TTTCCHHHHHHHHHHTC---CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHcCC---CCCCCccccHHHHHHHHHHcC
Confidence            2  22222222221111   111344555667777777764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.83  E-value=2.7e-21  Score=159.17  Aligned_cols=78  Identities=19%  Similarity=0.175  Sum_probs=54.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC------------Ccccccccccccccccc---ccCCcCcccchHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS------------NRTELAGTYGYIALELT---YTLKVAKKCGMHSS  155 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~------------~~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~S~  155 (208)
                      +||||||+||+++.++.+||+|||+++.......            ......+++.|+|||.+   ....++.++|||||
T Consensus       160 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~sl  239 (337)
T 3ll6_A          160 IHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWAL  239 (337)
T ss_dssp             BCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHH
T ss_pred             EEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHH
Confidence            9999999999999999999999999987654311            11134588999999988   46677899999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      |++++||++|+.|
T Consensus       240 G~il~el~~g~~p  252 (337)
T 3ll6_A          240 GCILYLLCFRQHP  252 (337)
T ss_dssp             HHHHHHHHHSSCC
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999999999

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.83  E-value=3.1e-21  Score=157.83  Aligned_cols=122  Identities=21%  Similarity=0.226  Sum_probs=75.6

Q ss_pred             HHHhhhh---hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHH
Q 039937           84 EKLLRQE---ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSS  155 (208)
Q Consensus        84 ~~~Lh~~---iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~  155 (208)
                      ..+||..   +||||||+||+++.++.+||+|||++....... ......+++.|+|||.+.     ...++.++|||||
T Consensus       137 l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl  215 (318)
T 2dyl_A          137 LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSL  215 (318)
T ss_dssp             HHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC---------------CCTTCCHHHHC--------CCTHHHHHHH
T ss_pred             HHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-cccccCCCccccChhhcccccccccCCccccchhhH
Confidence            4566652   999999999999999999999999987654432 123346889999999984     4567889999999


Q ss_pred             HHHHHHHHcCCCCcc---cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          156 GLLALEVMKGKHPRH---FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       156 Gvvl~elltg~~p~~---~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |++++||++|+.|..   .-.+.......... ........+...+..+...|++
T Consensus       216 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~  269 (318)
T 2dyl_A          216 GISLVELATGQFPYKNCKTDFEVLTKVLQEEP-PLLPGHMGFSGDFQSFVKDCLT  269 (318)
T ss_dssp             HHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC-CCCCSSSCCCHHHHHHHHHHTC
T ss_pred             HHHHHHHHhCCCCCCCCCccHHHHHHHhccCC-CCCCccCCCCHHHHHHHHHHcc
Confidence            999999999999922   22222222222221 1111122344566666666764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.83  E-value=1.2e-21  Score=170.05  Aligned_cols=82  Identities=24%  Similarity=0.421  Sum_probs=68.4

Q ss_pred             HHhhhh--hhcCcCCCceee---CCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLL---DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nill---d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .|||..  +||||||+||++   +.++.+||+|||+++...... ......||+.|+|||.+.. .++.++||||+|+++
T Consensus       140 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il  217 (484)
T 3nyv_A          140 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL  217 (484)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHH
T ss_pred             HHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHH
Confidence            455554  999999999999   567899999999987665432 2334568999999998764 689999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      |+|++|+.|
T Consensus       218 ~~ll~g~~p  226 (484)
T 3nyv_A          218 YILLSGCPP  226 (484)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHHCCCC
Confidence            999999999

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.83  E-value=2.2e-21  Score=159.63  Aligned_cols=78  Identities=22%  Similarity=0.160  Sum_probs=67.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.+||+|||++........   ......++..|+|||.+....++.++||||+|++++|+++|+.
T Consensus       156 vH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~  235 (318)
T 3lxp_A          156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD  235 (318)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999988765421   1233457788999999988888999999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       236 p  236 (318)
T 3lxp_A          236 S  236 (318)
T ss_dssp             G
T ss_pred             c
Confidence            8

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.83  E-value=3.2e-21  Score=158.43  Aligned_cols=77  Identities=21%  Similarity=0.241  Sum_probs=67.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+||+|||+++...... ......++..|+|||.+....++.++||||+|++++||++|+.|
T Consensus       142 ~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  218 (326)
T 1blx_A          142 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL  218 (326)
T ss_dssp             CCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             eeccCCHHHeEEcCCCCEEEecCcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999987654321 22345678999999999888899999999999999999999999

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=2.2e-21  Score=164.82  Aligned_cols=83  Identities=18%  Similarity=0.204  Sum_probs=63.1

Q ss_pred             Hhhhh--hhcCcCCCceee----CCCCcEEEcccceeeeecCCC---CCcccccccccccccccccc-CCcCcccchHHH
Q 039937           86 LLRQE--ISFTTSSKNGLL----DLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYT-LKVAKKCGMHSS  155 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nill----d~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~  155 (208)
                      |||..  +||||||+|||+    +.++.+||+|||+++......   .......||+.|+|||.+.. ..++.++||||+
T Consensus       143 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl  222 (405)
T 3rgf_A          143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI  222 (405)
T ss_dssp             HHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHH
T ss_pred             HHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHH
Confidence            44444  999999999999    778999999999998765431   22334678999999998876 458999999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      ||+++||++|+.|
T Consensus       223 G~il~ell~g~~p  235 (405)
T 3rgf_A          223 GCIFAELLTSEPI  235 (405)
T ss_dssp             HHHHHHHHHSSCT
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999999998

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.83  E-value=3.9e-21  Score=154.85  Aligned_cols=111  Identities=18%  Similarity=0.149  Sum_probs=73.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCCc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHPR  169 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~  169 (208)
                      +||||||+||+++.++.+||+|||++.......   ....++..|+|||.+....++.++||||+|++++|++| |+.|.
T Consensus       139 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~  215 (278)
T 1byg_A          139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  215 (278)
T ss_dssp             CCSCCSGGGEEECTTSCEEECCCCC---------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred             cccCCCcceEEEeCCCcEEEeeccccccccccc---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999999987654321   22356788999999988888999999999999999998 98882


Q ss_pred             c--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          170 H--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       170 ~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      .  ...+...... ..  ............+..+...|++
T Consensus       216 ~~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~li~~~l~  252 (278)
T 1byg_A          216 PRIPLKDVVPRVE-KG--YKMDAPDGCPPAVYEVMKNCWH  252 (278)
T ss_dssp             TTSCGGGHHHHHT-TT--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHh-cC--CCCCCcccCCHHHHHHHHHHhc
Confidence            1  1112222211 11  1122234445566666666664

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.83  E-value=4.6e-21  Score=158.50  Aligned_cols=75  Identities=21%  Similarity=0.197  Sum_probs=63.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC----CccccccccccccccccccC------CcCcccchHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS----NRTELAGTYGYIALELTYTL------KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~  160 (208)
                      +||||||+||+++.++.+||+|||+++.......    ......|++.|+|||.+...      .++.++||||||++++
T Consensus       169 vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~  248 (342)
T 1b6c_B          169 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  248 (342)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             eeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHH
Confidence            9999999999999999999999999987765422    22345789999999988754      3347899999999999


Q ss_pred             HHHcC
Q 039937          161 EVMKG  165 (208)
Q Consensus       161 elltg  165 (208)
                      ||+||
T Consensus       249 el~tg  253 (342)
T 1b6c_B          249 EIARR  253 (342)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            99999

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.83  E-value=2.5e-21  Score=160.38  Aligned_cols=80  Identities=25%  Similarity=0.302  Sum_probs=68.8

Q ss_pred             Hhhhh--hhcCcCCCceee-------------------CCCCcEEEcccceeeeecCCCCCccccccccccccccccccC
Q 039937           86 LLRQE--ISFTTSSKNGLL-------------------DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL  144 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nill-------------------d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  144 (208)
                      +||..  +||||||+||++                   +.++.+||+|||+++.....   .....||+.|+|||.+...
T Consensus       138 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~  214 (355)
T 2eu9_A          138 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILEL  214 (355)
T ss_dssp             HHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTC
T ss_pred             HHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecC
Confidence            44443  999999999999                   56789999999999875433   2345689999999999888


Q ss_pred             CcCcccchHHHHHHHHHHHcCCCC
Q 039937          145 KVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       145 ~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      .++.++||||+|++++||++|+.|
T Consensus       215 ~~~~~~Di~slG~il~el~~g~~p  238 (355)
T 2eu9_A          215 GWAQPCDVWSIGCILFEYYRGFTL  238 (355)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCccchHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.83  E-value=2.5e-21  Score=162.88  Aligned_cols=81  Identities=22%  Similarity=0.226  Sum_probs=69.2

Q ss_pred             HHhhhh---hhcCcCCCceeeCCCC-------------------------------------------------cEEEcc
Q 039937           85 KLLRQE---ISFTTSSKNGLLDLEY-------------------------------------------------EARAFD  112 (208)
Q Consensus        85 ~~Lh~~---iH~dlk~~nilld~~~-------------------------------------------------~~kl~d  112 (208)
                      .|||.+   +||||||+|||++.++                                                 .+||+|
T Consensus       160 ~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  239 (397)
T 1wak_A          160 DYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIAD  239 (397)
T ss_dssp             HHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECC
T ss_pred             HHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecc
Confidence            345542   9999999999999775                                                 799999


Q ss_pred             cceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC
Q 039937          113 FGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       113 fgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ||++......   .....||..|+|||.+....++.++||||+||+++||++|+.|
T Consensus       240 fG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  292 (397)
T 1wak_A          240 LGNACWVHKH---FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYL  292 (397)
T ss_dssp             GGGCEETTBC---SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccccccc---CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCC
Confidence            9999876543   2234689999999999988899999999999999999999998

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.83  E-value=5.2e-21  Score=153.87  Aligned_cols=109  Identities=8%  Similarity=-0.060  Sum_probs=76.6

Q ss_pred             hhcCcCCCceeeCC-------------------CCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCccc
Q 039937           91 ISFTTSSKNGLLDL-------------------EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKC  150 (208)
Q Consensus        91 iH~dlk~~nilld~-------------------~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~  150 (208)
                      +||||||+||+++.                   ...+|++|||.+.......    ...++..|+|||.+... ..+.++
T Consensus       137 vH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~  212 (289)
T 1x8b_A          137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKA  212 (289)
T ss_dssp             ECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHH
T ss_pred             eecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchh
Confidence            99999999999984                   4578999999988765432    23588999999998755 556899


Q ss_pred             chHHHHHHHHHHHcCCCCcccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          151 GMHSSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       151 Dv~S~Gvvl~elltg~~p~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||||+|++++|+++|+.|...-..+...  ...  ....+.+.+...+..+...|++
T Consensus       213 Di~slG~il~~l~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~li~~~l~  265 (289)
T 1x8b_A          213 DIFALALTVVCAAGAEPLPRNGDQWHEI--RQG--RLPRIPQVLSQEFTELLKVMIH  265 (289)
T ss_dssp             HHHHHHHHHHHHTTCCCCCSSSHHHHHH--HTT--CCCCCSSCCCHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHhcCCCCCcchhHHHHH--HcC--CCCCCCcccCHHHHHHHHHHhC
Confidence            9999999999999999873222222111  111  1122334555667777777764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.83  E-value=8.5e-21  Score=153.78  Aligned_cols=117  Identities=21%  Similarity=0.096  Sum_probs=75.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--------------CCCcccccccccccccccccc-CCcCcccchHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--------------SSNRTELAGTYGYIALELTYT-LKVAKKCGMHSS  155 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~  155 (208)
                      +||||||+||+++.++.+||+|||++......              ........++..|+|||.+.. ..++.++||||+
T Consensus       138 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl  217 (303)
T 1zy4_A          138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL  217 (303)
T ss_dssp             CCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHH
T ss_pred             ecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHH
Confidence            99999999999999999999999998765422              111234568899999999874 468899999999


Q ss_pred             HHHHHHHHcCCCCcccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          156 GLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       156 Gvvl~elltg~~p~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |++++||+++..+.....+................+......+..+...|++
T Consensus       218 G~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  269 (303)
T 1zy4_A          218 GIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLID  269 (303)
T ss_dssp             HHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTC
T ss_pred             HHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHh
Confidence            9999999995544222222322222211113333444444456666666654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.83  E-value=3.9e-21  Score=162.23  Aligned_cols=83  Identities=11%  Similarity=0.090  Sum_probs=68.1

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-------CCCcccccccccccccccccc--CCcCcccchHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-------SSNRTELAGTYGYIALELTYT--LKVAKKCGMHS  154 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-------~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~S  154 (208)
                      |||..  +||||||+|||++.++.+||+|||.+......       ........||..|+|||.+..  ..++.++||||
T Consensus       143 ~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws  222 (389)
T 3gni_B          143 YIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS  222 (389)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHH
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHH
Confidence            44444  99999999999999999999999987654322       111223468899999999876  57899999999


Q ss_pred             HHHHHHHHHcCCCC
Q 039937          155 SGLLALEVMKGKHP  168 (208)
Q Consensus       155 ~Gvvl~elltg~~p  168 (208)
                      +||+++||++|+.|
T Consensus       223 lG~il~el~~g~~p  236 (389)
T 3gni_B          223 VGITACELANGHVP  236 (389)
T ss_dssp             HHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHCCCC
Confidence            99999999999999

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.83  E-value=5.5e-22  Score=160.38  Aligned_cols=74  Identities=20%  Similarity=0.106  Sum_probs=62.3

Q ss_pred             hhcCcCCCceeeCCCCc--------EEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYE--------ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        91 iH~dlk~~nilld~~~~--------~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +||||||+||+++.++.        +|++|||++.....    .....++..|+|||.+.. ..++.++||||+|++++|
T Consensus       135 vH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  210 (289)
T 4fvq_A          135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWE  210 (289)
T ss_dssp             CCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred             ECCCcCcceEEEecCCcccccccceeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHH
Confidence            99999999999998877        99999998754332    223457889999999876 678999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|..|
T Consensus       211 l~~g~~~  217 (289)
T 4fvq_A          211 ICSGGDK  217 (289)
T ss_dssp             HHTTTCC
T ss_pred             HHcCCCC
Confidence            9996555

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.83  E-value=6.8e-21  Score=166.21  Aligned_cols=76  Identities=29%  Similarity=0.443  Sum_probs=65.7

Q ss_pred             hhcCcCCCceeeCCCC---cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEY---EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~---~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++   .+||+|||+++...... ......||+.|+|||.+. ..++.++||||+|+++++|++|+.
T Consensus       168 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~  245 (504)
T 3q5i_A          168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYP  245 (504)
T ss_dssp             ECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             EeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC-ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCC
Confidence            9999999999998775   69999999998775442 223457899999999876 568999999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       246 p  246 (504)
T 3q5i_A          246 P  246 (504)
T ss_dssp             S
T ss_pred             C
Confidence            9

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.82  E-value=4.7e-21  Score=157.65  Aligned_cols=75  Identities=23%  Similarity=0.270  Sum_probs=66.4

Q ss_pred             hhcCcCCCceeeCC-------------------CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccc
Q 039937           91 ISFTTSSKNGLLDL-------------------EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCG  151 (208)
Q Consensus        91 iH~dlk~~nilld~-------------------~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~D  151 (208)
                      +||||||+||+++.                   ++.+||+|||+++......   ....||+.|+|||.+....++.++|
T Consensus       140 vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~D  216 (339)
T 1z57_A          140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH---STLVSTRHYRAPEVILALGWSQPCD  216 (339)
T ss_dssp             ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC---CSSCSCGGGCCHHHHTTSCCCTHHH
T ss_pred             cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccc---ccccCCccccChHHhhCCCCCcchh
Confidence            99999999999987                   6689999999998754332   3456899999999998888999999


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      |||+|++++|+++|+.|
T Consensus       217 i~slG~il~el~~g~~p  233 (339)
T 1z57_A          217 VWSIGCILIEYYLGFTV  233 (339)
T ss_dssp             HHHHHHHHHHHHHSSCS
T ss_pred             hHHHHHHHHHHHhCCCC
Confidence            99999999999999998

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.82  E-value=3.2e-21  Score=160.08  Aligned_cols=81  Identities=25%  Similarity=0.237  Sum_probs=52.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCC---CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDL---EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~---~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +||..  +||||||+||+++.   ++.+||+|||+++.....  ......+++.|+|||.+....++.++||||+|++++
T Consensus       143 ~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  220 (336)
T 3fhr_A          143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY  220 (336)
T ss_dssp             HHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------------------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHH
Confidence            44443  99999999999976   455999999999876533  223456789999999998888899999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      |+++|+.|
T Consensus       221 ~l~~g~~p  228 (336)
T 3fhr_A          221 ILLCGFPP  228 (336)
T ss_dssp             HHHHSSCC
T ss_pred             HHHHCCCC
Confidence            99999999

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.82  E-value=3.1e-21  Score=160.86  Aligned_cols=78  Identities=18%  Similarity=0.284  Sum_probs=68.0

Q ss_pred             hhcCcCCCceeeCCCC--cEEEcccceeeeecCCC-------CCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEY--EARAFDFGIAKFFKLDS-------SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        91 iH~dlk~~nilld~~~--~~kl~dfgl~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +||||||+||+++.++  .+||+|||+++......       .......|++.|+|||.+....++.++||||||++++|
T Consensus       181 vH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  260 (352)
T 2jii_A          181 VHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLK  260 (352)
T ss_dssp             BCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence            9999999999999998  89999999998765331       11234478999999999988889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       261 l~~g~~p  267 (352)
T 2jii_A          261 WLYGFLP  267 (352)
T ss_dssp             HHHSCCT
T ss_pred             HHhCCCC
Confidence            9999999

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.82  E-value=3.6e-21  Score=158.70  Aligned_cols=113  Identities=16%  Similarity=0.137  Sum_probs=78.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP-  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p-  168 (208)
                      +||||||+||+++.++.+||+|||+++...... ......++..|+|||.+....++.++||||+|++++||++ |+.| 
T Consensus       164 vH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf  242 (327)
T 1fvr_A          164 IHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY  242 (327)
T ss_dssp             ECSCCSGGGEEECGGGCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             cCCCCccceEEEcCCCeEEEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCC
Confidence            999999999999999999999999987433221 1122346788999999988888999999999999999998 9998 


Q ss_pred             -cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 -RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 -~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                       .....+........   ........+...+..+...|++
T Consensus       243 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~  279 (327)
T 1fvr_A          243 CGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWR  279 (327)
T ss_dssp             TTCCHHHHHHHGGGT---CCCCCCTTBCHHHHHHHHHHTC
T ss_pred             CCCcHHHHHHHhhcC---CCCCCCCCCCHHHHHHHHHHcc
Confidence             22333333322221   1111233444566666666654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.82  E-value=3.5e-21  Score=159.97  Aligned_cols=84  Identities=23%  Similarity=0.307  Sum_probs=67.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC----------Ccccccccccccccccccc-CCcCcccc
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS----------NRTELAGTYGYIALELTYT-LKVAKKCG  151 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~-~~~~~~~D  151 (208)
                      .+||..  +||||||+||+++.++.+||+|||+++.......          ......||..|+|||.+.. ..++.++|
T Consensus       126 ~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D  205 (353)
T 2b9h_A          126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMD  205 (353)
T ss_dssp             HHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHH
T ss_pred             HHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhh
Confidence            344544  9999999999999999999999999987653211          1223467999999998754 67889999


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      |||+|++++||++|+.|
T Consensus       206 i~slG~il~~l~~g~~p  222 (353)
T 2b9h_A          206 VWSCGCILAELFLRRPI  222 (353)
T ss_dssp             HHHHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999998

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.82  E-value=3.2e-21  Score=158.98  Aligned_cols=114  Identities=18%  Similarity=0.075  Sum_probs=78.4

Q ss_pred             hhcCcCCCceeeC---CCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-
Q 039937           91 ISFTTSSKNGLLD---LEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-  164 (208)
Q Consensus        91 iH~dlk~~nilld---~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-  164 (208)
                      +||||||+||+++   .+..+||+|||++.......  .......+++.|+|||.+....++.++||||+|++++||+| 
T Consensus       162 ~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  241 (327)
T 2yfx_A          162 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL  241 (327)
T ss_dssp             CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcC
Confidence            9999999999998   45569999999987554331  12233467889999999988889999999999999999998 


Q ss_pred             CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          165 GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       165 g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+.|.  ....+.........   .....+.+...+..+...|++
T Consensus       242 g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~  283 (327)
T 2yfx_A          242 GYMPYPSKSNQEVLEFVTSGG---RMDPPKNCPGPVYRIMTQCWQ  283 (327)
T ss_dssp             SCCSSTTCCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCCcCHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHhc
Confidence            88882  22222222222211   112234455566667777764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.82  E-value=1.5e-20  Score=152.64  Aligned_cols=77  Identities=25%  Similarity=0.370  Sum_probs=66.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc------cCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY------TLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||+||+++.++.+||+|||++....... ......++..|+|||.+.      ...++.++||||+|++++||++
T Consensus       146 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~  224 (298)
T 1phk_A          146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA  224 (298)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCcceEEEcCCCcEEEecccchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHH
Confidence            999999999999999999999999998765432 223456889999999874      4467889999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       225 g~~p  228 (298)
T 1phk_A          225 GSPP  228 (298)
T ss_dssp             SSCS
T ss_pred             CCCC
Confidence            9999

