Citrus Sinensis ID: 040244

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
Protein Sequence
MASRKSYILVAFFVFLMGTEAVLAANNGNNSNGNGNNDGNGNKGDDNGNGHNGKGNGNANKGDDSRKGNKDKGNGKGNKRERMTILIQQIMMCLHHCLLDRKDIFAKTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPSGFASI
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccEEEEccccccccccEEEcccccccccccccccccccEEccccccccccccccccccccccccccccEEEcccccEEEEEccccccEEEEEccccEEEEEEEcccccccccccEEEEEEEEEEcccEEEEEEEEcccccccccEEEEEEccEEEEcccccccEEEEccccccEEEEEEccccEEEEEEccEEEEEEEEEEcccccccccccccccccccEEEEEEEEEEcccccEEccccccccccccccccccccccccccccccccccccccccccEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcHHEEEEcccccccccEEEEcccccccccccccccccEEEEEcccccccEEEEEcccccccccEcccccEEcccccEEEEEccccccEEEEEccccEEEEEEEcccccccccccHHHHHEEEEEcccEEEEEEEEcccccccccEEEEEEcccEEEcccccccEEEcccccccEEEEEEccccEEEEEEccEEEEEEEEEEcccccccEccccccccccEEEEEEEEEEEcccccccEEEccccccccccccccccccccccccccccccccccccccEEEEccccccccc
Coil and Loop (DISEMBL)
MASRKSYILVAFFVFLMGTEAVLAAnngnnsngngnndgngnkgddngnghngkgngnankgddsrkgnkdkgngkgnkrERMTILIQQIMMCLHHCLLDRKDIFAktlvcpaecpgkkpkknkrnkgcfvncgskceatckwrkpncdgygslcydprfvggdgvmfyfhgakggnfaivsddnlqinahfigtrpegrtrdyTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIrlngeavdiptggdaewktnADERQVLVertddtnnvRVKVAGLVELHIkvspigkeenkvhnyqlpdddafaHLETqfkftnlsdlvegvlgktyrpyyvspvkrgvpmpmmggedkyqtpslysphckacrfqspsgfasi
Flexible Loop (DISEMBL)
MASRKSYILVAFFVFLMGTEAVLAANNGNNSNGNGNNDGNGNKGDDNGNGHNGKGngnankgddsrkgnkdkgngkgnkreRMTILIQQIMMCLHHCLLDRKDIFAKTLVCPaecpgkkpkknkrnkgcfvncgskceatckwrkpncdGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFigtrpegrtRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEavdiptggdaewktnADERQVlvertddtnnvrvKVAGLVELHIkvspigkeenkVHNYQLPDDDAFAHLETQFKFtnlsdlvegvlgktyrpyyvspvkrgvpmpMMGGEDKYQTPSLYSPHCKACRFQspsgfasi
Low Complexity Region (SEG)
MASRKSYILVAFFVFLMGTEAVLAAnngnnsngngnndgngnkgddngnghngkgngnankgddsrkgnkdkgngkgnkRERMTILIQQIMMCLHHCLLDRKDIFAKTLVCPAEcpgkkpkknkrnkgcFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPSGFASI
Disordered region (IsUnstruct)
******YILVAFFVFLMGTEAVLA**********************************************************MTILIQQIMMCLHHCLLDRKDIFAKTLVCPAECP*********NKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGV***********************************
Disordered Region (DISOPRED)
*****SY**VAFFVFLMGTEAVL****************************************************************QQIMMCLHHCLLDRKDIFAKTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAE****ADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPS*****
Disordered Region (DISEMBL)
MASRKSYILVAFFVFLMGTEAVLAANNGNNSNGNGNNDGNGNKGDDNGNGHNGKGNGNAN******************KRERMTILIQQIMMCLHHCLLDRKDIFAKTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPSGFASI
Disordered Region (DISPRO)
***RKSYILVAFFVFLMGTEAVLAANN******************************************************RMTILIQQIMMCLHHCLLDRKDIFAKTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSP******
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASRKSYILVAFFVFLMGTEAVLAANNGNNSNGNGNNDGNGNKGDDNGNGHNGKGNGNANKGDDSRKGNKDKGNGKGNKRERMTILIQQIMMCLHHCLLDRKDIFAKTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPSGFASI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
224104655	343	predicted protein [Populus trichocarpa]	0.724	0.804	0.790	1e-131
388491458	393	unknown [Lotus japonicus]	0.719	0.697	0.762	1e-129
255578882	351	structural constituent of cell wall, put	0.721	0.783	0.752	1e-129
255578880	335	structural constituent of cell wall, put	0.874	0.994	0.618	1e-127
224104653	274	predicted protein [Populus trichocarpa]	0.711	0.989	0.785	1e-125
388501584	358	unknown [Medicago truncatula]	0.706	0.751	0.784	1e-124
357472233	386	hypothetical protein MTR_4g059630 [Medic	0.706	0.696	0.784	1e-124
225435287	368	PREDICTED: uncharacterized protein LOC10	0.734	0.760	0.739	1e-122
357472235	395	hypothetical protein MTR_4g059670 [Medic	0.706	0.681	0.766	1e-121
15239359	338	late embryogenesis abundant protein-like	0.732	0.825	0.734	1e-120

