Citrus Sinensis ID: 040209

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSACRIFLPLLLLIVML
Secondary Structure (PSIPRED)
cEEEEEcccccccccccccEEEEEEcccEEEEEEcccEEEEEccEEEEcccccccccccccEEEEccccccccccccccccccEEccccccccccEEEEEEEEccccccccccccccEEEccccccccccccccccccccccccEEEEEEEEEEEEEEEEEccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccEEEEEEEEcccccEEEEEEEEEcccccccccEEEEEEcccccccEEEEEEccEEccccccccccEEEEcccccHHHHHHccccccEEEEEEEEccccccccccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccccccEEEEEEccccEEEEEEccEEcEccccccccccccccccccccEEEEccccccccccHcHcccccEEccccccHHHcEEEEEEEEcccccccEEccccccEcccccccccccEEccccccccccccccEEEEEEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccccccccccccccccHcccccccccccccccccccccccEEEEEEEEEEccccEEEEEEEEEcccccccccEEEEEEcccccccEEEEEEccccccccccccccEEEEccHHHHHHHHHccccccccccccccccccEEEEccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
lrvslfnyqlyrhidqpgwklnwgwqgDEVIWNMWgaeateqgncskftggqlphccekspvivdllpgapynqqtancckggvlssltqdpskFVAGFqmnvggsadytgfqmpenftlgipgytcgnatevppskfysdggrrrTQALRTWNVTCiysqfmassspkccvslsafynntivpcpkcschcqglspancikygetpsllqqkhdpnkeqspvvicsqhmcpvrvhwHVKQSYTQYWRVKITITNLNVVQNYSQWNlvalhpnlqsvTQVFSfnykplnqygyindtgmFWGIEFYNDMLlqagesgnvqtEMLLHKDsgiftfregwgfprrilfngdecvmplpddyprlpnnahtaasssaCRIFLPLLLLIVML
Flexible Loop (DISEMBL)
LRVSLFNYQLYrhidqpgwklnWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSACRIFLPLLLLIVML
Low Complexity Region (SEG)
LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSACRIFlpllllIVML
Disordered region (IsUnstruct)
***SLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGE*****************VVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSACRIFLPLLLLIVM*
Disordered Region (DISOPRED)
LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTLGIPGYTCGNATEV*********GRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNNTIVPCPKCSCHC***************************QSPVVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGE*G*VQT**LLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDY*************SACRIFLPLLLLIVML
Disordered Region (DISEMBL)
LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQ**********PVVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSACRIFLPLLLLIVML
Disordered Region (DISPRO)
LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSACRIFLPLLLLIVML
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNAHTAASSSACRIFLPLLLLIVML
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	388	2.2.26 [Sep-21-2011]
O04500	454	COBRA-like protein 6 OS=A	yes	no	0.927	0.792	0.650	1e-139
Q6Z4G8	446	COBRA-like protein 1 OS=O	yes	no	0.976	0.849	0.580	1e-130
Q60E70	457	COBRA-like protein 3 OS=O	no	no	0.987	0.838	0.568	1e-130
Q8L8Q7	441	COBRA-like protein 2 OS=A	no	no	0.987	0.868	0.565	1e-129
Q9SRT7	452	COBRA-like protein 1 OS=A	no	no	0.979	0.840	0.564	1e-128
Q9LFW3	431	COBRA-like protein 4 OS=A	no	no	0.976	0.879	0.550	1e-126
Q7XR91	439	COBRA-like protein 7 OS=O	no	no	0.974	0.861	0.561	1e-126
Q94KT8	456	Protein COBRA OS=Arabidop	no	no	0.925	0.787	0.579	1e-125
Q75IW1	458	COBRA-like protein 2 OS=O	no	no	0.922	0.781	0.583	1e-124
Q10JL1	468	COBRA-like protein 5 OS=O	no	no	0.974	0.807	0.516	1e-121

>sp|O04500|COBL6_ARATH COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2

 Score =  493 bits (1270), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/366 (65%), Positives = 282/366 (77%), Gaps = 6/366 (1%)

Query: 1   LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKF-TGGQLPHCCEK 59
           ++V+L N Q YRH+++PGWKL+W W   EVIW+M GAE TEQGNCS F + G LPHCC +
Sbjct: 61  VQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLE 120

Query: 60  SPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADY-TGFQMPENF 118
            P IVDLLPGA  N Q ANCC+GGVL+S++QD +  V+ F M VG S D    F MP NF
Sbjct: 121 RPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNF 180

Query: 119 TLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
            +G+PGY+C NAT V P+KF +D GRR+TQAL TW   C+YSQF +S SPKCCVSLSAFY
Sbjct: 181 DIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFY 240

Query: 179 NNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWH 238
              IVPCP CS    G S ++C+K GE P  L+QKHDP++E SPVV CS HMCP+R+HWH
Sbjct: 241 YQNIVPCPTCS---CGCSSSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWH 297

Query: 239 VKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQY-GYINDT 297
           VK +Y +YWRVKIT TN N ++NY+ WNLV LHPNL+SV QVFSFNYK L  Y   INDT
Sbjct: 298 VKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDT 357

Query: 298 GMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPD 357
           GMFWG++FYND+LLQ G+ GNVQTE+LL KD G FTFREGW FPRRILFNGDECVMP PD
Sbjct: 358 GMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPD 417

Query: 358 DYPRLP 363
           D+PRLP
Sbjct: 418 DFPRLP 423

Arabidopsis thaliana (taxid: 3702)

>sp|Q6Z4G8|COBL1_ORYSJ COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1

 Score =  465 bits (1196), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 227/391 (58%), Positives = 276/391 (70%), Gaps = 12/391 (3%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           VSL+NYQ YRHI  PGWKL W W   E+IW M G +ATEQG+CSKF    +PHCC+K P 
Sbjct: 56  VSLYNYQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFKS-NIPHCCKKDPE 114

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
           IVDLLPG PYN Q ANCCKGGVL+S  QDP+  +A FQ++VG  G+ + T  ++P NFTL
Sbjct: 115 IVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKT-VRVPRNFTL 173

Query: 121 GIPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
             PG  YTCG+A  V P+KF+S  GRR TQA  TWNVTC YSQ +A  SP CCVSLS+FY
Sbjct: 174 KSPGPGYTCGSAKVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFY 233

Query: 179 NNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQ-SPVVICSQHMCPVRVHW 237
           N+TIV CP CSC CQ   P +C++ G +P L    +  NK+  +P+V C+ HMCP+RVHW
Sbjct: 234 NDTIVNCPTCSCGCQNNKPGSCVE-GNSPYLASVVNTHNKDSLTPLVQCTSHMCPIRVHW 292

Query: 238 HVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDT 297
           HVK +Y +YWRVKIT+TN N   NYSQWNLV  HP+  ++T +FSFNYK LN YG INDT
Sbjct: 293 HVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQHPSFDNLTTIFSFNYKSLNPYGVINDT 352

Query: 298 GMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPD 357
            M WGI++YND+L+ AG  GNVQ+E+L  KD   FTF +GW FPRR+ FNGD CVMP PD
Sbjct: 353 AMLWGIKYYNDLLMTAGPDGNVQSELLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPD 412

Query: 358 DYPRLPNNAHTAASSSACRIFLPLLLLIVML 388
            YP LPN +    SS    I LP + +   L
Sbjct: 413 AYPWLPNASTRVMSS----ILLPFITIWTAL 439

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q60E70|COBL3_ORYSJ COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1

 Score =  463 bits (1192), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/394 (56%), Positives = 278/394 (70%), Gaps = 11/394 (2%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           V++FNYQ +RHI  PGW+L W W   EVIW+M GA+ TEQG+CSKF GG  PHCC+K P 
Sbjct: 64  VTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGGT-PHCCKKDPT 122

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
           +VDLLPG PYN Q ANCCK GV+++  QDPS   + FQ++VG  G+ + T  ++P+NFTL
Sbjct: 123 VVDLLPGTPYNMQIANCCKAGVINTFNQDPSNAASSFQISVGLAGTTNKT-VKLPKNFTL 181

Query: 121 GIPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
             PG  YTCG A  V P+KF++  GRR TQAL TWNVTC YSQF+A  +P CCVSLS+FY
Sbjct: 182 KAPGPGYTCGRAMIVRPTKFFTGDGRRATQALMTWNVTCTYSQFLAQKTPSCCVSLSSFY 241

Query: 179 NNTIVPCPKCSCHCQ--GLSPANCIKYGETPSLLQQKHDPNK-EQSPVVICSQHMCPVRV 235
           N+TIV CP CSC CQ  G SP +C+    +P L      P K    P+V C+ HMCP+R+
Sbjct: 242 NDTIVNCPTCSCGCQNNGTSPGSCVN-ENSPYLQSAIDGPGKWTGQPLVQCTSHMCPIRI 300

Query: 236 HWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYG-YI 294
           HWHVK +Y +YWRVKITITN N   NY+QWNLVA HPN  ++TQ+FSFNYKPL  YG  I
Sbjct: 301 HWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVAQHPNFNNITQLFSFNYKPLTPYGSKI 360

Query: 295 NDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMP 354
           NDT MFWG++FYND+L+QAG  GN Q+E+LL KDS  FTF +GW FP R+ FNGD CVMP
Sbjct: 361 NDTAMFWGVKFYNDLLMQAGPLGNAQSELLLRKDSKDFTFDKGWAFPHRVYFNGDNCVMP 420

Query: 355 LPDDYPRLPNNAHTAASSSACRIFLPLLLLIVML 388
            PD YP LPN +          + +  ++L  +L
Sbjct: 421 PPDAYPWLPNASPLTKQPLTLSVLVFSIVLATLL 454

