Citrus Sinensis ID: 040138

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
Protein Sequence
MGKPLVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGGGNCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccEEEEcccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccEEEEEccccccccccccEEEEEEccccEEEEEEEEccccccccccccccccccccccccccHHHHHHHcccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccccccEEEEcccccccccccEEEccccccccccccccccccccccccccEEEEcccccccccEEEEEcccccccccccccHcccccccccccEEEEEccccccccccccEEEEEcccccEEEEEEEEccccccccccccccccccccccccccHHHHHHHcccccccEEEEEEEcc
Coil and Loop (DISEMBL)
MGKPLVSLASLSLLTFFctislplysnaisqcngpcgtlddcdgqlicingkcnddpdvgthickggegggggncqpsgtltcqgnsyptykcsppvtsstqarltnndfseggdgggpsecdgqyhdnskpiaalstgwysggsrcgkMIRITANNGRSVLAQVVDecdsmrgcdeehagqppcdnnivdgSDAVWSAlgldkeigivdvtwsms
Flexible Loop (DISEMBL)
MGKPLVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGGGNCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS
Low Complexity Region (SEG)
MGKPLVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKggegggggNCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFseggdgggpsecdgQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS
Disordered region (IsUnstruct)
*****VSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHIC********************************************************************IAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGC*********CDNNIVDGSDAVWSALGLDKEIGIVDVTW***
Disordered Region (DISOPRED)
******S*ASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDV************************QGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS
Disordered Region (DISEMBL)
MGKPLVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGGGNCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS
Disordered Region (DISPRO)
*GKPLVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGE*************TCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKPLVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGGGNCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	216	2.2.26 [Sep-21-2011]
P84527	189	Kiwellin OS=Actinidia del	N/A	no	0.870	0.994	0.767	2e-80
Q9M4H4	220	Ripening-related protein	no	no	0.972	0.954	0.668	3e-74
Q6H5X0	192	Putative ripening-related	yes	no	0.680	0.765	0.592	1e-44
Q7XVA8	183	Putative ripening-related	no	no	0.680	0.803	0.633	3e-41
Q9FWU1	216	Putative ripening-related	no	no	0.671	0.671	0.543	2e-35
Q8LN49	276	Putative ripening-related	no	no	0.587	0.460	0.5	2e-33
Q9FWT5	213	Ripening-related protein	no	no	0.652	0.661	0.522	2e-32
Q7XD66	167	Putative ripening-related	no	no	0.527	0.682	0.563	5e-24
Q7XD65	162	Putative ripening-related	no	no	0.472	0.629	0.487	4e-22

>sp|P84527|KIWEL_ACTDE Kiwellin OS=Actinidia deliciosa PE=1 SV=1

 Score =  298 bits (762), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 145/189 (76%), Positives = 163/189 (86%), Gaps = 1/189 (0%)

Query: 29  ISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGG-EGGGGGNCQPSGTLTCQGNS 87
           IS CNGPC  L+DCDGQLICI GKCNDDP VGTHIC+G       G C+PSGTLTC+G S
Sbjct: 1   ISSCNGPCRDLNDCDGQLICIKGKCNDDPQVGTHICRGTTHSHQPGGCKPSGTLTCRGKS 60

Query: 88  YPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRC 147
           YPTY CSPPVTSST A+LTNNDFSEGGD GGPSECD  YH+N++ I ALSTGWY+GGSRC
Sbjct: 61  YPTYDCSPPVTSSTPAKLTNNDFSEGGDDGGPSECDESYHNNNERIVALSTGWYNGGSRC 120

Query: 148 GKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIG 207
           GKMIRITA+NG+SV A+VVDECDS  GCD+EHAGQPPC NNIVDGS+AVWSALGLDK +G
Sbjct: 121 GKMIRITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNVG 180

Query: 208 IVDVTWSMS 216
           +VD+TWSM+
Sbjct: 181 VVDITWSMA 189

Kissper is an anion-selective pore-forming peptide.
Actinidia deliciosa (taxid: 3627)

>sp|Q9M4H4|GRI22_VITVI Ripening-related protein grip22 OS=Vitis vinifera GN=grip22 PE=2 SV=1

 Score =  277 bits (709), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 145/217 (66%), Positives = 167/217 (76%), Gaps = 7/217 (3%)

Query: 5   LVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHIC 64
           LV LAS+ L+  F  +SLP  +  +S C G C TL+D +GQLICING+CNDDP+VGTHIC
Sbjct: 6   LVWLASVCLV--FNILSLPFLALGLSSCGGSCQTLNDYEGQLICINGECNDDPEVGTHIC 63

Query: 65  KGGEGGGGGNCQPS----GTLTCQGNS-YPTYKCSPPVTSSTQARLTNNDFSEGGDGGGP 119
            G           +    GTL C+G     TY CSPP+TSST A LTNN+F +GGDGGGP
Sbjct: 64  GGNSSTPSPPPPSTCQPSGTLACKGGKPKNTYTCSPPITSSTPAVLTNNNFEKGGDGGGP 123

Query: 120 SECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEH 179
           S CD +YHDNS+ I ALSTGWY+GGSRCGKMIRITA NGRSVLA+VVDECDSM GCD+EH
Sbjct: 124 SACDNKYHDNSERIVALSTGWYNGGSRCGKMIRITAQNGRSVLAKVVDECDSMHGCDKEH 183

Query: 180 AGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS 216
           AGQPPCDNNIVDGS+AVW+ALGLD  IG VDVTWSM+
Sbjct: 184 AGQPPCDNNIVDGSNAVWNALGLDINIGEVDVTWSMA 220

Vitis vinifera (taxid: 29760)

>sp|Q6H5X0|RIP2_ORYSJ Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637000 PE=3 SV=1

 Score =  179 bits (455), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/162 (59%), Positives = 113/162 (69%), Gaps = 15/162 (9%)

Query: 65  KGGEGGGGGNCQPSGTL------TCQ-----GNSYPTYKCSPPVTSSTQARLTNNDFSEG 113
           +G E  GG  C PSGTL      +CQ     G SYPTY CSP  T ST+A +T NDF  G
Sbjct: 32  RGRELAGG--CNPSGTLRPSRSHSCQDCCKAGRSYPTYACSPATTGSTKAVMTLNDFEAG 89

Query: 114 GDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMR 173
           GDGG PSECDG++H N++ + ALSTGWY+ G RC K IRI A NGRSVLA+VVDECDS+ 
Sbjct: 90  GDGGDPSECDGKFHKNTERVVALSTGWYANGRRCNKNIRINA-NGRSVLAKVVDECDSLH 148

Query: 174 GCDEEHAGQPPCDNNIVDGSDAVWSALGLDKE-IGIVDVTWS 214
           GCD+EHA QPPC  N+VD S AVW AL +  E +G  D+TWS
Sbjct: 149 GCDKEHAYQPPCRPNVVDASQAVWDALRITGEDVGEYDITWS 190

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XVA8|RIP1_ORYSJ Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica GN=Os04g0364800 PE=3 SV=2

 Score =  167 bits (424), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/161 (63%), Positives = 113/161 (70%), Gaps = 14/161 (8%)

Query: 67  GEGGGGGNCQPSG------TLTCQ-----GNSYPTYKCSPPVT-SSTQARLTNNDFSEGG 114
           G   G G C PSG      T  CQ     G SYPTY CSPP T SST A +T NDF  GG
Sbjct: 22  GLSRGDGECNPSGAIRSSTTHRCQDCCKAGQSYPTYTCSPPTTGSSTDAVMTLNDFDAGG 81

Query: 115 DGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRG 174
           DGGGPSECD  YH N++ + ALSTGWY+GGSRCGK +RI A NGRSVLA+VVDECDS RG
Sbjct: 82  DGGGPSECDEMYHSNTELVVALSTGWYAGGSRCGKSVRINA-NGRSVLAKVVDECDSQRG 140

Query: 175 CDEEHAGQPPCDNNIVDGSDAVWSALGLDKE-IGIVDVTWS 214
           CDEEHA QPPC  N+VD S AVW ALG+  E +G  D+TWS
Sbjct: 141 CDEEHAYQPPCRPNVVDASQAVWDALGITGEDVGEYDITWS 181

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FWU1|RIP4_ORYSJ Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0490666 PE=3 SV=2

 Score =  149 bits (375), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/151 (54%), Positives = 103/151 (68%), Gaps = 6/151 (3%)

Query: 70  GGGGNCQPSGTLTC--QGNSYPTYKCSPPVTSS--TQARLTNNDFSEGGDGGGPSECDGQ 125
           G  G C  +    C   G  YP ++CSPPV+S+  T A LT N F+ GGDGGG S CDG+
Sbjct: 64  GKAGKCNRAHGSDCCVTGRRYPQFRCSPPVSSARPTPATLTLNSFARGGDGGGRSSCDGR 123

Query: 126 YHDNSKPIAALSTGWYS--GGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQP 183
           +H ++  + ALS+GW    G SRC +MIR+ A NGRS LA+VVDECDS+ GCD EH  +P
Sbjct: 124 FHPDTAMVVALSSGWLRLDGASRCNRMIRVAAGNGRSALARVVDECDSVNGCDAEHNFEP 183

Query: 184 PCDNNIVDGSDAVWSALGLDKEIGIVDVTWS 214
           PC N++VDGS AVW ALGLD+ +G   VTWS
Sbjct: 184 PCPNDVVDGSPAVWKALGLDEGVGEFKVTWS 214

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8LN49|RIP5_ORYSJ Putative ripening-related protein 5 OS=Oryza sativa subsp. japonica GN=Os10g0490500 PE=3 SV=1

 Score =  142 bits (358), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 93/148 (62%), Gaps = 21/148 (14%)

Query: 70  GGGGNCQPSGTLTC--QGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYH 127
           G  GNC+ S    C   G +YP Y+                 F +G DGGGPSECD  YH
Sbjct: 35  GKSGNCEKSNDPDCCEDGKAYPQYR-----------------FEKGKDGGGPSECDNAYH 77

Query: 128 DNSKPIAALSTGWYSGGSRCGKMIRITANNG--RSVLAQVVDECDSMRGCDEEHAGQPPC 185
            + + + ALSTGW++G +RCG  +RITA+ G  RSV+A+VVDECDS+ GCD EH  + PC
Sbjct: 78  SDGELVVALSTGWFAGTARCGHRVRITASGGGGRSVVAKVVDECDSVHGCDGEHNYEAPC 137

Query: 186 DNNIVDGSDAVWSALGLDKEIGIVDVTW 213
            NNIVD S AVW ALGLDK +G+  +TW
Sbjct: 138 GNNIVDASPAVWDALGLDKNVGMEHITW 165

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FWT5|RIP3_ORYSJ Ripening-related protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0490100 PE=2 SV=1

 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/159 (52%), Positives = 102/159 (64%), Gaps = 18/159 (11%)

Query: 74  NCQPSGTLT--------------CQ-GNSYPTYKCSPPVT---SSTQARLTNNDFSEGGD 115
           +CQPSG +T              CQ G  Y TY CSPPV    + T A LT N F++GGD
Sbjct: 53  SCQPSGAITGTSGDCNADNGSECCQDGVQYMTYACSPPVAAGGTGTAALLTLNSFADGGD 112

Query: 116 GGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGC 175
           GGG   C G+++D+ + + ALSTGW+ G SRC K + I A+ G SV A VVDECDS RGC
Sbjct: 113 GGGAPSCTGRFYDDGQLVVALSTGWFDGRSRCEKDVVIRASGGASVTAMVVDECDSQRGC 172

Query: 176 DEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWS 214
           D +H  +PPC NNIVDGS AVW ALGL+K+ G   +TWS
Sbjct: 173 DSDHNFEPPCRNNIVDGSPAVWDALGLNKDDGEAQITWS 211