>gi|224104655|ref|XP_002313517.1| predicted protein [Populus trichocarpa] gi|222849925|gb|EEE87472.1| predicted protein [Populus trichocarpa]

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 219/277 (79%), Positives = 246/277 (88%), Gaps = 1/277 (0%)

Query: 106 AKTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDG 165
           +KTLVCP +C  +KP KNK+ KGCF+NC SKCE TCK+R+PNC+GYGSLCYDPRFVGGDG
Sbjct: 67  SKTLVCPDQCKVRKPVKNKKQKGCFINCSSKCEVTCKFRRPNCNGYGSLCYDPRFVGGDG 126

Query: 166 VMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANR 225
           VMFYFHGAKGGNFAIVSDDNLQINAHFIGTRP+GRTRD+TWVQAL++MFDTHTLVIAA R
Sbjct: 127 VMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPKGRTRDFTWVQALSIMFDTHTLVIAAKR 186

Query: 226 VMHWDDNVDALSIRLNGEAVD-IPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVE 284
           V  WDDN DAL+++ NG+ VD IPT GDAEW+ N +ER+V+VERTDDTN VRV+VA LVE
Sbjct: 187 VSKWDDNFDALTVKWNGQTVDNIPTDGDAEWRANGEEREVVVERTDDTNTVRVQVANLVE 246

Query: 285 LHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKR 344
           L+IKV PIGKEEN+ HNYQLP++DAFAHLETQFKF NL+DLVEGVLGKTYR  YVSPVK 
Sbjct: 247 LNIKVRPIGKEENRAHNYQLPENDAFAHLETQFKFFNLTDLVEGVLGKTYRAGYVSPVKI 306

Query: 345 GVPMPMMGGEDKYQTPSLYSPHCKACRFQSPSGFASI 381
           GVPMPMMGGEDKYQTPSLYSP C  CRFQ  SG A+I
Sbjct: 307 GVPMPMMGGEDKYQTPSLYSPLCNVCRFQPQSGTATI 343

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491458|gb|AFK33795.1| unknown [Lotus japonicus]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 209/274 (76%), Positives = 240/274 (87%)

Query: 107 KTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGV 166
           KTL CPAEC  +KPK NK+ KGCF++C SKCEATCK+RK  CDGYG+LCYDPRFVGGDGV
Sbjct: 112 KTLSCPAECQKRKPKNNKKAKGCFIDCSSKCEATCKFRKSKCDGYGALCYDPRFVGGDGV 171

Query: 167 MFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRV 226
           MFYFHGAKGGNFAI SDD  QINAHFIGTRPEGRTRDYTWVQAL+VMFDTHTLVIAANRV
Sbjct: 172 MFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQALSVMFDTHTLVIAANRV 231

Query: 227 MHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELH 286
             WDDNVD+L ++ +GE + +PT G+AEW+ N DER+V+VERTD+TNNVRV V+GL+E+ 
Sbjct: 232 SKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGDEREVVVERTDETNNVRVTVSGLLEMD 291

Query: 287 IKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGV 346
           I+V PIG++ENKVHNYQLP DDAFAHLETQF+F   +D +EG+LG+TYRP YVSPVKRGV
Sbjct: 292 IRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGILGQTYRPGYVSPVKRGV 351

Query: 347 PMPMMGGEDKYQTPSLYSPHCKACRFQSPSGFAS 380
           PMPMMGGEDKYQTP+LYS  CK CRF+ PSG AS
Sbjct: 352 PMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSAS 385

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578882|ref|XP_002530295.1| structural constituent of cell wall, putative [Ricinus communis] gi|223530193|gb|EEF32102.1| structural constituent of cell wall, putative [Ricinus communis]

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 207/275 (75%), Positives = 241/275 (87%)

Query: 107 KTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGV 166
           KTLVCP +C  +KP +NK+ KGCF++C SKCEATC+WR+PNC+GYGSLCYDPRFVGGDGV
Sbjct: 71  KTLVCPDQCKERKPAQNKKQKGCFIDCSSKCEATCRWRRPNCNGYGSLCYDPRFVGGDGV 130

Query: 167 MFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRV 226
           MFYFHG KGGNFAIVSDDNLQINAH IGTRP+GRTRD+TWVQAL++MFDTHTLVIAA +V
Sbjct: 131 MFYFHGEKGGNFAIVSDDNLQINAHLIGTRPQGRTRDFTWVQALSIMFDTHTLVIAAKKV 190

Query: 227 MHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELH 286
            HWD+N+DAL ++ +G  VDIPT G+AEW+TN +ER+V+VERTDD N VR  VA LVEL+
Sbjct: 191 AHWDNNIDALIVKWDGMVVDIPTDGEAEWRTNGEEREVVVERTDDANTVRTTVANLVELN 250

Query: 287 IKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGV 346
           IKV PIGKEEN++HNYQLP++DAFAHLETQFKF NL+DLVEGVLGKTYRP YVSPVK GV
Sbjct: 251 IKVRPIGKEENRIHNYQLPENDAFAHLETQFKFFNLTDLVEGVLGKTYRPDYVSPVKIGV 310