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8L8Q7|COBL2_ARATH COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/389 (56%), Positives = 274/389 (70%), Gaps = 6/389 (1%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           V++FN+Q YRHI+ PGW+L W W   EVIW+M G +ATEQG+CSKF G  +PHCC+K+P 
Sbjct: 56  VTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKG-NIPHCCKKTPA 114

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADY-TGFQMPENFTLG 121
           IVDLLPG PYNQQ +NCC+GGV+S+  QDP+  ++ FQ++VG S    T  + P N TL 
Sbjct: 115 IVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLK 174

Query: 122 IPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYN 179
            PG  YTCG A  V PS+F S   RR+TQ+L TWN+TC YSQF+A  +P CCVSLSAFYN
Sbjct: 175 APGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYN 234

Query: 180 NTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHV 239
            TIVPCP CSC CQ  S A      +  S++      N E  P++ C+QHMCP+RVHWHV
Sbjct: 235 ETIVPCPTCSCGCQNSSQAGTCVDPKIASVVPALGKNNLE--PLLQCTQHMCPIRVHWHV 292

Query: 240 KQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGM 299
           K SY +YWRVK+ ITN N   NYSQWNLV  HPN  ++T++FSFNYKPLN Y  INDT M
Sbjct: 293 KTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDNLTKLFSFNYKPLNPYLNINDTAM 352

Query: 300 FWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDY 359
            WGI+FYND L QAG  GNVQ+E+L  K+   FTF +GW FPRRI FNGD CVMP PD Y
Sbjct: 353 LWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVMPPPDSY 412

Query: 360 PRLPNNAHTAASSSACRIFLPLLLLIVML 388
           P LPN +   A+S    + +  L +++++
Sbjct: 413 PWLPNASPNIATSPFVILLITFLSVLILM 441

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRT7|COBL1_ARATH COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1

 Score =  457 bits (1176), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/393 (56%), Positives = 276/393 (70%), Gaps = 13/393 (3%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           V+++N+Q YRHI  PGW L W W   EVIW M G + TEQG+CSKF G  +PHCC+K+P 
Sbjct: 61  VTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKG-TIPHCCKKTPS 119

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
           +VDLLPG+PYNQQ ANCC+GGVL+S  QDP+  V+ FQ+ VG  G+ + T  ++P+NFTL
Sbjct: 120 VVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKT-VRVPKNFTL 178

Query: 121 GIPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
             PG  YTC  A  V P++F     RR TQAL TWNVTC YSQF+A  +P CCVSLS+FY
Sbjct: 179 KAPGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFY 238

Query: 179 NNTIVPCPKCSCHCQGLS-PANCIKYGETPSLLQQKHDPNKEQ--SPVVICSQHMCPVRV 235
           N TIV CP CSC C+  S P NC+   + P +     +P K     P+V C++HMCPVR+
Sbjct: 239 NKTIVSCPTCSCGCRNTSQPGNCVD-PKGPRIASVIPNPGKNAYIPPLVQCTKHMCPVRI 297

Query: 236 HWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYIN 295
           HWHVK +Y QYWRVK+TITN N   NYSQWNLV  HPN  ++TQ FSFNYKPL  Y  IN
Sbjct: 298 HWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQTFSFNYKPLTPYASIN 357

Query: 296 DTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPL 355
           DTG+ WGI+FYND+L+QAG  GNVQ+E+L  K++  FTF +GW FPRRI FNGD CVMP 
Sbjct: 358 DTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVMPP 417

Query: 356 PDDYPRLPNNAHTAASSSACRIFLPLLLLIVML 388
           PD YP LPN   T +  S   +F  + LL+++ 
Sbjct: 418 PDSYPWLPN---TGSHKSVGSLFAAMALLLIVF 447

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LFW3|COBL4_ARATH COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2

 Score =  452 bits (1162), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/387 (55%), Positives = 277/387 (71%), Gaps = 8/387 (2%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           V++ N+Q+YRHI  PGW L W W   EVIW+M GA+ TEQG+CSKF G  +PHCC+K+P 
Sbjct: 48  VTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKG-NVPHCCKKTPT 106

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
           +VDLLPG PYNQQ +NCCKGGV+ +  QDPS  V+ FQ++ G  G+ + T  ++P+NFTL
Sbjct: 107 VVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKT-VKLPKNFTL 165

Query: 121 --GIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
               PGYTCG A  VP + F +   RR+TQAL TWNVTC YSQF+A   P CCVS S+FY
Sbjct: 166 LGPGPGYTCGPAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFY 225

Query: 179 NNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWH 238
           N+TI PCP C+C C+  +  +C+K        +  + P K+ +P++ C+ HMCPVRVHWH
Sbjct: 226 NDTITPCPSCACGCE--NKKSCVKADSKILTKKGLNTPKKDNTPLLQCTHHMCPVRVHWH 283

Query: 239 VKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTG 298
           VK +Y  YWRVKI ITN N   N++ W L   HPNL +VTQVFSF+YKP++ YG INDTG
Sbjct: 284 VKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFSFDYKPVSPYGSINDTG 343

Query: 299 MFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDD 358
           MF+G +FYND+L++AG SGNVQ+E+LL KD   FTF++GW FPR++ FNGDEC++P PD 
Sbjct: 344 MFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAFPRKVYFNGDECMLPPPDS 403

Query: 359 YPRLPNNAHTAASSSACRIFLPLLLLI 385
           YP LPN+A    +S +  I L L + I
Sbjct: 404 YPFLPNSAQGNFASFSLTILLLLFISI 430

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XR91|COBL7_ORYSJ COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2

 Score =  451 bits (1159), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/401 (56%), Positives = 276/401 (68%), Gaps = 23/401 (5%)

Query: 1   LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKS 60
           + VS+ N+QLYRHI+QPGW+L+W W G+E+IW M GAEATEQG+C +  G   PHCCEK 
Sbjct: 47  VMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQ 106

Query: 61  PVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYT------GFQM 114
           PVIVDL PG PYN Q ++CC+GGVLSSLTQ+     A FQM VGG    T      G  +
Sbjct: 107 PVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPAL 166

Query: 115 PENFTLGIPGYTCGNATEVPPS---KFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCC 171
           P  F +G+PGY+C NAT+V  +   +F     R R     TW VTC YSQFM ++SP CC
Sbjct: 167 PSRFGVGVPGYSCSNATKVNATSSERFLLP--RARAPCAVTWQVTCTYSQFMEAASPTCC 224

Query: 172 VSLSAFYNNTIVPCPKCSCHC-QGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHM 230
           VSLS+FYN+TIVPCP+CSC C +  +   CI  GE P L        +  +PV  C+ HM
Sbjct: 225 VSLSSFYNSTIVPCPRCSCGCPRSPTAPQCISEGEKPEL---PAGDGEAVAPVFRCTDHM 281

Query: 231 CPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQ 290
           CPVRVHWHVK SY +YWRVK+TITN N V+NYS WNLV  HPNL+S+TQ+FSFNY+PL +
Sbjct: 282 CPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIE 341

Query: 291 YGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDE 350
           YG +NDTGMFWGI++YN+M+LQ    GNVQTEM+L KD   FTF  GW FPRR+ F+G E
Sbjct: 342 YGTLNDTGMFWGIQYYNEMMLQ---DGNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHE 398

Query: 351 CVMPLPDDYPRLPNNAHTAASSSACRI-----FLPLLLLIV 386
           CVMP PD YP LPN    +  S+A  I      LP + LI+
Sbjct: 399 CVMPPPDQYPLLPNGGPDSRVSAAQLIASSCLLLPFIFLIM 439

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q94KT8|COBRA_ARATH Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1

 Score =  450 bits (1157), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/371 (57%), Positives = 264/371 (71%), Gaps = 12/371 (3%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           V++FN+Q YRHI  PGW L W W   EVIW+M GA+ TEQG+CSK+ G  +PHCC+K P 
Sbjct: 64  VTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKG-NIPHCCKKDPT 122

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
           +VDLLPG PYNQQ ANCCKGGV++S  QDP+   + FQ++VG  G+ + T  ++P NFTL
Sbjct: 123 VVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKT-VRVPRNFTL 181

Query: 121 --GIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
               PGYTCG A  V P+KF +   RR TQA+ TWN+TC YSQF+A  +P CCVSLS+FY
Sbjct: 182 MGPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFY 241

Query: 179 NNTIVPCPKCSCHCQG--LSPANCIKYGETPSLLQQKHDPNKEQS---PVVICSQHMCPV 233
           N TIV CP C+C CQ        C+   +TP L      P K+ +   P+V C++HMCP+
Sbjct: 242 NETIVGCPTCACGCQNNRTESGACLD-PDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPI 300

Query: 234 RVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGY 293
           RVHWHVKQ+Y +YWRVKITITN N   NY+QWNLVA HPNL ++TQ+FSFNYK L  Y  
Sbjct: 301 RVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFSFNYKSLTPYAG 360

Query: 294 INDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVM 353
           +NDT M WG++FYND L +AG  GNVQ+E+L  KD   FTF +GW FPRRI FNGD CVM
Sbjct: 361 LNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVM 420

Query: 354 PLPDDYPRLPN 364
           P PD YP LPN
Sbjct: 421 PPPDSYPFLPN 431

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Arabidopsis thaliana (taxid: 3702)

>sp|Q75IW1|COBL2_ORYSJ COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1

 Score =  444 bits (1143), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/367 (58%), Positives = 264/367 (71%), Gaps = 9/367 (2%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           V+++N+Q YRHI  PGW L W W   E+IW+M G +ATEQG+CS F    +PHCC++ P 
Sbjct: 57  VTIYNFQKYRHIQAPGWSLGWAWAKKEIIWSMAGGQATEQGDCSAFKA-NIPHCCKRDPR 115