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XD66|RIP6_ORYSJ Putative ripening-related protein 6 OS=Oryza sativa subsp. japonica GN=Os10g0489301 PE=3 SV=1

 Score =  110 bits (276), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/126 (56%), Positives = 85/126 (67%), Gaps = 12/126 (9%)

Query: 92  KCSPPVTSS--TQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGK 149
           +CS P  S   T A +T N F EG DGGGP+ CDG+YH +   +AALSTGW++GG RC +
Sbjct: 49  RCSSPAVSEDGTPAVMTVNGFEEGEDGGGPAACDGRYHSDRSLVAALSTGWFAGGRRCHR 108

Query: 150 MIRITAN-NGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGI 208
            IRIT+  NGRSV+A VVDECDS       H G   C ++IVD S AVWSALGLD  +G 
Sbjct: 109 GIRITSRQNGRSVVATVVDECDS------RHGG---CKDDIVDTSAAVWSALGLDTNVGE 159

Query: 209 VDVTWS 214
           V VTWS
Sbjct: 160 VPVTWS 165

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XD65|RIP7_ORYSJ Putative ripening-related protein 7 OS=Oryza sativa subsp. japonica GN=Os10g0489400 PE=3 SV=1

 Score =  104 bits (260), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/121 (48%), Positives = 73/121 (60%), Gaps = 19/121 (15%)

Query: 103 ARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANN----- 157
           A +T N F +G DGGGP+ CDG YH + + I ALST W++GG RC + IRIT +      
Sbjct: 50  AVMTVNGFEKGEDGGGPAACDGHYHSDGELIVALSTEWFAGGRRCHRRIRITPSEHGRRG 109

Query: 158 ----GRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTW 213
                R+V A VVDECDS RG          C +++VD S AVW ALGLD + G V VTW
Sbjct: 110 GGGGRRAVEATVVDECDSRRG----------CKDDVVDSSPAVWRALGLDTDSGEVRVTW 159

Query: 214 S 214
           S
Sbjct: 160 S 160

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
225435367	216	PREDICTED: ripening-related protein grip	0.912	0.912	0.768	2e-82
297746287	382	unnamed protein product [Vitis vinifera]	0.949	0.536	0.693	8e-81
441482364	213	kiwellin [Actinidia arguta]	0.912	0.924	0.757	2e-80
441482352	213	kiwellin [Actinidia deliciosa]	0.912	0.924	0.752	3e-80
225435371	217	PREDICTED: ripening-related protein grip	0.990	0.986	0.703	3e-80
441482360	213	kiwellin [Actinidia eriantha]	0.912	0.924	0.752	4e-80
225435373	230	PREDICTED: kiwellin-like [Vitis vinifera	0.949	0.891	0.693	1e-79
441482356	213	kiwellin [Actinidia eriantha]	0.875	0.887	0.768	2e-79
358348067	220	Ripening-related protein grip22 [Medicag	0.981	0.963	0.668	3e-79
441482358	213	kiwellin [Actinidia eriantha]	0.875	0.887	0.768	3e-79

>gi|225435367|ref|XP_002285296.1| PREDICTED: ripening-related protein grip22-like [Vitis vinifera]

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 153/199 (76%), Positives = 170/199 (85%), Gaps = 2/199 (1%)

Query: 20  ISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICK--GGEGGGGGNCQP 77
            SLP  + AIS C GPC TL+DC+GQLIC++GKCNDDPDVGTHIC+        G NCQ 
Sbjct: 18  FSLPFLAFAISSCGGPCQTLNDCEGQLICVSGKCNDDPDVGTHICQTPSPSPPSGSNCQA 77

Query: 78  SGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALS 137
           SGTLTC G SYPTY+CSP VTSST A+LTNNDFSEGGDGGG SECD QYH NS+ I ALS
Sbjct: 78  SGTLTCGGISYPTYRCSPRVTSSTPAKLTNNDFSEGGDGGGASECDEQYHSNSERIVALS 137

Query: 138 TGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVW 197
           TGWY+GGSRCGKMIRITA NGRSV+A+VVDECDSMRGCD+EHA QPPC NNIVDGSDAVW
Sbjct: 138 TGWYNGGSRCGKMIRITAQNGRSVVAKVVDECDSMRGCDQEHAYQPPCKNNIVDGSDAVW 197

Query: 198 SALGLDKEIGIVDVTWSMS 216
           SALGLDK+IG+VDVTW+M+
Sbjct: 198 SALGLDKDIGVVDVTWTMA 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746287|emb|CBI16343.3| unnamed protein product [Vitis vinifera]

 Score =  305 bits (781), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 147/212 (69%), Positives = 171/212 (80%), Gaps = 7/212 (3%)

Query: 5   LVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHIC 64
           L+SL  +  ++FF     P  + AIS CNGPC T +DCDG+LICINGKCNDDP++GTH+C
Sbjct: 4   LLSLCLIYTISFF-----PFLAFAISSCNGPCRTFNDCDGELICINGKCNDDPELGTHVC 58

Query: 65  KG--GEGGGGGNCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSEC 122
           +G        G C  SG+L C+G  YPTY CSP +TSST A LTNNDFSEGGDGGGPSEC
Sbjct: 59  EGVPSPPPPSGYCHSSGSLRCKGQYYPTYTCSPQITSSTSAILTNNDFSEGGDGGGPSEC 118

Query: 123 DGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQ 182
           DG+YH+NS PI ALSTGWY+GG RCGKMI+ITA+NGRSVLA+VVDECDS+RGCDEEH+ Q
Sbjct: 119 DGKYHNNSDPIVALSTGWYNGGFRCGKMIKITADNGRSVLAKVVDECDSLRGCDEEHSDQ 178

Query: 183 PPCDNNIVDGSDAVWSALGLDKEIGIVDVTWS 214
           PPC NNIV+GSDAVWSALGLD  +G VDVTWS
Sbjct: 179 PPCKNNIVNGSDAVWSALGLDTNLGEVDVTWS 210

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|441482364|gb|AGC39173.1| kiwellin [Actinidia arguta]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/198 (75%), Positives = 169/198 (85%), Gaps = 1/198 (0%)

Query: 20  ISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGG-GNCQPS 78
           ISLP    +IS CNGPC  L+DC+GQLICI GKCNDDP+VGTHIC G       G+C+PS
Sbjct: 16  ISLPPPGASISSCNGPCRDLNDCNGQLICIKGKCNDDPEVGTHICGGTTPSPQPGSCKPS 75

Query: 79  GTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALST 138
           GTLTCQG SYPTY CSPPVTSST A+LTNNDFSEGGDGGGPSECD  YH N++ I ALST
Sbjct: 76  GTLTCQGKSYPTYDCSPPVTSSTPAKLTNNDFSEGGDGGGPSECDESYHSNNERIVALST 135

Query: 139 GWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWS 198
           GWY+GGSRCGKMIRITA+NG+SV A+VVDECDS  GCD+EHAGQPPC NNIVDGS+AVWS
Sbjct: 136 GWYNGGSRCGKMIRITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWS 195

Query: 199 ALGLDKEIGIVDVTWSMS 216
           ALGLDK +G+VD+TWSM+
Sbjct: 196 ALGLDKNVGVVDITWSMA 213

Source: Actinidia arguta

Species: Actinidia arguta

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|441482352|gb|AGC39167.1| kiwellin [Actinidia deliciosa]

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 149/198 (75%), Positives = 169/198 (85%), Gaps = 1/198 (0%)

Query: 20  ISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGG-GNCQPS 78
           ISLP    +IS CNGPC  L+DCDGQLICI GKCNDDP+VGTHIC+G       G C+PS
Sbjct: 16  ISLPPPGASISSCNGPCRDLNDCDGQLICIEGKCNDDPEVGTHICRGTTPSPQPGGCKPS 75

Query: 79  GTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALST 138
           GTLTC+G S+PTY CSPPVTSST A+LTNNDFSEGGDGGGPSECD  YH N++ I ALST
Sbjct: 76  GTLTCRGKSHPTYDCSPPVTSSTPAKLTNNDFSEGGDGGGPSECDESYHSNNERIVALST 135

Query: 139 GWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWS 198
           GWY+GGSRCGKMIRITA+NG+SV A+VVDECDS  GCD+EHAGQPPC NNIVDGS+AVWS
Sbjct: 136 GWYNGGSRCGKMIRITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWS 195

Query: 199 ALGLDKEIGIVDVTWSMS 216
           ALGLDK +G+VD+TWSM+
Sbjct: 196 ALGLDKNVGVVDITWSMA 213

Source: Actinidia deliciosa

Species: Actinidia deliciosa

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435371|ref|XP_002285310.1| PREDICTED: ripening-related protein grip22 [Vitis vinifera]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 154/219 (70%), Positives = 170/219 (77%), Gaps = 5/219 (2%)

Query: 1   MGKPLVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVG 60
           M   ++ L SL LL  F   SLP     +S CN PC TLDDC+GQLICING+CNDDPD+G
Sbjct: 1   MANQVLFLQSLYLL--FSIFSLPFLPLVMSSCNDPCQTLDDCEGQLICINGQCNDDPDLG 58

Query: 61  THICKGGEGGGG---GNCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGG 117
           THIC G  G       +CQPSG+L C G SYPTY CSP VTSST A LT NDFSEGGDGG
Sbjct: 59  THICGGSPGTSSPSTDDCQPSGSLECNGQSYPTYTCSPQVTSSTSAVLTKNDFSEGGDGG 118

Query: 118 GPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDE 177
           GPS+CD +YH+NS PI ALSTGWY+GGS CGKMIRITA NG SVLA+VVDECDSM GCD+
Sbjct: 119 GPSKCDDKYHENSDPIIALSTGWYNGGSLCGKMIRITAQNGMSVLAKVVDECDSMHGCDQ 178

Query: 178 EHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS 216
           EHAGQ PCDNNIVDGS+AVW ALGLD  IG VDVTWSM+
Sbjct: 179 EHAGQRPCDNNIVDGSNAVWDALGLDINIGRVDVTWSMA 217

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|441482360|gb|AGC39171.1| kiwellin [Actinidia eriantha]

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 149/198 (75%), Positives = 168/198 (84%), Gaps = 1/198 (0%)

Query: 20  ISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGG-GNCQPS 78
           ISL     +IS CNGPC  L+DCDGQLICI GKCNDDP+VGTHIC+G       G C PS
Sbjct: 16  ISLAPSGASISSCNGPCRDLNDCDGQLICIKGKCNDDPEVGTHICRGTTPSPQPGGCNPS 75

Query: 79  GTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALST 138
           GTLTC+G SYPTY CSPPVTSST A+LTNNDFSEGGDGGGPSECD +YH N++ I ALST
Sbjct: 76  GTLTCRGKSYPTYDCSPPVTSSTPAKLTNNDFSEGGDGGGPSECDERYHSNNERIVALST 135

Query: 139 GWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWS 198
           GWY+GGSRCGKMIRITA+NG+SV A+VVDECDS  GCD+EHAGQPPC NNIVDGS+AVWS
Sbjct: 136 GWYNGGSRCGKMIRITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWS 195

Query: 199 ALGLDKEIGIVDVTWSMS 216
           ALGLDK +G+VD+TWSM+
Sbjct: 196 ALGLDKNVGVVDITWSMA 213

Source: Actinidia eriantha

Species: Actinidia eriantha

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435373|ref|XP_002282561.1| PREDICTED: kiwellin-like [Vitis vinifera]

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 147/212 (69%), Positives = 171/212 (80%), Gaps = 7/212 (3%)