Query: 347 PMPMMGGEDKYQTPSLYSPHCKACRFQSPSGFASI 381
           PMPMMGGEDKY+ PS++SP C  CRFQ    F +I
Sbjct: 311 PMPMMGGEDKYRIPSIFSPLCSVCRFQRQFSFEAI 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578880|ref|XP_002530294.1| structural constituent of cell wall, putative [Ricinus communis] gi|223530192|gb|EEF32101.1| structural constituent of cell wall, putative [Ricinus communis]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/383 (61%), Positives = 276/383 (72%), Gaps = 50/383 (13%)

Query: 1   MASRKSYILVAFFVFLMGTEAVLAANNGNNSNGNGNNDGNGNKGDDNGNGHNGKGNGNAN 60
           MA  +S+I VAFFV L+  EA +    GN                               
Sbjct: 1   MAKVRSWIWVAFFVVLLVAEATIVQGAGN------------------------------- 29

Query: 61  KGDDSRKGNKDKGNGKGNKRERMTILIQQIMMCLHHCLLDRKDIFAKTLVCPAECPGKKP 120
             D S   ++ +    G +R R                  +   + KTL CPA+CP KKP
Sbjct: 30  --DKSEDFDEAEPLKTGQERARCKA---------------KGACYKKTLECPAQCPNKKP 72

Query: 121 KKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAI 180
            KNK+ KGC V+C SKCEATCKWRKPNC+GYGSLCYDPRFVGGDGVMFYFHGAKGGNFA+
Sbjct: 73  HKNKKQKGCHVDCSSKCEATCKWRKPNCNGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAV 132

Query: 181 VSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRL 240
           VSD+NLQINAHFIGTRP+GRTRD+TWVQAL+VMFDTH LVIAA +V  W+DN+DAL ++ 
Sbjct: 133 VSDNNLQINAHFIGTRPQGRTRDFTWVQALSVMFDTHNLVIAAKKVSTWNDNIDALIVKW 192

Query: 241 NGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVH 300
           +GEA+ IPT G AEW+ N +ER+V+VERTDDTN++R++VAGLVE+ IKV PIGK+EN VH
Sbjct: 193 DGEAISIPTDGQAEWRVNGEEREVVVERTDDTNSLRLRVAGLVEIDIKVRPIGKQENLVH 252

Query: 301 NYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTP 360
           NYQLPDDDAFAHLETQFKF NLSDLVEG+LGKTYRP YVSPVK GVPMPMMGGEDKYQTP
Sbjct: 253 NYQLPDDDAFAHLETQFKFKNLSDLVEGILGKTYRPDYVSPVKTGVPMPMMGGEDKYQTP 312

Query: 361 SLYSPHCKACRFQ--SPSGFASI 381
           SL SP CKACRFQ    +G A+I
Sbjct: 313 SLLSPLCKACRFQQSQSTGIATI 335

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104653|ref|XP_002313516.1| predicted protein [Populus trichocarpa] gi|222849924|gb|EEE87471.1| predicted protein [Populus trichocarpa]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/271 (78%), Positives = 248/271 (91%)

Query: 107 KTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGV 166
           K +VCPA+CP KKPKKNK++K CFV+C SKCE TCK+RKPNC+GYGSLCYDPRFVGGDGV
Sbjct: 4   KIVVCPAQCPEKKPKKNKKHKACFVDCSSKCEVTCKYRKPNCNGYGSLCYDPRFVGGDGV 63

Query: 167 MFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRV 226
           MFYFHGAKGGNFAIVSDDNLQINAHFIG+RP+GRTRD+TWVQAL+VMFD+H L+IAAN+V
Sbjct: 64  MFYFHGAKGGNFAIVSDDNLQINAHFIGSRPQGRTRDFTWVQALSVMFDSHNLIIAANKV 123

Query: 227 MHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELH 286
            HWDDNVD+L++R +GEA++IPT G+AEW+++++ERQV+VERTDDTN ++V VAGL+E+ 
Sbjct: 124 SHWDDNVDSLNVRWDGEAINIPTDGEAEWRSDSEERQVVVERTDDTNAMKVTVAGLLEMD 183

Query: 287 IKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGV 346
           IKV PIGK ENKVHNYQLPD+DAFAHLETQF+F NL+DLVEGVLGKTYRP YVSPVK GV
Sbjct: 184 IKVRPIGKHENKVHNYQLPDNDAFAHLETQFRFKNLTDLVEGVLGKTYRPDYVSPVKTGV 243

Query: 347 PMPMMGGEDKYQTPSLYSPHCKACRFQSPSG 377
           PMPMMGGEDKYQTPSL SP C+ CRFQ  S 
Sbjct: 244 PMPMMGGEDKYQTPSLLSPFCRLCRFQGASA 274

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388501584|gb|AFK38858.1| unknown [Medicago truncatula]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/269 (78%), Positives = 241/269 (89%)

Query: 108 TLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVM 167
           TLVCPAEC  +KPKKNK++KGCF++C SKCEATCK+R+ NCDGYGSLCYDPRFVGGDGVM
Sbjct: 81  TLVCPAECKTRKPKKNKKDKGCFIDCSSKCEATCKFRRANCDGYGSLCYDPRFVGGDGVM 140