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
           +VDL+PGAPYN Q  NCCKGGVL+S  QDP   VA FQ+ VG  G+++ T  + P+NFTL
Sbjct: 116 VVDLVPGAPYNMQFGNCCKGGVLTSWVQDPLNAVASFQITVGHSGTSNKT-VKAPKNFTL 174

Query: 121 GIPG--YTCGNATEV-PPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAF 177
             PG  Y+CG A EV PP++F S  GRR TQA  TWNVTC YSQF+A  +P CCVSLS+F
Sbjct: 175 KAPGPGYSCGLAQEVKPPTRFISLDGRRTTQAHVTWNVTCTYSQFVAQRAPTCCVSLSSF 234

Query: 178 YNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNK-EQSPVVICSQHMCPVRVH 236
           YN TIV CPKC+C CQ   P +C++ G +P L    + P K   +P+V C+ HMCP+RVH
Sbjct: 235 YNETIVNCPKCACGCQNKKPGSCVE-GNSPYLASVVNGPGKGSLTPLVQCTPHMCPIRVH 293

Query: 237 WHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYIND 296
           WHVK +Y  YWRVK+TITN N   NYSQWNLV  HPN ++V+ VFSFNYK LN YG IND
Sbjct: 294 WHVKLNYRDYWRVKVTITNWNYRMNYSQWNLVVQHPNFENVSTVFSFNYKSLNPYGVIND 353

Query: 297 TGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLP 356
           T M WG+++YND+L+ AG  GNVQ+E+L  KD   FTF +GW FPRRI FNG+ CVMP P
Sbjct: 354 TAMMWGVKYYNDLLMVAGPDGNVQSELLFRKDRSTFTFDKGWAFPRRIYFNGESCVMPSP 413

Query: 357 DDYPRLP 363
           D YP LP
Sbjct: 414 DLYPWLP 420

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q10JL1|COBL5_ORYSJ COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1

 Score =  434 bits (1117), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/420 (51%), Positives = 275/420 (65%), Gaps = 42/420 (10%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           V++ NYQ+YR I  PGW + W W   EVIW++ GA+ATEQG+CSKF GG +PH C+++P 
Sbjct: 50  VTMSNYQMYRQILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGG-IPHSCKRTPA 108

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
           IVDLLPG PYNQQ ANCCK GV+S+  QDP+  V+ FQ++VG  G+ + T  ++P NFTL
Sbjct: 109 IVDLLPGVPYNQQIANCCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKT-VKLPTNFTL 167

Query: 121 GIPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
             PG  YTCG AT VP + + +   RRRTQAL TW VTC YSQ +AS  P CCVS S+FY
Sbjct: 168 AGPGPGYTCGPATIVPSTVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFY 227

Query: 179 NNTIVPCPKCSCHC------------------------------QGLSPANCIKYGETPS 208
           N+TIVPC +C+C C                                     CI      +
Sbjct: 228 NSTIVPCARCACGCGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRA 287

Query: 209 LLQQKHDPNKEQSPVVICSQHMCPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLV 268
           L    + P K+ +P++ C+ HMCP+RVHWHVK +Y  YWR KI ITN N   NY+QW LV
Sbjct: 288 LSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLV 347

Query: 269 ALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKD 328
           A HPNL +VT+VFSF YKPL  YG INDTGMF+G++FYND+L++AG  GNVQ+E+L+ KD
Sbjct: 348 AQHPNLNNVTEVFSFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKD 407

Query: 329 SGIFTFREGWGFPRRILFNGDECVMPLPDDYPRLPNNA------HTAASSSACRIFLPLL 382
              FTF +GW FPR+I FNGDEC MP PD YP LPN+A        AA++SA  + L L+
Sbjct: 408 YNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSAPIGPPRSVAAAASAILVVLLLV 467

Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
224118470	419	predicted protein [Populus trichocarpa]	0.987	0.914	0.674	1e-162
449457091	433	PREDICTED: COBRA-like protein 1-like [Cu	0.958	0.859	0.692	1e-158
449495573	403	PREDICTED: COBRA-like protein 1-like [Cu	0.958	0.923	0.692	1e-158
225448174	435	PREDICTED: COBRA-like protein 1-like [Vi	0.989	0.882	0.677	1e-155
297739554	431	unnamed protein product [Vitis vinifera]	0.989	0.890	0.677	1e-155
429326462	445	COBRA-like protein [Populus tomentosa]	0.987	0.860	0.613	1e-144
30681356	454	COBRA-like protein 6 [Arabidopsis thalia	0.927	0.792	0.650	1e-137
297849286	456	hypothetical protein ARALYDRAFT_471080 [	0.922	0.785	0.653	1e-133
242046228	458	hypothetical protein SORBIDRAFT_02g03872	0.961	0.814	0.596	1e-131
255580344	456	Protein COBRA precursor, putative [Ricin	0.969	0.824	0.581	1e-129

>gi|224118470|ref|XP_002331490.1| predicted protein [Populus trichocarpa] gi|222873568|gb|EEF10699.1| predicted protein [Populus trichocarpa]

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 261/387 (67%), Positives = 315/387 (81%), Gaps = 4/387 (1%)

Query: 1   LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKS 60
           L VS++N+Q YRH++ PGWKLNW W+G EVIW+M GAEATEQGNC++F    LPHCCEK 
Sbjct: 37  LMVSIYNFQQYRHVEPPGWKLNWAWKGKEVIWSMQGAEATEQGNCTEFKESTLPHCCEKE 96

Query: 61  PVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTL 120
           P IVDLLPG  YN QT NCCKGGVLSS+ QDPSK+VA FQM VGGS   + F+MPENF L
Sbjct: 97  PFIVDLLPGTNYNAQTQNCCKGGVLSSMKQDPSKYVATFQMAVGGSGTNSQFKMPENFKL 156

Query: 121 GIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNN 180
           G+PGY+CG A +V PS++ +DGGRR TQAL TWNVTC+YSQ +AS +P+CCVSLSAFYN 
Sbjct: 157 GVPGYSCGGAVKVEPSRYTTDGGRRWTQALATWNVTCMYSQSLASPTPRCCVSLSAFYNQ 216

Query: 181 TIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVK 240
           TIV CP+CSC CQG     C+KYGETP LL+Q  DP    +PVV CS+HMCP+RVHWH+K
Sbjct: 217 TIVSCPRCSCGCQGQPGTKCVKYGETPPLLKQNQDP----TPVVRCSEHMCPIRVHWHLK 272

Query: 241 QSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMF 300
           +SY QYWR K+T+TN ++++NYS+WNLV LHPNLQS+TQVFSFNY PLN+YGYINDTGMF
Sbjct: 273 ESYKQYWRAKMTVTNFHIMKNYSEWNLVVLHPNLQSLTQVFSFNYAPLNRYGYINDTGMF 332

Query: 301 WGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYP 360
           WG+ FYND+LLQ G+ GN+QTE+LL KD GIFTFREGWGFPR+I FNGDECVMP PD+YP
Sbjct: 333 WGLPFYNDILLQEGKDGNLQTEILLRKDPGIFTFREGWGFPRKIQFNGDECVMPPPDEYP 392

Query: 361 RLPNNAHTAASSSACRIFLPLLLLIVM 387
            LPN  H+A++++   I   L L  ++
Sbjct: 393 SLPNKGHSASATTPFIILFSLFLAFML 419

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457091|ref|XP_004146282.1| PREDICTED: COBRA-like protein 1-like [Cucumis sativus]

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 259/374 (69%), Positives = 301/374 (80%), Gaps = 2/374 (0%)

Query: 1   LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKS 60
           +RVSL+N+QL+RH++ PGWKL W W+G+EVIW MWGAE T+QGNCSK+ G +LPHCCEK 
Sbjct: 46  VRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKK 105

Query: 61  PVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADY-TGFQMPENFT 119
           P IVDL+PGAPY  Q ANCCK GVLSS+ Q+ S   A FQMNVG S+      +MP NFT
Sbjct: 106 PEIVDLMPGAPYKLQVANCCKAGVLSSMRQESSNSGAAFQMNVGKSSGKDVDSKMPANFT 165

Query: 120 LGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYN 179
           LG+PGYTC    +VPP+KF  DGGRR  Q L TWNVTC+YSQF +S +P CCVSLS+FYN
Sbjct: 166 LGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYN 225

Query: 180 NTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPN-KEQSPVVICSQHMCPVRVHWH 238
           +TIVPCP+CSC CQGL    C+K GE PS+LQ  H+ N  E   +V CSQHMCP+RVHWH
Sbjct: 226 STIVPCPQCSCGCQGLKGTKCVKSGEAPSVLQLPHEHNTAEVEALVRCSQHMCPIRVHWH 285

Query: 239 VKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTG 298
           VKQSYTQYWRVKITITNLN  +NYS WNLV +HPNL+++TQVFSFNY PLNQYG INDTG
Sbjct: 286 VKQSYTQYWRVKITITNLNFAKNYSDWNLVVMHPNLRNITQVFSFNYSPLNQYGNINDTG 345

Query: 299 MFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDD 358
           MFWGI FYND+LL +GE GNVQTE+LL KDS IFTFREGW FPRRI+FNGDECVMP PD 
Sbjct: 346 MFWGIHFYNDLLLTSGERGNVQTEILLQKDSEIFTFREGWAFPRRIMFNGDECVMPPPDQ 405

Query: 359 YPRLPNNAHTAASS 372
           YPRLPN AH + ++
Sbjct: 406 YPRLPNKAHRSMTA 419

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449495573|ref|XP_004159883.1| PREDICTED: COBRA-like protein 1-like [Cucumis sativus]