Query: 5   LVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHIC 64
           L+SL  +  ++FF     P  + AIS CNGPC T +DCDG+LICINGKCNDDP++GTH+C
Sbjct: 7   LLSLCLIYTISFF-----PFLAFAISSCNGPCRTFNDCDGELICINGKCNDDPELGTHVC 61

Query: 65  KG--GEGGGGGNCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSEC 122
           +G        G C  SG+L C+G  YPTY CSP +TSST A LTNNDFSEGGDGGGPSEC
Sbjct: 62  EGVPSPPPPSGYCHSSGSLRCKGQYYPTYTCSPQITSSTSAILTNNDFSEGGDGGGPSEC 121

Query: 123 DGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQ 182
           DG+YH+NS PI ALSTGWY+GG RCGKMI+ITA+NGRSVLA+VVDECDS+RGCDEEH+ Q
Sbjct: 122 DGKYHNNSDPIVALSTGWYNGGFRCGKMIKITADNGRSVLAKVVDECDSLRGCDEEHSDQ 181

Query: 183 PPCDNNIVDGSDAVWSALGLDKEIGIVDVTWS 214
           PPC NNIV+GSDAVWSALGLD  +G VDVTWS
Sbjct: 182 PPCKNNIVNGSDAVWSALGLDTNLGEVDVTWS 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|441482356|gb|AGC39169.1| kiwellin [Actinidia eriantha]

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 146/190 (76%), Positives = 165/190 (86%), Gaps = 1/190 (0%)

Query: 28  AISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGG-GNCQPSGTLTCQGN 86
           +IS CNGPC  L+DCDGQLICI GKCNDDP+VGTHIC+G       G C PSGTLTC+G 
Sbjct: 24  SISSCNGPCRDLNDCDGQLICIKGKCNDDPEVGTHICRGTTPSPQPGGCNPSGTLTCRGK 83

Query: 87  SYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSR 146
           SYPTY CSPPVTSST A+LTNNDFSEGGDGGGPSECD +YH N++ I ALSTGWY+GGSR
Sbjct: 84  SYPTYDCSPPVTSSTPAKLTNNDFSEGGDGGGPSECDERYHSNNERIVALSTGWYNGGSR 143

Query: 147 CGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEI 206
           CGKMIRITA+NG+SV A+VVDECDS  GCD+EHAGQPPC NNIVDGS+AVWSALGLDK +
Sbjct: 144 CGKMIRITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNV 203

Query: 207 GIVDVTWSMS 216
           G+VD+TWSM+
Sbjct: 204 GVVDITWSMA 213

Source: Actinidia eriantha

Species: Actinidia eriantha

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358348067|ref|XP_003638071.1| Ripening-related protein grip22 [Medicago truncatula] gi|355504006|gb|AES85209.1| Ripening-related protein grip22 [Medicago truncatula]

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/217 (66%), Positives = 172/217 (79%), Gaps = 5/217 (2%)

Query: 5   LVSLASLSLLTFFCTISLPLYSNAISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHIC 64
           + +L  L+ +  F  I++P  +NAIS CNGPC TL+DCDGQLICINGKCNDDPD+GTHIC
Sbjct: 4   ISNLIFLACIFLFNIINIPFLTNAISSCNGPCNTLNDCDGQLICINGKCNDDPDIGTHIC 63

Query: 65  KGGEGGGGG-----NCQPSGTLTCQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGP 119
                          CQ SGTL C+  SYP Y+CSPPV+SSTQA LT NDFSEGGDGGGP
Sbjct: 64  TNPSPSPPSGGGGGTCQSSGTLQCKKKSYPQYRCSPPVSSSTQASLTLNDFSEGGDGGGP 123

Query: 120 SECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEH 179
           S+CD +YHDNS+ + ALSTGWY+GGSRCGKMIRITA NGRSV A+VVD+CDS+ GCD+EH
Sbjct: 124 SQCDEKYHDNSERVVALSTGWYNGGSRCGKMIRITARNGRSVTAKVVDQCDSVNGCDKEH 183

Query: 180 AGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSMS 216
           AGQPPC NNIVDGS +VW+ALGL+ + G+V VTWSM+
Sbjct: 184 AGQPPCHNNIVDGSVSVWNALGLNTDDGVVPVTWSMA 220

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|441482358|gb|AGC39170.1| kiwellin [Actinidia eriantha]

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 146/190 (76%), Positives = 164/190 (86%), Gaps = 1/190 (0%)

Query: 28  AISQCNGPCGTLDDCDGQLICINGKCNDDPDVGTHICKGGEGGGG-GNCQPSGTLTCQGN 86
           +IS CNGPC  L+DCDGQLICI GKCNDDP VGTHIC+G       G C PSGTLTC+G 
Sbjct: 24  SISSCNGPCRDLNDCDGQLICIKGKCNDDPQVGTHICRGTTPSPQPGGCNPSGTLTCRGK 83

Query: 87  SYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSR 146
           SYPTY CSPPVTSST A+LTNNDFSEGGDGGGPSECD +YH N++ I ALSTGWY+GGSR
Sbjct: 84  SYPTYDCSPPVTSSTPAKLTNNDFSEGGDGGGPSECDERYHSNNERIVALSTGWYNGGSR 143

Query: 147 CGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEI 206
           CGKMIRITA+NG+SV A+VVDECDS  GCD+EHAGQPPC NNIVDGS+AVWSALGLDK +
Sbjct: 144 CGKMIRITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNV 203

Query: 207 GIVDVTWSMS 216
           G+VD+TWSM+
Sbjct: 204 GVVDITWSMA 213

Source: Actinidia eriantha

Species: Actinidia eriantha

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

No hits with e-value below 0.001 by BLAST

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P84527	KIWEL_ACTDE	No assigned EC number	0.7671	0.8703	0.9947	N/A	no
Q6H5X0	RIP2_ORYSJ	No assigned EC number	0.5925	0.6805	0.7656	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00024575001 SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (280 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	216
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	5e-05

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 21/91 (23%), Positives = 29/91 (31%), Gaps = 24/91 (26%)

Query: 133 IAALSTGWYSGGSRCGKMIRITAN----------NGRSVLAQVVDECDSMRGCDEEHAGQ 182
            AA S   Y+ G+ CG+  ++               RSV   + D C             
Sbjct: 1   TAAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVLRSVTVTITDRC------------- 47

Query: 183 PPCDNNIVDGSDAVWSALGLDKEIGIVDVTW 213
           P       D S   + AL      GIV V +
Sbjct: 48  PFPPRRHFDLSGPAFEALAK-PRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	216
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.84
PLN00193	256	expansin-A; Provisional	99.69
PLN00050	247	expansin A; Provisional	99.68
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.68
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.62
PLN03023	247	Expansin-like B1; Provisional	99.4
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	98.78
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	98.65
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	98.59
PRK10672	361	rare lipoprotein A; Provisional	98.52
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	97.92
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	97.8
PF07127	54	Nodulin_late: Late nodulin protein; InterPro: IPR0	94.48
PF02977	46	CarbpepA_inh: Carboxypeptidase A inhibitor; InterP	86.34

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.84  E-value=1.4e-20  Score=151.97  Aligned_cols=96  Identities=27%  Similarity=0.450  Sum_probs=82.7

Q ss_pred             cccceeEEEEeecCCCCCCCCCCCCCCCccCCCCcEEEeecccCCCCcCCCceEEEEeC----------CCCEEEEEEEe
Q 040138           98 TSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITAN----------NGRSVLAQVVD  167 (216)
Q Consensus        98 ~~~t~A~lT~y~f~~g~dgGg~gACG~~~~~d~d~VVALSsg~f~~g~~CGk~I~It~~----------NGkSV~atVVD  167 (216)
                      ...+.+++|||+.      +.++||++ .+.+++++|||++.+|++++.||++++|++.          |||+|+|+|+|
T Consensus        19 ~~~~~G~AT~Y~~------~~~gAC~~-~~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~c~gksV~V~VtD   91 (125)
T PLN03024         19 SYATPGIATFYTS------YTPSACYR-GTSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCTGKSVTVKIVD   91 (125)
T ss_pred             hcccceEEEEeCC------CCCccccC-CCCCCCEeEEeCHHHcCCCcccCceEEEEECCCCccccccccCCeEEEEEEc
Confidence            4467899999962      34579974 5778999999999999999999999999861          58999999999


Q ss_pred             CCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCCccEEEEEEE
Q 040138          168 ECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWS  214 (216)
Q Consensus       168 eC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~~G~i~VtWs  214 (216)
                      +||+            +|. ++||||+++|++|+ +.+.|+|+|+|.
T Consensus        92 ~CP~------------~C~-~~~DLS~~AF~~iA-~~~aG~v~V~y~  124 (125)
T PLN03024         92 HCPS------------GCA-STLDLSREAFAQIA-NPVAGIINIDYI  124 (125)
T ss_pred             CCCC------------CCC-CceEcCHHHHHHhc-CccCCEEEEEEe
Confidence            9973            465 59999999999999 789999999995

>PLN00193 expansin-A; Provisional

Probab=99.69  E-value=1.7e-16  Score=141.54  Aligned_cols=114  Identities=25%  Similarity=0.306  Sum_probs=91.1

Q ss_pred             cceeEEEEeecCCCCCCCCCCCCCCCc---cCCCCcEEEeecccCCCCcCCCceEEEEeC---------CCCEEEEEEEe
Q 040138          100 STQARLTNNDFSEGGDGGGPSECDGQY---HDNSKPIAALSTGWYSGGSRCGKMIRITAN---------NGRSVLAQVVD  167 (216)
Q Consensus       100 ~t~A~lT~y~f~~g~dgGg~gACG~~~---~~d~d~VVALSsg~f~~g~~CGk~I~It~~---------NGkSV~atVVD  167 (216)
                      =++|++|||.-.++ .|...||||+..   ...+.+++|||+.+|+++..||++++|+++         +|++|+++|+|
T Consensus        30 W~~a~AT~Yg~~d~-~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~~~~~~~C~~g~sV~Vt~td  108 (256)
T PLN00193         30 WTKAHATFYGGSDA-SGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCIKGASVTITATN  108 (256)
T ss_pred             ceeeEEEEcCCCCC-CCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECCCCCCCccccCCCeEEEEEec
Confidence            46799999975333 223458999752   234678999999999999999999999972         47799999999


Q ss_pred             CCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCCccEEEEEEEe
Q 040138          168 ECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSM  215 (216)
Q Consensus       168 eC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~~G~i~VtWs~  215 (216)
                      +||...+-+++.+.|..=+..|+|||+.||.+|+ ....|+|+|+|+-
T Consensus       109 ~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA-~~~~Giv~V~yrR  155 (256)
T PLN00193        109 FCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIG-IYRGGIVPVLFQR  155 (256)
T ss_pred             CCCCcccccccCCCcCCCCCcccccCHHHHHHHh-hhcCCeEeEEEEE
Confidence            9998766666666653335589999999999999 5789999999963

>PLN00050 expansin A; Provisional

Probab=99.68  E-value=2.6e-16  Score=139.70  Aligned_cols=114  Identities=22%  Similarity=0.256  Sum_probs=90.7

Q ss_pred             cceeEEEEeecCCCCCCCCCCCCCCCcc---CCCCcEEEeecccCCCCcCCCceEEEEeCCC------CEEEEEEEeCCC
Q 040138          100 STQARLTNNDFSEGGDGGGPSECDGQYH---DNSKPIAALSTGWYSGGSRCGKMIRITANNG------RSVLAQVVDECD  170 (216)
Q Consensus       100 ~t~A~lT~y~f~~g~dgGg~gACG~~~~---~d~d~VVALSsg~f~~g~~CGk~I~It~~NG------kSV~atVVDeC~  170 (216)
                      =..|++|||.-.++ .|...||||+...   ..+.+++|||+.+|+++..||.+++|+++++      ++|+++|+|+||
T Consensus        25 W~~a~AT~Yg~~dg-~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~~~~C~~gsV~V~itd~CP  103 (247)
T PLN00050         25 WTGAHATFYGGGDA-SGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPGSIIITATNFCP  103 (247)
T ss_pred             ccccEEEEcCCCCC-CCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCCCcccCCCcEEEEEecCCC
Confidence            46799999975433 2234589997531   3467999999999999999999999998433      389999999999


