Citrus Sinensis ID: 040075

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----

MGRGKIEIARIESRTNRQVTFSKRRGGLLKKARELSVLCDAEIGLIIFSCTGKLTEFCSESTSIEEIIRRYQAAKGVRIPAGVSNHDSEAIYNELGRMRKETHNLELSLRRYTGDIDLNSVKLEELTQLEHQLECSVKKVRVRKMEILRQQTDNLLRKEKMLEEENEQIFSLLKDNNNQMAWEQQQQQQAAMVSKFEEHGQVLDQFPFSGEAQPSSVLELAIPHYQPFRLQPTQPNLQDFGLHFPTFGILYILF

cccccccHHccccccccccccccccccccHHHHHHHHcccccEEEEEEcccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHccccccccccccccccccccccccccccccEEccc

MGRGKIEIARIESRTNRQVTFSKRRGGLLKKARELSVLCDAEIGLIIFSCTGKLTEFCSESTSIEEIIRRYQAAKGVRIPAGVSNHDSEAIYNELGRMRKETHNLELSLRRYTGDIDLNSVKLEELTQLEHQLECSVKKVRVRKMEILRQQTDNLLRKEKMLEEENEQIFSLLKDN****************************************VLELAIPHYQPFRLQPTQPNLQDFGLHFPTFGILYILF

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MGRGKIEIARIESRTNRQVTFSKRRGGLLKKARELSVLCDAEIGLIIFSCTGKLTEFCSESTSIEEIIRRYQAAKGVRIPAGVSNHDSEAIYNELGRMRKETHNLELSLRRYTGDIDLNSVKLEELTQLEHQLECSVKKVRVRKxxxxxxxxxxxxxxxxxxxxxxxxIFSLLKDNNNQMAWEQQQQQQAAMVSKFEEHGQVLDQFPFSGEAQPSSVLELAIPHYQPFRLQPTQPNLQDFGLHFPTFGILYILF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
MADS-box protein defh21	Probable transcription factor.	probable	Q8RVL4
MADS-box transcription factor 29	Probable transcription factor.	probable	Q6H711
Protein TRANSPARENT TESTA 16	Transcription factor involved in the developmental regulation of the endothelium and in the accumulation of proanthocyanidins (PAs) or condensed tannins which give the seed its brown pigmentation after oxidation. Necessary for the normal activation of the BANYULS promoter in the endothelium body.	probable	Q8RYD9

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1EGW, chain A
Confidence level:very confident
Coverage over the Query: 2-74
View the alignment between query and template
View the model in PyMOL