Query: 168 FYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVM 227
           FYFHGAKGGNFAIVSDD  QINAHFIGTRP+GRTRDYTWVQAL++MFDTHTLVIAANRV 
Sbjct: 141 FYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALSLMFDTHTLVIAANRVT 200

Query: 228 HWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHI 287
            W+DNVD+L+++ +GE+V IPT  DAEWKTN DER+V+VERTDD N+VRV V+GL+E+ I
Sbjct: 201 QWNDNVDSLTVKWDGESVIIPTDDDAEWKTNGDEREVVVERTDDANSVRVTVSGLLEMDI 260

Query: 288 KVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVP 347
           +V PIG++ENK HNYQLP DDAFAHLETQFKF N +D +EGVLG+TYRP YVSPVKRGV 
Sbjct: 261 RVRPIGEKENKAHNYQLPSDDAFAHLETQFKFKNPTDSIEGVLGQTYRPSYVSPVKRGVA 320

Query: 348 MPMMGGEDKYQTPSLYSPHCKACRFQSPS 376
           MPMMGGEDKYQTPSL+S  CK CRFQ PS
Sbjct: 321 MPMMGGEDKYQTPSLFSTTCKLCRFQRPS 349

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357472233|ref|XP_003606401.1| hypothetical protein MTR_4g059630 [Medicago truncatula] gi|355507456|gb|AES88598.1| hypothetical protein MTR_4g059630 [Medicago truncatula]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/269 (78%), Positives = 241/269 (89%)

Query: 108 TLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGVM 167
           TLVCPAEC  +KPKKNK++KGCF++C SKCEATCK+R+ NCDGYGSLCYDPRFVGGDGVM
Sbjct: 109 TLVCPAECKTRKPKKNKKDKGCFIDCSSKCEATCKFRRANCDGYGSLCYDPRFVGGDGVM 168

Query: 168 FYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVM 227
           FYFHGAKGGNFAIVSDD  QINAHFIGTRP+GRTRDYTWVQAL++MFDTHTLVIAANRV 
Sbjct: 169 FYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALSLMFDTHTLVIAANRVT 228

Query: 228 HWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHI 287
            W+DNVD+L+++ +GE+V IPT  DAEWKTN DER+V+VERTDD N+VRV V+GL+E+ I
Sbjct: 229 QWNDNVDSLTVKWDGESVIIPTDDDAEWKTNGDEREVVVERTDDANSVRVTVSGLLEMDI 288

Query: 288 KVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVP 347
           +V PIG++ENK HNYQLP DDAFAHLETQFKF N +D +EGVLG+TYRP YVSPVKRGV 
Sbjct: 289 RVRPIGEKENKAHNYQLPSDDAFAHLETQFKFKNPTDSIEGVLGQTYRPSYVSPVKRGVA 348

Query: 348 MPMMGGEDKYQTPSLYSPHCKACRFQSPS 376
           MPMMGGEDKYQTPSL+S  CK CRFQ PS
Sbjct: 349 MPMMGGEDKYQTPSLFSTTCKLCRFQRPS 377

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435287|ref|XP_002282268.1| PREDICTED: uncharacterized protein LOC100265658 [Vitis vinifera] gi|297746242|emb|CBI16298.3| unnamed protein product [Vitis vinifera]

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/280 (73%), Positives = 240/280 (85%)

Query: 101 RKDIFAKTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRF 160
           R   + KTLVCP ECP +KPKKN++ KGCF++CGSKCE TCK+RK  C GYGSLCYDPRF
Sbjct: 82  RGACYFKTLVCPTECPQRKPKKNRKKKGCFIDCGSKCEVTCKYRKAKCTGYGSLCYDPRF 141

Query: 161 VGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLV 220
           +GGDGVMFYFHGAKGG+FAIVSDDNL INAHFIGTRP  RTRD+TWVQA +VMFDTHTLV
Sbjct: 142 IGGDGVMFYFHGAKGGDFAIVSDDNLHINAHFIGTRPATRTRDFTWVQAFSVMFDTHTLV 201

Query: 221 IAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVA 280
           IAA+RV HWDD+VDAL +R +GE V IPT G+AEW+ +  ER+V+VERTDDTN+VRV V 
Sbjct: 202 IAADRVSHWDDDVDALIVRWDGETVTIPTDGEAEWRVDCGEREVVVERTDDTNSVRVTVG 261

Query: 281 GLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVS 340
           GLVE+ ++V+P+G +EN+VHNYQLP DDAFAHLETQF F NL++ VEGVLGKTYRP YVS
Sbjct: 262 GLVEMDVRVTPVGADENRVHNYQLPADDAFAHLETQFSFKNLTESVEGVLGKTYRPGYVS 321

Query: 341 PVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPSGFAS 380
           PVKRGVPMP+MGGEDKY+TPSL+SP CK CRFQ   G  S
Sbjct: 322 PVKRGVPMPVMGGEDKYRTPSLFSPLCKLCRFQPQVGLTS 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357472235|ref|XP_003606402.1| hypothetical protein MTR_4g059670 [Medicago truncatula] gi|355507457|gb|AES88599.1| hypothetical protein MTR_4g059670 [Medicago truncatula]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/270 (76%), Positives = 242/270 (89%), Gaps = 1/270 (0%)