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 259/374 (69%), Positives = 301/374 (80%), Gaps = 2/374 (0%)

Query: 1   LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKS 60
           +RVSL+N+QL+RH++ PGWKL W W+G+EVIW MWGAE T+QGNCSK+ G +LPHCCEK 
Sbjct: 16  VRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKK 75

Query: 61  PVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADY-TGFQMPENFT 119
           P IVDL+PGAPY  Q ANCCK GVLSS+ Q+ S   A FQMNVG S+      +MP NFT
Sbjct: 76  PEIVDLMPGAPYKLQVANCCKAGVLSSMRQESSNSGAAFQMNVGKSSGKDVDSKMPANFT 135

Query: 120 LGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYN 179
           LG+PGYTC    +VPP+KF  DGGRR  Q L TWNVTC+YSQF +S +P CCVSLS+FYN
Sbjct: 136 LGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYN 195

Query: 180 NTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPN-KEQSPVVICSQHMCPVRVHWH 238
           +TIVPCP+CSC CQGL    C+K GE PS+LQ  H+ N  E   +V CSQHMCP+RVHWH
Sbjct: 196 STIVPCPQCSCGCQGLKGTKCVKSGEAPSVLQLPHEHNTAEVEALVRCSQHMCPIRVHWH 255

Query: 239 VKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTG 298
           VKQSYTQYWRVKITITNLN  +NYS WNLV +HPNL+++TQVFSFNY PLNQYG INDTG
Sbjct: 256 VKQSYTQYWRVKITITNLNFAKNYSDWNLVVMHPNLRNITQVFSFNYSPLNQYGNINDTG 315

Query: 299 MFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDD 358
           MFWGI FYND+LL +GE GNVQTE+LL KDS IFTFREGW FPRRI+FNGDECVMP PD 
Sbjct: 316 MFWGIHFYNDLLLTSGERGNVQTEILLQKDSEIFTFREGWAFPRRIMFNGDECVMPPPDQ 375

Query: 359 YPRLPNNAHTAASS 372
           YPRLPN AH + ++
Sbjct: 376 YPRLPNKAHRSMTA 389

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448174|ref|XP_002264330.1| PREDICTED: COBRA-like protein 1-like [Vitis vinifera]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 263/388 (67%), Positives = 317/388 (81%), Gaps = 4/388 (1%)

Query: 2   RVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSP 61
           RVS+ NYQLYRHI+ PGWKL+W W GDEVIW+MWGA A EQGNCS+F G QLP+CCEK+P
Sbjct: 51  RVSIINYQLYRHIETPGWKLSWTWPGDEVIWDMWGALAHEQGNCSEFKGEQLPYCCEKTP 110

Query: 62  VIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG-GSADYTGFQMPENFTL 120
           +I+D  PG P+N+Q ANCC+ G+L+S+ QDPSK  A FQMNVG  S++ +   MP NF+L
Sbjct: 111 LILDRGPGTPFNKQVANCCRDGLLTSMIQDPSKHGAMFQMNVGTASSNVSDMTMPRNFSL 170

Query: 121 GIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNN 180
           G+PGYTCG+  +VPPS+F  +GGRR TQAL TWNV+C YSQF+AS++P CCVSLSAFYN+
Sbjct: 171 GVPGYTCGDPFQVPPSRFPEEGGRRWTQALMTWNVSCSYSQFLASTAPTCCVSLSAFYNS 230

Query: 181 TIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVK 240
           TIVPCP+CSC C+G+    C K GETP LL Q    + +Q  +V CS+HMCP+RVHWHVK
Sbjct: 231 TIVPCPQCSCGCEGIPGTKCAKPGETPLLLPQG---DGQQPDLVRCSRHMCPIRVHWHVK 287

Query: 241 QSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMF 300
            SY +YWRVKIT+TNLN+V+NYS WNLV LHPNLQS+TQVFSFNY+ LN++G INDTGMF
Sbjct: 288 TSYREYWRVKITVTNLNLVKNYSAWNLVVLHPNLQSITQVFSFNYRSLNEHGTINDTGMF 347

Query: 301 WGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYP 360
           WGI++YN++LLQAGESGNVQTEMLLHKD GIFTFREGW FPR+I FNGD+CVMP PD+YP
Sbjct: 348 WGIQYYNELLLQAGESGNVQTEMLLHKDPGIFTFREGWAFPRKISFNGDQCVMPSPDEYP 407

Query: 361 RLPNNAHTAASSSACRIFLPLLLLIVML 388
           RLPN   +A   S C I L  L +IVML
Sbjct: 408 RLPNTGPSATPPSLCIILLLSLSVIVML 435

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739554|emb|CBI29736.3| unnamed protein product [Vitis vinifera]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 263/388 (67%), Positives = 317/388 (81%), Gaps = 4/388 (1%)

Query: 2   RVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSP 61
           RVS+ NYQLYRHI+ PGWKL+W W GDEVIW+MWGA A EQGNCS+F G QLP+CCEK+P
Sbjct: 47  RVSIINYQLYRHIETPGWKLSWTWPGDEVIWDMWGALAHEQGNCSEFKGEQLPYCCEKTP 106

Query: 62  VIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG-GSADYTGFQMPENFTL 120
           +I+D  PG P+N+Q ANCC+ G+L+S+ QDPSK  A FQMNVG  S++ +   MP NF+L
Sbjct: 107 LILDRGPGTPFNKQVANCCRDGLLTSMIQDPSKHGAMFQMNVGTASSNVSDMTMPRNFSL 166

Query: 121 GIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNN 180
           G+PGYTCG+  +VPPS+F  +GGRR TQAL TWNV+C YSQF+AS++P CCVSLSAFYN+
Sbjct: 167 GVPGYTCGDPFQVPPSRFPEEGGRRWTQALMTWNVSCSYSQFLASTAPTCCVSLSAFYNS 226

Query: 181 TIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVK 240
           TIVPCP+CSC C+G+    C K GETP LL Q    + +Q  +V CS+HMCP+RVHWHVK
Sbjct: 227 TIVPCPQCSCGCEGIPGTKCAKPGETPLLLPQG---DGQQPDLVRCSRHMCPIRVHWHVK 283

Query: 241 QSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMF 300
            SY +YWRVKIT+TNLN+V+NYS WNLV LHPNLQS+TQVFSFNY+ LN++G INDTGMF
Sbjct: 284 TSYREYWRVKITVTNLNLVKNYSAWNLVVLHPNLQSITQVFSFNYRSLNEHGTINDTGMF 343

Query: 301 WGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDYP 360
           WGI++YN++LLQAGESGNVQTEMLLHKD GIFTFREGW FPR+I FNGD+CVMP PD+YP
Sbjct: 344 WGIQYYNELLLQAGESGNVQTEMLLHKDPGIFTFREGWAFPRKISFNGDQCVMPSPDEYP 403

Query: 361 RLPNNAHTAASSSACRIFLPLLLLIVML 388
           RLPN   +A   S C I L  L +IVML
Sbjct: 404 RLPNTGPSATPPSLCIILLLSLSVIVML 431

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|429326462|gb|AFZ78571.1| COBRA-like protein [Populus tomentosa]

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 241/393 (61%), Positives = 291/393 (74%), Gaps = 10/393 (2%)

Query: 1   LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKS 60
           L VS++N+Q YRH++ PGWKLNW W+G EVIW+M GAEATEQGNC++F G  LPHCCEK 
Sbjct: 57  LMVSIYNFQQYRHVEPPGWKLNWAWKGKEVIWSMQGAEATEQGNCTEFKGSTLPHCCEKE 116

Query: 61  PVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTGFQMPENFTL 120
           P IVDLLPG  YN QT NCCKGGVLSS+ QDPSK+VA FQM VGGS   + F MPENF L
Sbjct: 117 PFIVDLLPGTNYNAQTQNCCKGGVLSSMKQDPSKYVATFQMAVGGSGTNSRFIMPENFNL 176

Query: 121 GIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNN 180
           G+PGY+CG A +V PS++ +DGGRR TQA+ TWNVTC+YSQ +AS +P+CCVSLSAFYN 
Sbjct: 177 GVPGYSCGGAVKVEPSRYTTDGGRRWTQAIATWNVTCMYSQSLASPTPRCCVSLSAFYNQ 236

Query: 181 TIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVK 240
           TIV CP+CSC CQG     C+KYGETP LL+Q  DP    +PVV CS+HMCP+RVHWH+K
Sbjct: 237 TIVSCPRCSCGCQGQPGTKCVKYGETPPLLKQNQDP----TPVVRCSEHMCPIRVHWHLK 292

Query: 241 QSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMF 300
           QSY QYWR K+T+TN N+++NYS+WNLV LHPNLQS+TQVFSFNY PLN+YGYI      
Sbjct: 293 QSYKQYWRAKMTVTNFNIMKNYSEWNLVVLHPNLQSLTQVFSFNYAPLNRYGYIMILECS 352

Query: 301 WGIEFYNDMLLQAGESGNVQTEMLLHK------DSGIFTFREGWGFPRRILFNGDECVMP 354
            G  F      +    G  + +    K         IFTFREGWGFPR+I FNGDECVMP
Sbjct: 353 GGFRFTMTFYYKKERMGIYRLKFYYAKIQRFLLSERIFTFREGWGFPRKIQFNGDECVMP 412

Query: 355 LPDDYPRLPNNAHTAASSSACRIFLPLLLLIVM 387
            PD+YP LPN  H+A++++   I   L L  ++
Sbjct: 413 PPDEYPSLPNKGHSASATTPFIILFSLFLAFML 445