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.82  E-value=6.4e-21  Score=156.11  Aligned_cols=83  Identities=20%  Similarity=0.330  Sum_probs=62.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCc---EEEcccceeeeecCC-------CCCcccccccccccccccccc-----CCcCc
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYE---ARAFDFGIAKFFKLD-------SSNRTELAGTYGYIALELTYT-----LKVAK  148 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~---~kl~dfgl~~~~~~~-------~~~~~~~~g~~~y~aPE~~~~-----~~~~~  148 (208)
                      +||..  +||||||+||+++.++.   +||+|||++......       ........||+.|+|||.+..     ..++.
T Consensus       126 ~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  205 (316)
T 2ac3_A          126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK  205 (316)
T ss_dssp             HHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTT
T ss_pred             HHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCc
Confidence            44444  99999999999988765   999999998765422       111223458999999998864     45789


Q ss_pred             ccchHHHHHHHHHHHcCCCC
Q 039937          149 KCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       149 ~~Dv~S~Gvvl~elltg~~p  168 (208)
                      ++||||+|++++||++|+.|
T Consensus       206 ~~DiwslG~il~~l~~g~~p  225 (316)
T 2ac3_A          206 RCDLWSLGVILYILLSGYPP  225 (316)
T ss_dssp             THHHHHHHHHHHHHHHSSCS
T ss_pred             ccccHhHHHHHHHHHHCCCC
Confidence            99999999999999999999

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.82  E-value=6.2e-21  Score=157.31  Aligned_cols=79  Identities=19%  Similarity=0.173  Sum_probs=67.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.++.+||+|||++........   ......++..|+|||.+....++.++||||+|++++||+||+.
T Consensus       167 vH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~  246 (326)
T 2w1i_A          167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE  246 (326)
T ss_dssp             ECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred             eccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999987754421   1223356778999999988888999999999999999999998


Q ss_pred             Cc
Q 039937          168 PR  169 (208)
Q Consensus       168 p~  169 (208)
                      |.
T Consensus       247 ~~  248 (326)
T 2w1i_A          247 KS  248 (326)
T ss_dssp             GG
T ss_pred             CC
Confidence            83

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.82  E-value=9e-21  Score=153.94  Aligned_cols=78  Identities=26%  Similarity=0.335  Sum_probs=62.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-----CCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-----SNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||+||+++.++.+||+|||++.......     .......+++.|+|||.+.. ..++.++||||+|++++|+++
T Consensus       143 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  222 (303)
T 2vwi_A          143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT  222 (303)
T ss_dssp             CCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHh
Confidence            999999999999999999999999987654321     11234568999999998864 467899999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       223 g~~p  226 (303)
T 2vwi_A          223 GAAP  226 (303)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            9999

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.81  E-value=7.4e-21  Score=158.47  Aligned_cols=81  Identities=21%  Similarity=0.296  Sum_probs=65.8

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      ++||..  +||||||+||+++.++.+||+|||+++.....   .....+++.|+|||.+.. ..++.++||||+|++++|
T Consensus       140 ~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~e  216 (353)
T 3coi_A          140 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE  216 (353)
T ss_dssp             HHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHH
T ss_pred             HHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHH
Confidence            345544  99999999999999999999999998765432   233467899999998876 678899999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       217 l~~g~~p  223 (353)
T 3coi_A          217 MLTGKTL  223 (353)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999999

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.81  E-value=1.5e-20  Score=150.91  Aligned_cols=77  Identities=21%  Similarity=0.300  Sum_probs=58.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++.++.+|++|||++....... ......+++.|+|||.+..... +.++||||+|++++|+++|+.|
T Consensus       133 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  210 (276)
T 2h6d_A          133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP  210 (276)
T ss_dssp             SCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCCChhhEEECCCCCEEEeecccccccCCCc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987654432 1223467899999999876654 6899999999999999999999

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.81  E-value=1.9e-20  Score=153.11  Aligned_cols=79  Identities=23%  Similarity=0.262  Sum_probs=66.8

Q ss_pred             hhcCcCCCceeeC-CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHHHHHcCCCC
Q 039937           91 ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus        91 iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||||+||+++ .++.+||+|||+++......  .....++..|+|||.+..... +.++||||+|++++|+++|+.|
T Consensus       161 ~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  238 (312)
T 2iwi_A          161 VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP  238 (312)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             eecCCChhhEEEeCCCCeEEEEEcchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCC
Confidence            9999999999999 88999999999998765432  234568999999998876655 4589999999999999999999


Q ss_pred             ccc
Q 039937          169 RHF  171 (208)
Q Consensus       169 ~~~  171 (208)
                      ...
T Consensus       239 f~~  241 (312)
T 2iwi_A          239 FER  241 (312)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            443

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.81  E-value=2.6e-21  Score=164.05  Aligned_cols=82  Identities=22%  Similarity=0.242  Sum_probs=68.0

Q ss_pred             Hhhhh--hhcCcCCCceee----CCCCcEEEcccceeeeecCCCCCcccccccccccccccccc--------CCcCcccc
Q 039937           86 LLRQE--ISFTTSSKNGLL----DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT--------LKVAKKCG  151 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nill----d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~D  151 (208)
                      |||..  +||||||+||++    +.++.+||+|||+++....... .....||..|+|||.+..        ..++.++|
T Consensus       127 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~D  205 (396)
T 4eut_A          127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVD  205 (396)
T ss_dssp             HHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG-SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHH
T ss_pred             HHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc-cccccCCccccCHHHhhccccccccccCCCcHHH
Confidence            44444  999999999999    8888999999999987654321 223568999999998764        56778999


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      |||||+++|||++|+.|
T Consensus       206 iwSlG~il~el~tg~~P  222 (396)
T 4eut_A          206 LWSIGVTFYHAATGSLP  222 (396)
T ss_dssp             HHHHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHHCCCC
Confidence            99999999999999999

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.81  E-value=8.3e-21  Score=156.18  Aligned_cols=83  Identities=27%  Similarity=0.326  Sum_probs=67.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCc---EEEcccceeeeecCCCCCccccccccccccccccc---cCCcCcccchHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYE---ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY---TLKVAKKCGMHSSG  156 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~---~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~S~G  156 (208)
                      .+||..  +||||||+||+++.++.   +||+|||+++...... ......|++.|+|||.+.   ...++.++||||+|
T Consensus       128 ~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  206 (322)
T 2ycf_A          128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG  206 (322)
T ss_dssp             HHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHH
T ss_pred             HHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHH
Confidence            344444  99999999999987654   9999999998765331 122346899999999864   46678999999999


Q ss_pred             HHHHHHHcCCCC
Q 039937          157 LLALEVMKGKHP  168 (208)
Q Consensus       157 vvl~elltg~~p  168 (208)
                      ++++|+++|+.|
T Consensus       207 ~il~~l~~g~~p  218 (322)
T 2ycf_A          207 VILFICLSGYPP  218 (322)
T ss_dssp             HHHHHHHHSSCS
T ss_pred             HHHHHHHhCCCC
Confidence            999999999999

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.81  E-value=1e-20  Score=162.33  Aligned_cols=83  Identities=27%  Similarity=0.339  Sum_probs=63.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCC-------------CcEEEcccceeeeecCCCC----Ccccccccccccccccccc---
Q 039937           86 LLRQE--ISFTTSSKNGLLDLE-------------YEARAFDFGIAKFFKLDSS----NRTELAGTYGYIALELTYT---  143 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~-------------~~~kl~dfgl~~~~~~~~~----~~~~~~g~~~y~aPE~~~~---  143 (208)
                      |||..  +||||||+||+++.+             +.+||+|||+++.......    ......||+.|+|||.+..   
T Consensus       130 ~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  209 (434)
T 2rio_A          130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNN  209 (434)
T ss_dssp             HHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCT
T ss_pred             HHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccc
Confidence            44444  999999999999654             5899999999988765421    1234578999999998864   


Q ss_pred             ----CCcCcccchHHHHHHHHHHHc-CCCC
Q 039937          144 ----LKVAKKCGMHSSGLLALEVMK-GKHP  168 (208)
Q Consensus       144 ----~~~~~~~Dv~S~Gvvl~ellt-g~~p  168 (208)
                          ..++.++||||+||+++||+| |+.|
T Consensus       210 ~~~~~~~~~~~DiwSlG~il~ellt~g~~P  239 (434)
T 2rio_A          210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHP  239 (434)
T ss_dssp             TSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence                568899999999999999999 8888

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.81  E-value=1.6e-20  Score=153.81  Aligned_cols=79  Identities=20%  Similarity=0.152  Sum_probs=64.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCC---------ccccccccccccccccccC---CcCcccchHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSN---------RTELAGTYGYIALELTYTL---KVAKKCGMHSSGLL  158 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~S~Gvv  158 (208)
                      +||||||+||+++.++.+||+|||++.........         .....|++.|+|||.+...   .++.++||||+|++
T Consensus       156 vH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  235 (317)
T 2buj_A          156 AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV  235 (317)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHH
T ss_pred             ccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHH
Confidence            99999999999999999999999988765321100         1123468999999988644   36889999999999


Q ss_pred             HHHHHcCCCCc
Q 039937          159 ALEVMKGKHPR  169 (208)
Q Consensus       159 l~elltg~~p~  169 (208)
                      ++||++|+.|.
T Consensus       236 l~el~~g~~p~  246 (317)
T 2buj_A          236 LYAMMFGEGPY  246 (317)
T ss_dssp             HHHHHHSSCTT
T ss_pred             HHHHHhCCCCh
Confidence            99999999993

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.81  E-value=1.4e-20  Score=157.28  Aligned_cols=75  Identities=19%  Similarity=0.195  Sum_probs=65.6

Q ss_pred             hhcCcCCCceee------CCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLL------DLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nill------d~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||+||++      +..+.+||+|||+++.....   .....+|+.|+|||.+....++.++||||+|++++||++
T Consensus       154 vH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  230 (373)
T 1q8y_A          154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT  230 (373)
T ss_dssp             ECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             EecCCChHHeEEeccCCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHh
Confidence            999999999999      44558999999999876543   223468999999999988889999999999999999999


Q ss_pred             CCCC
Q 039937          165 GKHP  168 (208)
Q Consensus       165 g~~p  168 (208)
                      |+.|
T Consensus       231 g~~p  234 (373)
T 1q8y_A          231 GDFL  234 (373)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            9999

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.80  E-value=2.9e-20  Score=159.60  Aligned_cols=84  Identities=26%  Similarity=0.352  Sum_probs=62.7

Q ss_pred             HHhhhh--hhcCcCCCceeeC-----CCCcEEEcccceeeeecCCC---CCccccccccccccccccc---cCCcCcccc
Q 039937           85 KLLRQE--ISFTTSSKNGLLD-----LEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTY---TLKVAKKCG  151 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld-----~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~~D  151 (208)
                      +|||..  +||||||+||+++     ....+||+|||+++......   .......||+.|+|||.+.   ....+.++|
T Consensus       132 ~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~D  211 (432)
T 3p23_A          132 AHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVD  211 (432)
T ss_dssp             HHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHH
T ss_pred             HHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHH
Confidence            445544  9999999999994     33468899999998765431   2234467899999999987   456678999


Q ss_pred             hHHHHHHHHHHHc-CCCC
Q 039937          152 MHSSGLLALEVMK-GKHP  168 (208)
Q Consensus       152 v~S~Gvvl~ellt-g~~p  168 (208)
                      |||+||+++|+++ |+.|
T Consensus       212 iwSlG~il~ellt~g~~p  229 (432)
T 3p23_A          212 IFSAGCVFYYVISEGSHP  229 (432)
T ss_dssp             HHHHHHHHHHHHTTSCBT
T ss_pred             HHHHHHHHHHHHcCCCCC
Confidence            9999999999999 8888

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.80  E-value=1.9e-20  Score=153.02  Aligned_cols=78  Identities=19%  Similarity=0.219  Sum_probs=63.7

Q ss_pred             hhcCcCCCceeeC-CCCcEEEcccceeeeecCC---CCCcccccccccccccccccc-CCcCcccchHHHHHHHHHHHcC
Q 039937           91 ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALEVMKG  165 (208)
Q Consensus        91 iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg  165 (208)
                      +||||||+||+++ .++.+||+|||+++.....   ........++..|+|||.+.. ..++.++||||+|++++|+++|
T Consensus       142 ~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g  221 (320)
T 2i6l_A          142 LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG  221 (320)
T ss_dssp             BCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhC
Confidence            9999999999997 5679999999999876432   112234457889999998764 6788999999999999999999


Q ss_pred             CCC
Q 039937          166 KHP  168 (208)
Q Consensus       166 ~~p  168 (208)
                      +.|
T Consensus       222 ~~p  224 (320)
T 2i6l_A          222 KTL  224 (320)
T ss_dssp             SCS
T ss_pred             CCC
Confidence            999

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=6e-20  Score=148.61  Aligned_cols=81  Identities=23%  Similarity=0.453  Sum_probs=65.3

Q ss_pred             Hhhhh--hhcCcCCCceeeCCC---CcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLE---YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~---~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +||..  +||||||+||+++.+   +.+||+|||++....... ......++..|+|||.+.. .++.++||||+|++++
T Consensus       136 ~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~  213 (287)
T 2wei_A          136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY  213 (287)
T ss_dssp             HHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHH
T ss_pred             HHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHH
Confidence            44444  999999999999754   479999999987654432 1223457899999998764 5789999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ++++|+.|
T Consensus       214 ~l~~g~~p  221 (287)
T 2wei_A          214 ILLSGTPP  221 (287)
T ss_dssp             HHHHSSCS
T ss_pred             HHHhCCCC
Confidence            99999999

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.79  E-value=1.8e-19  Score=149.35  Aligned_cols=82  Identities=17%  Similarity=0.223  Sum_probs=69.9

Q ss_pred             HHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCc-ccchHHHHHHH
Q 039937           85 KLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAK-KCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~S~Gvvl  159 (208)
                      .+||. .  +||||||+||+++.++.+||+|||.+......  ......++..|+|||.+... .++. ++||||+|+++
T Consensus       165 ~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  242 (348)
T 2pml_X          165 SYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL  242 (348)
T ss_dssp             HHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHH
T ss_pred             HHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHH
Confidence            56676 4  99999999999999999999999999876543  22345688999999998866 5655 99999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +|+++|+.|
T Consensus       243 ~~l~~g~~p  251 (348)
T 2pml_X          243 YVMFYNVVP  251 (348)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.78  E-value=3.4e-19  Score=159.80  Aligned_cols=82  Identities=29%  Similarity=0.333  Sum_probs=69.2

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCc---EEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYE---ARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~---~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      |||..  +||||||+||+++.++.   +||+|||++....... ......|+..|+|||.+....++.++||||+|++++
T Consensus       136 yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLy  214 (676)
T 3qa8_A          136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF  214 (676)
T ss_dssp             HHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHH
T ss_pred             HHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHH
Confidence            44443  99999999999986654   8999999998765442 223457899999999998889999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      |+++|+.|
T Consensus       215 eLltG~~P  222 (676)
T 3qa8_A          215 ECITGFRP  222 (676)
T ss_dssp             HHHSSCSS
T ss_pred             HHHHCCCC
Confidence            99999999

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.77  E-value=1.3e-19  Score=163.48  Aligned_cols=79  Identities=18%  Similarity=0.104  Sum_probs=66.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|+|..  +||||||+||+++.+ .+||+|||+++.....    ....||++|+|||.+.... +.++||||||++++|
T Consensus       195 L~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~  268 (681)
T 2pzi_A          195 LSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAA  268 (681)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHH
Confidence            3455555  999999999999986 8999999999876543    3456899999999887554 889999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|..|
T Consensus       269 l~~g~~~  275 (681)
T 2pzi_A          269 LTLDLPT  275 (681)
T ss_dssp             HHSCCCE
T ss_pred             HHhCCCC
Confidence            9999877

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.76  E-value=1.1e-19  Score=152.46  Aligned_cols=82  Identities=11%  Similarity=-0.049  Sum_probs=70.1

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc--CCcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT--LKVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl  159 (208)
                      ..|||..  +||||||+|||++.++.+||+|||+++......   ....+++.|+|||.+..  ..++.++||||||+++
T Consensus       207 L~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il  283 (371)
T 3q60_A          207 AANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG---PASSVPVTYAPREFLNASTATFTHALNAWQLGLSI  283 (371)
T ss_dssp             HHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE---EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHH
T ss_pred             HHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCc---cCccCCcCCcChhhccCCCCCcCccccHHHHHHHH
Confidence            4566655  999999999999999999999999998764321   13456799999999976  6789999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       284 ~elltg~~P  292 (371)
T 3q60_A          284 YRVWCLFLP  292 (371)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999999

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.69  E-value=2.4e-18  Score=142.32  Aligned_cols=73  Identities=10%  Similarity=-0.092  Sum_probs=62.4

Q ss_pred             hhcCcCCCceeeCCCC--------------------cEEEcccceeeeecCCCCCccccccccccccccccccCCcCccc
Q 039937           91 ISFTTSSKNGLLDLEY--------------------EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKC  150 (208)
Q Consensus        91 iH~dlk~~nilld~~~--------------------~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~  150 (208)
                      +||||||+|||++.++                    .+||+|||+++.....     ...||+.|+|||.+.+.. +.++
T Consensus       184 vHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE~~~g~~-~~~~  257 (336)
T 2vuw_A          184 EHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDEDLFTGDG-DYQF  257 (336)
T ss_dssp             BCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSGGGCCCS-SHHH
T ss_pred             eECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChhhhcCCC-ccce
Confidence            9999999999999887                    8999999999877642     347899999999987655 8899


Q ss_pred             chHHHHHH-HHHHHcCCCCc
Q 039937          151 GMHSSGLL-ALEVMKGKHPR  169 (208)
Q Consensus       151 Dv~S~Gvv-l~elltg~~p~  169 (208)
                      ||||++++ .+++++|..|.
T Consensus       258 Diwsl~~~~~~~~~~g~~p~  277 (336)
T 2vuw_A          258 DIYRLMKKENNNRWGEYHPY  277 (336)
T ss_dssp             HHHHHHHHHHTTCTTSCCTH
T ss_pred             ehhhhhCCCCcccccccCCC
Confidence            99998777 66778899983

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.66  E-value=7.3e-17  Score=131.30  Aligned_cols=57  Identities=26%  Similarity=0.249  Sum_probs=49.6

Q ss_pred             hhcCcCCCceeeCC---CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDL---EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~---~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+||+++.   ++.+||+|||++.....                      ..++.++||||+|++++||++|+.
T Consensus       139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~----------------------~~~~~~~DiwslG~il~el~tg~~  196 (299)
T 3m2w_A          139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG----------------------EKYDKSCDMWSLGVIMYILLCGYP  196 (299)
T ss_dssp             ECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT----------------------CGGGGHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCCCCHHHEEEecCCCCCcEEEecccccccccc----------------------ccCCchhhHHHHHHHHHHHHHCCC
Confidence            99999999999998   78999999998865431                      335678999999999999999999


Q ss_pred             Cc
Q 039937          168 PR  169 (208)
Q Consensus       168 p~  169 (208)
                      |.
T Consensus       197 pf  198 (299)
T 3m2w_A          197 PF  198 (299)
T ss_dssp             SC
T ss_pred             CC
Confidence            93

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.65  E-value=1.2e-17  Score=135.77  Aligned_cols=57  Identities=4%  Similarity=-0.026  Sum_probs=47.3

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||..  +||||||+||+++.++.+|++++                    +|++|       ++.++||||+|+++|||
T Consensus       143 ~~lH~~givH~Dikp~NIll~~~g~~kl~~~--------------------~~~~~-------~~~~~Di~slG~il~el  195 (286)
T 3uqc_A          143 DAAHRAGVALSIDHPSRVRVSIDGDVVLAYP--------------------ATMPD-------ANPQDDIRGIGASLYAL  195 (286)
T ss_dssp             HHHHHTTCCCCCCSGGGEEEETTSCEEECSC--------------------CCCTT-------CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCccCCCCcccEEEcCCCCEEEEec--------------------cccCC-------CCchhHHHHHHHHHHHH
Confidence            345544  99999999999999999998743                    23333       57899999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      +||+.|
T Consensus       196 ltg~~P  201 (286)
T 3uqc_A          196 LVNRWP  201 (286)
T ss_dssp             HHSEEC
T ss_pred             HHCCCC
Confidence            999999

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.52  E-value=5e-16  Score=137.56  Aligned_cols=82  Identities=18%  Similarity=0.075  Sum_probs=51.4

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      -.+|+|.+  |||||||+|||++.++.+||+|||+++.............||++|||||.+.+ ....++|+||.|++.+
T Consensus       351 AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~  429 (569)
T 4azs_A          351 SLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPF  429 (569)
T ss_dssp             HHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------C
T ss_pred             HHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchh
Confidence            34566666  99999999999999999999999999877655444556789999999998764 5677899999999877