Query: 107 KTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDPRFVGGDGV 166
           KTLVCP EC  +KPKKNK++KGCF++C +KCEATCK+R+PNCDGYGSLCYDPRFVGGDGV
Sbjct: 118 KTLVCPEECKQRKPKKNKKDKGCFIDC-NKCEATCKFRRPNCDGYGSLCYDPRFVGGDGV 176

Query: 167 MFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRV 226
           MFYFHGAKGGNFAIVSDD+ QINAHFIGTRP+GRTRDYTWVQAL+VMFDTHTLVIAANRV
Sbjct: 177 MFYFHGAKGGNFAIVSDDDFQINAHFIGTRPQGRTRDYTWVQALSVMFDTHTLVIAANRV 236

Query: 227 MHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELH 286
             W+D VD+L+++ +GE V IP+ GDAEWK++ ++R+V+VERTDD N+VRV V+GL+E+ 
Sbjct: 237 TQWNDKVDSLTVKWDGELVTIPSDGDAEWKSSGNQREVIVERTDDANSVRVTVSGLLEMD 296

Query: 287 IKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGV 346
           I+V PIG++ENK HNYQLP DDAFAHLETQFKF N +D +EGVLG+TYRP YVSPVKRGV
Sbjct: 297 IRVRPIGEKENKAHNYQLPSDDAFAHLETQFKFKNPTDSIEGVLGQTYRPSYVSPVKRGV 356

Query: 347 PMPMMGGEDKYQTPSLYSPHCKACRFQSPS 376
            MPMMGGEDKYQTPSL+S  CK CRFQ PS
Sbjct: 357 AMPMMGGEDKYQTPSLFSTTCKLCRFQRPS 386

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239359|ref|NP_200860.1| late embryogenesis abundant protein-like protein [Arabidopsis thaliana] gi|9757754|dbj|BAB08235.1| unnamed protein product [Arabidopsis thaliana] gi|40823110|gb|AAR92259.1| At5g60520 [Arabidopsis thaliana] gi|332009956|gb|AED97339.1| late embryogenesis abundant protein-like protein [Arabidopsis thaliana]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/279 (73%), Positives = 235/279 (84%)

Query: 99  LDRKDIFAKTLVCPAECPGKKPKKNKRNKGCFVNCGSKCEATCKWRKPNCDGYGSLCYDP 158
           L R     K L CP ECP +KPK NK+ K CF++C SKCE TCKWRK NC+GYGSLCYDP
Sbjct: 54  LARGSCNQKILTCPKECPERKPKMNKKKKACFIDCSSKCEVTCKWRKANCNGYGSLCYDP 113

Query: 159 RFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHT 218
           RFVGGDGVMFYFHG K GNFAIVSD+NLQINAHFIGTRP GRTRD+TWVQA +VMFD+H 
Sbjct: 114 RFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPAGRTRDFTWVQAFSVMFDSHN 173

Query: 219 LVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVK 278
           LVIAA +V  WDD+VD+L +R NGE V++PT G+AEW+ + DER+V+VERTD+ NNVRV 
Sbjct: 174 LVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEAEWRIDLDEREVIVERTDERNNVRVT 233

Query: 279 VAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYY 338
           V+G+V++ I+V PIGKEE++VH YQLP DDAFAHLETQFKF NLSDLVEGVLGKTYRP Y
Sbjct: 234 VSGIVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKFFNLSDLVEGVLGKTYRPGY 293

Query: 339 VSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPSG 377
           VSPVK GVPMPMMGGEDKYQTPSL+SP C  CRFQ  +G
Sbjct: 294 VSPVKTGVPMPMMGGEDKYQTPSLFSPLCNVCRFQGKTG 332

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
TAIR|locus:2175193	338	AT5G60520 "AT5G60520" [Arabido	0.734	0.828	0.701	5.5e-109
TAIR|locus:2175198	439	AT5G60530 "AT5G60530" [Arabido	0.716	0.621	0.660	1.5e-104
TAIR|locus:2131714	341	AT4G27400 [Arabidopsis thalian	0.653	0.730	0.468	5.2e-65
TAIR|locus:2011010	347	AT1G54890 "AT1G54890" [Arabido	0.761	0.835	0.410	2.6e-63
TAIR|locus:2090674	559	AT3G19430 [Arabidopsis thalian	0.632	0.431	0.477	6.9e-63
TAIR|locus:2162555	337	AT5G54370 "AT5G54370" [Arabido	0.695	0.786	0.420	1.6e-61

TAIR|locus:2175193 AT5G60520 "AT5G60520" [Arabidopsis thaliana (taxid:3702)]

 Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
 Identities = 197/281 (70%), Positives = 225/281 (80%)

Query:    97 CLLDRKDIFAKTLVCPAEXXXXXXXXXXXXXXXFVNCGSKCEATCKWRKPNCDGYGSLCY 156
             CL  R     K L CP E               F++C SKCE TCKWRK NC+GYGSLCY
Sbjct:    53 CLA-RGSCNQKILTCPKECPERKPKMNKKKKACFIDCSSKCEVTCKWRKANCNGYGSLCY 111

Query:   157 DPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDT 216
             DPRFVGGDGVMFYFHG K GNFAIVSD+NLQINAHFIGTRP GRTRD+TWVQA +VMFD+
Sbjct:   112 DPRFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPAGRTRDFTWVQAFSVMFDS 171