Q ss_pred             CCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCCccEEEEEEEe
Q 040138          171 SMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSM  215 (216)
Q Consensus       171 s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~~G~i~VtWs~  215 (216)
                      ...+.+.+.+.|..=+..|||||+.||.+|+ ....|+|+|+|+-
T Consensus       104 ~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA-~~~aGii~V~yRR  147 (247)
T PLN00050        104 PNLALPNNDGGWCNPPQQHFDLSQPVFQKIA-QYKAGIVPVQYRR  147 (247)
T ss_pred             CCcCcCccCCCcCCCCCcccccCHHHHHHHh-hhcCCeeeeEEEE
Confidence            8777666555553225589999999999999 6889999999973

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.68  E-value=6.8e-17  Score=118.44  Aligned_cols=67  Identities=39%  Similarity=0.724  Sum_probs=58.2

Q ss_pred             EEEeecccCCCCcCCCceEEEEe---C-C-----C--CEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhc
Q 040138          133 IAALSTGWYSGGSRCGKMIRITA---N-N-----G--RSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALG  201 (216)
Q Consensus       133 VVALSsg~f~~g~~CGk~I~It~---~-N-----G--kSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg  201 (216)
                      .||++..||+++..||++++++.   . .     .  |+|+|+|+|+||             .|.+++||||+++|++|+
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp-------------~~~~~~lDLS~~aF~~la   67 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCP-------------GCPPNHLDLSPAAFKALA   67 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-T-------------TSSSSEEEEEHHHHHHTB
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCC-------------CCcCCEEEeCHHHHHHhC
Confidence            48999999999999999999998   1 1     2  999999999995             589999999999999999


Q ss_pred             cCCCccEEEEEE
Q 040138          202 LDKEIGIVDVTW  213 (216)
Q Consensus       202 ~~~~~G~i~VtW  213 (216)
                       +.+.|+++|+|
T Consensus        68 -~~~~G~i~V~w   78 (78)
T PF03330_consen   68 -DPDAGVIPVEW   78 (78)
T ss_dssp             -STTCSSEEEEE
T ss_pred             -CCCceEEEEEC
Confidence             78999999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.62  E-value=1.2e-15  Score=116.13  Aligned_cols=80  Identities=24%  Similarity=0.375  Sum_probs=67.2

Q ss_pred             EEEeecccCCCCcCCCceEEEEeC-------CCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCC
Q 040138          133 IAALSTGWYSGGSRCGKMIRITAN-------NGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKE  205 (216)
Q Consensus       133 VVALSsg~f~~g~~CGk~I~It~~-------NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~  205 (216)
                      ++|||+.+|+++..||++++|++.       +|++|+|+|+|+|+...+.+.+.+.|..=+..|||||+.||.+|+ ...
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA-~~~   79 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIA-QYK   79 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHh-hhc
Confidence            489999999999999999999962       457999999999998766655555442224689999999999999 689


Q ss_pred             ccEEEEEE
Q 040138          206 IGIVDVTW  213 (216)
Q Consensus       206 ~G~i~VtW  213 (216)
                      .|+|+|+|
T Consensus        80 ~Gvi~v~y   87 (87)
T smart00837       80 AGIVPVKY   87 (87)
T ss_pred             CCEEeeEC
Confidence            99999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PLN03023 Expansin-like B1; Provisional

Probab=99.40  E-value=1.5e-12  Score=115.82  Aligned_cols=98  Identities=22%  Similarity=0.265  Sum_probs=78.0

Q ss_pred             ceeEEEEeecCCCCCCCCCCCCCCCc---cCCCCcEEEeecccCCCCcCCCceEEEEeC-----CCCEEEEEEEeCCCCC
Q 040138          101 TQARLTNNDFSEGGDGGGPSECDGQY---HDNSKPIAALSTGWYSGGSRCGKMIRITAN-----NGRSVLAQVVDECDSM  172 (216)
Q Consensus       101 t~A~lT~y~f~~g~dgGg~gACG~~~---~~d~d~VVALSsg~f~~g~~CGk~I~It~~-----NGkSV~atVVDeC~s~  172 (216)
                      .+|++|||.-.+| .|...||||+..   ..++-+++|+| .+|++|..||+|++|++.     .+++|+++|+|.|+  
T Consensus        26 ~~a~AT~Yg~~~g-~gt~gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~~~~~C~~~~v~V~iTd~~~--  101 (247)
T PLN03023         26 TYSRATYYGSPDC-LGTPTGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCKAPNLCSDDGVNVVVTDYGE--  101 (247)
T ss_pred             ccceEEEeCCCCC-CCCCCccccCCccccCCCcceeeeeh-hhhcCCchhcccEEeecCCCCccCCCCeEEEEEeCCC--
Confidence            5689999985433 334568999743   23457899998 899999999999999983     35689999999995  


Q ss_pred             CCCCcCCCCCCCCCCCeeecCHHHHHHhccC------CCccEEEEEEE
Q 040138          173 RGCDEEHAGQPPCDNNIVDGSDAVWSALGLD------KEIGIVDVTWS  214 (216)
Q Consensus       173 ~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~------~~~G~i~VtWs  214 (216)
                                  ..+.|+|||..||.+|+.+      ...|+|+|+++
T Consensus       102 ------------~~~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~Yr  137 (247)
T PLN03023        102 ------------GDKTDFILSPRAYARLARPNMAAELFAYGVVDVEYR  137 (247)
T ss_pred             ------------CCCCccccCHHHHHHHhCccccchhccCcEEEeEEE
Confidence                        2468999999999999953      34699999985

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=98.78  E-value=7.4e-09  Score=83.17  Aligned_cols=57  Identities=30%  Similarity=0.580  Sum_probs=42.6

Q ss_pred             CCcCCCceEEEEe-CCCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCC---CccEEEEEEEe
Q 040138          143 GGSRCGKMIRITA-NNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDK---EIGIVDVTWSM  215 (216)
Q Consensus       143 ~g~~CGk~I~It~-~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~---~~G~i~VtWs~  215 (216)
                      +...|||+++||+ .+|.+++|+|||+|.                ++.|||.+.||.+|--+-   ..|.+.|+|+|
T Consensus        56 gq~~CGkClrVTNt~tga~~~~RIVDqCs----------------nGGLDld~~vF~~iDtdG~G~~~Ghl~V~y~f  116 (119)
T PF00967_consen   56 GQDSCGKCLRVTNTATGAQVTVRIVDQCS----------------NGGLDLDPTVFNQIDTDGQGYAQGHLIVDYEF  116 (119)
T ss_dssp             SGGGTT-EEEEE-TTT--EEEEEEEEE-S----------------SSSEES-SSSHHHH-SSSHHHHHTEEEEEEEE
T ss_pred             CcccccceEEEEecCCCcEEEEEEEEcCC----------------CCCcccChhHHhhhccCCcccccceEEEEEEE
Confidence            4578999999999 479999999999994                569999999999997432   38999999987

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>TIGR00413 rlpA rare lipoprotein A

Probab=98.65  E-value=2.3e-07  Score=81.06  Aligned_cols=85  Identities=22%  Similarity=0.214  Sum_probs=67.9

Q ss_pred             eEEEEee--cCCCCCCCCCCCCCCCccCCCCcEEEeecccCCCCcCCCceEEEEe-CCCCEEEEEEEeCCCCCCCCCcCC
Q 040138          103 ARLTNND--FSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITA-NNGRSVLAQVVDECDSMRGCDEEH  179 (216)
Q Consensus       103 A~lT~y~--f~~g~dgGg~gACG~~~~~d~d~VVALSsg~f~~g~~CGk~I~It~-~NGkSV~atVVDeC~s~~GCd~~~  179 (216)
                      +.++||.  |.     |..+|.|.. +....|.+|-.+-      ..|..++|++ .|||+|+|+|.|++|...|     
T Consensus         1 G~ASwYg~~f~-----G~~TAnGe~-y~~~~~tAAHktL------PlgT~V~VtNl~ngrsviVrVnDRGPf~~g-----   63 (208)
T TIGR00413         1 GLASWYGPKFH-----GRKTANGEV-YNMKALTAAHKTL------PFNTYVKVTNLHNNRSVIVRINDRGPFSDD-----   63 (208)
T ss_pred             CEEeEeCCCCC-----CCcCCCCee-cCCCccccccccC------CCCCEEEEEECCCCCEEEEEEeCCCCCCCC-----
Confidence            3577885  33     778999975 4456788887765      4589999998 5999999999999986543     


Q ss_pred             CCCCCCCCCeeecCHHHHHHhccCCCccEEEEEE
Q 040138          180 AGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTW  213 (216)
Q Consensus       180 ~~~p~C~~n~lDLS~avF~aLg~~~~~G~i~VtW  213 (216)
                              .+||||++|+++|+. .+.|+.+|.-
T Consensus        64 --------RiIDLS~aAA~~Lg~-~~~G~a~V~v   88 (208)
T TIGR00413        64 --------RIIDLSHAAAREIGL-ISRGVGQVRI   88 (208)
T ss_pred             --------CEEECCHHHHHHcCC-CcCceEEEEE
Confidence                    799999999999994 7788877653

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=98.59  E-value=4.8e-07  Score=80.23  Aligned_cols=137  Identities=22%  Similarity=0.194  Sum_probs=90.2

Q ss_pred             cCccCCCCCCceeeccCCCCCCCCCCCCCCcee--cCCcccCeeecCCCccccceeEEEEeecCCCCCCCCCCCCCCCcc
Q 040138           50 NGKCNDDPDVGTHICKGGEGGGGGNCQPSGTLT--CQGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYH  127 (216)
Q Consensus        50 ~g~c~ddp~~~t~ic~~~~~~~~~~c~~~~~~~--c~g~~y~~~~cSPp~~~~t~A~lT~y~f~~g~dgGg~gACG~~~~  127 (216)
                      ..++.+.+.+..+.......+..+.=++.-...  =.|+.|....  -+..-...+.+.||.-   +=.|..+|=|+. +
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~y~~~~--~~~~~~~~G~ASwYg~---~fhgr~TA~Ge~-~  105 (233)
T COG0797          32 RSKYNFNEQVYGVKADPRDNPLKGSGRLTANKPYQVKGKSYYPKA--EPASFEQVGYASWYGE---KFHGRKTANGER-Y  105 (233)
T ss_pred             cccccCcccceecCCCccccccccccccccccceeeeeeEEEeee--ccccccccceeeeecc---ccCCccccCccc-c
Confidence            445666666655555433333210001111011  1577776665  3334446677888861   223778888864 5


Q ss_pred             CCCCcEEEeecccCCCCcCCCceEEEEe-CCCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCCc
Q 040138          128 DNSKPIAALSTGWYSGGSRCGKMIRITA-NNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEI  206 (216)
Q Consensus       128 ~d~d~VVALSsg~f~~g~~CGk~I~It~-~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~~  206 (216)
                      ....+.+|-.+-=|      +..++||+ .|||+|+|+|.|+.|...|             .+||||.+++++|+. ...
T Consensus       106 n~~~~tAAH~TLP~------~t~v~VtNl~NgrsvvVRINDRGPf~~g-------------RiIDlS~aAA~~l~~-~~~  165 (233)
T COG0797         106 DMNALTAAHKTLPL------PTYVRVTNLDNGRSVVVRINDRGPFVSG-------------RIIDLSKAAADKLGM-IRS  165 (233)
T ss_pred             cccccccccccCCC------CCEEEEEEccCCcEEEEEEeCCCCCCCC-------------cEeEcCHHHHHHhCC-ccC
Confidence            55788888877655      78999999 6999999999999987544             899999999999994 777