Q ss_pred             HHHcC
Q 039937          161 EVMKG  165 (208)
Q Consensus       161 elltg  165 (208)
                      ++.++
T Consensus       430 ~l~~~  434 (569)
T 4azs_A          430 NLPQP  434 (569)
T ss_dssp             CCCTT
T ss_pred             hhccc
Confidence            65443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.40  E-value=2.7e-14  Score=125.74  Aligned_cols=81  Identities=16%  Similarity=0.097  Sum_probs=63.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-------Ccccccccccccccccccc--CCcCcccchHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-------NRTELAGTYGYIALELTYT--LKVAKKCGMHS  154 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~S  154 (208)
                      |||..  +||||||+|||++.  .+||+|||+++.......       ......||+.|+|||.+..  ..++...|+||
T Consensus       446 ~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws  523 (540)
T 3en9_A          446 KLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWE  523 (540)
T ss_dssp             HHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHH
T ss_pred             HHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHH
Confidence            44444  99999999999999  999999999998754311       1135679999999999875  55677889999


Q ss_pred             HHHHHHHHHcCCCC
Q 039937          155 SGLLALEVMKGKHP  168 (208)
Q Consensus       155 ~Gvvl~elltg~~p  168 (208)
                      ..+-.++-+.++.+
T Consensus       524 ~vl~~l~~v~~r~r  537 (540)
T 3en9_A          524 IILELMKDVERRAR  537 (540)
T ss_dssp             HHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHHhccc
Confidence            88888887765543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.88  E-value=9.2e-10  Score=89.06  Aligned_cols=38  Identities=18%  Similarity=-0.087  Sum_probs=32.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY  142 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~  142 (208)
                      +||||||.|||++ ++.+||+|||+++..             ..++|||++.
T Consensus       215 iHrDlkp~NILl~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~  252 (282)
T 1zar_A          215 VHGDLSQYNVLVS-EEGIWIIDFPQSVEV-------------GEEGWREILE  252 (282)
T ss_dssp             ECSCCSTTSEEEE-TTEEEECCCTTCEET-------------TSTTHHHHHH
T ss_pred             EeCCCCHHHEEEE-CCcEEEEECCCCeEC-------------CCCCHHHHHH
Confidence            9999999999999 999999999988643             3467788764

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*

Probab=98.09  E-value=1.3e-06  Score=79.59  Aligned_cols=47  Identities=38%  Similarity=0.708  Sum_probs=42.3

Q ss_pred             CCCCCEEecccCCCcccCCCCcccCcCCcccccCCCCcCCCcCCCCCcc
Q 039937            1 MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCK   49 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l~~~~~~~~~c~   49 (208)
                      +++|++||||+|+|+|+||....+..+...+|.||++|||.+.  ++|.
T Consensus       703 l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l--~~C~  749 (768)
T 3rgz_A          703 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--PRCD  749 (768)
T ss_dssp             CCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS--CCCC
T ss_pred             CCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC--cCCC
Confidence            4689999999999999999998999999999999999999874  4785

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.07  E-value=1.1e-06  Score=74.18  Aligned_cols=28  Identities=18%  Similarity=-0.051  Sum_probs=23.8

Q ss_pred             hhcCcCCCceeeCCCC----------cEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEY----------EARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~----------~~kl~dfgl~~~  118 (208)
                      +||||||.|||+++++          .+.++||+-+..
T Consensus       227 VHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          227 IHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             ECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             cCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            9999999999998776          488999986544

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.76  E-value=1.3e-05  Score=63.60  Aligned_cols=36  Identities=19%  Similarity=0.061  Sum_probs=30.7

Q ss_pred             hHHHhh-hh--hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           83 LEKLLR-QE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        83 L~~~Lh-~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      ...++| ..  +||||||.|||++.  .++|+|||++....
T Consensus       182 ~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          182 NVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             HHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred             HHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence            456788 54  99999999999998  89999999997653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=95.36  E-value=0.0025  Score=51.23  Aligned_cols=76  Identities=21%  Similarity=0.072  Sum_probs=46.7

Q ss_pred             hhcCcCCCceeeCC--CCcEEEcccceeeeecCCC---CCccc-----------ccccccccc-ccccccCCcCcccchH
Q 039937           91 ISFTTSSKNGLLDL--EYEARAFDFGIAKFFKLDS---SNRTE-----------LAGTYGYIA-LELTYTLKVAKKCGMH  153 (208)
Q Consensus        91 iH~dlk~~nilld~--~~~~kl~dfgl~~~~~~~~---~~~~~-----------~~g~~~y~a-PE~~~~~~~~~~~Dv~  153 (208)
                      +|+|+++.||++++  .....+.||+.+....+..   .....           .....+... |+...  +.....+.|
T Consensus       194 ~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~--r~~~~~~~~  271 (304)
T 3sg8_A          194 IHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLE--KYRMKEKYW  271 (304)
T ss_dssp             ECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHH--HHHHHHHHH
T ss_pred             EeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHH--HHHHHHHHH
Confidence            99999999999998  5667899999877643310   00000           000001111 22111  111225789


Q ss_pred             HHHHHHHHHHcCCCC
Q 039937          154 SSGLLALEVMKGKHP  168 (208)
Q Consensus       154 S~Gvvl~elltg~~p  168 (208)
                      +++.+++.+.+|..+
T Consensus       272 ~l~~~~~~~~~g~~~  286 (304)
T 3sg8_A          272 SFEKIIYGKEYGYMD  286 (304)
T ss_dssp             HHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHcCCHH
Confidence            999999999999876

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=94.40  E-value=0.014  Score=45.09  Aligned_cols=28  Identities=11%  Similarity=-0.071  Sum_probs=24.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|++|.||+++++....+.||+.+..
T Consensus       187 ~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          187 THGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             ECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            9999999999998877677999987654

>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7

Probab=93.93  E-value=0.043  Score=40.83  Aligned_cols=34  Identities=9%  Similarity=0.098  Sum_probs=19.4

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      ++|+.|||++|++++..|.. ..+.++....+.+|
T Consensus        78 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N  112 (192)
T 1w8a_A           78 SHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN  112 (192)
T ss_dssp             TTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSS
T ss_pred             ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence            56777777777777766652 23344444444444

>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D

Probab=93.61  E-value=0.06  Score=39.27  Aligned_cols=35  Identities=20%  Similarity=0.254  Sum_probs=23.0

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|||++|+|++..|.. ..+.++....+.+|
T Consensus        53 l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N   88 (170)
T 3g39_A           53 LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN   88 (170)
T ss_dssp             CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             cccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence            467888888888888665543 34555555555555

>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}

Probab=93.15  E-value=0.076  Score=38.91  Aligned_cols=35  Identities=14%  Similarity=0.114  Sum_probs=23.9

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.|||++|+|++..|.. ..+.++....+.+|
T Consensus        56 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N   91 (174)
T 2r9u_A           56 LVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN   91 (174)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             CcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence            467889999999998855542 34556666666565

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*

Probab=92.39  E-value=0.05  Score=49.33  Aligned_cols=41  Identities=32%  Similarity=0.553  Sum_probs=26.3

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcCCCc
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLCGDI   42 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~~~   42 (208)
                      +++|+.||||+|+|+|.||.. ..+..+....+.+| .+.|.+
T Consensus       655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N-~l~g~i  696 (768)
T 3rgz_A          655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN-KLDGRI  696 (768)
T ss_dssp             CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS-CCEECC
T ss_pred             cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC-cccCcC
Confidence            467888888888888888865 33445555555555 444444

>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}

Probab=92.32  E-value=0.095  Score=39.83  Aligned_cols=35  Identities=17%  Similarity=0.152  Sum_probs=22.1

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|+|++|++++..|.. ..+.++....+.+|
T Consensus       104 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N  139 (220)
T 2v70_A          104 LESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN  139 (220)
T ss_dssp             CSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTS
T ss_pred             CcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCC
Confidence            467888888888888877754 23344444444444

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=92.15  E-value=0.056  Score=41.94  Aligned_cols=28  Identities=11%  Similarity=-0.071  Sum_probs=23.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+++.||++++.....+.||+.+..
T Consensus       186 ~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          186 SHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             ECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ECCCCCcCcEEEECCcEEEEEEchhccc
Confidence            9999999999998766667999986643

>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*

Probab=91.50  E-value=0.17  Score=35.37  Aligned_cols=37  Identities=16%  Similarity=0.148  Sum_probs=27.1

Q ss_pred             CCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcC
Q 039937            3 WLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLC   39 (208)
Q Consensus         3 ~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~   39 (208)
                      +|+.|||++|+|+.--+.. ..+..+....+.+|+..|
T Consensus        32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C   69 (130)
T 3rfe_A           32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC   69 (130)
T ss_dssp             TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred             CCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence            7999999999998744432 234456666778898888

>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*

Probab=91.37  E-value=0.14  Score=44.43  Aligned_cols=18  Identities=17%  Similarity=0.067  Sum_probs=9.4

Q ss_pred             CCCCEEecccCCCcccCC
Q 039937            2 HWLSRIDISYNALQGPIP   19 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip   19 (208)
                      ++|++||||+|+|++..|
T Consensus       518 ~~L~~L~Ls~N~l~~l~~  535 (635)
T 4g8a_A          518 SSLQVLNMSHNNFFSLDT  535 (635)
T ss_dssp             TTCCEEECTTSCCCBCCC
T ss_pred             CCCCEEECCCCcCCCCCh
Confidence            445555555555555444

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7

Probab=91.32  E-value=0.16  Score=41.06  Aligned_cols=35  Identities=20%  Similarity=0.092  Sum_probs=21.4

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      |++|+.||||+|+|+|.+|.. ..+.++....+.+|
T Consensus        55 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N   90 (347)
T 2ifg_A           55 LGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN   90 (347)
T ss_dssp             CCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred             ccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence            467788888888888877753 33444444444444

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7

Probab=91.06  E-value=0.13  Score=41.62  Aligned_cols=38  Identities=29%  Similarity=0.331  Sum_probs=17.0

Q ss_pred             CCCCEEecccCCCcccCCCCcccCcCCcccccCCCCcC
Q 039937            2 HWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLC   39 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l~   39 (208)
                      ++|+.|||++|+|++..|.......+....+.+|+.-|
T Consensus        80 ~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c  117 (347)
T 2ifg_A           80 PRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC  117 (347)
T ss_dssp             SCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred             cCCCEEeCCCCccceeCHHHcccCCceEEEeeCCCccC
Confidence            45566666666665443332211223333444444433

>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A

Probab=90.85  E-value=0.16  Score=38.51  Aligned_cols=35  Identities=14%  Similarity=0.160  Sum_probs=23.3

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|+|++|++++..|.. ..+.++....+.+|
T Consensus       103 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N  138 (220)
T 2v9t_B          103 LFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDN  138 (220)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             CCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCC
Confidence            467888888888888887754 23444555555555

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=90.78  E-value=0.11  Score=42.52  Aligned_cols=29  Identities=7%  Similarity=0.021  Sum_probs=24.6

Q ss_pred             hhcCcCCCceeeCCCCc--EEEcccceeeee
Q 039937           91 ISFTTSSKNGLLDLEYE--ARAFDFGIAKFF  119 (208)
Q Consensus        91 iH~dlk~~nilld~~~~--~kl~dfgl~~~~  119 (208)
                      +|+|+++.||+++.+..  ..+.||+.+..-
T Consensus       219 vHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          219 VHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             ECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             EeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence            99999999999997653  689999987653

>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}

Probab=90.49  E-value=0.24  Score=35.92  Aligned_cols=35  Identities=20%  Similarity=0.123  Sum_probs=23.0

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|||++|++++..|.. ..+.++....+.+|
T Consensus        75 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N  110 (177)
T 2o6r_A           75 LTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTN  110 (177)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             CCccCEEECCCCCccccCHHHhhCCcccCEEECcCC
Confidence            467888888888888766643 33455555555555

>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}

Probab=90.12  E-value=0.21  Score=37.06  Aligned_cols=35  Identities=29%  Similarity=0.425  Sum_probs=24.2

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|||++|++++..|.. ..+.++....+.+|
T Consensus        77 l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N  112 (193)
T 2wfh_A           77 MTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGN  112 (193)
T ss_dssp             CTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS
T ss_pred             CCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCC
Confidence            467899999999998877753 33455555555555

>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D

Probab=89.91  E-value=0.26  Score=35.75  Aligned_cols=38  Identities=13%  Similarity=0.058  Sum_probs=27.5

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcCC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLCG   40 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~   40 (208)
                      ++|+.|||++|++++..|.. ..+.++....+.+| .+.+
T Consensus        30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N-~l~~   68 (170)
T 3g39_A           30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNN-QLTV   68 (170)
T ss_dssp             TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSS-CCCC
T ss_pred             CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCC-CcCc
Confidence            47899999999999998864 44556666666666 3443

>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7

Probab=89.68  E-value=0.27  Score=36.30  Aligned_cols=33  Identities=15%  Similarity=0.055  Sum_probs=18.6

Q ss_pred             CCCEEecccCCCcccCCC--CcccCcCCcccccCC
Q 039937            3 WLSRIDISYNALQGPIPD--STTFRDAPMKALQGN   35 (208)
Q Consensus         3 ~L~~l~ls~N~l~g~ip~--~~~~~~~~~~~~~~n   35 (208)
                      +|++|++++|++++..|.  ...+..+....+.+|
T Consensus        30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N   64 (192)
T 1w8a_A           30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRN   64 (192)
T ss_dssp             TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSS
T ss_pred             CCCEEECCCCcCCccCCccccccCCCCCEEECCCC
Confidence            566777777777666554  233444444444444

>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}

Probab=89.59  E-value=0.29  Score=37.26  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=21.4

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.|+|++|+++ .||.. ..+.++....+.+|
T Consensus       111 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N  145 (229)
T 3e6j_A          111 LVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQN  145 (229)
T ss_dssp             CTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSS
T ss_pred             chhhCeEeccCCccc-ccCcccccCCCCCEEECCCC
Confidence            467888888888888 66654 23444444455555

>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A

Probab=89.57  E-value=0.29  Score=37.64  Aligned_cols=35  Identities=17%  Similarity=0.219  Sum_probs=22.3

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|+|++|++++..|.. ..+.++....+.+|
T Consensus       130 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N  165 (251)
T 3m19_A          130 LTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN  165 (251)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             CCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC
Confidence            457888888888888766632 33455555555555

>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}

Probab=89.45  E-value=0.29  Score=35.70  Aligned_cols=38  Identities=13%  Similarity=0.116  Sum_probs=27.7

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcCC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLCG   40 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~   40 (208)
                      ++|+.|+|++|++++.+|.. ..+.++....+.+| .+.+
T Consensus        33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~   71 (174)
T 2r9u_A           33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSN-KLTA   71 (174)
T ss_dssp             TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCCC
T ss_pred             CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCC-CCCc
Confidence            47999999999999998864 44566666666666 3443

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=89.05  E-value=0.16  Score=40.67  Aligned_cols=28  Identities=18%  Similarity=0.181  Sum_probs=25.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+++.||+++.+..+.+.||+.+..
T Consensus       225 ~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          225 CHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             ECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             ecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            9999999999998888899999987754

>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*

Probab=88.53  E-value=0.29  Score=41.96  Aligned_cols=18  Identities=39%  Similarity=0.564  Sum_probs=9.2

Q ss_pred             CCCCEEecccCCCcccCCC
Q 039937            2 HWLSRIDISYNALQGPIPD   20 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~   20 (208)
                      ++|++|||++|+++ .||.
T Consensus       451 ~~L~~L~Ls~N~l~-~ip~  468 (549)
T 2z81_A          451 PRLQELYISRNKLK-TLPD  468 (549)
T ss_dssp             TTCCEEECCSSCCS-SCCC
T ss_pred             ChhcEEECCCCccC-cCCC
Confidence            34555555555554 4444

>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}

Probab=88.10  E-value=0.45  Score=35.35  Aligned_cols=35  Identities=17%  Similarity=0.128  Sum_probs=21.6

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|+|++|++++..|.. ..+.++....+.+|
T Consensus        99 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N  134 (208)
T 2o6s_A           99 LTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQN  134 (208)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             ccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCC
Confidence            357888888888887665542 33445555555555

>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A

Probab=88.05  E-value=0.2  Score=39.72  Aligned_cols=35  Identities=20%  Similarity=0.238  Sum_probs=24.3

Q ss_pred             CCCCCEEecccCCCcc--cCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQG--PIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g--~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.||||+|+|++  .+|.. ..+.++....+.+|
T Consensus       169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N  206 (267)
T 3rw6_A          169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN  206 (267)
T ss_dssp             CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTS
T ss_pred             CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCC
Confidence            4689999999999998  66643 23555555555555

>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A

Probab=87.73  E-value=0.45  Score=37.09  Aligned_cols=35  Identities=26%  Similarity=0.286  Sum_probs=21.5

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.|++++|++++..|.. ..+.++....+.+|
T Consensus       156 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N  191 (272)
T 3rfs_A          156 LTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN  191 (272)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             CccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence            357788888888887666543 33445555555454

>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A

Probab=87.51  E-value=0.15  Score=35.85  Aligned_cols=34  Identities=12%  Similarity=0.047  Sum_probs=20.1

Q ss_pred             CCCCCEEecccCCCcccCCCCcccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n   35 (208)
                      +++|+.|++++|++++. +....+..+....+.+|
T Consensus        41 l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n   74 (149)
T 2je0_A           41 FEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDN   74 (149)
T ss_dssp             CTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSS
T ss_pred             cCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCC
Confidence            35677777777777766 44344445554445444

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=87.51  E-value=0.24  Score=41.45  Aligned_cols=29  Identities=7%  Similarity=0.006  Sum_probs=25.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeec
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFK  120 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~  120 (208)
                      +|+|+++.||+++.+. +.+.||+.+..-.
T Consensus       235 iHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          235 IHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             ECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             EecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            9999999999998776 8999998876543

>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}

Probab=87.44  E-value=0.47  Score=35.14  Aligned_cols=36  Identities=22%  Similarity=0.209  Sum_probs=26.2

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNK   36 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~   36 (208)
                      +++|+.|||++|++++..|.. ..+..+....+.+|.
T Consensus        53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~   89 (193)
T 2wfh_A           53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR   89 (193)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred             ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence            468999999999999877753 345556655665663

>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A

Probab=86.83  E-value=0.22  Score=35.75  Aligned_cols=33  Identities=12%  Similarity=0.018  Sum_probs=17.6

Q ss_pred             CCCCEEecccCCCcccCCCCcccCcCCcccccCC
Q 039937            2 HWLSRIDISYNALQGPIPDSTTFRDAPMKALQGN   35 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n   35 (208)
                      ++|++|++++|++++. +....+..+....+.+|
T Consensus        49 ~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N   81 (168)
T 2ell_A           49 VNLEFLSLINVGLISV-SNLPKLPKLKKLELSEN   81 (168)
T ss_dssp             GGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESC
T ss_pred             CCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCC
Confidence            4566666666666655 33333444444444444

>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}

Probab=86.56  E-value=0.26  Score=45.14  Aligned_cols=36  Identities=36%  Similarity=0.513  Sum_probs=26.4

Q ss_pred             CCCCEEecccCCCcccCCCCcccCcCCcccccCCCCcC
Q 039937            2 HWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLC   39 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l~   39 (208)
                      ++|+.||||+|+|+|.+|..  +..+....+.+|+..|
T Consensus       526 ~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C  561 (844)
T 3j0a_A          526 ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFIC  561 (844)
T ss_dssp             SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCC
T ss_pred             ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccc
Confidence            36777788888888877753  5566667777888777

>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}

Probab=86.51  E-value=0.51  Score=35.63  Aligned_cols=36  Identities=14%  Similarity=0.125  Sum_probs=26.0

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNK   36 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~   36 (208)
                      +++|++|||++|++++..|.. ..+..+....+.+|.
T Consensus        80 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~  116 (220)
T 2v70_A           80 ASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR  116 (220)
T ss_dssp             CTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSC
T ss_pred             CCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCc
Confidence            468999999999999887753 334555555666663

>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8

Probab=86.32  E-value=0.37  Score=38.47  Aligned_cols=34  Identities=15%  Similarity=0.097  Sum_probs=16.6

Q ss_pred             CCCCEEecccCCCcccCCCCcccCcCCcccccCC
Q 039937            2 HWLSRIDISYNALQGPIPDSTTFRDAPMKALQGN   35 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n   35 (208)
                      ++|+.|+|++|+++|.+|....+.++....+.+|
T Consensus       221 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N  254 (313)
T 1ogq_A          221 KNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNN  254 (313)
T ss_dssp             SCCSEEECCSSEECCBGGGCCCCTTCCEEECCSS
T ss_pred             CCCCEEECCCCceeeecCcccccCCCCEEECcCC
Confidence            4555555555555555554333333433333333

>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}

Probab=86.08  E-value=0.71  Score=37.14  Aligned_cols=36  Identities=17%  Similarity=0.186  Sum_probs=19.6

Q ss_pred             CCCCCEEecccCCCcccCCCCcccCcCCcccccCCC
Q 039937            1 MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNK   36 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~   36 (208)
                      +++|++|+|++|++++..+....+.++....+.+|.
T Consensus       205 l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~  240 (328)
T 4fcg_A          205 LQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCT  240 (328)
T ss_dssp             CTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCT
T ss_pred             CCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCc
Confidence            356777777777777533332334444445555543