Query:   217 HTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVR 276
             H LVIAA +V  WDD+VD+L +R NGE V++PT G+AEW+ + DER+V+VERTD+ NNVR
Sbjct:   172 HNLVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEAEWRIDLDEREVIVERTDERNNVR 231

Query:   277 VKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRP 336
             V V+G+V++ I+V PIGKEE++VH YQLP DDAFAHLETQFKF NLSDLVEGVLGKTYRP
Sbjct:   232 VTVSGIVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKFFNLSDLVEGVLGKTYRP 291

Query:   337 YYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPSG 377
              YVSPVK GVPMPMMGGEDKYQTPSL+SP C  CRFQ  +G
Sbjct:   292 GYVSPVKTGVPMPMMGGEDKYQTPSLFSPLCNVCRFQGKTG 332

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2175198 AT5G60530 "AT5G60530" [Arabidopsis thaliana (taxid:3702)]

 Score = 1005 (358.8 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
 Identities = 181/274 (66%), Positives = 217/274 (79%)

Query:   101 RKDIFAKTLVCPAEXXXXXXXXXXXXXXXFVNCGSKCEATCKWRKPNCDGYGSLCYDPRF 160
             R   + KTLVCP E               F++C +KCEATCKWRK NC+GYGSLCYDPRF
Sbjct:   156 RGSCYYKTLVCPGECPKRKPTKNKNTKGCFIDCTNKCEATCKWRKTNCNGYGSLCYDPRF 215

Query:   161 VGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLV 220
             VGGDGVMFYFHG+KGGNFAIVSD+NLQINAHFIGTRP GRTRD+TWVQAL VMF+ H LV
Sbjct:   216 VGGDGVMFYFHGSKGGNFAIVSDNNLQINAHFIGTRPVGRTRDFTWVQALNVMFENHKLV 275

Query:   221 IAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKT-NADERQVLVERTDDTNNVRVKV 279
             I ANRV  WD+  DA +IR +GE + +P    +EW+  +  ++ +++ERTD+ N+VRV V
Sbjct:   276 ITANRVNQWDETSDAFTIRYDGELITLPEDEQSEWREISGQKKDIIIERTDERNSVRVLV 335

Query:   280 AGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYV 339
             + LV++ I+V PIGKEEN+VHNYQLP DDAFAHLETQFKF +LS+LVEGVLGKTYRP YV
Sbjct:   336 SDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQFKFLDLSELVEGVLGKTYRPDYV 395

Query:   340 SPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQ 373
             S  K GVPMP++GGEDKYQTPSL+SP C+ CRF+
Sbjct:   396 SSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFK 429

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2131714 AT4G27400 [Arabidopsis thaliana (taxid:3702)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 118/252 (46%), Positives = 168/252 (66%)

Query:   130 FVNCGSK-CEATCKWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQI 188
             +V+C    CEA C+  KPNC+ YGS+C DPRF+GGDG++FYFHG    +F+IVSD + QI
Sbjct:    64 WVDCFKPLCEAVCRAVKPNCESYGSICLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQI 123

Query:   189 NAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIP 248
             NA F G RP GRTRD+TW+QAL  +F++H   +   +V  WD N+D L   ++G+ + IP
Sbjct:   124 NARFTGHRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIP 183

Query:   249 TGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDD 308
                 + W ++  ++ + +ER  + N+V V +    E+ + V P+ KE++++HNY+LP DD
Sbjct:   184 QETLSTWYSS--DKDIKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDD 241

Query:   309 AFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCK 368
              FAH E QFKF NLS  V+G+LG+TYRP + +P K GV MP++GGED ++T SL S  CK
Sbjct:   242 CFAHFEVQFKFINLSPKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCK 301

Query:   369 ACRFQSPSGFAS 380
              C F      AS
Sbjct:   302 TCLFSEDPAVAS 313

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2011010 AT1G54890 "AT1G54890" [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 122/297 (41%), Positives = 178/297 (59%)

Query:    85 ILIQQIMMCLHH--CLLDRKDIFAKTLVCPAEXXXXXXXXXXXXXXXFVNCGSK-CEATC 141
             I++ Q+   L    C   +   F K   CP +                ++C +  C+ATC
Sbjct:    21 IVVVQLEAALETKTCFQRKSPCFLKKQTCPKQCPSFSPPNGSTKACV-IDCFNPICKATC 79

Query:   142 KWRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRT 201
             + RKPNC+G GS C DPRF+GGDG++FYFHG +  +FA++SD + Q+NA FIG RP GR 
Sbjct:    80 RNRKPNCNGKGSACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIGLRPNGRA 139

Query:   202 RDYTWVQALAVMF--DTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNA 259
             RD+TW+Q+L ++F  ++ T  + A +   WD  VD L +   G+ + +P G  + W    
Sbjct:   140 RDFTWIQSLGLIFGPNSKTFSLEATKAEKWDHQVDHLRLSYEGKEISLPKGDTSVWSPPL 199

Query:   260 DERQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKF 319
              +  + +ERT D N+V V +  + E+ I V P+ KE++ +H Y +P+DD FAHLE QF+F
Sbjct:   200 GD-YIKIERTSDINSVLVTLQDIAEIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRF 258