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30681356|ref|NP_172450.2| COBRA-like protein 6 [Arabidopsis thaliana] gi|34222500|sp|O04500.2|COBL6_ARATH RecName: Full=COBRA-like protein 6; Flags: Precursor gi|332190371|gb|AEE28492.1| COBRA-like protein 6 [Arabidopsis thaliana]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 238/366 (65%), Positives = 282/366 (77%), Gaps = 6/366 (1%)

Query: 1   LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKF-TGGQLPHCCEK 59
           ++V+L N Q YRH+++PGWKL+W W   EVIW+M GAE TEQGNCS F + G LPHCC +
Sbjct: 61  VQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLE 120

Query: 60  SPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADY-TGFQMPENF 118
            P IVDLLPGA  N Q ANCC+GGVL+S++QD +  V+ F M VG S D    F MP NF
Sbjct: 121 RPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNF 180

Query: 119 TLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
            +G+PGY+C NAT V P+KF +D GRR+TQAL TW   C+YSQF +S SPKCCVSLSAFY
Sbjct: 181 DIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFY 240

Query: 179 NNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWH 238
              IVPCP CS    G S ++C+K GE P  L+QKHDP++E SPVV CS HMCP+R+HWH
Sbjct: 241 YQNIVPCPTCS---CGCSSSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWH 297

Query: 239 VKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQY-GYINDT 297
           VK +Y +YWRVKIT TN N ++NY+ WNLV LHPNL+SV QVFSFNYK L  Y   INDT
Sbjct: 298 VKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDT 357

Query: 298 GMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPD 357
           GMFWG++FYND+LLQ G+ GNVQTE+LL KD G FTFREGW FPRRILFNGDECVMP PD
Sbjct: 358 GMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPD 417

Query: 358 DYPRLP 363
           D+PRLP
Sbjct: 418 DFPRLP 423

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849286|ref|XP_002892524.1| hypothetical protein ARALYDRAFT_471080 [Arabidopsis lyrata subsp. lyrata] gi|297338366|gb|EFH68783.1| hypothetical protein ARALYDRAFT_471080 [Arabidopsis lyrata subsp. lyrata]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/364 (65%), Positives = 279/364 (76%), Gaps = 6/364 (1%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKF-TGGQLPHCCEKSP 61
           V+L N Q YRH+++PGWKL+W W  +EVIW M GAE TEQGNCS F + G LPHCC + P
Sbjct: 63  VTLENMQEYRHVEKPGWKLSWHWLNNEVIWEMKGAETTEQGNCSAFASSGNLPHCCLQRP 122

Query: 62  VIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADY-TGFQMPENFTL 120
            IVDLLPGA  N Q ANCC+GGVL+S++QD +  V+ FQM VG S D    F +P NF +
Sbjct: 123 TIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFQMVVGSSPDGPEEFYIPYNFDI 182

Query: 121 GIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYNN 180
           G+PGY+C NAT V P+KF +D GRR+TQAL TW   C+YSQF +S SPKCCVSLSAFY  
Sbjct: 183 GVPGYSCDNATSVTPTKFSTDKGRRKTQALATWEAVCVYSQFRSSQSPKCCVSLSAFYYQ 242

Query: 181 TIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHVK 240
            IVPCP CS    G S + C+K GE P  L+QKHDP +E SPVV CS HMCP+R+HWHVK
Sbjct: 243 NIVPCPTCS---CGCSSSPCVKDGELPPYLEQKHDPEEEVSPVVKCSDHMCPIRIHWHVK 299

Query: 241 QSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQY-GYINDTGM 299
            +Y +YWRVKIT TN N ++NY+ WNLV LHPNL+SV QVFSFNYK L  Y   INDTGM
Sbjct: 300 VNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNGINDTGM 359

Query: 300 FWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDY 359
           FWG++FYND+LLQ G+ GNVQTE+LL KD G FTFREGW FPRRILFNGDECVMP PDD+
Sbjct: 360 FWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPDDF 419

Query: 360 PRLP 363
           PRLP
Sbjct: 420 PRLP 423

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242046228|ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [Sorghum bicolor] gi|241924362|gb|EER97506.1| hypothetical protein SORBIDRAFT_02g038720 [Sorghum bicolor]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/387 (59%), Positives = 278/387 (71%), Gaps = 14/387 (3%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           VSL+NYQ YRHI  PGWKL W W   EVIW M G +ATEQG+CSKF    +PHCC K P 
Sbjct: 65  VSLYNYQQYRHIQAPGWKLGWVWAKKEVIWAMTGGQATEQGDCSKFKT-NIPHCCRKDPE 123

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
           +VDLLPG PYN Q ANCCKGGVL+S  QDPS  VA FQ++VG  G+ + T  ++P+NFTL
Sbjct: 124 VVDLLPGTPYNMQIANCCKGGVLTSWAQDPSNAVASFQVSVGQAGTTNRT-VKVPKNFTL 182

Query: 121 GIPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
             PG  YTCG A  V P+KF S  GRR TQA  TWNVTC YSQF+A  SP CCVSLS+FY
Sbjct: 183 KAPGPGYTCGTAKLVTPTKFISPDGRRSTQAHMTWNVTCTYSQFLAQRSPSCCVSLSSFY 242

Query: 179 NNTIVPCPKCSCHCQ--GLSPANCIKYGETPSLLQQKHDPNKEQ-SPVVICSQHMCPVRV 235
           N+TIV CP CSC CQ    +P +C++ G +P L    +DPNK   +P+V C+ HMCP+RV
Sbjct: 243 NDTIVNCPTCSCGCQNNSTAPGSCVE-GNSPYLASVVNDPNKNSLAPLVQCTSHMCPIRV 301

Query: 236 HWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYIN 295
           HWHVK +Y +YWRVKIT+TN N   NYSQWNLVA HPN  ++T +FSFNYKPLN YG IN
Sbjct: 302 HWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVAQHPNFDNLTTIFSFNYKPLNPYGVIN 361

Query: 296 DTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPL 355
           DT M WGI++YND+L+ AG  GNVQ+E+L  K+   FTF++GW FPRR+ FNGD CVMP 
Sbjct: 362 DTAMLWGIKYYNDLLMTAGPDGNVQSELLFRKEPSTFTFQKGWAFPRRVYFNGDNCVMPP 421

Query: 356 PDDYPRLPNNAHTAASSSACRIFLPLL 382
           PD YP LPN    A+   +  + LP +
Sbjct: 422 PDAYPWLPN----ASPRLSASLLLPFV 444

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580344|ref|XP_002531000.1| Protein COBRA precursor, putative [Ricinus communis] gi|223529427|gb|EEF31388.1| Protein COBRA precursor, putative [Ricinus communis]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/392 (58%), Positives = 275/392 (70%), Gaps = 16/392 (4%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
           V+++N+Q YRHI  PGW L W W   EVIWNM G + TEQG+CSKF G  +PHCC+K+P 
Sbjct: 61  VTMYNFQQYRHIQAPGWTLGWTWAKKEVIWNMVGGQTTEQGDCSKFKG-NIPHCCKKNPT 119

Query: 63  IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTG-FQMPENFTLG 121
           +VDLLPG PYNQQ ANCCKGGV+SS  QDPSK V+ FQ++VG +       ++P+NFTL 
Sbjct: 120 VVDLLPGTPYNQQIANCCKGGVISSWGQDPSKAVSAFQLSVGAAGTTNKTVRVPKNFTLK 179

Query: 122 IPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYN 179
            PG  YTCG A  V PS+F++   RR TQAL TWNVTC YSQF+A  +P CCVSLS+FYN
Sbjct: 180 APGPGYTCGPAKIVRPSRFFTTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYN 239

Query: 180 NTIVPCPKCSCHCQGLSP--ANCIKYGETPSLLQQKHDPNKEQ-SPVVICSQHMCPVRVH 236
           NTIVPCP C+C CQ  S     C+   + P L        K   +P+V C++HMCPVR+H
Sbjct: 240 NTIVPCPTCACGCQSNSSLSGGCVD-PDAPHLASVVSGSGKNSPAPLVQCTRHMCPVRIH 298

Query: 237 WHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYIND 296
           WHVK +Y +YWRVKITITN N   NYSQWNLV  HPN  ++TQ+FSFNYK LN Y  IND
Sbjct: 299 WHVKLNYREYWRVKITITNFNYNMNYSQWNLVVQHPNFDNLTQIFSFNYKSLNPYAAIND 358

Query: 297 TGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLP 356
           T M WG++FYND+L+QAG SGNVQ+E+L  KD   FTF +GW FPRRI FNGD CVMP P
Sbjct: 359 TAMLWGVQFYNDLLMQAGPSGNVQSELLFQKDKTTFTFEKGWAFPRRIYFNGDNCVMPPP 418

Query: 357 DDYPRLPNNAHTAASSSACRIFLPLLLLIVML 388
           D YP LPN        +  R F P L+L + L
Sbjct: 419 DAYPWLPN--------AGSRQFSPPLVLTITL 442

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
TAIR|locus:2024377	454	COBL6 "AT1G09790" [Arabidopsis	0.956	0.817	0.649	1.6e-141
TAIR|locus:2076507	452	COBL1 "COBRA-like protein 1 pr	0.945	0.811	0.579	1e-123
TAIR|locus:2086601	441	COBL2 "AT3G29810" [Arabidopsis	0.945	0.832	0.587	2.7e-123
TAIR|locus:2173532	456	COB "AT5G60920" [Arabidopsis t	0.925	0.787	0.582	4e-122
TAIR|locus:2143151	431	IRX6 "IRREGULAR XYLEM 6" [Arab	0.922	0.830	0.570	3.6e-121
TAIR|locus:2173547	204	COBL5 "COBRA-like protein 5 pr	0.378	0.720	0.459	1.4e-32
TAIR|locus:2155889	663	SHV2 "SHAVEN 2" [Arabidopsis t	0.654	0.383	0.297	5.6e-26
TAIR|locus:2130100	661	COBL7 "AT4G16120" [Arabidopsis	0.703	0.413	0.257	5.1e-23
TAIR|locus:2085785	672	COBL10 "COBRA-like protein 10	0.701	0.404	0.278	6.6e-22
TAIR|locus:2136452	668	COBL11 "COBRA-like protein 11	0.507	0.294	0.302	2e-17