>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=86.08  E-value=0.48  Score=39.65  Aligned_cols=38  Identities=24%  Similarity=0.196  Sum_probs=21.3

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLC   39 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~   39 (208)
                      ++|+.|||++|+|++..|.. ..+.++....+.+|+.-|
T Consensus       255 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C  293 (440)
T 3zyj_A          255 QSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC  293 (440)
T ss_dssp             TTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred             CCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence            45666666666666544432 223445555566666655

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=85.93  E-value=0.31  Score=37.78  Aligned_cols=28  Identities=18%  Similarity=0.020  Sum_probs=24.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||++++....-|.||+.+..
T Consensus       196 ~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          196 THGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             ECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EcCCCCCCeEEEECCeEEEEEECccccc
Confidence            9999999999999887777999987654

>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}

Probab=85.84  E-value=0.64  Score=37.41  Aligned_cols=36  Identities=11%  Similarity=-0.014  Sum_probs=23.4

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNK   36 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~   36 (208)
                      +++|+.|||++|++.|.+|.. ..+.++....+.+|.
T Consensus       228 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~  264 (328)
T 4fcg_A          228 LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCS  264 (328)
T ss_dssp             CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCT
T ss_pred             CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCC
Confidence            467888888888888888764 334455555555553

>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}

Probab=85.67  E-value=0.54  Score=37.11  Aligned_cols=18  Identities=17%  Similarity=0.067  Sum_probs=10.7

Q ss_pred             CCCCEEecccCCCcccCC
Q 039937            2 HWLSRIDISYNALQGPIP   19 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip   19 (208)
                      ++|+.|||++|++++..+
T Consensus       199 ~~L~~L~L~~N~l~~~~~  216 (306)
T 2z66_A          199 SSLQVLNMSHNNFFSLDT  216 (306)
T ss_dssp             TTCCEEECTTSCCSBCCS
T ss_pred             CCCCEEECCCCccCccCh
Confidence            456666666666665444

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=85.66  E-value=0.37  Score=41.24  Aligned_cols=33  Identities=21%  Similarity=0.160  Sum_probs=16.7

Q ss_pred             CCCCEEecccCCCcccCCCCcccCcCCcccccC
Q 039937            2 HWLSRIDISYNALQGPIPDSTTFRDAPMKALQG   34 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~   34 (208)
                      ++|+.||||+|+++|..|....+..+....+.+
T Consensus       191 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~  223 (487)
T 3oja_A          191 AKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRN  223 (487)
T ss_dssp             TTCCEEECCSSCCCEECGGGGGGTTCSEEECTT
T ss_pred             CCCCEEECCCCCCCCCCHhHcCCCCccEEEecC
Confidence            456666666666666555433333333333333

>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}

Probab=85.36  E-value=0.7  Score=33.30  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=25.5

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|++++|++++..|.. ..+..+....+.+|
T Consensus        51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N   86 (177)
T 2o6r_A           51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN   86 (177)
T ss_dssp             CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             cccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence            468999999999999766653 34556666666666

>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8

Probab=85.06  E-value=0.38  Score=38.42  Aligned_cols=20  Identities=30%  Similarity=0.509  Sum_probs=13.2

Q ss_pred             CCCCCEEecccCCCcccCCC
Q 039937            1 MHWLSRIDISYNALQGPIPD   20 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~   20 (208)
                      +++|++|||++|+++|.+|.
T Consensus       100 l~~L~~L~Ls~n~l~~~~p~  119 (313)
T 1ogq_A          100 LTQLHYLYITHTNVSGAIPD  119 (313)
T ss_dssp             CTTCSEEEEEEECCEEECCG
T ss_pred             CCCCCEEECcCCeeCCcCCH
Confidence            35666777777777766665

>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A

Probab=84.76  E-value=0.74  Score=34.72  Aligned_cols=36  Identities=14%  Similarity=0.079  Sum_probs=24.7

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNK   36 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~   36 (208)
                      +++|++|||++|++++-.|.. ..+.++....+.+|.
T Consensus        79 l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~  115 (220)
T 2v9t_B           79 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK  115 (220)
T ss_dssp             CSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred             CcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCC
Confidence            468999999999999544432 345556666666663

>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}

Probab=84.74  E-value=0.79  Score=35.55  Aligned_cols=35  Identities=14%  Similarity=0.182  Sum_probs=20.6

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.|+|++|++++..|.. ..+.++....+.+|
T Consensus       156 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N  191 (270)
T 2o6q_A          156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN  191 (270)
T ss_dssp             CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred             CcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence            357778888888777755532 23344444445455

>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}

Probab=84.73  E-value=0.75  Score=37.15  Aligned_cols=38  Identities=24%  Similarity=0.349  Sum_probs=29.6

Q ss_pred             CCCCCEEecccCCCcccCCCC--cccCcCCcccccCCCCcC
Q 039937            1 MHWLSRIDISYNALQGPIPDS--TTFRDAPMKALQGNKRLC   39 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~~l~   39 (208)
                      +++|+.|||++|+++ .+|..  ..+.++....+.+|+..|
T Consensus       276 l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~  315 (353)
T 2z80_A          276 ISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC  315 (353)
T ss_dssp             CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred             ccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccC
Confidence            468999999999999 67764  345667777788887666

>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A

Probab=84.38  E-value=0.63  Score=39.09  Aligned_cols=38  Identities=24%  Similarity=0.205  Sum_probs=16.7

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLC   39 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~   39 (208)
                      ++|+.|||++|+|++..|.. ..+.++....+.+|+.-|
T Consensus       266 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C  304 (452)
T 3zyi_A          266 ASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC  304 (452)
T ss_dssp             TTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred             CCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence            34555555555555433322 123333444444554444

>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}

Probab=84.12  E-value=0.59  Score=37.19  Aligned_cols=35  Identities=17%  Similarity=0.218  Sum_probs=24.8

Q ss_pred             CCCCCEEecccCCCcccCCCC---cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS---TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~---~~~~~~~~~~~~~n   35 (208)
                      +++|++|||++|+++|.+|..   ..+.++....+.+|
T Consensus        94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N  131 (312)
T 1wwl_A           94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNV  131 (312)
T ss_dssp             TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESC
T ss_pred             cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCC
Confidence            467899999999999988875   33455555555555

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=84.06  E-value=0.35  Score=38.57  Aligned_cols=28  Identities=18%  Similarity=-0.039  Sum_probs=24.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||+++++....+.||+.+..
T Consensus       190 iHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          190 IHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             ECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CCCCCCccCEEEeCCceEEEecchhccC
Confidence            9999999999999876668999987654

>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A

Probab=83.84  E-value=0.91  Score=35.84  Aligned_cols=35  Identities=17%  Similarity=0.150  Sum_probs=21.4

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.|+|++|+|++..+.. ..+.++....+.+|
T Consensus       147 l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N  182 (290)
T 1p9a_G          147 TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN  182 (290)
T ss_dssp             CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred             ccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC
Confidence            357888888888888544432 23445555555555

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=83.76  E-value=0.4  Score=38.89  Aligned_cols=29  Identities=10%  Similarity=-0.057  Sum_probs=24.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFF  119 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~  119 (208)
                      +|+|+.+.||++++...+.|.||+.+..-
T Consensus       225 ~HgDl~~~Nil~~~~~~~~vIDwe~a~~g  253 (357)
T 3ats_A          225 LWGDARVGNVLYRDFQPVAVLDWEMVALG  253 (357)
T ss_dssp             ECSSCSGGGEEEETTEEEEECCGGGCEEE
T ss_pred             EeCCCCCCeEEEeCCcEEEEEcccccccC
Confidence            89999999999996555789999887653

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=83.58  E-value=0.48  Score=38.05  Aligned_cols=30  Identities=23%  Similarity=0.093  Sum_probs=25.7

Q ss_pred             hhcCcCCCceeeCCC----CcEEEcccceeeeec
Q 039937           91 ISFTTSSKNGLLDLE----YEARAFDFGIAKFFK  120 (208)
Q Consensus        91 iH~dlk~~nilld~~----~~~kl~dfgl~~~~~  120 (208)
                      +|+|+.+.||+++.+    ..+.+.||+.+..-.
T Consensus       186 vHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~  219 (333)
T 3csv_A          186 VHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH  219 (333)
T ss_dssp             ECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred             EeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence            999999999999874    678999999876543

>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}

Probab=83.55  E-value=0.89  Score=34.46  Aligned_cols=35  Identities=14%  Similarity=0.100  Sum_probs=21.2

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.|+|++|++++..|.. ..+.++....+.+|
T Consensus        63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N   98 (229)
T 3e6j_A           63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN   98 (229)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence            457888888888885444432 33455555555555

>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*

Probab=83.37  E-value=0.56  Score=41.08  Aligned_cols=34  Identities=21%  Similarity=0.387  Sum_probs=20.8

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.||||+|+|+ .||.. ..+.++....+.+|
T Consensus       462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N  496 (567)
T 1dce_A          462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDN  496 (567)
T ss_dssp             GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred             cccCcEeecCccccc-ccchhhhcCCCCCEEECCCC
Confidence            357788888888887 67753 33444444445454

>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4

Probab=82.88  E-value=0.55  Score=33.95  Aligned_cols=33  Identities=18%  Similarity=0.166  Sum_probs=23.2

Q ss_pred             CCCCEEecccCCCcccCCCCcccCcCCcccccCC
Q 039937            2 HWLSRIDISYNALQGPIPDSTTFRDAPMKALQGN   35 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n   35 (208)
                      ++|+.||+|+|++++. +....+..+....+.+|
T Consensus        42 ~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N   74 (176)
T 1a9n_A           42 DQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNN   74 (176)
T ss_dssp             TCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSS
T ss_pred             CCCCEEECCCCCCCcc-cccccCCCCCEEECCCC
Confidence            3788999999999875 55455556666666555

>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A

Probab=82.42  E-value=0.96  Score=32.20  Aligned_cols=35  Identities=11%  Similarity=0.089  Sum_probs=27.8

Q ss_pred             CCCCEEecccCCCc-ccCCCC-cccCcCCcccccCCC
Q 039937            2 HWLSRIDISYNALQ-GPIPDS-TTFRDAPMKALQGNK   36 (208)
Q Consensus         2 ~~L~~l~ls~N~l~-g~ip~~-~~~~~~~~~~~~~n~   36 (208)
                      ++|+.|++++|+++ |.+|.. ..+..+....+.+|.
T Consensus        24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~   60 (168)
T 2ell_A           24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVG   60 (168)
T ss_dssp             TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSC
T ss_pred             ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCC
Confidence            57999999999998 999986 556666666666663

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=82.26  E-value=0.62  Score=37.18  Aligned_cols=30  Identities=27%  Similarity=0.220  Sum_probs=24.4

Q ss_pred             hhcCcCCCceeeCC---CCc-EEEcccceeeeec
Q 039937           91 ISFTTSSKNGLLDL---EYE-ARAFDFGIAKFFK  120 (208)
Q Consensus        91 iH~dlk~~nilld~---~~~-~kl~dfgl~~~~~  120 (208)
                      +|+|+++.||+++.   ++. ..|.||+.+..-.
T Consensus       193 ~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd  226 (306)
T 3tdw_A          193 IHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD  226 (306)
T ss_dssp             ECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred             EeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence            99999999999987   344 5899999776543

>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}

Probab=82.02  E-value=0.87  Score=40.23  Aligned_cols=40  Identities=10%  Similarity=0.230  Sum_probs=28.4

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLCG   40 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~   40 (208)
                      +++|++|+|++|+++|.+|.. ..+.++....+.+|..+.+
T Consensus       248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~  288 (636)
T 4eco_A          248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISG  288 (636)
T ss_dssp             CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCH
T ss_pred             cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCcc
Confidence            468999999999999999975 3455666666666643443

>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A

Probab=81.85  E-value=0.69  Score=36.57  Aligned_cols=40  Identities=23%  Similarity=0.319  Sum_probs=26.9

Q ss_pred             CCCCCEEecccCCCcccCCCCcccC--cCCcccccCCCCcCCCc
Q 039937            1 MHWLSRIDISYNALQGPIPDSTTFR--DAPMKALQGNKRLCGDI   42 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~~~~~--~~~~~~~~~n~~l~~~~   42 (208)
                      +++|+.||||+|++++. ..-..+.  .+....+.||+ +|+..
T Consensus       195 l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Np-l~~~~  236 (267)
T 3rw6_A          195 APNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNS-LCDTF  236 (267)
T ss_dssp             STTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTST-TGGGC
T ss_pred             CCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCc-Ccccc
Confidence            57899999999999986 2222333  55556666775 66543

>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}

Probab=81.83  E-value=1.1  Score=38.46  Aligned_cols=35  Identities=17%  Similarity=0.279  Sum_probs=20.6

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|+.|||++|++++.+|.. ..+.++....+.+|
T Consensus       469 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n  504 (570)
T 2z63_A          469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN  504 (570)
T ss_dssp             CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred             ccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence            356777777777777776653 23344444444444

>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}

Probab=81.58  E-value=1.1  Score=35.59  Aligned_cols=21  Identities=24%  Similarity=0.226  Sum_probs=14.4

Q ss_pred             CCCCCEEecccCCCcccCCCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS   21 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~   21 (208)
                      +++|++||||+|++++.+|..
T Consensus       223 l~~L~~L~Ls~N~l~~~~p~~  243 (310)
T 4glp_A          223 GVQPHSLDLSHNSLRATVNPS  243 (310)
T ss_dssp             TCCCSSEECTTSCCCCCCCSC
T ss_pred             CCCCCEEECCCCCCCccchhh
Confidence            356777777777777776643

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=81.54  E-value=0.66  Score=39.65  Aligned_cols=16  Identities=19%  Similarity=0.385  Sum_probs=9.9

Q ss_pred             CCCCEEecccCCCccc
Q 039937            2 HWLSRIDISYNALQGP   17 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~   17 (208)
                      ++|+.|||++|++++.
T Consensus       169 ~~L~~L~Ls~N~l~~~  184 (487)
T 3oja_A          169 DTLEHLNLQYNFIYDV  184 (487)
T ss_dssp             TTCCEEECTTSCCCEE
T ss_pred             CcccEEecCCCccccc
Confidence            4566666666666655

>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}

Probab=81.22  E-value=1.3  Score=38.25  Aligned_cols=17  Identities=24%  Similarity=0.444  Sum_probs=9.4

Q ss_pred             CCCEEecccCCCcccCCC
Q 039937            3 WLSRIDISYNALQGPIPD   20 (208)
Q Consensus         3 ~L~~l~ls~N~l~g~ip~   20 (208)
                      +|+.|||++|+++ .||.
T Consensus       451 ~L~~L~L~~N~l~-~ip~  467 (562)
T 3a79_B          451 KVKVLDLHNNRIM-SIPK  467 (562)
T ss_dssp             TCSEEECCSSCCC-CCCT
T ss_pred             cCCEEECCCCcCc-ccCh
Confidence            4555666666555 4444

>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*

Probab=81.17  E-value=1.2  Score=37.02  Aligned_cols=35  Identities=26%  Similarity=0.293  Sum_probs=22.9

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|||++|++++.+|.. ..+.++....+.+|
T Consensus       346 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N  381 (455)
T 3v47_A          346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN  381 (455)
T ss_dssp             CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred             cccCCEEECCCCcccccChhhccccccccEEECCCC
Confidence            467888888888888877754 33445555555555

>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*

Probab=81.11  E-value=1.1  Score=34.01  Aligned_cols=18  Identities=22%  Similarity=0.196  Sum_probs=11.1

Q ss_pred             CCCCEEeccc-CCCcccCC
Q 039937            2 HWLSRIDISY-NALQGPIP   19 (208)
Q Consensus         2 ~~L~~l~ls~-N~l~g~ip   19 (208)
                      ++|++|++++ |++++..|
T Consensus        80 ~~L~~L~l~~~n~l~~i~~   98 (239)
T 2xwt_C           80 SKVTHIEIRNTRNLTYIDP   98 (239)
T ss_dssp             TTCCEEEEEEETTCCEECT
T ss_pred             cCCcEEECCCCCCeeEcCH
Confidence            4666666666 66665444

>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}

Probab=81.03  E-value=1.3  Score=32.73  Aligned_cols=35  Identities=17%  Similarity=0.148  Sum_probs=23.6

Q ss_pred             CCCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      +++|++|+|++|++++..|.. ..+.++....+.+|
T Consensus        51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n   86 (208)
T 2o6s_A           51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN   86 (208)
T ss_dssp             CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred             cccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence            467899999999998655543 34555555556555

>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A

Probab=80.61  E-value=1.4  Score=30.59  Aligned_cols=34  Identities=6%  Similarity=0.079  Sum_probs=26.2

Q ss_pred             CCCCEEecccCCCc-ccCCCC-cccCcCCcccccCC
Q 039937            2 HWLSRIDISYNALQ-GPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         2 ~~L~~l~ls~N~l~-g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      ++|+.|++++|+++ |.+|.. ..+..+....+.+|
T Consensus        17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n   52 (149)
T 2je0_A           17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINV   52 (149)
T ss_dssp             GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTS
T ss_pred             ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCC
Confidence            46999999999999 899875 44566666666666

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=80.36  E-value=0.67  Score=36.97  Aligned_cols=27  Identities=15%  Similarity=-0.033  Sum_probs=23.4

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFF  119 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~  119 (208)
                      +|+|+++.||+++ + .+.+.||+.+..-
T Consensus       198 ~HgD~~~~Nil~~-~-~~~lIDfe~a~~g  224 (328)
T 1zyl_A          198 LHGDCHAGNILWR-D-GPMFVDLDDARNG  224 (328)
T ss_dssp             CCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred             eeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence            8999999999999 4 8899999876543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	208
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-08
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-06
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	5e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-06
d1ogqa_	313	c.10.2.8 (A:) Polygalacturonase inhibiting protein	2e-05
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-04
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-04
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-04
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-04
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-04
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-04
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	8e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	0.001
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	0.001
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	0.002
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.002
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	0.003
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	0.004
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	0.004

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 6e-08
 Identities = 19/72 (26%), Positives = 30/72 (41%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
             N  LD +   +  DFG+A+    D+S      GT  Y++ E    +   +K  + S G
Sbjct: 142 PANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLG 201

Query: 157 LLALEVMKGKHP 168
            L  E+     P
Sbjct: 202 CLLYELCALMPP 213

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 3e-07
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
             N L++   E +  DFG++    L  S      GT  Y++ E       + +  + S G
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQ--LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190

Query: 157 LLALEVMKGKHP 168
           L  +E+  G++P
Sbjct: 191 LSLVEMAVGRYP 202

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 6e-07
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 99  NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
           N LL    E +  DFG +      SS RT L GT  Y+  E+       +K  + S G+L
Sbjct: 136 NLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 193

Query: 159 ALEVMKGKHP 168
             E + GK P
Sbjct: 194 CYEFLVGKPP 203

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 20/73 (27%), Positives = 37/73 (50%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
            S N LL ++   +  DFG       + S R+ + GT  ++A E+        K  + S 
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

Query: 156 GLLALEVMKGKHP 168
           G++A+E+++G+ P
Sbjct: 203 GIMAIEMIEGEPP 215

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLK---VAKKCG 151
           S N  L  +   +  DFG+A      S +    +L+G+  ++A E+         + +  
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191

Query: 152 MHSSGLLALEVMKGKHP 168
           +++ G++  E+M G+ P
Sbjct: 192 VYAFGIVLYELMTGQLP 208

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 97  SKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
             N  +       +  D G+A      +S    + GT  ++A E+ Y  K  +   +++ 
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATL--KRASFAKAVIGTPEFMAPEM-YEEKYDESVDVYAF 198

Query: 156 GLLALEVMKGKHP 168
           G+  LE+   ++P
Sbjct: 199 GMCMLEMATSEYP 211

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 3e-06
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMHS 154
           ++N L+      +  DFG+AK    +              ++ALE         +  + S
Sbjct: 139 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 198

Query: 155 SGLLALEVMKGKHP 168
            G+   E+M     
Sbjct: 199 YGVTVWELMTFGSK 212

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 5e-06
 Identities = 23/75 (30%), Positives = 32/75 (42%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
              N LLD +   +  DFG+ K   L  +      GT  YIA E+    K        S 
Sbjct: 130 KLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSF 189

Query: 156 GLLALEVMKGKHPRH 170
           G+L  E++ G+ P H
Sbjct: 190 GVLLYEMLIGQSPFH 204

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 9e-06
 Identities = 18/72 (25%), Positives = 31/72 (43%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
            +N +LD +   +  DFG+ K    D +      GT  Y+A E+       +       G
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192

Query: 157 LLALEVMKGKHP 168
           ++  E+M G+ P
Sbjct: 193 VVMYEMMCGRLP 204

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Polygalacturonase inhibiting protein PGIP
domain: Polygalacturonase inhibiting protein PGIP
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 42.4 bits (98), Expect = 2e-05
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 1   MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSC 48
           + +L  +++S+N L G IP     +   + A   NK LCG     P+C
Sbjct: 267 LKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG--SPLPAC 312