Q ss_pred             cEEEEE
Q 040138          207 GIVDVT  212 (216)
Q Consensus       207 G~i~Vt  212 (216)
                      |+.+|.
T Consensus       166 G~a~V~  171 (233)
T COG0797         166 GVAKVR  171 (233)
T ss_pred             ceEEEE
Confidence            777654

>PRK10672 rare lipoprotein A; Provisional

Probab=98.52  E-value=8.4e-07  Score=83.01  Aligned_cols=103  Identities=21%  Similarity=0.211  Sum_probs=78.5

Q ss_pred             CCcccCeeecCCCccccceeEEEEeecCCCCCCCCCCCCCCCccCCCCcEEEeecccCCCCcCCCceEEEEe-CCCCEEE
Q 040138           84 QGNSYPTYKCSPPVTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITA-NNGRSVL  162 (216)
Q Consensus        84 ~g~~y~~~~cSPp~~~~t~A~lT~y~f~~g~dgGg~gACG~~~~~d~d~VVALSsg~f~~g~~CGk~I~It~-~NGkSV~  162 (216)
                      .||.|...+ .| ..=+..+.++||.-.   -.|..+|-|.. ++...+.+|..+-=      -+..++||+ .|||+|+
T Consensus        64 ~G~~Y~~~~-~~-~~~~~~G~ASwYg~~---f~G~~TA~Ge~-~~~~~~tAAH~tLP------lps~vrVtNl~ngrsvv  131 (361)
T PRK10672         64 NGKSYKIVQ-DP-SNFSQAGLAAIYDAE---AGSNLTASGER-FDPNALTAAHPTLP------IPSYVRVTNLANGRMIV  131 (361)
T ss_pred             CCEEEEeCc-cC-CCcceEEEEEEeCCc---cCCCcCcCcee-ecCCcCeeeccCCC------CCCEEEEEECCCCcEEE
Confidence            689998764 22 223456888888632   23678999974 45568888887654      488999998 6999999


Q ss_pred             EEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCCccEEEEE
Q 040138          163 AQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVT  212 (216)
Q Consensus       163 atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~~G~i~Vt  212 (216)
                      |+|.|+.+...             ..+||||.+++++|+. ...+.|.|+
T Consensus       132 VrVnDRGP~~~-------------gRiiDLS~aAA~~Lg~-~~~~~V~ve  167 (361)
T PRK10672        132 VRINDRGPYGP-------------GRVIDLSRAAADRLNT-SNNTKVRID  167 (361)
T ss_pred             EEEeCCCCCCC-------------CCeeEcCHHHHHHhCC-CCCceEEEE
Confidence            99999998643             3799999999999996 556777766

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=97.92  E-value=3.8e-05  Score=66.53  Aligned_cols=73  Identities=19%  Similarity=0.344  Sum_probs=61.3

Q ss_pred             CCCCcEEEeecccCCC----CcCCCceEEEEeCCCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccC
Q 040138          128 DNSKPIAALSTGWYSG----GSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLD  203 (216)
Q Consensus       128 ~d~d~VVALSsg~f~~----g~~CGk~I~It~~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~  203 (216)
                      ..+.-|.||+....|-    ..+=|..++|+.+.|++ +|.|+|.-|             .=..+.+|||+.+|.++| +
T Consensus        53 ~sd~eITAlNPaqlNlGGipAAmAGaYLrVqGPKG~T-TVYVTDlYP-------------egasGaLDLSpNAFakIG-n  117 (232)
T COG4305          53 PSDMEITALNPAQLNLGGIPAAMAGAYLRVQGPKGKT-TVYVTDLYP-------------EGASGALDLSPNAFAKIG-N  117 (232)
T ss_pred             CCcceeeecCHHHcccCCchhhhccceEEEECCCCce-EEEEecccc-------------cccccccccChHHHhhhc-c
Confidence            4466789999888773    35789999999988864 688999975             335689999999999999 8


Q ss_pred             CCccEEEEEEEe
Q 040138          204 KEIGIVDVTWSM  215 (216)
Q Consensus       204 ~~~G~i~VtWs~  215 (216)
                      ..+|+|+|.|+.
T Consensus       118 m~qGrIpvqWrv  129 (232)
T COG4305         118 MKQGRIPVQWRV  129 (232)
T ss_pred             hhcCccceeEEE
Confidence            999999999974

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=97.80  E-value=7.7e-05  Score=60.34  Aligned_cols=65  Identities=28%  Similarity=0.450  Sum_probs=48.0

Q ss_pred             CcEEEeec--ccCCCCcCCCceEEEEeCCCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhcc--CCCc
Q 040138          131 KPIAALST--GWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGL--DKEI  206 (216)
Q Consensus       131 d~VVALSs--g~f~~g~~CGk~I~It~~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~--~~~~  206 (216)
                      -+|.+...  +|  +.+.||+|+++++ +||++.+..+|.=.                 ..+++|++||++|..  ..+.
T Consensus        43 p~IGg~~~V~gW--nS~~CGtC~~lty-~g~si~vlaID~a~-----------------~gfnis~~A~n~LT~g~a~~l  102 (119)
T PF07249_consen   43 PYIGGAPAVAGW--NSPNCGTCWKLTY-NGRSIYVLAIDHAG-----------------GGFNISLDAMNDLTNGQAVEL  102 (119)
T ss_dssp             TSEEEETT--ST--T-TTTT-EEEEEE-TTEEEEEEEEEE-S-----------------SSEEE-HHHHHHHHTS-CCCC
T ss_pred             CeeccccccccC--CCCCCCCeEEEEE-CCeEEEEEEEecCC-----------------CcccchHHHHHHhcCCcccce
Confidence            45666653  45  4578999999999 99999999999953                 579999999999964  3469


Q ss_pred             cEEEEEEEe
Q 040138          207 GIVDVTWSM  215 (216)
Q Consensus       207 G~i~VtWs~  215 (216)
                      |+|+++|+.
T Consensus       103 G~V~a~~~q  111 (119)
T PF07249_consen  103 GRVDATYTQ  111 (119)
T ss_dssp             -EEE-EEEE
T ss_pred             eEEEEEEEE
Confidence            999999863

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>PF07127 Nodulin_late: Late nodulin protein; InterPro: IPR009810 This family consists of several plant specific late nodulin sequences which are homologous to the Pisum sativum (Garden pea) ENOD3 protein

Probab=94.48  E-value=0.062  Score=37.29  Aligned_cols=36  Identities=22%  Similarity=0.308  Sum_probs=25.1

Q ss_pred             cchhHHHHHHHHHhhhhhhhhhC-CCCCCCcCCCCCc
Q 040138           10 SLSLLTFFCTISLPLYSNAISQC-NGPCGTLDDCDGQ   45 (216)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~c-~~~c~~~~dc~g~   45 (216)
                      .+-+.++.+.|||++++.+...= ..+|++..||+..
T Consensus         3 ~ilKFvY~mIiflslflv~~~~~~~~~C~~d~DCp~~   39 (54)
T PF07127_consen    3 KILKFVYAMIIFLSLFLVVTNVDAIIPCKTDSDCPKD   39 (54)
T ss_pred             cchhhHHHHHHHHHHHHhhcccCCCcccCccccCCCC
Confidence            44567777777776444444443 5899999999976

ENOD3 is expressed in the late stages of root nodule formation and contains two pairs of cysteine residues toward the proteins C terminus which may be involved in metal-binding [].; GO: 0046872 metal ion binding, 0009878 nodule morphogenesis

>PF02977 CarbpepA_inh: Carboxypeptidase A inhibitor; InterPro: IPR004231 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively

Probab=86.34  E-value=0.27  Score=33.93  Aligned_cols=23  Identities=43%  Similarity=0.953  Sum_probs=16.6

Q ss_pred             hhhhhhCCCCCCCcCCCCCceEE
Q 040138           26 SNAISQCNGPCGTLDDCDGQLIC   48 (216)
Q Consensus        26 ~~~~~~c~~~c~~~~dc~g~l~c   48 (216)
                      +|...=||++|.+++||.|.-.|
T Consensus         2 ~~~~~tCn~~C~t~sDC~g~tlC   24 (46)
T PF02977_consen    2 SNILGTCNKYCNTNSDCSGITLC   24 (46)
T ss_dssp             --S-TTTT-B-SSSCCCTTSSSS
T ss_pred             cccccccCCccccCccccceeeh
Confidence            35566799999999999999988

In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. This family is represented by the well-characterised metallocarboxypeptidase A inhibitor (MCPI) from potatoes, which belongs to the MEROPS inhibitor family I37, clan IE. It inhibits metallopeptidases belonging to MEROPS peptidase family M14, carboxypeptidase A. In Russet Burbank potatoes, it is a mixture of approximately equal amounts of two polypeptide chains containing 38 or 39 amino acid residues. The chains differ in their amino terminal sequence only [] and are resistant to fragmentation by proteases []. The structure of the complex between bovine carboxypeptidase A and the 39-amino-acid carboxypeptidase A inhibitor from potatoes has been determined at 2.5-A resolution []. The potato inhibitor is synthesised as a precursor, having a 29 residue N-terminal signal peptide, a 27 residue pro-peptide, the 39 residue mature inhibitor region and a 7 residue C-terminal extension. The 7 residue C-terminal extension is involved in inhibitor inactivation and may be required for targeting to the vacuole where the mature active inhibitor accumulates []. The N-terminal region and the mature inhibitor are weakly related to other solananaceous proteins found in this entry, from potato, tomato and henbane, which have been incorrectly described as metallocarboxipeptidase inhibitors [].; GO: 0008191 metalloendopeptidase inhibitor activity; PDB: 4CPA_I 1H20_A 2HLG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	216
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	6e-10

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 56.0 bits (135), Expect = 6e-10
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 21/108 (19%)

Query: 110 FSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSR----CGKMIRITANNGRSVLAQV 165
           ++  G  GG          +   I A++    + G       G  + +    G      V
Sbjct: 13  YTGSGYSGGA--FLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEGPKG-KTTVYV 69

Query: 166 VDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTW 213
            D               P      +D S   +  +G + + G +++ W
Sbjct: 70  TDLY-------------PEGARGALDLSPNAFRKIG-NMKDGKINIKW 103

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	216
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	99.85
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	99.75
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	99.71
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.63
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.54
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.46
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	97.64
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	97.61
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	97.46
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.35
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	97.25
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	97.24
4cpa_I	38	Metallocarboxypeptidase inhibitor; hydrolase (C-te	94.96
1oig_A	26	Dumpy, CG33196-PB; structural protein; NMR {Drosop	91.26
1ixt_A	27	Spasmodic protein TX9A-like protein; conotoxin, P-	85.69

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=99.85  E-value=3.3e-21  Score=164.63  Aligned_cols=99  Identities=12%  Similarity=0.124  Sum_probs=84.2