Query:   320 TNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRFQSPS 376
               LS  VEGVLG+TY+  + +P K GV MP++GGEDKY+T SL    C AC +   S
Sbjct:   259 LKLSSNVEGVLGRTYKEDFKNPAKPGVAMPVVGGEDKYRTASLLETSCNACVYSGGS 315

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090674 AT3G19430 [Arabidopsis thaliana (taxid:3702)]

 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 117/245 (47%), Positives = 165/245 (67%)

Query:   132 NCGSKCEATCKWRKP--NCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQIN 189
             +C   C+  C   KP  NCD  GS+C DPRF+GGDG+ FYFHG K  NF ++SD NL IN
Sbjct:   282 DCPRSCQVDCVTCKPVCNCDKPGSVCQDPRFIGGDGLTFYFHGKKDSNFCLISDPNLHIN 341

Query:   190 AHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPT 249
             AHFIG R  G  RD+TWVQ++A++F TH L + A +   WDD+VD +++  +G  + +P 
Sbjct:   342 AHFIGKRRAGMARDFTWVQSIAILFGTHRLYVGALKTATWDDSVDRIAVSFDGNVISLPQ 401

Query:   250 GGDAEWKTNADER-QVLVERTD-DTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDD 307
                A W ++     +V V+R + DTNN+ V+V GL+++  +V PI  E++++H Y + +D
Sbjct:   402 LDGARWTSSPGVYPEVSVKRVNTDTNNLEVEVEGLLKITARVVPITMEDSRIHGYDVKED 461

Query:   308 DAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHC 367
             D  AHL+  FKF +LSD V+GVLG+TYR  YVS VK GV MP+MGG+ ++QT  L++P C
Sbjct:   462 DCLAHLDLGFKFQDLSDNVDGVLGQTYRSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDC 521

Query:   368 KACRF 372
              A RF
Sbjct:   522 SAARF 526

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2162555 AT5G54370 "AT5G54370" [Arabidopsis thaliana (taxid:3702)]

 Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
 Identities = 113/269 (42%), Positives = 167/269 (62%)

Query:   105 FAKTLVCPAEXXXXXXXXXXXXXXXFVNCGSK-CEATCKWRKPNCDGYGSLCYDPRFVGG 163
             + K + CP E               + +C    C++ C+ RKPNC+  GS CYDPRF+GG
Sbjct:    37 YRKYIRCPEECPSKTAMNSKNKVC-YADCDRPTCKSQCRMRKPNCNRPGSACYDPRFIGG 95

Query:   164 DGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAA 223
             DG++FYFHG     F++VSD +LQIN  FIG RP GR RD+TW+QAL  +F+++   + A
Sbjct:    96 DGIVFYFHGKSNEEFSLVSDSDLQINGRFIGHRPAGRARDFTWIQALGFLFNSNKFSLEA 155

Query:   224 NRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADERQVLVERTDDTNNVRVKVAGLV 283
              +   WD+ +D L    +G+ + +P    + W +    + + +ER    N+V V +    
Sbjct:   156 AKTASWDNEIDHLKFSYDGQDLSVPEETLSTWYS--PNKDIKIERVSMRNSVIVTIKDKA 213

Query:   284 ELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFKFTNLSDLVEGVLGKTYRPYYVSPVK 343
             E+ I V P+ KE++++H+Y++P DD FAHLE QF+F NLS  V+G+LG+TYRP + +P K
Sbjct:   214 EIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLSPKVDGILGRTYRPDFQNPAK 273

Query:   344 RGVPMPMMGGEDKYQTPSLYSPHCKACRF 372
              GV MP++GGED ++T SL S  CK C F
Sbjct:   274 PGVAMPVVGGEDSFKTSSLLSNDCKTCIF 302


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      381       312   0.00080  116 3  11 22  0.49    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  246 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.31u 0.10s 25.41t   Elapsed:  00:00:01
  Total cpu time:  25.31u 0.10s 25.41t   Elapsed:  00:00:01
  Start:  Fri May 10 09:20:12 2013   End:  Fri May 10 09:20:13 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_IX001432 hypothetical protein (343 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	381
pfam06830	57	pfam06830, Root_cap, Root cap	1e-27
PRK12678	672	PRK12678, PRK12678, transcription termination fact	0.004

>gnl|CDD|191617 pfam06830, Root_cap, Root cap

 Score =  103 bits (258), Expect = 1e-27
 Identities = 37/57 (64%), Positives = 42/57 (73%)

Query: 316 QFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRF 372
            FKF +LSD V GVLG+TYRP YV+PVK G  MP+MGGEDKY T SL+S  C   RF
Sbjct: 1   GFKFYDLSDDVHGVLGQTYRPDYVNPVKVGASMPVMGGEDKYATSSLFSADCAVARF 57

The cells at the periphery of the root cap are continuously sloughed off from the root into the mucilage, and are thought to be programmed to die.This family represents a conserved region approximately 60 residues in length within plant root cap proteins, which may be involved in the process. Length = 57

>gnl|CDD|237171 PRK12678, PRK12678, transcription termination factor Rho; Provisional

 Score = 38.7 bits (91), Expect = 0.004
 Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 2/59 (3%)