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 99  NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-----KVAKKCGMH 153
           N L  L+ + +  DFG++         R    GT  ++A E+             K  + 
Sbjct: 140 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 199

Query: 154 SSGLLALEVMKGKHPRH 170
           S G+  +E+ + + P H
Sbjct: 200 SLGITLIEMAEIEPPHH 216

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 4e-05
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 99  NGLLDLEYEARAFDFGIAKFFKLDSSN--RTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
           N LL+ +   +  DFG AK    +S         GT  Y++ EL       K   + + G
Sbjct: 138 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALG 197

Query: 157 LLALEVMKGKHP 168
            +  +++ G  P
Sbjct: 198 CIIYQLVAGLPP 209

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 3/100 (3%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMH 153
            +N LLD     +  DFG+A  F+ ++  R   ++ GT  Y+A EL    +  A+   + 
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 190

Query: 154 SSGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPR 193
           S G++   ++ G+ P       C   S++      +   +
Sbjct: 191 SCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK 230

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFF-KLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHS 154
           +++N L++ +   +  DFG++++    + ++         +   E+    K + K  + +
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186

Query: 155 SGLLALEVM-KGKHP 168
            G+L  E+   GK P
Sbjct: 187 FGVLMWEIYSLGKMP 201

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGM 152
           +++N L++     +  DFG+++  + D       +       + A E     K      +
Sbjct: 137 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 196

Query: 153 HSSGLLALEVMKGKHPRHFIFS 174
            S G++  EVM      ++  S
Sbjct: 197 WSFGIVMWEVMTYGERPYWELS 218

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
           + N L+      +  DFG+A+  + +  + R        + A E     +   K  + S 
Sbjct: 141 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 200

Query: 156 GLLALEVMKGKHP 168
           G+L  E+      
Sbjct: 201 GILLTELTTKGRV 213

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 9/75 (12%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKVAKKCGMH 153
           +++N L+      +  DFG+++        +     A    ++  E  +  +   +  + 
Sbjct: 167 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW 226

Query: 154 SSGLLALEVMKGKHP 168
           + G++  E+      
Sbjct: 227 AYGVVLWEIFSYGLQ 241

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 3e-04
 Identities = 11/76 (14%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNR-TELAGTYGYIALELTYTLKVAKKCGMHSS 155
           ++N L+      +  DFG++++ +  +  + ++      ++A E     +      +   
Sbjct: 136 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 195

Query: 156 GLLALEVM-KGKHPRH 170
           G+   E++  G  P  
Sbjct: 196 GVCMWEILMHGVKPFQ 211

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
           ++N L+  +  A+  DFG+ K     SS +        + A E     K + K  + S G
Sbjct: 131 ARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 187

Query: 157 LLALEVMKGKHP 168
           +L  E+      
Sbjct: 188 ILLWEIYSFGRV 199

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTE--LAGTYGYIALELTYTLKVAKKCGMH 153
           +++N L+      +  DFG+A+    DS+            ++A E  +      K  + 
Sbjct: 191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 250

Query: 154 SSGLLALEVMKGKHP 168
           S G+L  E+      
Sbjct: 251 SYGILLWEIFSLGVN 265

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 79  LRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIAL 138
           ++Y  +  +        +     LD + +    DFG++K      S  +   GT GY+A 
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGTPGYVAP 178

Query: 139 ELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
           E+      +K     S G++A  ++ G  P
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 208

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.2 bits (88), Expect = 4e-04
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
            +N LLD     +  DFG AK+          L GT  YIA E+  T    K     S G
Sbjct: 132 PENILLDKNGHIKITDFGFAKYV---PDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFG 188

Query: 157 LLALEVMKGKHP 168
           +L  E++ G  P
Sbjct: 189 ILIYEMLAGYTP 200

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 5e-04
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 97  SKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALE-LTYTLKVAKKCGMHS 154
            +N L+DL   E +  DFG     K   +  T+  GT  Y   E + Y     +   + S
Sbjct: 138 DENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195

Query: 155 SGLLALEVMKGKHP 168
            G+L  +++ G  P
Sbjct: 196 LGILLYDMVCGDIP 209

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 5e-04
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 2/104 (1%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTE-LAGTYGYIALELTYTLKVAKKCGMHS 154
           +++N L+      +  DFG+ +F   D    +        + + E+    + + K  + S
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187

Query: 155 SGLLALEVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHH 198
            G+L  EV       +   S  S     +     +  PR    H
Sbjct: 188 FGVLMWEVFSEGKIPYENRSN-SEVVEDISTGFRLYKPRLASTH 230

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 5e-04
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 98  KNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYTLKVAKKCGMH 153
           +N +LD ++  +  DFG+A+           N+T       ++ALE   T K   K  + 
Sbjct: 159 RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 218

Query: 154 SSGLLALEVMKGKHP 168
           S G+L  E+M    P
Sbjct: 219 SFGVLLWELMTRGAP 233

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 6e-04
 Identities = 18/118 (15%), Positives = 40/118 (33%), Gaps = 17/118 (14%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSN----RTELAGTYGYIALEL------TYTLKV 146
           SKN L+         D G+A      +           GT  Y+A E+          + 
Sbjct: 136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 195

Query: 147 AKKCGMHSSGLLALEVMKGKHP-------RHFIFSICSSSSNFVIAPHEILDPRFQPH 197
            K+  +++ GL+  E+ +           +   + +  S  +       + + + +P+
Sbjct: 196 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN 253

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 6e-04
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSN--RTELAGTYGYIALELTYTLKVAKKCGMH 153
           +++N LL  +   +  DFG+A+    D     + +      ++A E  +      +  + 
Sbjct: 161 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 220

Query: 154 SSGLLALEVMKGKHP 168
           S G+L  E+      
Sbjct: 221 SFGVLLWEIFSLGAS 235

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (86), Expect = 7e-04
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA-----GTYGYIALELTYTLKVAKKCG 151
           ++N L++     +  DFG+++F + D+S+ T  +         + A E     K      
Sbjct: 156 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 215

Query: 152 MHSSGLLALEVM-KGKHP 168
           + S G++  EVM  G+ P
Sbjct: 216 VWSYGIVMWEVMSYGERP 233

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 7e-04
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGM 152
           +++N LL      +  DFG+ +    +  +   +      + + A E   T   +     
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197

Query: 153 HSSGLLALEVM-KGKHP 168
              G+   E+   G+ P
Sbjct: 198 WMFGVTLWEMFTYGQEP 214

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (85), Expect = 8e-04
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSNR-TELAGTYGYIALELTYTLKVAKKCGMHS 154
           +++N L+   +  +  DFG+++    D+            + A E     K + K  + +
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201

Query: 155 SGLLALEVMKGKHP 168
            G+L  E+      
Sbjct: 202 FGVLLWEIATYGMS 215

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 8e-04
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVA-KKCGMHSS 155
             N LLD     +  DFG+AK F   +   T    T  Y A EL +  ++      M + 
Sbjct: 128 PNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAV 187

Query: 156 GLLALEVMKGKHP 168
           G +  E++     
Sbjct: 188 GCILAELLLRVPF 200

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 8e-04
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
           ++N L+   Y A+  DFG+++  +     +T       ++A+E            + S G
Sbjct: 155 ARNILVGENYVAKIADFGLSRGQE-VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 213

Query: 157 LLALEVMKGKHP 168
           +L  E++     
Sbjct: 214 VLLWEIVSLGGT 225

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.001
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGMH 153
           ++N LL  ++ A+  DFG++K  + D +    +T       + A E     K + K  + 
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194

Query: 154 SSGLLALEVM-KGKHP 168
           S G+L  E    G+ P
Sbjct: 195 SFGVLMWEAFSYGQKP 210

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAK---KCGMH 153
           + N LL      +  DFG A       +      GT  ++A E+   +   +   K  + 
Sbjct: 143 AGNILLSEPGLVKLGDFGSASIM----APANSFVGTPYWMAPEVILAMDEGQYDGKVDVW 198

Query: 154 SSGLLALEVMKGKHP 168
           S G+  +E+ + K P
Sbjct: 199 SLGITCIELAERKPP 213

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 96  SSKNGLLDLEYEARAFDFGIAKFFKLDSSN---RTELAGTYGYIALELTYTLKVAKKCGM 152
           +++N LL   + A+  DFG++K    D S    R+       + A E     K + +  +
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 195

Query: 153 HSSGLLALEVM-KGKHP 168
            S G+   E +  G+ P
Sbjct: 196 WSYGVTMWEALSYGQKP 212

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 97  SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTE---LAGTYGYIALELTYTLKVAKKCGMH 153
             N ++      +  DFGIA+      ++ T+   + GT  Y++ E      V  +  ++
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198

Query: 154 SSGLLALEVMKGKHP 168
           S G +  EV+ G+ P
Sbjct: 199 SLGCVLYEVLTGEPP 213

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 111 FDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
            +FG A+  K   + R  L     Y A E+     V+    M S G L   ++ G +P
Sbjct: 146 IEFGQARQLKPGDNFRL-LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 34.9 bits (79), Expect = 0.004
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 101 LLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALE-LTYTLKVAKKCGMHSSGLLA 159
           L++ E E +  DFG+A+ F +     T    T  Y A + L  + K +    + S G + 
Sbjct: 132 LINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF 191

Query: 160 LEVMKGKHP 168
            E++ G   
Sbjct: 192 AEMVNGTPL 200

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.004
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
           DFG+A       +    + GT  ++A E+     +  +  M S G++   ++ G  P
Sbjct: 160 DFGLAHKID-FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	208
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.96
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.96
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.95
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.95
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.95
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.95
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.95
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.95
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.95
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.95
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.95
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.95
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.95
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.95
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.94
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.94
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.94
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.94
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.94
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.94
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.94
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.94
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.93
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.93
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.93
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.93
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.93
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.93
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.92
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.92
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.92
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.92
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.92
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.92
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.92
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.92
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.91
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.91
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.91
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.91
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.9
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.9
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.9
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.9
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.89
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.87
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.85
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.85
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.82
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.26
d1p9ag_	266	von Willebrand factor binding domain of glycoprote	93.31
d2ifga3	156	High affinity nerve growth factor receptor, N-term	90.86
d1w8aa_	192	Slit {Fruit fly (Drosophila melanogaster) [TaxId:	90.79
d1ogqa_	313	Polygalacturonase inhibiting protein PGIP {Kidney	90.63
d1dcea3	124	Rab geranylgeranyltransferase alpha-subunit, C-ter	86.52
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	85.47
d1a9na_	162	Splicesomal U2A' protein {Human (Homo sapiens) [Ta	85.23
d1dcea3	124	Rab geranylgeranyltransferase alpha-subunit, C-ter	85.19
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	84.92
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	82.6
d1w8aa_	192	Slit {Fruit fly (Drosophila melanogaster) [TaxId:	81.72
d2ifga3	156	High affinity nerve growth factor receptor, N-term	80.58

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.3e-30  Score=206.92  Aligned_cols=121  Identities=17%  Similarity=0.179  Sum_probs=84.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCcccccccccccccccccc---CCcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYT---LKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~S~Gv  157 (208)
                      +|||++  +||||||+|||++.++.+||+|||+++.....  ........||+.|||||.+..   ..++.++|||||||
T Consensus       118 ~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv  197 (276)
T d1uwha_         118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI  197 (276)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHH
T ss_pred             HHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHH
Confidence            345544  99999999999999999999999999876543  223345678999999999863   35789999999999


Q ss_pred             HHHHHHcCCCCcc------cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          158 LALEVMKGKHPRH------FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       158 vl~elltg~~p~~------~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|||+||+.|..      .+...+.......  ....+.+.+...+.++...|++
T Consensus       198 ~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~l~~li~~cl~  251 (276)
T d1uwha_         198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSP--DLSKVRSNCPKAMKRLMAECLK  251 (276)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCC--CGGGSCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC--cchhccccchHHHHHHHHHHcC
Confidence            9999999999922      1222222222211  2233455566678888888875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.1e-30  Score=207.59  Aligned_cols=122  Identities=16%  Similarity=0.093  Sum_probs=81.8

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC---CCccccccccccccccccccCCcCcccchHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL  157 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gv  157 (208)
                      ..+|||+.  +||||||+|||++.++.+||+|||+++......   .......||+.|+|||.+....++.++|||||||
T Consensus       122 gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gv  201 (283)
T d1mqba_         122 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGI  201 (283)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHH
T ss_pred             hhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHH
Confidence            34455555  999999999999999999999999998765431   1223456789999999999999999999999999


Q ss_pred             HHHHHHcCCCC---cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          158 LALEVMKGKHP---RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       158 vl~elltg~~p---~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|||++|..|   .....+..... .++  ...-....+..++.++..+|++
T Consensus       202 il~el~t~~~~~~~~~~~~~~~~~i-~~~--~~~~~~~~~~~~l~~li~~cl~  251 (283)
T d1mqba_         202 VMWEVMTYGERPYWELSNHEVMKAI-NDG--FRLPTPMDCPSAIYQLMMQCWQ  251 (283)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHH-HTT--CCCCCCTTCBHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCCccccCCHHHHHHHH-hcc--CCCCCchhhHHHHHHHHHHHCc
Confidence            99999997665   12222222222 222  1122334456678888888875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-29  Score=206.08  Aligned_cols=86  Identities=26%  Similarity=0.392  Sum_probs=75.9

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..+|||++  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+....++.++||||+||++|
T Consensus       128 aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvily  207 (293)
T d1yhwa1         128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI  207 (293)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHH
Confidence            34456655  9999999999999999999999999998765544445668999999999999888999999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+||+.|
T Consensus       208 emltG~~P  215 (293)
T d1yhwa1         208 EMIEGEPP  215 (293)
T ss_dssp             HHHHSSCT
T ss_pred             HHhhCCCC
Confidence            99999999

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=6.2e-30  Score=208.16  Aligned_cols=120  Identities=18%  Similarity=0.202  Sum_probs=77.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC-----CccccccccccccccccccCCcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS-----NRTELAGTYGYIALELTYTLKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gv  157 (208)
                      +|||++  +||||||+|||++.++.+||+|||+++.......     ......+|+.|+|||.+....++.++|||||||
T Consensus       142 ~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gv  221 (299)
T d1jpaa_         142 KYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGI  221 (299)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHH
T ss_pred             HHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchH
Confidence            455554  9999999999999999999999999987654311     112345788999999999899999999999999


Q ss_pred             HHHHHHc-CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          158 LALEVMK-GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       158 vl~ellt-g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|||+| |+.|.  ....+.+.......+   .-....+...+.++..+|++
T Consensus       222 vl~el~t~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~cl~  271 (299)
T d1jpaa_         222 VMWEVMSYGERPYWDMTNQDVINAIEQDYR---LPPPMDCPSALHQLMLDCWQ  271 (299)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCccchHHHHHHHHHHcC
Confidence            9999998 88882  222233222222211   11234556677888888876

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.5e-30  Score=206.05  Aligned_cols=114  Identities=18%  Similarity=0.157  Sum_probs=78.0

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCCC--
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP--  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p--  168 (208)
                      +||||||+|||++.++.+||+|||+++.............||+.|+|||.+....++.++||||+||++|||+||+.|  
T Consensus       136 iHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~  215 (269)
T d2java1         136 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT  215 (269)
T ss_dssp             ----CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             EeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCC
Confidence            899999999999999999999999998876554444556899999999999988999999999999999999999999  


Q ss_pred             cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ..+..+....... .. . ..+...+..++..+..+|++
T Consensus       216 ~~~~~~~~~~i~~-~~-~-~~~~~~~s~~l~~li~~~L~  251 (269)
T d2java1         216 AFSQKELAGKIRE-GK-F-RRIPYRYSDELNEIITRMLN  251 (269)
T ss_dssp             CSSHHHHHHHHHH-TC-C-CCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHc-CC-C-CCCCcccCHHHHHHHHHHcC
Confidence            2223332222221 21 2 12345566677888888875

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.5e-30  Score=204.68  Aligned_cols=120  Identities=13%  Similarity=0.092  Sum_probs=88.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .|||.+  +||||||+|||++.++.+||+|||+++...... .......|++.|+|||.+....++.++|||||||++||
T Consensus       123 ~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~e  202 (272)
T d1qpca_         123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE  202 (272)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHH
Confidence            455544  999999999999999999999999999876542 22334578899999999998899999999999999999


Q ss_pred             HHcCCCC---cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMKGKHP---RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 lltg~~p---~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+||..|   .....+...... .+  ........+..++..+...|++
T Consensus       203 llt~~~~~~~~~~~~~~~~~i~-~~--~~~~~p~~~~~~l~~li~~cl~  248 (272)
T d1qpca_         203 IVTHGRIPYPGMTNPEVIQNLE-RG--YRMVRPDNCPEELYQLMRLCWK  248 (272)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHH-TT--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             HHhCCCCCCCCCCHHHHHHHHH-hc--CCCCCcccChHHHHHHHHHHcC
Confidence            9997665   222222222222 11  1222344566688888888876

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.5e-29  Score=200.19  Aligned_cols=118  Identities=20%  Similarity=0.164  Sum_probs=88.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|||+.  +||||||+|||++.++.+||+|||+++.....  ......||+.|+|||.+.+..++.++||||+||++||
T Consensus       119 l~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~--~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilye  196 (263)
T d2j4za1         119 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE  196 (263)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC--CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             HHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC--cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHH
Confidence            3455554  99999999999999999999999999766533  2345679999999999998889999999999999999


Q ss_pred             HHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 lltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |++|+.|  ..+..+.........    -.+++.+...+..+-..|++
T Consensus       197 ll~G~~Pf~~~~~~~~~~~i~~~~----~~~p~~~s~~~~~li~~~L~  240 (263)
T d2j4za1         197 FLVGKPPFEANTYQETYKRISRVE----FTFPDFVTEGARDLISRLLK  240 (263)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHTTC----CCCCTTSCHHHHHHHHHHTC
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcCC----CCCCccCCHHHHHHHHHHcc
Confidence            9999999  223333333332222    11234455566777777765

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.4e-29  Score=206.24  Aligned_cols=85  Identities=22%  Similarity=0.277  Sum_probs=75.1

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|+|++  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+....++.++||||+||++||
T Consensus       118 l~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilye  197 (337)
T d1o6la_         118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE  197 (337)
T ss_dssp             HHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHH
T ss_pred             hhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHH
Confidence            3455555  99999999999999999999999999876654444556789999999999999999999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       198 ml~G~~p  204 (337)
T d1o6la_         198 MMCGRLP  204 (337)
T ss_dssp             HHHSSCS
T ss_pred             HHHCCCC
Confidence            9999999

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.3e-29  Score=202.14  Aligned_cols=119  Identities=18%  Similarity=0.241  Sum_probs=86.1

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +|+|..  +||||||+|||+++++.+|++|||+++.....  ........||+.|+|||.+....++.++||||+||++|
T Consensus       122 ~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvily  201 (288)
T d1uu3a_         122 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIY  201 (288)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             HhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHH
Confidence            344444  99999999999999999999999999987543  22334567999999999999889999999999999999


Q ss_pred             HHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|+.|  ..+..+.........  .  .++..+..++..+-..|++
T Consensus       202 ell~g~~Pf~~~~~~~~~~~i~~~~--~--~~p~~~s~~~~~li~~~L~  246 (288)
T d1uu3a_         202 QLVAGLPPFRAGNEYLIFQKIIKLE--Y--DFPEKFFPKARDLVEKLLV  246 (288)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHTTC--C--CCCTTCCHHHHHHHHTTSC
T ss_pred             HHhhCCCCCCCcCHHHHHHHHHcCC--C--CCCccCCHHHHHHHHHHcc
Confidence            99999999  223333333333222  1  1344566677777777765

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-29  Score=203.35  Aligned_cols=85  Identities=25%  Similarity=0.352  Sum_probs=72.1

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCc-CcccchHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLL  158 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvv  158 (208)
                      .+|||+.  +||||||+|||++.++.+||+|||+++.....  ........||+.|+|||.+....+ +.++||||+||+
T Consensus       116 l~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvi  195 (271)
T d1nvra_         116 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV  195 (271)
T ss_dssp             HHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHH
Confidence            3455555  99999999999999999999999999976543  223345679999999999887765 578999999999


Q ss_pred             HHHHHcCCCC
Q 039937          159 ALEVMKGKHP  168 (208)
Q Consensus       159 l~elltg~~p  168 (208)
                      +|||+||+.|
T Consensus       196 lyeml~G~~p  205 (271)
T d1nvra_         196 LTAMLAGELP  205 (271)
T ss_dssp             HHHHHHSSCS
T ss_pred             HHHHHhCCCC
Confidence            9999999999

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-29  Score=205.54  Aligned_cols=115  Identities=17%  Similarity=0.137  Sum_probs=79.3

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH-  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~-  167 (208)
                      +||||||+|||++.++.+||+|||+++......  .......||+.|+|||.+....++.++|||||||++|||+||.. 
T Consensus       156 vHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~  235 (299)
T d1ywna1         156 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  235 (299)
T ss_dssp             CCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCC
Confidence            999999999999999999999999998765442  22345678999999999999999999999999999999999765 