Q ss_pred             ccccceeEEEEeecCCCCCCCCCCCCCCCccCCCCcEEEeecccCCCC----cCCCceEEEEeCCCCEEEEEEEeCCCCC
Q 040138           97 VTSSTQARLTNNDFSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGG----SRCGKMIRITANNGRSVLAQVVDECDSM  172 (216)
Q Consensus        97 ~~~~t~A~lT~y~f~~g~dgGg~gACG~~~~~d~d~VVALSsg~f~~g----~~CGk~I~It~~NGkSV~atVVDeC~s~  172 (216)
                      ......+++|||.-+     ...||||......++++||||+.+|+++    ..||++|+|++ ++++|+|+|+|+||  
T Consensus         3 ~~~~~~G~aT~Y~~g-----~~~GACG~~~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~-~~gsv~V~v~D~CP--   74 (208)
T 3d30_A            3 YDDLHEGYATYTGSG-----YSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEG-PKGKTTVYVTDLYP--   74 (208)
T ss_dssp             TTCCEEEEEEECSTT-----SSSCTTCCCCCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEE-TTEEEEEEEEEECT--
T ss_pred             CCCcEEEEEEEcCCC-----CCCCcCCCCCCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEe-CCCcEEEEEEECCC--
Confidence            345567999999532     3468999633345799999999999987    79999999999 56699999999995  


Q ss_pred             CCCCcCCCCCCCCCCCeeecCHHHHHHhccCCCccEEEEEEEe
Q 040138          173 RGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSM  215 (216)
Q Consensus       173 ~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~~G~i~VtWs~  215 (216)
                                 +|+.+|||||++||++|+ +++.|+++|+|++
T Consensus        75 -----------~C~~~~~DLS~~aF~~la-~~~~G~i~v~~~~  105 (208)
T 3d30_A           75 -----------EGARGALDLSPNAFRKIG-NMKDGKINIKWRV  105 (208)
T ss_dssp             -----------TCCTTCEEECHHHHHHHS-CGGGSSEEEEEEE
T ss_pred             -----------CCCCCeEECCHHHHHHhc-ccCCCEEEEEEEE
Confidence                       688899999999999999 6899999999986

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=99.75  E-value=3.3e-18  Score=149.82  Aligned_cols=103  Identities=21%  Similarity=0.267  Sum_probs=83.5

Q ss_pred             cceeEEEEeecCCCCCCC--CCCCCCCCcc---CCCCcEEEeecccCCCCcCCCceEEEEeC-----CCCEEEEEEEeCC
Q 040138          100 STQARLTNNDFSEGGDGG--GPSECDGQYH---DNSKPIAALSTGWYSGGSRCGKMIRITAN-----NGRSVLAQVVDEC  169 (216)
Q Consensus       100 ~t~A~lT~y~f~~g~dgG--g~gACG~~~~---~d~d~VVALSsg~f~~g~~CGk~I~It~~-----NGkSV~atVVDeC  169 (216)
                      -..|++|||.-..+. |.  ..||||+...   ..+.++||||+.+|+++..||++++|++.     .+++|+|+|+|+|
T Consensus        19 w~~g~AT~Yg~~~~~-gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~~sv~V~VtD~C   97 (245)
T 2hcz_X           19 WLTARATWYGQPNGA-GAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN   97 (245)
T ss_dssp             CEEEEEEECSCTTSC-SSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCSSCEEEEEEEEC
T ss_pred             eeeeEEEEeCCCCCC-CcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCCCCEEEEEEecc
Confidence            467999999754321 11  3599997431   24789999999999999999999999994     2789999999999


Q ss_pred             CCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccC------CCccEEEEEEEe
Q 040138          170 DSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLD------KEIGIVDVTWSM  215 (216)
Q Consensus       170 ~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~------~~~G~i~VtWs~  215 (216)
                      +    |        ++..+|||||+.||++|+.+      ++.|+|+|+|++
T Consensus        98 ~----C--------~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrr  137 (245)
T 2hcz_X           98 Y----E--------PIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRR  137 (245)
T ss_dssp             C----C--------TTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEE
T ss_pred             C----C--------CCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEE
Confidence            4    2        22679999999999999954      789999999985

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=99.71  E-value=1.3e-17  Score=145.80  Aligned_cols=103  Identities=17%  Similarity=0.245  Sum_probs=79.9

Q ss_pred             cceeEEEEeecCCCCCCC--CCCCCCCCc---cCCCCcEEEeecccCCCCcCCCceEEEEeCC-----CCEEEEEEEeCC
Q 040138          100 STQARLTNNDFSEGGDGG--GPSECDGQY---HDNSKPIAALSTGWYSGGSRCGKMIRITANN-----GRSVLAQVVDEC  169 (216)
Q Consensus       100 ~t~A~lT~y~f~~g~dgG--g~gACG~~~---~~d~d~VVALSsg~f~~g~~CGk~I~It~~N-----GkSV~atVVDeC  169 (216)
                      -..|++|||.-..+. |.  ..||||+..   ...+.++||||+.+|+++..||++++|++.+     +++|+|+|+|+|
T Consensus        19 w~~g~AT~Yg~~~~~-gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~~v~V~VtD~C   97 (241)
T 1n10_A           19 WLDAKSTWYGKPTGA-GPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHITDDN   97 (241)
T ss_dssp             CEEEEEEEEC-----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEEEEEC
T ss_pred             ceeeEEEEeCCCCCC-CcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCCCEEEEEeEec
Confidence            468999999754321 11  469999743   1346799999999999999999999999942     789999999999


Q ss_pred             CCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccC------CCccEEEEEEEe
Q 040138          170 DSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLD------KEIGIVDVTWSM  215 (216)
Q Consensus       170 ~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~------~~~G~i~VtWs~  215 (216)
                      .    |+.        ..+|||||+.||++|+.+      ++.|+|+|+|+.
T Consensus        98 ~----C~~--------~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrr  137 (241)
T 1n10_A           98 E----EPI--------APYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRR  137 (241)
T ss_dssp             S----SCS--------SSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEE
T ss_pred             C----CCC--------CCcceecCHHHHHHhhccCcccccccCCEEEEEEEE
Confidence            3    211        458999999999999943      689999999975

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.63  E-value=7.5e-17  Score=129.32  Aligned_cols=99  Identities=23%  Similarity=0.456  Sum_probs=77.0

Q ss_pred             ccceeEEEEeecCCCCCC------CCCCCCCCCccCCCCcEEEeecccC---------CCCcCCCceEEEEeC-CCCEEE
Q 040138           99 SSTQARLTNNDFSEGGDG------GGPSECDGQYHDNSKPIAALSTGWY---------SGGSRCGKMIRITAN-NGRSVL  162 (216)
Q Consensus        99 ~~t~A~lT~y~f~~g~dg------Gg~gACG~~~~~d~d~VVALSsg~f---------~~g~~CGk~I~It~~-NGkSV~  162 (216)
                      +....++||+-|....-+      ...++|+. +. .+..+++++..+|         +++..||++|+|++. |||+|+
T Consensus         2 ~~~~~~~ty~~y~~~~~~~~~~~~~~s~~C~t-~d-a~~~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~nGksV~   79 (125)
T 1bw3_A            2 QANDVRATYHYYRPAQNNWDLGAPAVSAYCAT-WD-ASKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPATGAQIT   79 (125)
T ss_dssp             EEEEEEEECCCSSCGGGTTCTTSTTTCCTTHH-HH-TTSCHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETTTTEEEE
T ss_pred             CccceEEEEEEecCCCcCcccccceeeEeeec-cc-CCCceeEecCCCceEeccCCCCCCCcccCCEEEeEeCCCCCEEE
Confidence            456789999888643322      14588984 33 4455777776666         567899999999985 699999


Q ss_pred             EEEEeCCCCCCCCCcCCCCCCCCCCCeeecC-HHHHHHhccC---CCccEEEEEEEe
Q 040138          163 AQVVDECDSMRGCDEEHAGQPPCDNNIVDGS-DAVWSALGLD---KEIGIVDVTWSM  215 (216)
Q Consensus       163 atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS-~avF~aLg~~---~~~G~i~VtWs~  215 (216)
                      |+|||+|+             +|   .|||| ++||++|+.+   ++.|+++|+|+|
T Consensus        80 V~VvD~CP-------------~g---gLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~  120 (125)
T 1bw3_A           80 ARIVDQCA-------------NG---GLDLDWDTVFTKIDTNGIGYQQGHLNVNYQF  120 (125)
T ss_dssp             EEEEECCS-------------SS---SCCSCSSSSHHHHCSSCHHHHHSEEEEEEEE
T ss_pred             EEEEEeCC-------------CC---CCCCCCHHHHHHHhccCCcccCcEEEEEEEE
Confidence            99999996             33   49999 9999999932   579999999987

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.54  E-value=6.3e-14  Score=107.68  Aligned_cols=88  Identities=22%  Similarity=0.196  Sum_probs=75.3

Q ss_pred             eeEEEEee--cCCCCCCCCCCCCCCCccCCCCcEEEeecccCCCCcCCCceEEEEe-CCCCEEEEEEEeCCCCCCCCCcC
Q 040138          102 QARLTNND--FSEGGDGGGPSECDGQYHDNSKPIAALSTGWYSGGSRCGKMIRITA-NNGRSVLAQVVDECDSMRGCDEE  178 (216)
Q Consensus       102 ~A~lT~y~--f~~g~dgGg~gACG~~~~~d~d~VVALSsg~f~~g~~CGk~I~It~-~NGkSV~atVVDeC~s~~GCd~~  178 (216)
                      .+.++||.  |.     |..+|+|. .++..++.+|..+-      .||..++||+ .|||+|+|+|.|+||.       
T Consensus         3 ~G~ASwYg~~f~-----G~~TA~Ge-~~~~~~~tAAH~tl------P~gt~vrVtNl~nGksVvVrVnDRGP~-------   63 (95)
T 4avr_A            3 TGEASYYGSRHA-----GLRTASGE-RYNPNAMTAAHRTL------PFGARVRVTNLDNRRSVVVRINDRGPF-------   63 (95)
T ss_dssp             EEEEEECCGGGT-----TSBCTTSC-BCCTTSCEEECSSS------CTTCEEEEEETTTCCEEEEEEEECCCC-------
T ss_pred             EEEEEEECCccC-----CCCCCCcc-CcCCCCCEEEcCCC------CCCcEEEEEECCCCcEEEEEEccCCCC-------
Confidence            36788886  34     77999996 56678899999863      6899999998 5999999999999974       


Q ss_pred             CCCCCCCCCCeeecCHHHHHHhccCCCccEEEEEEEe
Q 040138          179 HAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSM  215 (216)
Q Consensus       179 ~~~~p~C~~n~lDLS~avF~aLg~~~~~G~i~VtWs~  215 (216)
                            +...+||||++||++|+ ..+.|+.+|+|+.
T Consensus        64 ------~~griIDLS~aAa~~Lg-~~~~G~~~V~ve~   93 (95)
T 4avr_A           64 ------RRGRIIDVSRKAAEGLG-MIRSGVAPVRIES   93 (95)
T ss_dssp             ------STTEEEEECHHHHHHHT-CTTTSCEEEEEEE
T ss_pred             ------CCCCEEEeCHHHHHHhC-CcCCCEEEEEEEE
Confidence                  56689999999999999 5889999999974

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.46  E-value=7.6e-14  Score=117.84  Aligned_cols=104  Identities=19%  Similarity=0.326  Sum_probs=80.6

Q ss_pred             cccceeEEEEeecCCCCCCCCCCCCCCCc------c--CCCCcEEEeecccCCCC------cCCCceEEEEe--------
Q 040138           98 TSSTQARLTNNDFSEGGDGGGPSECDGQY------H--DNSKPIAALSTGWYSGG------SRCGKMIRITA--------  155 (216)
Q Consensus        98 ~~~t~A~lT~y~f~~g~dgGg~gACG~~~------~--~d~d~VVALSsg~f~~g------~~CGk~I~It~--------  155 (216)
                      .....|++|||.-      +..||||+..      +  ..+.+++|||+.+|+++      ..||++++|++        
T Consensus        12 ~g~~~A~aT~Yg~------~~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~c   85 (181)
T 1wc2_A           12 NGKSCASTTNYHD------SHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQ   85 (181)
T ss_dssp             TTEEEEEEEEECC------CBCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTS
T ss_pred             CCccccceeEecC------CCCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccc
Confidence            4567899999952      2468999761      1  23678999999999986      89999999995        