TAIR|locus:2024377 COBL6 "AT1G09790" [Arabidopsis thaliana (taxid:3702)]

 Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
 Identities = 245/377 (64%), Positives = 293/377 (77%)

Query:     1 LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKF-TGGQLPHCCEK 59
             ++V+L N Q YRH+++PGWKL+W W   EVIW+M GAE TEQGNCS F + G LPHCC +
Sbjct:    61 VQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLE 120

Query:    60 SPVIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTG-FQMPENF 118
              P IVDLLPGA  N Q ANCC+GGVL+S++QD +  V+ F M VG S D    F MP NF
Sbjct:   121 RPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNF 180

Query:   119 TLGIPGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
              +G+PGY+C NAT V P+KF +D GRR+TQAL TW   C+YSQF +S SPKCCVSLSAFY
Sbjct:   181 DIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFY 240

Query:   179 NNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWH 238
                IVPCP CSC C   S ++C+K GE P  L+QKHDP++E SPVV CS HMCP+R+HWH
Sbjct:   241 YQNIVPCPTCSCGC---SSSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWH 297

Query:   239 VKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQY-GYINDT 297
             VK +Y +YWRVKIT TN N ++NY+ WNLV LHPNL+SV QVFSFNYK L  Y   INDT
Sbjct:   298 VKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDT 357

Query:   298 GMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPD 357
             GMFWG++FYND+LLQ G+ GNVQTE+LL KD G FTFREGW FPRRILFNGDECVMP PD
Sbjct:   358 GMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPD 417

Query:   358 DYPRLPNNAHTAASSSA 374
             D+PRLP +AH+++SSSA
Sbjct:   418 DFPRLPKSAHSSSSSSA 434

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2076507 COBL1 "COBRA-like protein 1 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
 Identities = 219/378 (57%), Positives = 269/378 (71%)

Query:     3 VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
             V+++N+Q YRHI  PGW L W W   EVIW M G + TEQG+CSKF G  +PHCC+K+P 
Sbjct:    61 VTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKG-TIPHCCKKTPS 119

Query:    63 IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
             +VDLLPG+PYNQQ ANCC+GGVL+S  QDP+  V+ FQ+ VG  G+ + T  ++P+NFTL
Sbjct:   120 VVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKT-VRVPKNFTL 178

Query:   121 GIPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
               PG  YTC  A  V P++F     RR TQAL TWNVTC YSQF+A  +P CCVSLS+FY
Sbjct:   179 KAPGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFY 238

Query:   179 NNTIVPCPKCSCHCQGLS-PANCIKYGETPSLLQQKHDPNKEQ--SPVVICSQHMCPVRV 235
             N TIV CP CSC C+  S P NC+   + P +     +P K     P+V C++HMCPVR+
Sbjct:   239 NKTIVSCPTCSCGCRNTSQPGNCVD-PKGPRIASVIPNPGKNAYIPPLVQCTKHMCPVRI 297

Query:   236 HWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYIN 295
             HWHVK +Y QYWRVK+TITN N   NYSQWNLV  HPN  ++TQ FSFNYKPL  Y  IN
Sbjct:   298 HWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQTFSFNYKPLTPYASIN 357

Query:   296 DTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPL 355
             DTG+ WGI+FYND+L+QAG  GNVQ+E+L  K++  FTF +GW FPRRI FNGD CVMP 
Sbjct:   358 DTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVMPP 417

Query:   356 PDDYPRLPNN-AHTAASS 372
             PD YP LPN  +H +  S
Sbjct:   418 PDSYPWLPNTGSHKSVGS 435

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0016570 "histone modification" evidence=RCA

GO:0048449 "floral organ formation" evidence=RCA

TAIR|locus:2086601 COBL2 "AT3G29810" [Arabidopsis thaliana (taxid:3702)]

 Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
 Identities = 219/373 (58%), Positives = 266/373 (71%)

Query:     3 VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
             V++FN+Q YRHI+ PGW+L W W   EVIW+M G +ATEQG+CSKF G  +PHCC+K+P 
Sbjct:    56 VTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKGN-IPHCCKKTPA 114

Query:    63 IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADY-TGFQMPENFTLG 121
             IVDLLPG PYNQQ +NCC+GGV+S+  QDP+  ++ FQ++VG S    T  + P N TL 
Sbjct:   115 IVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLK 174

Query:   122 IPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFYN 179
              PG  YTCG A  V PS+F S   RR+TQ+L TWN+TC YSQF+A  +P CCVSLSAFYN
Sbjct:   175 APGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYN 234

Query:   180 NTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHDPNKEQSPVVICSQHMCPVRVHWHV 239
              TIVPCP CSC CQ  S A      +  S++      N E  P++ C+QHMCP+RVHWHV
Sbjct:   235 ETIVPCPTCSCGCQNSSQAGTCVDPKIASVVPALGKNNLE--PLLQCTQHMCPIRVHWHV 292

Query:   240 KQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGM 299
             K SY +YWRVK+ ITN N   NYSQWNLV  HPN  ++T++FSFNYKPLN Y  INDT M
Sbjct:   293 KTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDNLTKLFSFNYKPLNPYLNINDTAM 352

Query:   300 FWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLPDDY 359
              WGI+FYND L QAG  GNVQ+E+L  K+   FTF +GW FPRRI FNGD CVMP PD Y
Sbjct:   353 LWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVMPPPDSY 412

Query:   360 PRLPNNAHTAASS 372
             P LPN +   A+S
Sbjct:   413 PWLPNASPNIATS 425

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2173532 COB "AT5G60920" [Arabidopsis thaliana (taxid:3702)]

 Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
 Identities = 216/371 (58%), Positives = 265/371 (71%)

Query:     3 VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
             V++FN+Q YRHI  PGW L W W   EVIW+M GA+ TEQG+CSK+ G  +PHCC+K P 
Sbjct:    64 VTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGN-IPHCCKKDPT 122

Query:    63 IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
             +VDLLPG PYNQQ ANCCKGGV++S  QDP+   + FQ++VG  G+ + T  ++P NFTL
Sbjct:   123 VVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKT-VRVPRNFTL 181

Query:   121 -GI-PGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
              G  PGYTCG A  V P+KF +   RR TQA+ TWN+TC YSQF+A  +P CCVSLS+FY
Sbjct:   182 MGPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFY 241

Query:   179 NNTIVPCPKCSCHCQG--LSPANCIKYGETPSLLQQKHDPNKEQS---PVVICSQHMCPV 233
             N TIV CP C+C CQ        C+   +TP L      P K+ +   P+V C++HMCP+
Sbjct:   242 NETIVGCPTCACGCQNNRTESGACLD-PDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPI 300

Query:   234 RVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGY 293
             RVHWHVKQ+Y +YWRVKITITN N   NY+QWNLVA HPNL ++TQ+FSFNYK L  Y  
Sbjct:   301 RVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFSFNYKSLTPYAG 360

Query:   294 INDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVM 353
             +NDT M WG++FYND L +AG  GNVQ+E+L  KD   FTF +GW FPRRI FNGD CVM
Sbjct:   361 LNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVM 420

Query:   354 PLPDDYPRLPN 364
             P PD YP LPN
Sbjct:   421 PPPDSYPFLPN 431

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009825 "multidimensional cell growth" evidence=RCA;IMP

GO:0009897 "external side of plasma membrane" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0010215 "cellulose microfibril organization" evidence=IMP

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=RCA;IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0009930 "longitudinal side of cell surface" evidence=IDA

TAIR|locus:2143151 IRX6 "IRREGULAR XYLEM 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1192 (424.7 bits), Expect = 3.6e-121, P = 3.6e-121
 Identities = 211/370 (57%), Positives = 273/370 (73%)

Query:     3 VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
             V++ N+Q+YRHI  PGW L W W   EVIW+M GA+ TEQG+CSKF G  +PHCC+K+P 
Sbjct:    48 VTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGN-VPHCCKKTPT 106

Query:    63 IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
             +VDLLPG PYNQQ +NCCKGGV+ +  QDPS  V+ FQ++ G  G+ + T  ++P+NFTL
Sbjct:   107 VVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKT-VKLPKNFTL 165

Query:   121 -GI-PGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQFMASSSPKCCVSLSAFY 178
              G  PGYTCG A  VP + F +   RR+TQAL TWNVTC YSQF+A   P CCVS S+FY
Sbjct:   166 LGPGPGYTCGPAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFY 225

Query:   179 NNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQK--HDPNKEQSPVVICSQHMCPVRVH 236
             N+TI PCP C+C C+  +  +C+K      +L +K  + P K+ +P++ C+ HMCPVRVH
Sbjct:   226 NDTITPCPSCACGCE--NKKSCVKADS--KILTKKGLNTPKKDNTPLLQCTHHMCPVRVH 281

Query:   237 WHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYIND 296
             WHVK +Y  YWRVKI ITN N   N++ W L   HPNL +VTQVFSF+YKP++ YG IND
Sbjct:   282 WHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFSFDYKPVSPYGSIND 341