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  .....+.+...+.++.  ...+...+..++..+..+|++
T Consensus       236 p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~  275 (299)
T d1ywna1         236 PYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWH  275 (299)
T ss_dssp             SSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHcC
Confidence            4  1122222222222221  112234455677888888875

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.5e-29  Score=199.46  Aligned_cols=119  Identities=17%  Similarity=0.148  Sum_probs=75.9

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      |+|..  +||||||+|||+|.++.+||+|||+++..... ........||+.|+|||.+....++.++|||||||++|||
T Consensus       116 ~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el  195 (263)
T d1sm2a_         116 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV  195 (263)
T ss_dssp             HHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHH
Confidence            44444  99999999999999999999999999876544 2223345688999999999999999999999999999999


Q ss_pred             HcCCCC---cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          163 MKGKHP---RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       163 ltg~~p---~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|+..|   .....+.........   ..........++..+...|++
T Consensus       196 ~t~~~~~~~~~~~~~~~~~i~~~~---~~~~p~~~~~~l~~li~~cl~  240 (263)
T d1sm2a_         196 FSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQIMNHCWK  240 (263)
T ss_dssp             HTTSCCTTCSCCHHHHHHHHHHTC---CCCCCTTSCHHHHHHHHHHTC
T ss_pred             HHCCCCCCCCCCHHHHHHHHHhcC---CCCCccccCHHHHHHHHHHcc
Confidence            996544   222222322222111   111223334577888888876

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=7.1e-30  Score=206.68  Aligned_cols=121  Identities=14%  Similarity=0.083  Sum_probs=88.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC-CCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS-SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+|||.+  +||||||+|||++.++.+||+|||+++...... .......|++.|+|||.+....++.++|||||||++|
T Consensus       128 L~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~  207 (287)
T d1opja_         128 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW  207 (287)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred             HHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHH
Confidence            3455544  999999999999999999999999998765442 2223446788999999999999999999999999999


Q ss_pred             HHHcCCCC---cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHP---RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p---~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|..|   ..+..+.... +..+  ...-..+.+...+.++...|++
T Consensus       208 ell~~~~p~~~~~~~~~~~~~-i~~~--~~~~~~~~~~~~l~~li~~cl~  254 (287)
T d1opja_         208 EIATYGMSPYPGIDLSQVYEL-LEKD--YRMERPEGCPEKVYELMRACWQ  254 (287)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHH-HHTT--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             HHHhCCCCCCCcchHHHHHHH-HhcC--CCCCCCccchHHHHHHHHHHcC
Confidence            99997766   2233332222 2121  2222344566678888888876

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.5e-28  Score=201.41  Aligned_cols=82  Identities=32%  Similarity=0.353  Sum_probs=72.7

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|+|.+  +||||||+|||++.++.+||+|||+++.....   .....||+.|+|||.+....++.++||||+||++||
T Consensus       117 l~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilye  193 (316)
T d1fota_         117 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE  193 (316)
T ss_dssp             HHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHH
T ss_pred             hhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc---cccccCcccccCHHHHcCCCCCchhhccccchhHHH
Confidence            3455555  99999999999999999999999999887543   234679999999999988889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |+||+.|
T Consensus       194 mltG~~P  200 (316)
T d1fota_         194 MLAGYTP  200 (316)
T ss_dssp             HHHSSCT
T ss_pred             HHhCCCC
Confidence            9999999

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=4e-29  Score=203.32  Aligned_cols=114  Identities=10%  Similarity=0.030  Sum_probs=84.9

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCC--CCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD--SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH-  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~-  167 (208)
                      +||||||+|||+|.++.+||+|||+++.....  ........+++.|+|||.+....++.++|||||||++|||++|.. 
T Consensus       162 vHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~  241 (301)
T d1lufa_         162 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  241 (301)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCC
Confidence            99999999999999999999999999866443  222334568899999999999999999999999999999999865 


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |  ...-.+...... ++. . ..++..+..++..+...|++
T Consensus       242 p~~~~~~~e~~~~v~-~~~-~-~~~p~~~~~~~~~li~~cl~  280 (301)
T d1lufa_         242 PYYGMAHEEVIYYVR-DGN-I-LACPENCPLELYNLMRLCWS  280 (301)
T ss_dssp             TTTTSCHHHHHHHHH-TTC-C-CCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHH-cCC-C-CCCCccchHHHHHHHHHHcC
Confidence            4  222333333322 222 2 22355666788889999986

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-29  Score=205.68  Aligned_cols=111  Identities=17%  Similarity=0.189  Sum_probs=85.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~  167 (208)
                      +||||||+||+++.++.+||+|||+++.......  ......||+.|+|||.+....++.++|||||||++|||+| |+.
T Consensus       186 iHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~  265 (325)
T d1rjba_         186 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN  265 (325)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             eeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCC
Confidence            9999999999999999999999999987665422  2234567999999999999999999999999999999998 888


Q ss_pred             Cc------ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 PR------HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p~------~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |.      ..+...+....+      .-..+.+...+..+..+|++
T Consensus       266 Pf~~~~~~~~~~~~~~~~~~------~~~p~~~~~~l~~li~~cl~  305 (325)
T d1rjba_         266 PYPGIPVDANFYKLIQNGFK------MDQPFYATEEIYIIMQSCWA  305 (325)
T ss_dssp             SSTTCCCSHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHhcCCC------CCCCCcCCHHHHHHHHHHcC
Confidence            82      123333332211      12234555678888888876

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.7e-29  Score=203.05  Aligned_cols=118  Identities=20%  Similarity=0.268  Sum_probs=85.9

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .+|||.+  +||||||+|||++.++.+||+|||+++.......  ......||+.|+|||.+..+.++.++|||||||++
T Consensus       124 l~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil  203 (317)
T d1xkka_         124 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV  203 (317)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHH
Confidence            3455555  9999999999999999999999999987654422  22344689999999999999999999999999999


Q ss_pred             HHHHc-CCCC-----cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMK-GKHP-----RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~ellt-g~~p-----~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |||+| |+.|     ...+...+....+.      ..++.+...+..+..+|++
T Consensus       204 ~el~t~g~~p~~~~~~~~~~~~i~~~~~~------~~p~~~~~~~~~li~~cl~  251 (317)
T d1xkka_         204 WELMTFGSKPYDGIPASEISSILEKGERL------PQPPICTIDVYMIMVKCWM  251 (317)
T ss_dssp             HHHHTTSCCTTTTSCGGGHHHHHHHTCCC------CCCTTBCHHHHHHHHHHTC
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCCC------CCCcccCHHHHHHHHHhCC
Confidence            99999 6777     22344434332211      1234455677788888875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=2.1e-28  Score=203.05  Aligned_cols=82  Identities=27%  Similarity=0.237  Sum_probs=72.9

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|||..  +||||||+|||++.++.+||+|||+++.....   .....||+.|+|||.+....++.++||||+||++||
T Consensus       154 L~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilye  230 (350)
T d1rdqe_         154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE  230 (350)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc---cccccCccccCCHHHHcCCCCCccccccchhHHHHH
Confidence            4456655  99999999999999999999999999987543   234679999999999998889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |+||+.|
T Consensus       231 mltG~~P  237 (350)
T d1rdqe_         231 MAAGYPP  237 (350)
T ss_dssp             HHHSSCS
T ss_pred             HHhCCCC
Confidence            9999999

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=2e-28  Score=200.09  Aligned_cols=119  Identities=19%  Similarity=0.154  Sum_probs=87.7

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc---CCcCcccchHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT---LKVAKKCGMHSSGL  157 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~S~Gv  157 (208)
                      ..+|||.+  +||||||+|||++.++.+||+|||+++.....    ....||+.|+|||.+..   ..++.++|||||||
T Consensus       127 aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGv  202 (309)
T d1u5ra_         127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI  202 (309)
T ss_dssp             HHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHH
T ss_pred             HHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCC----CccccCccccCHHHHhccCCCCcCchhhhhhHHH
Confidence            34456655  99999999999999999999999999865432    34579999999998853   46889999999999


Q ss_pred             HHHHHHcCCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          158 LALEVMKGKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       158 vl~elltg~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ++|||++|+.|.  ..-.+.........  .....+..+.+.+..+...|++
T Consensus       203 ilyel~~g~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~li~~~L~  252 (309)
T d1u5ra_         203 TCIELAERKPPLFNMNAMSALYHIAQNE--SPALQSGHWSEYFRNFVDSCLQ  252 (309)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSC--CCCCSCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHHCc
Confidence            999999999992  22223233332222  2333445566677777777765

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-29  Score=202.57  Aligned_cols=84  Identities=21%  Similarity=0.260  Sum_probs=69.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc-----cCCcCcccchHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY-----TLKVAKKCGMHSSGL  157 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~S~Gv  157 (208)
                      +|||++  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+.     ...++.++||||+||
T Consensus       124 ~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGv  203 (288)
T d2jfla1         124 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI  203 (288)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHH
T ss_pred             HHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHH
Confidence            445544  9999999999999999999999999987654322223467899999999874     455789999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      ++|||+||+.|
T Consensus       204 ilyemltg~~P  214 (288)
T d2jfla1         204 TLIEMAEIEPP  214 (288)
T ss_dssp             HHHHHHHSSCT
T ss_pred             HHHHHhhCCCC
Confidence            99999999999

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-28  Score=198.70  Aligned_cols=121  Identities=13%  Similarity=0.107  Sum_probs=85.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      ..|||..  +||||||+|||+|.++.+||+|||+++..... ........||+.|+|||++....++.++||||||+++|
T Consensus       126 l~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~  205 (285)
T d1fmka3         126 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT  205 (285)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHH
Confidence            3455554  99999999999999999999999999876544 22333456899999999999999999999999999999


Q ss_pred             HHHcCCCC---cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHP---RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p---~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|..|   .....+........   ...-+++.+.+++.++...|++
T Consensus       206 el~t~~~p~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~l~~li~~cl~  252 (285)
T d1fmka3         206 ELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQCWR  252 (285)
T ss_dssp             HHHTTTCCSSTTCCHHHHHHHHHTT---CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHhc---CCCCCCcccCHHHHHHHHHHcc
Confidence            99997666   22333333332222   1122466777788899999986

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.5e-28  Score=193.19  Aligned_cols=121  Identities=15%  Similarity=0.154  Sum_probs=89.0

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+|||..  +||||||+||+++.++.+||+|||+++..... ........+|+.|+|||.+....++.++||||||+++|
T Consensus       113 l~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~  192 (258)
T d1k2pa_         113 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMW  192 (258)
T ss_dssp             HHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhH
Confidence            3455555  99999999999999999999999999876544 22333456889999999999899999999999999999


Q ss_pred             HHHc-CCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||+| |+.|  .....+... .+..+  ...........++..+...|++
T Consensus       193 el~t~g~~Pf~~~~~~~~~~-~i~~~--~~~~~p~~~~~~l~~li~~cl~  239 (258)
T d1k2pa_         193 EIYSLGKMPYERFTNSETAE-HIAQG--LRLYRPHLASEKVYTIMYSCWH  239 (258)
T ss_dssp             HHHTTSCCTTTTSCHHHHHH-HHHTT--CCCCCCTTCCHHHHHHHHHTTC
T ss_pred             hHHhcCCCCCCCCCHHHHHH-HHHhC--CCCCCcccccHHHHHHHHHHcc
Confidence            9998 7888  222222222 22222  1122233444577788888886

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.94  E-value=5.4e-28  Score=201.57  Aligned_cols=117  Identities=21%  Similarity=0.224  Sum_probs=85.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +|||..  +||||||+|||++.++.+||+|||+++......  .....||+.|+|||.+.. ..++.++||||+||++||
T Consensus       121 ~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~--~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilye  198 (364)
T d1omwa3         121 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK  198 (364)
T ss_dssp             HHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCc--ccccccccccchhHHhhcCCCCCcccchhHHHHHHHH
Confidence            344444  999999999999999999999999998766442  234579999999999874 468999999999999999


Q ss_pred             HHcCCCCc-----ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMKGKHPR-----HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 lltg~~p~-----~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+||+.|.     .......+......    ..+.+.+...+..+-..|++
T Consensus       199 mltG~~Pf~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~li~~~L~  245 (364)
T d1omwa3         199 LLRGHSPFRQHKTKDKHEIDRMTLTMA----VELPDSFSPELRSLLEGLLQ  245 (364)
T ss_dssp             HHHSSCSSCSSCSSCHHHHHHHSSSCC----CCCCSSSCHHHHHHHHHHTC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcccCC----CCCCCCCCHHHHHHHHHHcc
Confidence            99999992     22333333322221    12233455566666666654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.6e-28  Score=198.24  Aligned_cols=120  Identities=22%  Similarity=0.223  Sum_probs=88.9

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|||++  +||||||+|||++.++.+|++|||+++.............||+.|+|||.+....++.++||||+||++||
T Consensus       116 l~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye  195 (320)
T d1xjda_         116 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE  195 (320)
T ss_dssp             HHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHH
Confidence            3455544  99999999999999999999999999876655444455689999999999999999999999999999999


Q ss_pred             HHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 lltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+||+.|  +.+..+.........  .  .+.+.+..++..+-..|++
T Consensus       196 mltG~~PF~~~~~~~~~~~i~~~~--~--~~p~~~s~~~~dli~~~L~  239 (320)
T d1xjda_         196 MLIGQSPFHGQDEEELFHSIRMDN--P--FYPRWLEKEAKDLLVKLFV  239 (320)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC--C--CCCTTSCHHHHHHHHHHSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCC--C--CCCccCCHHHHHHHHHhcc
Confidence            9999999  223323222222111  1  2233455566666666654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.2e-29  Score=204.56  Aligned_cols=84  Identities=21%  Similarity=0.267  Sum_probs=71.6

Q ss_pred             hHHHhhh-h--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           83 LEKLLRQ-E--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        83 L~~~Lh~-~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      ..+|||+ +  +||||||+|||++.++.+||+|||+++......  .....||+.|+|||.+.+..++.++||||+||++
T Consensus       116 aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil  193 (322)
T d1s9ja_         116 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL  193 (322)
T ss_dssp             HHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT--C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc--cccccCCccccCchHHcCCCCCcHHHHHHHHHHH
Confidence            3456764 2  999999999999999999999999998664332  2345799999999999999999999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       194 ~ell~G~~P  202 (322)
T d1s9ja_         194 VEMAVGRYP  202 (322)
T ss_dssp             HHHHHSSCC
T ss_pred             HHHHHCCCC
Confidence            999999999

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.1e-28  Score=195.51  Aligned_cols=119  Identities=18%  Similarity=0.189  Sum_probs=88.2

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC---CCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS---SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      |||++  +||||||+||+++.++.+||+|||+++......   .......||+.|+|||.+....++.++|||||||++|
T Consensus       124 ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~  203 (285)
T d1u59a_         124 YLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW  203 (285)
T ss_dssp             HHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             HHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHH
Confidence            44444  999999999999999999999999999876442   1223446789999999999889999999999999999


Q ss_pred             HHHc-CCCCc--ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMK-GKHPR--HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 ellt-g~~p~--~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |++| |+.|.  ....+.... +..+.  ...+.+.+..++..+...|++
T Consensus       204 E~lt~G~~Pf~~~~~~~~~~~-i~~~~--~~~~p~~~~~~l~~li~~cl~  250 (285)
T d1u59a_         204 EALSYGQKPYKKMKGPEVMAF-IEQGK--RMECPPECPPELYALMSDCWI  250 (285)
T ss_dssp             HHHTTSCCTTTTCCTHHHHHH-HHTTC--CCCCCTTCCHHHHHHHHHTTC
T ss_pred             HHHhCCCCCCCCCCHHHHHHH-HHcCC--CCCCCCcCCHHHHHHHHHHcC
Confidence            9998 89982  122222222 22221  122345666788888888876

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=2.5e-28  Score=199.28  Aligned_cols=122  Identities=18%  Similarity=0.110  Sum_probs=76.8

Q ss_pred             HHhhhh--hhcCcCCCceeeC---CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLD---LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld---~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      +|||+.  +||||||+||++.   +++.+||+|||+++...... ......||+.|+|||.+....++.++||||+||++
T Consensus       121 ~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvil  199 (307)
T d1a06a_         121 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS-VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA  199 (307)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------------CTTSCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred             HhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCC-eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHH
Confidence            455544  9999999999994   57899999999998765432 22345799999999999988899999999999999


Q ss_pred             HHHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |||++|+.|  .....+..............-..+.+...+..+...|++
T Consensus       200 yell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  249 (307)
T d1a06a_         200 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME  249 (307)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSC
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHcc
Confidence            999999999  222223222332222112233344566677777777765

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.8e-28  Score=192.69  Aligned_cols=119  Identities=16%  Similarity=0.155  Sum_probs=87.0

Q ss_pred             HHHhhhh----hhcCcCCCceeeC-CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           84 EKLLRQE----ISFTTSSKNGLLD-LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        84 ~~~Lh~~----iH~dlk~~nilld-~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      .+|||.+    +||||||+|||++ +++.+||+|||+++.....  ......||+.|+|||.+. ++++.++||||+||+
T Consensus       125 l~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~--~~~~~~GT~~Y~aPE~~~-~~~~~~~DIwSlGvi  201 (270)
T d1t4ha_         125 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMC  201 (270)
T ss_dssp             HHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHH
T ss_pred             HHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC--ccCCcccCccccCHHHhC-CCCCCcCchhhHHHH
Confidence            3466653    9999999999996 5789999999999764332  334567999999999876 468999999999999


Q ss_pred             HHHHHcCCCCc---ccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          159 ALEVMKGKHPR---HFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       159 l~elltg~~p~---~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|||++|+.|.   ....+..+... .+. ....++.....++..+...|++
T Consensus       202 lyel~~g~~Pf~~~~~~~~~~~~i~-~~~-~~~~~~~~~~~~~~~li~~~l~  251 (270)
T d1t4ha_         202 MLEMATSEYPYSECQNAAQIYRRVT-SGV-KPASFDKVAIPEVKEIIEGCIR  251 (270)
T ss_dssp             HHHHHHSSCTTTTCSSHHHHHHHHT-TTC-CCGGGGGCCCHHHHHHHHHHSC
T ss_pred             HHHHHHCCCCCCCcccHHHHHHHHH-cCC-CCcccCccCCHHHHHHHHHHcc
Confidence            99999999992   22333333332 222 2333455555677778888875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.8e-28  Score=193.40  Aligned_cols=117  Identities=13%  Similarity=0.195  Sum_probs=78.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      +|+|..  +||||||+||+++.++.+|++|||+++..... ........||+.|+|||.+....++.++|||||||++||
T Consensus       122 ~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e  201 (273)
T d1mp8a_         122 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE  201 (273)
T ss_dssp             HHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             hhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHH
Confidence            345554  99999999999999999999999999876543 222334567899999999998999999999999999999


Q ss_pred             HHc-CCCC-----cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMK-GKHP-----RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 llt-g~~p-----~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+| |+.|     ...+...+..    +  ...-+++.+..++..+...|++
T Consensus       202 ~lt~g~~P~~~~~~~~~~~~i~~----~--~~~~~~~~~~~~~~~li~~cl~  247 (273)
T d1mp8a_         202 ILMHGVKPFQGVKNNDVIGRIEN----G--ERLPMPPNCPPTLYSLMTKCWA  247 (273)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHT----T--CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHc----C--CCCCCCCCCCHHHHHHHHHHcC
Confidence            998 7888     2233333322    2  1122456677788888888875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=8.8e-28  Score=193.07  Aligned_cols=124  Identities=17%  Similarity=0.192  Sum_probs=86.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC---CCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      .+|||..  +||||||+|||++.++..+++|||.++.....   ........||+.|+|||.+....++.++||||+||+
T Consensus       124 l~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  203 (277)
T d1o6ya_         124 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV  203 (277)
T ss_dssp             HHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHH
Confidence            3455554  99999999999999999999999998765433   223345679999999999998889999999999999


Q ss_pred             HHHHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          159 ALEVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       159 l~elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|||+||+.|  ...-.+.....+...........+.+...+..+-.+|++
T Consensus       204 lyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~  254 (277)
T d1o6ya_         204 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA  254 (277)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTC
T ss_pred             HHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHcc
Confidence            9999999999  233333444444333223344566677777788778775

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.9e-28  Score=193.31  Aligned_cols=120  Identities=19%  Similarity=0.156  Sum_probs=86.4

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      +|||++  +||||||+|||++.++.+|++|||+++.......   ......||+.|+|||.+....++.++|||||||++
T Consensus       121 ~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l  200 (277)
T d1xbba_         121 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM  200 (277)
T ss_dssp             HHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             hhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhh
Confidence            344444  9999999999999999999999999987654421   22345688999999999989999999999999999


Q ss_pred             HHHHc-CCCCcc--cHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMK-GKHPRH--FIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~ellt-g~~p~~--~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |||+| |+.|..  ...+...... .+.  ....++.+..++.++..+|++
T Consensus       201 ~ellt~g~~Pf~~~~~~~~~~~i~-~~~--~~~~p~~~~~~~~~li~~cl~  248 (277)
T d1xbba_         201 WEAFSYGQKPYRGMKGSEVTAMLE-KGE--RMGCPAGCPREMYDLMNLCWT  248 (277)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHH-TTC--CCCCCTTCCHHHHHHHHHHTC
T ss_pred             hHHhhCCCCCCCCCCHHHHHHHHH-cCC--CCCCCcccCHHHHHHHHHHcC
Confidence            99998 899822  2222222222 221  112345566677888888875