Q ss_pred             ----CCCCEEEEEEEeCCCCCCCCCcCCCCCCCCC-------------CCeeecCHHHHHHhccCCCccEEEEEEEe
Q 040138          156 ----NNGRSVLAQVVDECDSMRGCDEEHAGQPPCD-------------NNIVDGSDAVWSALGLDKEIGIVDVTWSM  215 (216)
Q Consensus       156 ----~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~-------------~n~lDLS~avF~aLg~~~~~G~i~VtWs~  215 (216)
                          ..|++|+|||+|.||...    +.+.|  |.             ..|||||+.+ .+|+ ....|+++|+|+.
T Consensus        86 g~~~~~g~SI~VtaTN~CPpn~----~nggW--Cn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia-~~~~GivpV~yrr  154 (181)
T 1wc2_A           86 GGPVREGLSKTFMITNLCPNIY----PNQDW--CNQGSQYGGHNKYGYELHLDLENGR-SQVT-GMGWNNPETTWEV  154 (181)
T ss_dssp             CCCCCTTCEEEEEEEEEECSST----TSTTT--SCCSSSSSCCCTTSCSEEEEEECTT-STTG-GGTCSSEEEEEEE
T ss_pred             cccCCCCCeEEEEEecCCCCCC----CCCCc--cCCCcccCcccccCccccccccchH-HHhh-hhcCCCceeEEEE
Confidence                147899999999999532    22333  31             4799999999 7888 4788999999973

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=97.64  E-value=7.9e-05  Score=59.25  Aligned_cols=65  Identities=20%  Similarity=0.345  Sum_probs=52.2

Q ss_pred             CcEEEeec--ccCCCCcCCCceEEEEeCCCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCC--c
Q 040138          131 KPIAALST--GWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKE--I  206 (216)
Q Consensus       131 d~VVALSs--g~f~~g~~CGk~I~It~~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~--~  206 (216)
                      -+|.+...  +|  +.+.||+|++|++ +||+|.+..+|.=.                 ..+++|++||++|.....  .
T Consensus        44 P~IGg~~~i~gw--ns~~CGtC~~lty-~g~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G~a~~l  103 (120)
T 3m3g_A           44 PYIGGAAAVAGW--NSASCGTCWKLQY-SGHTIYVLAVDHAA-----------------SGFNIALDAMNALTGGQAVQL  103 (120)
T ss_dssp             TSEEEETTCCST--TCTTTTCEEEEEE-TTEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCHHHH
T ss_pred             CccccccccccC--CCCCCCceEEEEE-CCeEEEEEEEecCC-----------------CceeecHHHHHHhhCCcceee
Confidence            35665543  33  4689999999999 99999999999963                 579999999999974443  5


Q ss_pred             cEEEEEEEe
Q 040138          207 GIVDVTWSM  215 (216)
Q Consensus       207 G~i~VtWs~  215 (216)
                      |+|+++|..
T Consensus       104 G~V~a~~~~  112 (120)
T 3m3g_A          104 GRVSATATQ  112 (120)
T ss_dssp             CEEECEEEE
T ss_pred             eeEeEEEEE
Confidence            999999863

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=97.61  E-value=0.00011  Score=59.16  Aligned_cols=67  Identities=19%  Similarity=0.310  Sum_probs=55.1

Q ss_pred             CcEEEeecc-cCCCCcCCCceEEEEeCCCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCCccEE
Q 040138          131 KPIAALSTG-WYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKEIGIV  209 (216)
Q Consensus       131 d~VVALSsg-~f~~g~~CGk~I~It~~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~~G~i  209 (216)
                      .+|.+...- -|+ .+.||+|++|+++|||+|.++.+|.=.                 ..+++++.+|++|......|+|
T Consensus        50 P~IGga~~iagWN-S~~CGtC~~lty~ng~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G~~lG~V  111 (129)
T 2kqa_A           50 PNVGGIPDIAGWD-SPSCGTCWKVTIPNGNSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGSTEAGRV  111 (129)
T ss_dssp             SSEEEETTCCSTT-CTTCSCEEEEEETTTEEEEEEEEEECS-----------------SSEEECHHHHHHHHSSSSSCCB
T ss_pred             CeeccchhhccCC-CCCCCceEEEEEcCCCEEEEEEEccCC-----------------CceeehHHHHHHhcCCcccCcE
Confidence            456666533 244 799999999999889999999999963                 5799999999999755779999


Q ss_pred             -EEEEEe
Q 040138          210 -DVTWSM  215 (216)
Q Consensus       210 -~VtWs~  215 (216)
                       +++|+.
T Consensus       112 ~~a~~~q  118 (129)
T 2kqa_A          112 DNVNYVQ  118 (129)
T ss_dssp             CSCEEEE
T ss_pred             eEEEEEE
Confidence             888864

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=97.46  E-value=0.00024  Score=56.57  Aligned_cols=64  Identities=23%  Similarity=0.355  Sum_probs=50.6

Q ss_pred             EEEeec-ccCCCCcCCCceEEEEeCC--CCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCCC--cc
Q 040138          133 IAALST-GWYSGGSRCGKMIRITANN--GRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDKE--IG  207 (216)
Q Consensus       133 VVALSs-g~f~~g~~CGk~I~It~~N--GkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~~--~G  207 (216)
                      |.+... .-|+ .+.||+|++|++ +  ||+|.+..+|.=.                 ..++++..+|++|.....  .|
T Consensus        46 IGg~~~V~gwn-S~~CGtC~~lty-~~~g~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~a~~lG  106 (122)
T 3sul_A           46 VGAVDTITGWN-SESCGTCYQITW-SGTGKTIHVVGVDVAG-----------------NGFNVGQRAMDDLTNGQAVALG  106 (122)
T ss_dssp             EEEETTCCSTT-CTTTTCEEEEEE-TTTTEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCHHHHS
T ss_pred             cccccccccCC-CCCCCceEEEEE-cCCCcEEEEEEEecCC-----------------CceeehHHHHHHhcCCcceecc
Confidence            544443 2244 499999999999 7  9999999999964                 469999999999984333  69


Q ss_pred             EEEEEEEe
Q 040138          208 IVDVTWSM  215 (216)
Q Consensus       208 ~i~VtWs~  215 (216)
                      +|+++|+.
T Consensus       107 ~V~a~~~q  114 (122)
T 3sul_A          107 NIDVTATL  114 (122)
T ss_dssp             EEEEEEEE
T ss_pred             eEeEEEEE
Confidence            99999863

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.35  E-value=0.00049  Score=55.75  Aligned_cols=63  Identities=16%  Similarity=0.257  Sum_probs=51.8

Q ss_pred             CcEEEeecccCCCCcCCCceEEEEeCCCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCe--eecCHHHHHHhccCC----
Q 040138          131 KPIAALSTGWYSGGSRCGKMIRITANNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNI--VDGSDAVWSALGLDK----  204 (216)
Q Consensus       131 d~VVALSsg~f~~g~~CGk~I~It~~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~--lDLS~avF~aLg~~~----  204 (216)
                      -+|.|..   | +...||.|++|++ +||+|.+..+|.=.                 ..  +++|..||+.|....    
T Consensus        48 P~igg~~---w-ns~~CGtCwkLtY-~G~sI~vlaID~a~-----------------~g~~FnIs~~Amn~LT~G~~a~~  105 (136)
T 3sum_A           48 PHFVAAP---E-AQTECGSCWKLRY-KGNHAFVTVVDRVE-----------------EANLFVGGTDLVKNLTTFNGAPE  105 (136)
T ss_dssp             TSEEECC---B-TTBCTTCEEEEEE-TTEEEEEEEEECCC-----------------STTEEEECHHHHHHHTCBTTBCH
T ss_pred             Ccccccc---c-CCCCCCceEEEEE-CCeEEEEEEEecCC-----------------CcceEeehHHHHHHHhCCCcccc
Confidence            4677776   4 4689999999999 99999999999963                 34  999999999998433    


Q ss_pred             --CccEEEE-EEEe
Q 040138          205 --EIGIVDV-TWSM  215 (216)
Q Consensus       205 --~~G~i~V-tWs~  215 (216)
                        +.|+|++ +|+.
T Consensus       106 a~elG~Vda~~~~q  119 (136)
T 3sum_A          106 GYDWGTAQLFSAYQ  119 (136)
T ss_dssp             HHHHSEEECSEEEE
T ss_pred             ceecceeeeeEEEE
Confidence              3699998 8863

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.25  E-value=0.00039  Score=55.56  Aligned_cols=65  Identities=25%  Similarity=0.323  Sum_probs=51.8

Q ss_pred             CcEEEee--cccCCCCcCCCceEEEEeCCC----CEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccCC
Q 040138          131 KPIAALS--TGWYSGGSRCGKMIRITANNG----RSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLDK  204 (216)
Q Consensus       131 d~VVALS--sg~f~~g~~CGk~I~It~~NG----kSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~~  204 (216)
                      -+|.+..  ++|  +.+.||.|++|++ +|    |+|.+..+|.=.                 ..+++|++||++|....
T Consensus        45 P~IGg~~~i~gw--nS~~CGtC~~lty-~g~~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~  104 (125)
T 3suk_A           45 PHIGASSDIGGF--NSPACGNCYTISF-TFQGVTRSINLVAIDHAG-----------------NGFNVAQAAMDELTNGN  104 (125)
T ss_dssp             TSEEEETTCCST--TCTTTTCEEEEEE-EETTEEEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSC
T ss_pred             CeeccccccccC--CCCCCCeeEEEEE-cCCCcceEEEEEEEecCC-----------------CceeecHHHHHHhcCCc
Confidence            4566655  333  3689999999999 88    999999999963                 46999999999997433


Q ss_pred             --CccEEEEEEEe
Q 040138          205 --EIGIVDVTWSM  215 (216)
Q Consensus       205 --~~G~i~VtWs~  215 (216)
                        ..|+|+++|..
T Consensus       105 a~~lG~V~~~~~~  117 (125)
T 3suk_A          105 AVALGTIDVQSQQ  117 (125)
T ss_dssp             HHHHCEEEEEEEE
T ss_pred             ccccceEeEEEEE
Confidence              36999999863

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.24  E-value=0.00044  Score=55.43  Aligned_cols=65  Identities=20%  Similarity=0.340  Sum_probs=51.5

Q ss_pred             CcEEEee--cccCCCCcCCCceEEEEeCCC-----CEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecCHHHHHHhccC
Q 040138          131 KPIAALS--TGWYSGGSRCGKMIRITANNG-----RSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLD  203 (216)
Q Consensus       131 d~VVALS--sg~f~~g~~CGk~I~It~~NG-----kSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~  203 (216)
                      -+|.+..  ++|  +.+.||.|++|++ +|     |+|.+..+|.=.                 ..+++|++||+.|...
T Consensus        44 P~IGg~~~i~gw--ns~~CGtC~~lty-~g~~~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~g  103 (127)
T 3suj_A           44 PCIGGSSDIAGY--NSPNCGSCYQLTY-SSAHTTPKSIYMVAIDRSA-----------------EGFTASKQAMDDLTNK  103 (127)
T ss_dssp             TSEEEETTCCST--TCTTTTCEEEEEE-CCSSSCCEEEEEEEEEECS-----------------SSEEECHHHHHHHHTS
T ss_pred             CeeccccccccC--CCCCCCceEEEEE-CCCCCcceEEEEEEEecCC-----------------CceeecHHHHHHhcCC
Confidence            4565554  333  4689999999999 77     999999999964                 4699999999999743