Query:   297 TGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDSGIFTFREGWGFPRRILFNGDECVMPLP 356
             TGMF+G +FYND+L++AG SGNVQ+E+LL KD   FTF++GW FPR++ FNGDEC++P P
Sbjct:   342 TGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAFPRKVYFNGDECMLPPP 401

Query:   357 DDYPRLPNNA 366
             D YP LPN+A
Sbjct:   402 DSYPFLPNSA 411

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2173547 COBL5 "COBRA-like protein 5 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 74/161 (45%), Positives = 98/161 (60%)

Query:     3 VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFTGGQLPHCCEKSPV 62
             V+ +NYQ  R I  PGWK++W     EVIWNM GA+ T QG CS F G  +P  C + P 
Sbjct:    50 VTAYNYQKQRSI--PGWKMSWRGTKKEVIWNMLGAKTTGQGGCSMFKGN-IPQSCVRKPT 106

Query:    63 IVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVG--GSADYTGFQMPENFTL 120
             +VDLLPG P+NQQ ANCCK GVL   ++      + FQ++VG  G++  T  +MP NF  
Sbjct:   107 VVDLLPGTPFNQQIANCCKSGVLKPGSE------SAFQLSVGSAGNSVKTA-RMPANFMF 159

Query:   121 GIPG--YTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIY 159
               P   Y CG +  V P++F +   RR T AL TWN+TC++
Sbjct:   160 TAPKQQYICGPSKNVRPTRFTTADKRRITAALMTWNITCVF 200

GO:0005886 "plasma membrane" evidence=ISM

GO:0050832 "defense response to fungus" evidence=IEP

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

TAIR|locus:2155889 SHV2 "SHAVEN 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 5.6e-26, P = 5.6e-26
 Identities = 86/289 (29%), Positives = 134/289 (46%)

Query:    57 CEKSPVIVDLLPGAPYNQQTAN---CCKGGVLSSLTQDPSKFVAGFQMNVGGSA-DYTGF 112
             CE+ P+I+DL P    +    N   CC+ G +     DPSK V+ F M V     D+   
Sbjct:   298 CERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRIMDPSKSVSVFTMQVAKMPPDFNRS 357

Query:   113 QM--PENFTL-GI--PGYTCGNATEVPPSKFYSD--GGRRRTQALRTWNVTCIYSQFMAS 165
              +  P+N+ + G   P Y+CG    V P+ FY D  G      +  +W + C  +Q   +
Sbjct:   358 ALFPPQNWRIKGTLNPDYSCGPPVRVTPT-FYPDPSGMPTNKSSFASWQIVCNITQ-AKT 415

Query:   166 SSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHD---PNKEQSP 222
               PKCCVS SAF+N++I+PC  C+C C   +   C    ETPSLL        P + ++ 
Sbjct:   416 EIPKCCVSFSAFFNDSIIPCNTCACGCVSETRRTCS--AETPSLLIPPDALLLPFENRTA 473

Query:   223 VVIC---SQHM-----------CPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLV 268
             + +     +H            C V ++WH+   Y   W V+ITI N   + ++  W L 
Sbjct:   474 LTLAWNALKHKTLPNPMPCGDNCGVSINWHMASDYRGGWTVRITIFNWGEI-DFPNWFLA 532

Query:   269 AL--HPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGE 315
                  P L    + +SFN   L+  G +N+T    G+   + ++ +A E
Sbjct:   533 VQMKKPALLGFEKAYSFNASLLSVDGGVNNTIFMEGLPGLDYLVAEADE 581

GO:0005886 "plasma membrane" evidence=ISM

GO:0009932 "cell tip growth" evidence=IMP

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0031225 "anchored to membrane" evidence=TAS

GO:0048765 "root hair cell differentiation" evidence=RCA;IMP

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2130100 COBL7 "AT4G16120" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
 Identities = 79/307 (25%), Positives = 130/307 (42%)

Query:    57 CEKSPVIVDLLPGAPYNQQTAN----CCKGGVLSSLTQDPSKFVAGFQMNV---GGSADY 109
             C + P ++DL P   YN  T      CC+ G +   + DPSK  + FQM V       + 
Sbjct:   299 CARRPTVIDL-PPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNI 357

Query:   110 TGFQMPENFTL-GI--PGYTCGNATEVPPSKFYSDGG--RRRTQALRTWNVTCIYSQFMA 164
             +    P+N+ + G   P Y CG    V PS+F    G    RT A  +W V C  +Q   
Sbjct:   358 SALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRT-AFASWQVVCNITQ-PK 415

Query:   165 SSSPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGETPSLLQQKHD---PNKEQS 221
              +SP+CCVS SA++N++IVPC  C+C C     A        PSLL  +     P + ++
Sbjct:   416 DASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACS-ATAPSLLLPQQALLVPFENRT 474

Query:   222 PVVICSQHM--------------CPVRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNL 267
              + +   ++              C V ++WH+   Y   W  ++T+ N         +  
Sbjct:   475 ELTVAWAYLKQRPVPNPMPCGDNCGVSINWHLATDYRGGWTARVTVFNWGETDFVDWFTA 534

Query:   268 VALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHK 327
             V +        + +SFN   +   G  N+T    G+   N ++ +      ++   +  K
Sbjct:   535 VQMKNAAPGFEKAYSFNASTIGINGK-NNTIFMEGLPGLNYLVAERDGENPLKNPRIPGK 593

Query:   328 DSGIFTF 334
                + +F
Sbjct:   594 QQSVMSF 600

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISS

TAIR|locus:2085785 COBL10 "COBRA-like protein 10 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 269 (99.8 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
 Identities = 85/305 (27%), Positives = 127/305 (41%)

Query:    57 CEKSPVIVDLLPGAPYNQQTAN---CCKGGVLSSLTQDPSKFVAGFQMNV---GGSADYT 110
             C++ P I DL P    +  T     CCK G L     DPSK  + FQ+ V       + T
Sbjct:   311 CQRKPAISDLPPEKKEDNMTGKLPFCCKNGTLLPPIMDPSKSRSMFQLQVFKLPPDLNRT 370

Query:   111 GFQMPENFTL-GI--PGYTCGNATEVPPSKFYSDGGRRR-TQALRTWNVTCIYSQFMASS 166
                 P+++ + G+  P Y CG    V PS+F    G    T A+ +W V C  ++  A +
Sbjct:   371 ALYPPQHWKIDGVLNPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQA 430

Query:   167 SPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGET----PSLLQQKHDPNKEQSP 222
             S +CCVS SAFYNN+ VPC  C+C C  +    C          P  L    D    ++ 
Sbjct:   431 S-RCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAK 489

Query:   223 VVICSQHM-------CP----VRVHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALH 271
                   HM       CP    V ++WHV   Y   W  ++T+ N      +  W  VA+ 
Sbjct:   490 AWAKQNHMPVPKKLPCPDNCGVSINWHVSTDYKNGWTARLTVFNWRDFA-FEDW-FVAID 547

Query:   272 PNLQS--VTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAGESGNVQTEMLLHKDS 329
                       V+SFN   +      N T +F G+   N ++ Q   +  ++   +  K  
Sbjct:   548 MGKAGPGYENVYSFNGTRVPPS---NRTVIFQGLPGMNYLVGQVNGTNPLRDPPVPGKQQ 604

Query:   330 GIFTF 334
              + +F
Sbjct:   605 SVISF 609

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2136452 COBL11 "COBRA-like protein 11 precursor" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
 Identities = 68/225 (30%), Positives = 101/225 (44%)

Query:    57 CEKSPVIVDLLPGAPYNQQTAN---CCKGGVLSSLTQDPSKFVAGFQMNV---GGSADYT 110
             C+K P+I DL      +  T     CCK G L     DPSK  A FQ+ V       + T
Sbjct:   301 CQKKPIIKDLPAERKDDNVTGKLPFCCKNGTLLPTHMDPSKSKAIFQLQVYKVPPDQNRT 360

Query:   111 GFQMPENFTL-GI--PGYTCGNATEVPPSKFYSDGG-RRRTQALRTWNVTCIYSQFMASS 166
              F  P N+ + GI  P Y CG    V  + F    G +  T A+ +W V C  ++    +
Sbjct:   361 AFFPPRNWKIDGIVNPTYKCGPPIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQA 420

Query:   167 SPKCCVSLSAFYNNTIVPCPKCSCHCQGLSPANCIKYGE-----TPSLLQQKHDPNKEQS 221
             + +CCVS SAFYN++ +PC  C+C C+ +    C          T +LL    D    ++
Sbjct:   421 A-RCCVSFSAFYNDSAIPCNTCACGCKDIDTDTCNANARQLLLPTDTLLVP-FDNRTLKA 478

Query:   222 PVVICSQHM-------CP----VRVHWHVKQSYTQYWRVKITITN 255
              V    +HM       CP    + ++WH+   Y   W  ++T+ N
Sbjct:   479 KVWAKQKHMAYPKKLPCPDNCGISLNWHLNSDYGNGWSARVTLFN 523

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0006944 "cellular membrane fusion" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6Z4G8	COBL1_ORYSJ	No assigned EC number	0.5805	0.9768	0.8497	yes	no
O04500	COBL6_ARATH	No assigned EC number	0.6502	0.9278	0.7929	yes	no
A2XHZ9	COBL5_ORYSI	No assigned EC number	0.5166	0.9742	0.8076	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.163.139.1 hypothetical protein (419 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	388
pfam04833	169	pfam04833, COBRA, COBRA-like protein	1e-80

>gnl|CDD|218285 pfam04833, COBRA, COBRA-like protein

 Score =  244 bits (625), Expect = 1e-80
 Identities = 96/165 (58%), Positives = 113/165 (68%), Gaps = 6/165 (3%)