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.94  E-value=2.6e-27  Score=196.59  Aligned_cols=123  Identities=17%  Similarity=0.141  Sum_probs=90.7

Q ss_pred             HHHhhhh--hhcCcCCCceeeC--CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLD--LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld--~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .+|||..  +||||||+|||++  .++.+||+|||+++...... ......||+.|+|||.+....++.++||||+||++
T Consensus       140 L~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  218 (352)
T d1koba_         140 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG  218 (352)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCC-ceeeccCcccccCHHHHcCCCCCCccchHHHHHHH
Confidence            3455554  9999999999998  57899999999999876542 23445789999999999988999999999999999


Q ss_pred             HHHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |||+||+.|  +....+.................+.+...+..+...|++
T Consensus       219 yelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  268 (352)
T d1koba_         219 YVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQ  268 (352)
T ss_dssp             HHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSC
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcc
Confidence            999999999  222333333322222113333445566677777777765

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.9e-28  Score=193.22  Aligned_cols=122  Identities=15%  Similarity=0.092  Sum_probs=88.5

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC---CccccccccccccccccccCCcCcccchHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS---NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      .+|||.+  +||||||+||+++.++.+||+|||+++.......   ......++..|+|||.+....++.++||||||++
T Consensus       124 l~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvi  203 (273)
T d1u46a_         124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT  203 (273)
T ss_dssp             HHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             HHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHH
Confidence            3455555  9999999999999999999999999998755422   2233457789999999999999999999999999


Q ss_pred             HHHHHc-CCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          159 ALEVMK-GKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       159 l~ellt-g~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|||+| |+.|  ..+..+........+.  ..-..+.+...+.++...|++
T Consensus       204 l~emlt~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~l~~li~~cl~  253 (273)
T d1u46a_         204 LWEMFTYGQEPWIGLNGSQILHKIDKEGE--RLPRPEDCPQDIYNVMVQCWA  253 (273)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTSCC--CCCCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHhCCCCCCCCcCHHHHHHHHHhCCC--CCCCcccccHHHHHHHHHHcC
Confidence            999998 8988  3333333344333332  122234566678888888876

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.93  E-value=1.8e-27  Score=197.38  Aligned_cols=122  Identities=14%  Similarity=0.113  Sum_probs=87.1

Q ss_pred             HHhhhh--hhcCcCCCceeeC--CCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLD--LEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld--~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~  160 (208)
                      +|||..  +||||||+|||++  .++.+||+|||+++...... ......||+.|+|||.+....++.++||||+||++|
T Consensus       138 ~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~-~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvily  216 (350)
T d1koaa2         138 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY  216 (350)
T ss_dssp             HHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS-CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHH
T ss_pred             HHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccccc-ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHH
Confidence            344444  9999999999995  46889999999998876442 233467899999999999888999999999999999


Q ss_pred             HHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||++|+.|  ..+..+................-+.+.+.+..+...|++
T Consensus       217 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  265 (350)
T d1koaa2         217 ILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLL  265 (350)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcc
Confidence            99999999  223333333332222112222334455566666666654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-27  Score=192.00  Aligned_cols=78  Identities=21%  Similarity=0.155  Sum_probs=64.7

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----CCccccccccccccccccccC------CcCcccchHHHHHHHH
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYTL------KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~  160 (208)
                      +||||||+|||++.++.+||+|||+++......    .......||+.|+|||++...      .++.++|||||||++|
T Consensus       130 vHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~  209 (303)
T d1vjya_         130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  209 (303)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred             eccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHH
Confidence            899999999999999999999999999876542    123356799999999987643      3578999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+||..|
T Consensus       210 el~tg~~~  217 (303)
T d1vjya_         210 EIARRCSI  217 (303)
T ss_dssp             HHHHTBCB
T ss_pred             HHhhCCCC
Confidence            99999876

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.3e-27  Score=188.55  Aligned_cols=122  Identities=16%  Similarity=0.141  Sum_probs=87.5

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCC----cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEY----EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL  158 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~----~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvv  158 (208)
                      +|||+.  +||||||+||+++.++    .+|++|||+++...... ......+|+.|+|||.+....++.++||||+||+
T Consensus       127 ~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~-~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvi  205 (293)
T d1jksa_         127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI  205 (293)
T ss_dssp             HHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC-BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             HhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCc-cccccCCCCcccCHHHHcCCCCCCcccchhhhHH
Confidence            344444  9999999999998776    49999999998875442 2234578999999999998889999999999999


Q ss_pred             HHHHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          159 ALEVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       159 l~elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      +|||++|+.|  ..+-.+.................+.+...+..+-..|++
T Consensus       206 lyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  256 (293)
T d1jksa_         206 TYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV  256 (293)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSC
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHcc
Confidence            9999999999  223333333322222113333345555666667667764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.1e-27  Score=190.92  Aligned_cols=119  Identities=21%  Similarity=0.233  Sum_probs=86.5

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC----CCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS----SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      |+|..  +||||||+|||+|+++.+||+|||+++......    .......||+.|+|||.+....++.++||||||+++
T Consensus       145 ~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl  224 (311)
T d1r0pa_         145 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL  224 (311)
T ss_dssp             HHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             hhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHH
Confidence            44444  999999999999999999999999998765441    122345688999999999999999999999999999


Q ss_pred             HHHHcCCCC---cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMKGKHP---RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~elltg~~p---~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |||+||+.|   .....++........+ .  ...+.+..++.++..+|++
T Consensus       225 ~El~t~~~p~~~~~~~~~~~~~i~~g~~-~--~~p~~~~~~l~~li~~cl~  272 (311)
T d1r0pa_         225 WELMTRGAPPYPDVNTFDITVYLLQGRR-L--LQPEYCPDPLYEVMLKCWH  272 (311)
T ss_dssp             HHHHTTSCCSCC------CHHHHHTTCC-C--CCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCC-C--CCcccCcHHHHHHHHHHcC
Confidence            999997777   2222223333222221 1  1234455688889999976

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.5e-27  Score=190.79  Aligned_cols=115  Identities=10%  Similarity=0.007  Sum_probs=87.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCC--CccccccccccccccccccCCcCcccchHHHHHHHHHHHcCC-C
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGK-H  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~-~  167 (208)
                      +||||||+|||+|.++.+||+|||+++.......  ......+++.|+|||.+....++.++||||||+++|||+||. .
T Consensus       155 vHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~  234 (308)
T d1p4oa_         155 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ  234 (308)
T ss_dssp             BCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             eeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCC
Confidence            9999999999999999999999999987654321  223346889999999999999999999999999999999986 4


Q ss_pred             C--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccCC
Q 039937          168 P--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQS  208 (208)
Q Consensus       168 p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q~  208 (208)
                      |  .....++........  ..+ +.+.+...+.++..+|++.
T Consensus       235 p~~~~~~~~~~~~i~~~~--~~~-~p~~~~~~l~~li~~cl~~  274 (308)
T d1p4oa_         235 PYQGLSNEQVLRFVMEGG--LLD-KPDNCPDMLFELMRMCWQY  274 (308)
T ss_dssp             TTTTSCHHHHHHHHHTTC--CCC-CCTTCCHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHHHHHHhCC--CCC-CcccchHHHHHHHHHHcCC
Confidence            4  344445554443322  222 2345667888899999863

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.4e-27  Score=190.07  Aligned_cols=119  Identities=16%  Similarity=0.135  Sum_probs=89.1

Q ss_pred             Hhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           86 LLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        86 ~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      |||+.  +||||||+|||++.++.+||+|||+++......  .......+++.|+|||.+..+.++.++||||||+++||
T Consensus       150 ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~e  229 (299)
T d1fgka_         150 YLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE  229 (299)
T ss_dssp             HHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHH
Confidence            44444  999999999999999999999999998776542  22344568899999999999999999999999999999


Q ss_pred             HHc-CCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          162 VMK-GKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       162 llt-g~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |++ |+.|  .....+ +...+..+  ..-..++.+...+.++..+|++
T Consensus       230 ll~~g~~p~~~~~~~~-~~~~i~~~--~~~~~p~~~~~~l~~li~~cl~  275 (299)
T d1fgka_         230 IFTLGGSPYPGVPVEE-LFKLLKEG--HRMDKPSNCTNELYMMMRDCWH  275 (299)
T ss_dssp             HHTTSCCSSTTCCHHH-HHHHHHTT--CCCCCCSSCCHHHHHHHHHHTC
T ss_pred             hccCCCCCCCCCCHHH-HHHHHHcC--CCCCCCccchHHHHHHHHHHcc
Confidence            998 6766  222222 22222232  2222355666788889999986

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-26  Score=185.90  Aligned_cols=113  Identities=19%  Similarity=0.227  Sum_probs=81.7

Q ss_pred             HHhhhh--hhcCcCCCceeeCC-CCcEEEcccceeeeecCCCCCccccccccccccccccccCCc-CcccchHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDL-EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKV-AKKCGMHSSGLLAL  160 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~-~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~  160 (208)
                      +|||+.  +||||||+|||++. ++.+|++|||+++.....  ......||+.|+|||.+....+ +.++||||+||++|
T Consensus       124 ~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~--~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvily  201 (273)
T d1xwsa_         124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY  201 (273)
T ss_dssp             HHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCccccCcccceEEecCCCeEEECccccceecccc--cccccccCCCcCCHHHHcCCCCCCcccccccceeeeh
Confidence            455544  99999999999985 579999999999876533  2345679999999999876655 57789999999999


Q ss_pred             HHHcCCCCcccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          161 EVMKGKHPRHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       161 elltg~~p~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      ||+||+.|...-.+..+..        -.+.+.+..++.++..+|++
T Consensus       202 ell~g~~Pf~~~~~i~~~~--------~~~~~~~s~~~~~li~~~L~  240 (273)
T d1xwsa_         202 DMVCGDIPFEHDEEIIRGQ--------VFFRQRVSSECQHLIRWCLA  240 (273)
T ss_dssp             HHHHSSCSCCSHHHHHHCC--------CCCSSCCCHHHHHHHHHHTC
T ss_pred             hHhhCCCCCCCchHHhhcc--------cCCCCCCCHHHHHHHHHHcc
Confidence            9999999943332222111        11234455566666666654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-26  Score=188.74  Aligned_cols=83  Identities=20%  Similarity=0.255  Sum_probs=71.9

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV  162 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el  162 (208)
                      +|||.+  +||||||+|||++.++.+|++|||+++...... ......||+.|+|||.+....++.++||||+||+++||
T Consensus       130 ~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~-~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~el  208 (305)
T d1blxa_         130 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM  208 (305)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccc-cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHH
Confidence            455554  999999999999999999999999987654332 23456789999999999999999999999999999999


Q ss_pred             HcCCCC
Q 039937          163 MKGKHP  168 (208)
Q Consensus       163 ltg~~p  168 (208)
                      ++|+.|
T Consensus       209 l~g~~p  214 (305)
T d1blxa_         209 FRRKPL  214 (305)
T ss_dssp             HHSSCS
T ss_pred             HHCCCC
Confidence            999999

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.3e-26  Score=186.53  Aligned_cols=85  Identities=25%  Similarity=0.181  Sum_probs=72.1

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~  160 (208)
                      .+|||.+  +||||||+|||++.++.+||+|||+++.............||+.|+|||.+... .++.++||||+||+++
T Consensus       113 L~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~  192 (299)
T d1ua2a_         113 LEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA  192 (299)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred             HHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHH
Confidence            3456655  999999999999999999999999998766543344456789999999988644 5789999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||+||+.|
T Consensus       193 el~~g~~p  200 (299)
T d1ua2a_         193 ELLLRVPF  200 (299)
T ss_dssp             HHHHSSCS
T ss_pred             HHHhCcCC
Confidence            99999988

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.92  E-value=6.5e-26  Score=182.33  Aligned_cols=116  Identities=16%  Similarity=0.138  Sum_probs=84.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccc------cCCcCcccchHHHHHHHHHHHc
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTY------TLKVAKKCGMHSSGLLALEVMK  164 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~S~Gvvl~ellt  164 (208)
                      +||||||+||+++.++.+||+|||+++....... .....||..|+|||.+.      ...++.++||||+||+++||++
T Consensus       132 vHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~  210 (277)
T d1phka_         132 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA  210 (277)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH
T ss_pred             cccccccceEEEcCCCCeEEccchheeEccCCCc-eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhcc
Confidence            9999999999999999999999999998765432 34467899999999875      2346789999999999999999


Q ss_pred             CCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          165 GKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       165 g~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |+.|  .......................+.+.+++..+..+|++
T Consensus       211 g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  255 (277)
T d1phka_         211 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV  255 (277)
T ss_dssp             SSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCC
T ss_pred             CCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcc
Confidence            9999  222222222222222112222233566678888888876

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.7e-26  Score=181.29  Aligned_cols=108  Identities=19%  Similarity=0.174  Sum_probs=78.8

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHc-CCCC-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMK-GKHP-  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p-  168 (208)
                      +||||||+||+++.++.+|++|||+++......   ....++..|+|||++....++.++||||||+++|||+| |+.| 
T Consensus       125 vH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~---~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~  201 (262)
T d1byga_         125 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  201 (262)
T ss_dssp             CCSCCSGGGEEECTTSCEEECCCCC---------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred             eccccchHhheecCCCCEeecccccceecCCCC---ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCC
Confidence            999999999999999999999999998765432   23456889999999998999999999999999999998 6766 


Q ss_pred             ----cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 ----RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 ----~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                          ...+..++...      ....+++.+..++.++..+|++
T Consensus       202 ~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~~li~~cl~  238 (262)
T d1byga_         202 PRIPLKDVVPRVEKG------YKMDAPDGCPPAVYEVMKNCWH  238 (262)
T ss_dssp             TTSCGGGHHHHHTTT------CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHcC------CCCCCCccCCHHHHHHHHHHcc
Confidence                23444444332      2222355666788888888876

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-26  Score=188.98  Aligned_cols=111  Identities=16%  Similarity=0.183  Sum_probs=84.6

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCC--CCccccccccccccccccccCCcCcccchHHHHHHHHHHHcC-CC
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDS--SNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKG-KH  167 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg-~~  167 (208)
                      +||||||+||+++.++.+|++|||+++......  .......||+.|+|||.+....++.++||||||+++|||+|+ ++
T Consensus       167 vHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p  246 (311)
T d1t46a_         167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS  246 (311)
T ss_dssp             CCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCC
Confidence            999999999999999999999999998765442  222345789999999999999999999999999999999995 44


Q ss_pred             C------cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          168 P------RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       168 p------~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |      ...+...+....      ....+..+...+..+..+|++
T Consensus       247 ~~~~~~~~~~~~~~i~~~~------~~~~~~~~~~~l~~Li~~cl~  286 (311)
T d1t46a_         247 PYPGMPVDSKFYKMIKEGF------RMLSPEHAPAEMYDIMKTCWD  286 (311)
T ss_dssp             SSTTCCSSHHHHHHHHHTC------CCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHhcCC------CCCCcccccHHHHHHHHHHcC
Confidence            4      112333343322      222344556678888888875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.92  E-value=3.8e-26  Score=184.93  Aligned_cols=85  Identities=16%  Similarity=0.339  Sum_probs=71.4

Q ss_pred             HHHhhhh--hhcCcCCCceeeCC-----CCcEEEcccceeeeecCCC-------CCccccccccccccccccccCCcCcc
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDL-----EYEARAFDFGIAKFFKLDS-------SNRTELAGTYGYIALELTYTLKVAKK  149 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~-----~~~~kl~dfgl~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~  149 (208)
                      .+++|..  +||||||+||+++.     .+.+|++|||+++......       .......||+.|+|||.+....++.+
T Consensus       114 l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~  193 (293)
T d1csna_         114 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRR  193 (293)
T ss_dssp             HHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH
T ss_pred             HHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChH
Confidence            3455554  99999999999974     5789999999999865431       12234679999999999998889999


Q ss_pred             cchHHHHHHHHHHHcCCCC
Q 039937          150 CGMHSSGLLALEVMKGKHP  168 (208)
Q Consensus       150 ~Dv~S~Gvvl~elltg~~p  168 (208)
                      +||||+|++++||+||+.|
T Consensus       194 ~DiwSlG~~l~elltg~~P  212 (293)
T d1csna_         194 DDLEALGHVFMYFLRGSLP  212 (293)
T ss_dssp             HHHHHHHHHHHHHHHSSCT
T ss_pred             HHHHHhhHHHHHHHhCCCc
Confidence            9999999999999999999

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.7e-26  Score=187.15  Aligned_cols=113  Identities=15%  Similarity=0.096  Sum_probs=82.5

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC-C-
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH-P-  168 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~-p-  168 (208)
                      +||||||+|||++.++.+||+|||+++....... .....||..|+|||.+....++.++||||||+++|||++|.. | 
T Consensus       149 iHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~  227 (309)
T d1fvra_         149 IHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY  227 (309)
T ss_dssp             ECSCCSGGGEEECGGGCEEECCTTCEESSCEECC-C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             cccccccceEEEcCCCceEEcccccccccccccc-ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCC
Confidence            9999999999999999999999999986543321 223468899999999999999999999999999999999765 4 


Q ss_pred             -cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          169 -RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       169 -~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                       ..+..+.........+   -.....+..++..+..+|++
T Consensus       228 ~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~~cl~  264 (309)
T d1fvra_         228 CGMTCAELYEKLPQGYR---LEKPLNCDDEVYDLMRQCWR  264 (309)
T ss_dssp             TTCCHHHHHHHGGGTCC---CCCCTTBCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHhcCC---CCCCccCCHHHHHHHHHHcC
Confidence             2333333333222211   12234556678888888876

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.7e-26  Score=186.12  Aligned_cols=86  Identities=20%  Similarity=0.179  Sum_probs=72.9

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCC-cCcccchHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK-VAKKCGMHSSGLLA  159 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl  159 (208)
                      ..+|||+.  +||||||+|||++.++.+|++|||+++.............||+.|+|||.+.... .+.++|+||+||++
T Consensus       114 ~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvil  193 (298)
T d1gz8a_         114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF  193 (298)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhh
Confidence            34566655  9999999999999999999999999987765544445567999999999876544 57899999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      |||++|+.|
T Consensus       194 y~m~~G~~P  202 (298)
T d1gz8a_         194 AEMVTRRAL  202 (298)
T ss_dssp             HHHHHSSCS
T ss_pred             hHHhhCCCC
Confidence            999999999

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5e-26  Score=187.61  Aligned_cols=77  Identities=27%  Similarity=0.228  Sum_probs=68.2

Q ss_pred             hhcCcCCCceeeCC---CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHHHHcCCC
Q 039937           91 ISFTTSSKNGLLDL---EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH  167 (208)
Q Consensus        91 iH~dlk~~nilld~---~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~  167 (208)
                      +||||||+|||++.   .+.+|++|||+++....... .....||+.|+|||.+....++.++||||+||++|||+||+.
T Consensus       133 iHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~  211 (335)
T d2ozaa1         133 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP  211 (335)
T ss_dssp             ECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCC-CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSC
T ss_pred             ccccccccccccccccccccccccccceeeeccCCCc-cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCC
Confidence            99999999999985   56799999999988765432 344679999999999998889999999999999999999999


Q ss_pred             C
Q 039937          168 P  168 (208)
Q Consensus       168 p  168 (208)
                      |
T Consensus       212 P  212 (335)
T d2ozaa1         212 P  212 (335)
T ss_dssp             S
T ss_pred             C
Confidence            9

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=5.8e-26  Score=184.06  Aligned_cols=85  Identities=19%  Similarity=0.295  Sum_probs=71.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeC---CCCcEEEcccceeeeecCCC-------CCccccccccccccccccccCCcCcccc
Q 039937           84 EKLLRQE--ISFTTSSKNGLLD---LEYEARAFDFGIAKFFKLDS-------SNRTELAGTYGYIALELTYTLKVAKKCG  151 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld---~~~~~kl~dfgl~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~D  151 (208)
                      .+|||.+  +||||||+||+++   .+..+|++|||+++......       .......||+.|+|||.+.+..++.++|
T Consensus       116 l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  195 (299)
T d1ckia_         116 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD  195 (299)
T ss_dssp             HHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHH
T ss_pred             HHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhh
Confidence            3566665  9999999999875   45679999999999876431       1223457999999999999888999999


Q ss_pred             hHHHHHHHHHHHcCCCC
Q 039937          152 MHSSGLLALEVMKGKHP  168 (208)
Q Consensus       152 v~S~Gvvl~elltg~~p  168 (208)
                      ||||||+++||+||+.|
T Consensus       196 iwSlG~~l~el~tg~~P  212 (299)
T d1ckia_         196 LESLGYVLMYFNLGSLP  212 (299)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             EEecCHHHHHHHhCCCc
Confidence            99999999999999999

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.2e-26  Score=185.30  Aligned_cols=123  Identities=19%  Similarity=0.113  Sum_probs=87.2