Q ss_pred             CC--ccEEEEEEEe
Q 040138          204 KE--IGIVDVTWSM  215 (216)
Q Consensus       204 ~~--~G~i~VtWs~  215 (216)
                      ..  .|+|+++|+.
T Consensus       104 ~a~~lG~V~~~~~~  117 (127)
T 3suj_A          104 RAEELGTVNVDVRK  117 (127)
T ss_dssp             CHHHHSSEEEEEEE
T ss_pred             ccccceeEEEEEEE
Confidence            33  6999999863

>4cpa_I Metallocarboxypeptidase inhibitor; hydrolase (C-terminal peptidase); 2.50A {Solanum tuberosum} SCOP: g.3.2.1 PDB: 1h20_A

Probab=94.96  E-value=0.0064  Score=38.97  Aligned_cols=20  Identities=50%  Similarity=1.149  Sum_probs=17.6

Q ss_pred             hhCCCCCCCcCCCCCceEEe
Q 040138           30 SQCNGPCGTLDDCDGQLICI   49 (216)
Q Consensus        30 ~~c~~~c~~~~dc~g~l~c~   49 (216)
                      --|++||+|.+||.|+-.|.
T Consensus         6 ~~C~KPC~T~DDCS~gw~Cq   25 (38)
T 4cpa_I            6 PICNKPCKTHDDCSGAWFCQ   25 (38)
T ss_dssp             TTTTCBCSSSSSSCCCSSCC
T ss_pred             cccCCCccCccccccchHHH
Confidence            35999999999999998883

>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1

Probab=91.26  E-value=0.09  Score=31.41  Aligned_cols=21  Identities=38%  Similarity=0.876  Sum_probs=19.1

Q ss_pred             CCCCcCCCCCceEEecCccCC
Q 040138           35 PCGTLDDCDGQLICINGKCND   55 (216)
Q Consensus        35 ~c~~~~dc~g~l~c~~g~c~d   55 (216)
                      -|-...||+.++.|+|.||-|
T Consensus         3 EC~~~sdCp~~~aC~n~kC~d   23 (26)
T 1oig_A            3 ECVLNSDCPSNQACVNQKCRD   23 (26)
T ss_dssp             SCCSSTTSSTTCEECSSSEEC
T ss_pred             cccccCcCCcCHhhhcCcccC
Confidence            478899999999999999976

>1ixt_A Spasmodic protein TX9A-like protein; conotoxin, P-superfamily, ICK, inhibitory cystine knot, conus gloriamaris, GM9A, GM9.1; NMR {Synthetic} SCOP: g.3.6.1

Probab=85.69  E-value=0.52  Score=27.98  Aligned_cols=24  Identities=33%  Similarity=0.895  Sum_probs=22.0

Q ss_pred             hCCCCCCCcCCCCCceEEecCccC
Q 040138           31 QCNGPCGTLDDCDGQLICINGKCN   54 (216)
Q Consensus        31 ~c~~~c~~~~dc~g~l~c~~g~c~   54 (216)
                      +||.+|+.+.||...-||...+|.
T Consensus         1 ~cnnscq~hs~c~shcic~~~~c~   24 (27)
T 1ixt_A            1 SCNNSCQSHSDCASHCICTFRGCG   24 (27)
T ss_dssp             CCCBCCSSSSCSSSSEEEETTEEE
T ss_pred             CccchhhhhhhHhhceeeeecccc
Confidence            699999999999999999888774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	216
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	99.76
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.52
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.47
d4cpai_	37	Carboxypeptidase A inhibitor {Potato [TaxId: 4113]	95.01
d1ixta_	27	Conotoxin {Conus gloriamaris, Tx IXa [TaxId: 37336	85.68

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.76  E-value=9.8e-19  Score=140.20  Aligned_cols=104  Identities=17%  Similarity=0.262  Sum_probs=80.3

Q ss_pred             cceeEEEEeecCCCCCC-CCCCCCCCCc---cCCCCcEEEeecccCCCCcCCCceEEEEeCC-----CCEEEEEEEeCCC
Q 040138          100 STQARLTNNDFSEGGDG-GGPSECDGQY---HDNSKPIAALSTGWYSGGSRCGKMIRITANN-----GRSVLAQVVDECD  170 (216)
Q Consensus       100 ~t~A~lT~y~f~~g~dg-Gg~gACG~~~---~~d~d~VVALSsg~f~~g~~CGk~I~It~~N-----GkSV~atVVDeC~  170 (216)
                      -..|++|||.-.++.+. .+.||||+..   ...+.++||||+.+|+++..||++++|++++     +++|+|+|+|.|+
T Consensus        17 w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~~~~c~~~sv~V~vtd~c~   96 (143)
T d1n10a2          17 WLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHITDDNE   96 (143)
T ss_dssp             CEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEEEEECS
T ss_pred             cEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCCCCcccCCCEEEEEEeccc
Confidence            47799999975433321 2369999642   2346899999999999999999999999953     6899999999996


Q ss_pred             CCCCCCcCCCCCCCCCCCeeecCHHHHHHhccC------CCccEEEEEEEe
Q 040138          171 SMRGCDEEHAGQPPCDNNIVDGSDAVWSALGLD------KEIGIVDVTWSM  215 (216)
Q Consensus       171 s~~GCd~~~~~~p~C~~n~lDLS~avF~aLg~~------~~~G~i~VtWs~  215 (216)
                                  ++|..+|||||+.+|++|+.+      .+.|+|+|+|+-
T Consensus        97 ------------~~~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRr  135 (143)
T d1n10a2          97 ------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRR  135 (143)
T ss_dssp             ------------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEE
T ss_pred             ------------CCCCCccccCCHHHHhhhccccchhhheecCccceEEEE
Confidence                        356678999999999999943      257999999973

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.52  E-value=4.4e-15  Score=123.41  Aligned_cols=109  Identities=18%  Similarity=0.259  Sum_probs=79.6

Q ss_pred             ccceeEEEEeecCCCCCCCCCCCCCCCccC--------CCCcEEEeecccCCC------CcCCCceEEEEeC--------
Q 040138           99 SSTQARLTNNDFSEGGDGGGPSECDGQYHD--------NSKPIAALSTGWYSG------GSRCGKMIRITAN--------  156 (216)
Q Consensus        99 ~~t~A~lT~y~f~~g~dgGg~gACG~~~~~--------d~d~VVALSsg~f~~------g~~CGk~I~It~~--------  156 (216)
                      ....|++|||.-      +..||||+....        .+.+++|||+.+|++      +..||++++|++.        
T Consensus        13 g~~~A~aT~Ygd------~~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~   86 (180)
T d1wc2a1          13 GKSCASTTNYHD------SHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (180)
T ss_dssp             TEEEEEEEEECC------CBCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CccccceEEeCC------CCCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccC
Confidence            457799999951      234899975321        246899999999998      7899999999851        


Q ss_pred             ----CCCEEEEEEEeCCCCCC----CCCcC---CCCCCCCCCCeeecCHHHHHHhccCCCccEEEEEEEe
Q 040138          157 ----NGRSVLAQVVDECDSMR----GCDEE---HAGQPPCDNNIVDGSDAVWSALGLDKEIGIVDVTWSM  215 (216)
Q Consensus       157 ----NGkSV~atVVDeC~s~~----GCd~~---~~~~p~C~~n~lDLS~avF~aLg~~~~~G~i~VtWs~  215 (216)
                          .|+||+|||||+||.+.    .|...   ..-++-....|||||+ +|.+|+ ....|+|+|+|+.
T Consensus        87 ~~~~~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs~-af~~ia-~~~~G~v~V~yrr  154 (180)
T d1wc2a1          87 GPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLEN-GRSQVT-GMGWNNPETTWEV  154 (180)
T ss_dssp             CCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEEC-TTSTTG-GGTCSSEEEEEEE
T ss_pred             CCCCCCCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceechH-HHHHHh-hhcCCcceeEEEE
Confidence                47899999999998532    22110   0011123345999985 888898 6889999999973

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.47  E-value=8.1e-08  Score=74.27  Aligned_cols=57  Identities=30%  Similarity=0.655  Sum_probs=47.5

Q ss_pred             CCcCCCceEEEEe-CCCCEEEEEEEeCCCCCCCCCcCCCCCCCCCCCeeecC-HHHHHHhccCC---CccEEEEEEEe
Q 040138          143 GGSRCGKMIRITA-NNGRSVLAQVVDECDSMRGCDEEHAGQPPCDNNIVDGS-DAVWSALGLDK---EIGIVDVTWSM  215 (216)
Q Consensus       143 ~g~~CGk~I~It~-~NGkSV~atVVDeC~s~~GCd~~~~~~p~C~~n~lDLS-~avF~aLg~~~---~~G~i~VtWs~  215 (216)
                      +...|||+++||+ .+|.+|+++|||+|                .++.|||. +.||++|.-+-   ..|.+.|.+.|
T Consensus        59 gq~sCGkclrvTN~atga~~~~RiVDqC----------------sngGlDLD~~~vFn~iDtdG~G~~~Ghl~V~y~f  120 (125)
T d1bw3a_          59 GQAACGKCLRVTNPATGAQITARIVDQC----------------ANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQF  120 (125)
T ss_dssp             SGGGTTCEEEEEETTTTEEEEEEEEECC----------------SSSSCCSCSSSSHHHHCSSCHHHHHSEEEEEEEE
T ss_pred             CcccccceEEeeecccCcEEEEEEeecc----------------cCCCCccccHhhhheecCCCcccccccEEEEEEE
Confidence            4678999999999 58999999999998                45789999 78999997321   27888888876

>d4cpai_ g.3.2.1 (I:) Carboxypeptidase A inhibitor {Potato [TaxId: 4113]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Plant inhibitors of proteinases and amylases
family: Plant inhibitors of proteinases and amylases
domain: Carboxypeptidase A inhibitor
species: Potato [TaxId: 4113]

Probab=95.01  E-value=0.0028  Score=38.73  Aligned_cols=20  Identities=50%  Similarity=1.149  Sum_probs=17.7

Q ss_pred             hhCCCCCCCcCCCCCceEEe
Q 040138           30 SQCNGPCGTLDDCDGQLICI   49 (216)
Q Consensus        30 ~~c~~~c~~~~dc~g~l~c~   49 (216)
                      -=|++||++++||.|.-.|.
T Consensus         5 pic~kpc~t~ddcsg~~fcq   24 (37)
T d4cpai_           5 PICNKPCKTHDDCSGAWFCQ   24 (37)
T ss_dssp             TTTTCBCSSSSSSCCCSSCC
T ss_pred             cccCCCcccccCccchHHHH
Confidence            35999999999999998884

>d1ixta_ g.3.6.1 (A:) Conotoxin {Conus gloriamaris, Tx IXa [TaxId: 37336]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: omega toxin-like
family: Conotoxin
domain: Conotoxin
species: Conus gloriamaris, Tx IXa [TaxId: 37336]

Probab=85.68  E-value=0.22  Score=28.04  Aligned_cols=24  Identities=33%  Similarity=0.895  Sum_probs=21.1

Q ss_pred             hCCCCCCCcCCCCCceEEecCccC
Q 040138           31 QCNGPCGTLDDCDGQLICINGKCN   54 (216)
Q Consensus        31 ~c~~~c~~~~dc~g~l~c~~g~c~   54 (216)
                      +||.+|+++.||...-||..--|+
T Consensus         1 scnnscqshsdcashcictfrgcg   24 (27)
T d1ixta_           1 SCNNSCQSHSDCASHCICTFRGCG   24 (27)
T ss_dssp             CCCBCCSSSSCSSSSEEEETTEEE
T ss_pred             CccccccchhhhhhceeEeeeccc
Confidence            699999999999999999776664