Query: 3   VSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKF-TGGQLPHCCEKSP 61
           V++ NYQ YRHID PGWKL+W W   EVIW+M GA  TEQG+CSKF   G  PHCC+K P
Sbjct: 5   VTIENYQPYRHIDNPGWKLSWEWAKKEVIWSMRGAYTTEQGDCSKFYKDGDFPHCCKKRP 64

Query: 62  VIVDLLPGAPYNQQTANCCKGGVLSSLTQDPSKFVAGFQMNVGGSADYTG---FQMPENF 118
            IVDL PG PY+QQ ANCCK GVL   +QDP+K V+ FQM+VG +   T     + P+NF
Sbjct: 65  TIVDLPPGTPYDQQIANCCKNGVLLPRSQDPAKSVSAFQMSVGKAPPDTNRKTVRPPQNF 124

Query: 119 TLGI--PGYTCGNATEVPPSKFYSDGGRRRTQALRTWNVTCIYSQ 161
           T+    PGYTCG A  V P++F    GRR TQAL TW VTC YSQ
Sbjct: 125 TIKGPNPGYTCGPAVRVSPTRFPDPDGRRTTQALATWQVTCNYSQ 169

Family of plant proteins are designated COBRA-like (COBL) proteins. The 12 Arabidopsis members of the family are all GPI-liked. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect. Length = 169

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	388
PF04833	169	COBRA: COBRA-like protein; InterPro: IPR006918 In	100.0
PF00553	101	CBM_2: Cellulose binding domain; InterPro: IPR0019	86.22

>PF04833 COBRA: COBRA-like protein; InterPro: IPR006918 In Arabidopsis thaliana (Mouse-ear cress) members of the family are all extracellular glycosyl-phosphatidyl inositol-anchored proteins (GPI-linked) []

Probab=100.00  E-value=1.1e-81  Score=567.68  Aligned_cols=161  Identities=60%  Similarity=1.133  Sum_probs=155.2

Q ss_pred             CEEEEecCccccccCCCCCeeEEeecCCeeEEEeccceeeeeCCccccC-CCCCCcccCCCCeEEeCCCCCCCCcccccc
Q 040209            1 LRVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGNCSKFT-GGQLPHCCEKSPVIVDLLPGAPYNQQTANC   79 (388)
Q Consensus         1 ~~VTi~N~q~~r~i~~pgW~L~W~W~~~E~IwsM~GA~~~~qgdCs~~~-~~~~ph~C~k~P~IvDL~P~~~~d~qi~nC   79 (388)
                      .+|||+|||+|||||.|||+|||+|+|+||||+|+||||+|||||++|+ +.++||||+|+|+|||||||+|||+|++||
T Consensus         3 A~VTi~N~~~yr~id~pgW~L~W~W~~~E~IwsM~GA~~tdqgdCs~~~~~~~~ph~C~k~P~IvDLpp~~~~n~qi~nC   82 (169)
T PF04833_consen    3 AQVTISNYQPYRHIDNPGWNLGWTWAKKEFIWSMKGAQTTDQGDCSKFYKDGDFPHCCKKRPTIVDLPPGTPYNQQIGNC   82 (169)
T ss_pred             EEEEEecCCeecccCCCCceEeeEEcCCEEEEEeeCceeccCCcccccccCCCCCcccCCCCEEEeCCCCCCCccccccc
Confidence            3799999999999999999999999999999999999999999999988 445999999999999999999999999999


Q ss_pred             ccCCeeccCccCccCCceeEEEEEeec--CCC-CCcCCCcCeEecC--CceecCCCeeeCCCcccCCCCceeeeEeEEEe
Q 040209           80 CKGGVLSSLTQDPSKFVAGFQMNVGGS--ADY-TGFQMPENFTLGI--PGYTCGNATEVPPSKFYSDGGRRRTQALRTWN  154 (388)
Q Consensus        80 Cr~G~l~~~~~Dps~s~S~FQm~Vg~~--~~~-~~~~~P~nf~l~~--pgYtCg~p~~V~Pt~f~~p~g~r~t~Al~TWq  154 (388)
                      ||||||+||+|||+||+|+|||+||++  +++ ++++||+||+|++  |||+||+|++|+||+|+|+||||+||||||||
T Consensus        83 CrgG~l~~~~~Dps~s~S~FQm~Vg~~pp~~~~~~~~~P~nf~l~~~~pgYtCg~~~~V~pT~f~~~~g~r~t~A~~TWq  162 (169)
T PF04833_consen   83 CRGGVLSSWAQDPSKSVSAFQMSVGKAPPGTNNTTVKPPQNFTLGGPGPGYTCGPPKRVSPTVFPDPDGRRTTQALMTWQ  162 (169)
T ss_pred             cCCCEECCcccChhhCceEEEEEEeEeeccCCCceecCCcceEEcCCCCCcCCCCcceeCCceeeCCCCCEEEEEEEEEe
Confidence            999999999999999999999999999  556 9999999999999  56999999999999999999999999999999


Q ss_pred             eEeeeec
Q 040209          155 VTCIYSQ  161 (388)
Q Consensus       155 VtC~ysq  161 (388)
                      |||||||
T Consensus       163 vtC~ysq  169 (169)
T PF04833_consen  163 VTCNYSQ  169 (169)
T ss_pred             EEEEeeC
Confidence            9999997

The type example of the family is COBRA (Q94KT8 from SWISSPROT) and the family is generally annotated as COBRA-like (COBL). COBRA is involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. It may act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect [].

>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3

Probab=86.22  E-value=3.3  Score=34.41  Aligned_cols=97  Identities=20%  Similarity=0.268  Sum_probs=61.9

Q ss_pred             EeEEEeeCCCCceEEEEEEEecCCccCcccceEEeecCCCCCceeEEEecceeCCCCCcccceEEEEccchhhHHHhhcC
Q 040209          235 VHWHVKQSYTQYWRVKITITNLNVVQNYSQWNLVALHPNLQSVTQVFSFNYKPLNQYGYINDTGMFWGIEFYNDMLLQAG  314 (388)
Q Consensus       235 IhWHVk~nYk~~WrvkiTi~N~~~~~ny~dW~lvvqhpn~~~~~~vySFN~t~l~~y~~~NdT~m~~Gl~~yN~ll~e~g  314 (388)
                      +-.-|..+.-+++.+.|||+|=. .....+|.+-++.|.-.-+++++  |++.-    ...+++.+-+. .||-.|.   
T Consensus         3 v~~~v~~~W~~Gf~~~v~v~N~~-~~~i~~W~v~~~~~~~~~i~~~W--na~~s----~~g~~~~v~~~-~wn~~i~---   71 (101)
T PF00553_consen    3 VTYTVTNSWGGGFQGEVTVTNNG-SSPINGWTVTFTFPSGQTITSSW--NATVS----QSGNTVTVTNP-SWNGTIA---   71 (101)
T ss_dssp             EEEEEEEESSSEEEEEEEEEESS-SSTEESEEEEEEESTTEEEEEEE--SCEEE----EETTEEEEEES-STCSEEE---
T ss_pred             EEEEEecccCCCeEEEEEEEECC-CCccCCEEEEEEeCCCCEEeeee--ccEEE----ecCCEEEEEcC-CcCcccC---
Confidence            45567888999999999999966 46777999999998644455544  44421    12346666654 3443322   


Q ss_pred             CCCceeEEEEEeecCCCeeeeccCC--CceeeEeeCCcc
Q 040209          315 ESGNVQTEMLLHKDSGIFTFREGWG--FPRRILFNGDEC  351 (388)
Q Consensus       315 ~~G~vQSeilf~K~~~~ft~~~Gw~--FP~rVyFNGeeC  351 (388)
                       +|.- ..+       +|...+.-.  -|..+-|||..|
T Consensus        72 -~G~s-~~~-------Gf~~~~~~~~~~p~~~t~ng~~C  101 (101)
T PF00553_consen   72 -PGGS-VTF-------GFQASGSGSSAAPSTCTVNGAPC  101 (101)
T ss_dssp             -ESEE-EEE-------EEEEEESSS--SESEEEETTEEE
T ss_pred             -CCCe-EEE-------EEEEeCCCCCCCCcEEEEcCeeC
Confidence             1222 223       333333333  499999999998

2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	388
d1exha_	110	Exo-1,4-beta-D-glycanase (cellulase, xylanase), ce	82.7

>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]}

class: All beta proteins
fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
superfamily: Carbohydrate-binding domain
family: Cellulose-binding domain family II
domain: Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD
species: Cellulomonas fimi [TaxId: 1708]

Probab=82.70  E-value=0.7  Score=36.58  Aligned_cols=40  Identities=23%  Similarity=0.588  Sum_probs=32.7

Q ss_pred             EEEEecCccccccCCCCCeeEEeecCCeeEEEeccceeeeeCC
Q 040209            2 RVSLFNYQLYRHIDQPGWKLNWGWQGDEVIWNMWGAEATEQGN   44 (388)
Q Consensus         2 ~VTi~N~q~~r~i~~pgW~L~W~W~~~E~IwsM~GA~~~~qgd   44 (388)
                      .|||.|.-. .-|+  ||+|+|++..+|-|-++.+|..+..|+
T Consensus        24 ~vtVtN~~~-~~~~--gW~v~~~~p~g~~i~~~Wna~~~~~G~   63 (110)
T d1exha_          24 NVTVKNTSS-APVD--GWTLTFSFPSGQQVTQAWSSTVTQSGS   63 (110)
T ss_dssp             EEEEEECSS-SCEE--SEEEEEECSSCCEEEEEESSEEEEETT
T ss_pred             EEEEEeCCC-Cccc--CcEEEEECCCCCEEeeeeceEEEecCC
Confidence            588888766 4564  999999999999999999998766553