Q ss_pred             HHHhhhh--hhcCcCCCceeeCC--CCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDL--EYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~--~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl  159 (208)
                      .+|||+.  +||||||+|||++.  ...+|++|||+++...... ......+++.|+|||......++.++||||+||++
T Consensus       115 l~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~-~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvil  193 (321)
T d1tkia_         115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV  193 (321)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCC-cccccccccccccchhccCCCCCchhhcccHHHHH
Confidence            3455554  99999999999984  4589999999998765432 23345789999999999988899999999999999


Q ss_pred             HHHHcCCCC--cccHHHHHHhhcCCCCCCccccCCCCCchHHHHhccccC
Q 039937          160 LEVMKGKHP--RHFIFSICSSSSNFVIAPHEILDPRFQPHHTMFGVNCYQ  207 (208)
Q Consensus       160 ~elltg~~p--~~~l~~~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~C~q  207 (208)
                      |||++|+.|  .....+.................+.+..++..+...|++
T Consensus       194 y~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  243 (321)
T d1tkia_         194 YVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV  243 (321)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSC
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHcc
Confidence            999999999  223333333333222113333334555566666666654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.9e-25  Score=181.30  Aligned_cols=84  Identities=27%  Similarity=0.337  Sum_probs=69.0

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC-CCCccccccccccccccccccC--CcCcccchHHHHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD-SSNRTELAGTYGYIALELTYTL--KVAKKCGMHSSGLLA  159 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl  159 (208)
                      +|+|..  +||||||+||+++.++.+||+|||+++..... ........|++.|++||.+...  .++.++||||+||++
T Consensus       143 ~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iL  222 (322)
T d1vzoa_         143 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM  222 (322)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHH
T ss_pred             HHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHH
Confidence            344444  99999999999999999999999999876543 2233456789999999988644  467899999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       223 yelltG~~P  231 (322)
T d1vzoa_         223 YELLTGASP  231 (322)
T ss_dssp             HHHHHSSCT
T ss_pred             HHHHhCCCC
Confidence            999999999

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.91  E-value=1.1e-25  Score=181.24  Aligned_cols=86  Identities=21%  Similarity=0.199  Sum_probs=68.0

Q ss_pred             hHHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHH
Q 039937           83 LEKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLA  159 (208)
Q Consensus        83 L~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl  159 (208)
                      ..+|||+.  +||||||+|||++.++.+|++|||.+..............+++.|+|||.+.. ..++.++||||+||++
T Consensus       112 ~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l  191 (286)
T d1ob3a_         112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF  191 (286)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred             HHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHH
Confidence            34566655  99999999999999999999999999876554333344568899999998864 4568999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       192 ~el~~G~~p  200 (286)
T d1ob3a_         192 AEMVNGTPL  200 (286)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHHCCCC
Confidence            999999999

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.3e-25  Score=180.25  Aligned_cols=85  Identities=18%  Similarity=0.175  Sum_probs=70.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC----CCCccccccccccccccccccC-CcCcccchHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD----SSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSG  156 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~G  156 (208)
                      .+|||+.  +||||||+|||++.++.+|++|||+++.....    ........||+.|+|||.+... .++.++||||+|
T Consensus       130 l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlG  209 (318)
T d3blha1         130 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG  209 (318)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             HHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCC
Confidence            3455554  99999999999999999999999999876543    1222345689999999988754 678999999999


Q ss_pred             HHHHHHHcCCCC
Q 039937          157 LLALEVMKGKHP  168 (208)
Q Consensus       157 vvl~elltg~~p  168 (208)
                      |+++||++|+.|
T Consensus       210 vil~el~~g~~p  221 (318)
T d3blha1         210 CIMAEMWTRSPI  221 (318)
T ss_dssp             HHHHHHHHSSCS
T ss_pred             ceeeeHhhCCCC
Confidence            999999999998

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.6e-24  Score=173.23  Aligned_cols=85  Identities=18%  Similarity=0.226  Sum_probs=72.0

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCC-cCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLK-VAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~  160 (208)
                      .+|||.+  +||||||+|||++.++.+|++|||.++.............++..|+|||.+.... ++.++||||+||+++
T Consensus       114 L~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~  193 (292)
T d1unla_         114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA  193 (292)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred             HHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHH
Confidence            4566665  9999999999999999999999999998766544444456778899999887554 689999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       194 ell~g~~p  201 (292)
T d1unla_         194 ELANAGRP  201 (292)
T ss_dssp             HHTTTSCC
T ss_pred             HHhhCCCC
Confidence            99999998

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.9e-25  Score=180.88  Aligned_cols=85  Identities=22%  Similarity=0.265  Sum_probs=70.7

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCC---CCCccccccccccccccccc-cCCcCcccchHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD---SSNRTELAGTYGYIALELTY-TLKVAKKCGMHSSGL  157 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~---~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~S~Gv  157 (208)
                      .+|||.+  +||||||+|||++.++.+||+|||+++.....   ........|++.|+|||.+. ...++.++||||+||
T Consensus       122 l~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~  201 (345)
T d1pmea_         122 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC  201 (345)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHH
T ss_pred             HHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCc
Confidence            3455554  99999999999999999999999999876543   22234567899999999885 445688999999999


Q ss_pred             HHHHHHcCCCC
Q 039937          158 LALEVMKGKHP  168 (208)
Q Consensus       158 vl~elltg~~p  168 (208)
                      +++||++|+.|
T Consensus       202 il~eml~g~~p  212 (345)
T d1pmea_         202 ILAEMLSNRPI  212 (345)
T ss_dssp             HHHHHHHSSCS
T ss_pred             eehHHhhCCCC
Confidence            99999999999

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2e-24  Score=178.72  Aligned_cols=84  Identities=20%  Similarity=0.188  Sum_probs=69.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCC-cEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEY-EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~-~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl  159 (208)
                      .+|||++  +||||||+|||++.++ .+||+|||+++....... .....|+..|+|||.+.. ..++.++||||+||++
T Consensus       135 L~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il  213 (350)
T d1q5ka_         135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL  213 (350)
T ss_dssp             HHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcc-cccccccccccChHHhhcccCCCcceeecccceEE
Confidence            3455555  9999999999999775 899999999987755422 234578999999998764 5689999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +||++|+.|
T Consensus       214 ~el~~g~~p  222 (350)
T d1q5ka_         214 AELLLGQPI  222 (350)
T ss_dssp             HHHHHTSCS
T ss_pred             EehhhCCCC
Confidence            999999998

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.7e-24  Score=174.75  Aligned_cols=82  Identities=21%  Similarity=0.274  Sum_probs=70.3

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCcccccccccccccccccc-CCcCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYT-LKVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~  160 (208)
                      .+|||++  +||||||+|||++.++.+|++|||+++.....   .+...+|+.|+|||.+.. ...+.++||||+||+++
T Consensus       134 L~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~  210 (346)
T d1cm8a_         134 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA  210 (346)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHH
T ss_pred             HHHHHhCCCcccccCcchhhcccccccccccccceeccCCc---cccccccccccCHHHHcCCCCCCccchhhcchHHHH
Confidence            3456655  99999999999999999999999999876543   234578999999998875 45689999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       211 ell~g~~p  218 (346)
T d1cm8a_         211 EMITGKTL  218 (346)
T ss_dssp             HHHHSSCS
T ss_pred             HHHHCcCC
Confidence            99999999

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.87  E-value=2.5e-23  Score=170.41  Aligned_cols=84  Identities=18%  Similarity=0.216  Sum_probs=69.6

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCC-CcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLE-YEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLA  159 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~-~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl  159 (208)
                      .+|||++  +||||||+|||++.+ ..+|++|||+++....... .....+|+.|+|||.+... .++.++||||+||++
T Consensus       142 L~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l  220 (328)
T d3bqca1         142 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML  220 (328)
T ss_dssp             HHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred             HHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCc-ccccccCccccCcccccCCCCCCcccchhhhhhhh
Confidence            4566665  999999999999865 4689999999987765422 2345789999999987754 468999999999999


Q ss_pred             HHHHcCCCC
Q 039937          160 LEVMKGKHP  168 (208)
Q Consensus       160 ~elltg~~p  168 (208)
                      +|+++|+.|
T Consensus       221 ~e~~~g~~p  229 (328)
T d3bqca1         221 ASMIFRKEP  229 (328)
T ss_dssp             HHHHHTCSS
T ss_pred             HHhccCCCC
Confidence            999999998

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.2e-22  Score=168.29  Aligned_cols=84  Identities=20%  Similarity=0.169  Sum_probs=63.8

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALE  161 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e  161 (208)
                      .+|||..  +||||||+|||++.++..|++|||+++...... ......+|+.|+|||.+.+..++.++||||+||+++|
T Consensus       132 l~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~-~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~e  210 (355)
T d2b1pa1         132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  210 (355)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             HHHhhhcccccccCCccccccccccceeeechhhhhcccccc-ccccccccccccChhhhcCCCCCCCcccccccchHHH
Confidence            3455554  999999999999999999999999988665432 2234568999999999998889999999999999999


Q ss_pred             HHcCCCC
Q 039937          162 VMKGKHP  168 (208)
Q Consensus       162 lltg~~p  168 (208)
                      |++|+.|
T Consensus       211 ll~g~~p  217 (355)
T d2b1pa1         211 MVRHKIL  217 (355)
T ss_dssp             HHHSSCS
T ss_pred             HhhCCCC
Confidence            9999988

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.5e-23  Score=168.35  Aligned_cols=82  Identities=21%  Similarity=0.278  Sum_probs=65.0

Q ss_pred             HHHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccccccccC-CcCcccchHHHHHHHH
Q 039937           84 EKLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTL-KVAKKCGMHSSGLLAL  160 (208)
Q Consensus        84 ~~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~  160 (208)
                      .+|||++  +||||||+|||++.++.+|++|||++......   .....|++.|+|||..... ..+.++||||+||+++
T Consensus       134 L~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~---~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~  210 (348)
T d2gfsa1         134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  210 (348)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG---GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHH
T ss_pred             HHHHHhCCCcccccCCccccccccccccccccchhcccCcc---cccccccccccCchhhcCCccCCcccchhhhhHHHH
Confidence            3455555  99999999999999999999999998765432   2345688999999986654 4689999999999999


Q ss_pred             HHHcCCCC
Q 039937          161 EVMKGKHP  168 (208)
Q Consensus       161 elltg~~p  168 (208)
                      ||++|+.|
T Consensus       211 ~ll~g~~p  218 (348)
T d2gfsa1         211 ELLTGRTL  218 (348)
T ss_dssp             HHHHSSCS
T ss_pred             HHHhCCCC
Confidence            99999998

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=1.2e-21  Score=161.88  Aligned_cols=81  Identities=17%  Similarity=0.209  Sum_probs=68.1

Q ss_pred             HHhhh-h--hhcCcCCCceeeCCCC------cEEEcccceeeeecCCCCCccccccccccccccccccCCcCcccchHHH
Q 039937           85 KLLRQ-E--ISFTTSSKNGLLDLEY------EARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS  155 (208)
Q Consensus        85 ~~Lh~-~--iH~dlk~~nilld~~~------~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~S~  155 (208)
                      ++||+ .  +||||||+|||++.++      .++++|||.+.......   ....||+.|+|||.+....++.++|+||+
T Consensus       139 ~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  215 (362)
T d1q8ya_         139 DYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY---TNSIQTREYRSPEVLLGAPWGCGADIWST  215 (362)
T ss_dssp             HHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC---CSCCSCGGGCCHHHHHTCCCCTHHHHHHH
T ss_pred             HHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccccc---ccccccccccChhhccccCCCccccccch
Confidence            35554 2  9999999999998654      48999999988654332   34568999999999998889999999999


Q ss_pred             HHHHHHHHcCCCC
Q 039937          156 GLLALEVMKGKHP  168 (208)
Q Consensus       156 Gvvl~elltg~~p  168 (208)
                      ||+++||++|+.|
T Consensus       216 G~il~el~~g~~p  228 (362)
T d1q8ya_         216 ACLIFELITGDFL  228 (362)
T ss_dssp             HHHHHHHHHSSCC
T ss_pred             HHHHHHHHHCCCC
Confidence            9999999999998

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.26  E-value=9.9e-13  Score=98.65  Aligned_cols=65  Identities=11%  Similarity=-0.042  Sum_probs=42.2

Q ss_pred             HHhhhh--hhcCcCCCceeeCCCCcEEEcccceeeeecCCCCCccccccccccccc------cccccCCcCcccchHHHH
Q 039937           85 KLLRQE--ISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIAL------ELTYTLKVAKKCGMHSSG  156 (208)
Q Consensus        85 ~~Lh~~--iH~dlk~~nilld~~~~~kl~dfgl~~~~~~~~~~~~~~~g~~~y~aP------E~~~~~~~~~~~Dv~S~G  156 (208)
                      .+||..  +||||||+|||+++++ ++++|||.+........        ..|...      +. ...+++.++|+||..
T Consensus       117 ~~lH~~giiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~~~--------~~~l~rd~~~~~~~-f~r~y~~~~d~~s~~  186 (191)
T d1zara2         117 AKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGW--------REILERDVRNIITY-FSRTYRTEKDINSAI  186 (191)
T ss_dssp             HHHHHTTEECSCCSTTSEEEETTE-EEECCCTTCEETTSTTH--------HHHHHHHHHHHHHH-HHHHHCCCCCHHHHH
T ss_pred             HHHhhCCEEEccCChhheeeeCCC-EEEEECCCcccCCCCCc--------HHHHHHHHHHHHHH-HcCCCCCcccHHHHH
Confidence            344444  9999999999999654 88999999876543211        011111      11 235677889999965


Q ss_pred             HHH
Q 039937          157 LLA  159 (208)
Q Consensus       157 vvl  159 (208)
                      --+
T Consensus       187 ~~~  189 (191)
T d1zara2         187 DRI  189 (191)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433

>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Ngr ectodomain-like
domain: von Willebrand factor binding domain of glycoprotein Ib alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.03  Score=41.98  Aligned_cols=37  Identities=30%  Similarity=0.404  Sum_probs=19.6

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCCCCcC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGNKRLC   39 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~   39 (208)
                      ++|++|||++|+|+ .||.. ..+..+....+.||+..|
T Consensus       172 ~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C  209 (266)
T d1p9ag_         172 ENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC  209 (266)
T ss_dssp             TTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred             cccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence            45666666666666 55543 223334444555665555

>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Ngr ectodomain-like
domain: High affinity nerve growth factor receptor, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.86  E-value=0.1  Score=35.83  Aligned_cols=18  Identities=22%  Similarity=0.165  Sum_probs=9.7

Q ss_pred             CCCCEEecccCCCcccCC
Q 039937            2 HWLSRIDISYNALQGPIP   19 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip   19 (208)
                      ++|+.|+|++|+++.--|
T Consensus        56 ~~L~~L~Ls~N~l~~i~~   73 (156)
T d2ifga3          56 GELRNLTIVKSGLRFVAP   73 (156)
T ss_dssp             CCCSEEECCSSCCCEECT
T ss_pred             cccCcceeeccccCCccc
Confidence            455555555555555444

>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Ngr ectodomain-like
domain: Slit
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.79  E-value=0.09  Score=37.22  Aligned_cols=34  Identities=9%  Similarity=0.098  Sum_probs=17.9

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      ++|++|+||+|++++..|.. ..+..+....+.+|
T Consensus        78 ~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N  112 (192)
T d1w8aa_          78 SHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN  112 (192)
T ss_dssp             TTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSS
T ss_pred             cccceeeeccccccccCHHHHhCCCcccccccCCc
Confidence            45667777777776655542 22333444444444

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Polygalacturonase inhibiting protein PGIP
domain: Polygalacturonase inhibiting protein PGIP
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=90.63  E-value=0.035  Score=42.46  Aligned_cols=35  Identities=23%  Similarity=0.369  Sum_probs=22.6

Q ss_pred             CCCCCEEeccc-CCCcccCCCC-cccCcCCcccccCC
Q 039937            1 MHWLSRIDISY-NALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~-N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      |++|++|||+. |+|+|.||.. ..+.++....+.+|
T Consensus        75 L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N  111 (313)
T d1ogqa_          75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT  111 (313)
T ss_dssp             CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEE
T ss_pred             Cccccccccccccccccccccccccccccchhhhccc
Confidence            46788888875 7888888864 33445544444444

>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.52  E-value=0.16  Score=33.35  Aligned_cols=33  Identities=21%  Similarity=0.371  Sum_probs=18.7

Q ss_pred             CCCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            2 HWLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      ++|++||+|+|+++ .+|.. ..+.++......+|
T Consensus        20 ~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N   53 (124)
T d1dcea3          20 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDN   53 (124)
T ss_dssp             TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred             CCCCEEECCCCccC-cchhhhhhhhcccccccccc
Confidence            56777777777776 35542 33444444444444

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=85.47  E-value=0.13  Score=37.59  Aligned_cols=28  Identities=11%  Similarity=-0.071  Sum_probs=24.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.|.||+++++..+-+.||+.+..
T Consensus       178 iHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         178 THGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             ECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EeCCCCCcceEEeCCceEEEEEchhccc
Confidence            9999999999999877778999986644

>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: U2A'-like
domain: Splicesomal U2A' protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.23  E-value=0.27  Score=33.78  Aligned_cols=32  Identities=9%  Similarity=0.012  Sum_probs=18.0

Q ss_pred             CCCEEecccCCCcccCCCC-cccCcCCcccccCC
Q 039937            3 WLSRIDISYNALQGPIPDS-TTFRDAPMKALQGN   35 (208)
Q Consensus         3 ~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n   35 (208)
                      .|.+|||++|+++.- |.. ..+..+....+.+|
T Consensus        19 ~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N   51 (162)
T d1a9na_          19 RDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDN   51 (162)
T ss_dssp             SCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSS
T ss_pred             cCcEEECCCCCCCcc-CccccccccCCEEECCCC
Confidence            466777777777553 432 22444555555555

>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.19  E-value=0.24  Score=32.45  Aligned_cols=34  Identities=21%  Similarity=0.215  Sum_probs=22.8

Q ss_pred             CCCCCEEecccCCCcccCCCCcccCcCCcccccCC
Q 039937            1 MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGN   35 (208)
Q Consensus         1 ~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n   35 (208)
                      +++|++|++++|++++ +|....+.++......+|
T Consensus        42 l~~L~~L~l~~N~i~~-l~~~~~l~~L~~L~l~~N   75 (124)
T d1dcea3          42 LRCLEVLQASDNALEN-VDGVANLPRLQELLLCNN   75 (124)
T ss_dssp             CTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSS
T ss_pred             hhcccccccccccccc-cCccccccccCeEECCCC
Confidence            4688999999999985 455444555555555555

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.92  E-value=0.17  Score=37.12  Aligned_cols=28  Identities=11%  Similarity=-0.071  Sum_probs=24.1

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      +|+|+.+.||+++++...-+.||+.+..
T Consensus       186 ~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         186 SHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             ECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEeeccCcceeecCCceEEEeechhccc
Confidence            8999999999999877777999986654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=82.60  E-value=0.2  Score=38.02  Aligned_cols=28  Identities=18%  Similarity=-0.039  Sum_probs=25.2

Q ss_pred             hhcCcCCCceeeCCCCcEEEcccceeee
Q 039937           91 ISFTTSSKNGLLDLEYEARAFDFGIAKF  118 (208)
Q Consensus        91 iH~dlk~~nilld~~~~~kl~dfgl~~~  118 (208)
                      ||+|+.+.||+++.+...-+.||+.+..
T Consensus       186 IHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         186 IHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             ECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccCCcchhhhhcccccceeEeccccccc
Confidence            9999999999999988888999997754

>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Ngr ectodomain-like
domain: Slit
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.72  E-value=0.58  Score=32.68  Aligned_cols=35  Identities=14%  Similarity=0.079  Sum_probs=24.3

Q ss_pred             CCCCEEecccCCCcccCCCC--cccCcCCcccccCCC
Q 039937            2 HWLSRIDISYNALQGPIPDS--TTFRDAPMKALQGNK   36 (208)
Q Consensus         2 ~~L~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~   36 (208)
                      +++++|+||+|++++.++..  ..+..+....+.+|.
T Consensus        29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~   65 (192)
T d1w8aa_          29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ   65 (192)
T ss_dssp             TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSC
T ss_pred             CCCCEEEeCCCCCcccccccccCCCceEeeeeccccc
Confidence            36899999999999877664  234555555555553

>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Ngr ectodomain-like
domain: High affinity nerve growth factor receptor, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.58  E-value=0.56  Score=31.87  Aligned_cols=15  Identities=27%  Similarity=0.253  Sum_probs=9.7

Q ss_pred             CCCCEEecccCC-Ccc
Q 039937            2 HWLSRIDISYNA-LQG   16 (208)
Q Consensus         2 ~~L~~l~ls~N~-l~g   16 (208)
                      ++|+.|++++|+ ++.
T Consensus        31 ~~l~~L~l~~n~~l~~   46 (156)
T d2ifga3          31 ENLTELYIENQQHLQH   46 (156)
T ss_dssp             SCCSEEECCSCSSCCE
T ss_pred             cccCeeecCCCccccc
Confidence            567778876554 544