Query: 26  NNGNNSNGNGNNDGNGNKGDDNGNGHNGKGNGNANKGDDSRKG--NKDKGNGKGNKRER 82
            +           G  + GD  G              +   +G  + D G G+G +R R
Sbjct: 206 RDRREQGDRREERGRRDGGDRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRRGR 264

Length = 672

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	381
PF06830	57	Root_cap: Root cap; InterPro: IPR009646 The cells	100.0
PF06668	188	ITI_HC_C: Inter-alpha-trypsin inhibitor heavy chai	98.77
smart00216	162	VWD von Willebrand factor (vWF) type D domain. Von	97.92
PF00094	159	VWD: von Willebrand factor type D domain; InterPro	97.51
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	86.44

>PF06830 Root_cap: Root cap; InterPro: IPR009646 The cells at the periphery of the root cap are continuously sloughed off from the root into the mucilage, and are thought to be programmed to die []

Probab=100.00  E-value=1.7e-36  Score=231.62  Aligned_cols=57  Identities=68%  Similarity=1.218  Sum_probs=56.5

Q ss_pred             ceeeecCCcccccccceeecCCCcccCCCCcccccccCCCcccCCCcccCCCCceee
Q 040244          316 QFKFTNLSDLVEGVLGKTYRPYYVSPVKRGVPMPMMGGEDKYQTPSLYSPHCKACRF  372 (381)
Q Consensus       316 ~FKF~~LTd~V~GVLGQTYRpdyvn~vk~gv~MPvmGGe~~Y~tSsLfsaDC~v~rF  372 (381)
                      ||||++|||+|||||||||||||+||||+||+|||||||++|+|||||||||++|||
T Consensus         1 ~FkF~~Lt~~V~GVLGQTYr~~yvn~vk~g~~MPvmGG~~~y~ts~lfs~DC~v~rF   57 (57)
T PF06830_consen    1 QFKFYSLTDDVHGVLGQTYRPDYVNPVKVGVAMPVMGGEDKYRTSSLFSTDCAVCRF   57 (57)
T ss_pred             CceeeccccccceeccccccCCcccccccCCCCccccCCccceeccccccCcchhcC
Confidence            799999999999999999999999999999999999999999999999999999998

This family represents a conserved region approximately 60 residues in length within plant root cap proteins, which may be involved in the process.

>PF06668 ITI_HC_C: Inter-alpha-trypsin inhibitor heavy chain C-terminus; InterPro: IPR010600 This entry represents the C-terminal region of inter-alpha-trypsin inhibitor heavy chains

Probab=98.77  E-value=1.1e-07  Score=87.31  Aligned_cols=134  Identities=17%  Similarity=0.236  Sum_probs=95.8

Q ss_pred             cCCceeeeEEeeeCCC-CCCCCceeEEEEEEeecCeEEEEeeecccccCCCCCeeEEEECCeeeecCCCCCceeEeCCCC
Q 040244          183 DDNLQINAHFIGTRPE-GRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRLNGEAVDIPTGGDAEWKTNADE  261 (381)
Q Consensus       183 D~~LhINAHFIG~r~~-g~~RDfTWIQALGI~F~~H~l~i~A~k~a~Wd~~vD~l~vt~dGe~v~ip~~~~a~W~s~~~~  261 (381)
                      |..+.+|.++||..++ +..+--|+...|||.|+...+.|+.+        .++++|+=++....++=...+.-..    
T Consensus         1 ~sGi~VnGqliGak~~~~~~~~~TYF~~i~I~~~~~~~~I~vt--------~~~I~l~~g~~~~~l~w~~t~~~~~----   68 (188)
T PF06668_consen    1 DSGITVNGQLIGAKKPPGEKKLRTYFGRIGITFQKPDVKIEVT--------PEKITLTDGRRRSVLSWSDTASVKQ----   68 (188)
T ss_pred             CCCEEEeCEEccCCCCCCCCCCCceEEEEEEEECCCCeEEEEE--------ccEEEEecCCCceeEeEcceEEEcc----
Confidence            5789999999998543 38889999999999999888888888        6677776566666665333333332    


Q ss_pred             CCeEEEEecCCCeEEEEECCeEEEEEEEeeCccccCcccccCCCCcccccceeccee-eecCCcccccccceeecC-CCc
Q 040244          262 RQVLVERTDDTNNVRVKVAGLVELHIKVSPIGKEENKVHNYQLPDDDAFAHLETQFK-FTNLSDLVEGVLGKTYRP-YYV  339 (381)
Q Consensus       262 ~~l~V~Rt~~~N~V~V~l~g~~~I~~~VVPit~eDsriHnYgv~~dD~faHLdl~FK-F~~LTd~V~GVLGQTYRp-dyv  339 (381)
                      |+|.|+=.. .-.|.|++.+-+++.|-.-.+          --+.+.-.-||.+... =..||+.|||+|||-|++ +|.
T Consensus        69 ~~l~v~v~k-~~~l~v~~~~~v~F~Il~Hr~----------~~~~~~~~d~LGfYi~ds~~lS~~vhGLLGQF~~~~~~~  137 (188)
T PF06668_consen   69 PGLEVSVNK-NKNLTVTLGDGVTFVILLHRV----------WKKHPYQRDFLGFYILDSHGLSPSVHGLLGQFYHEPDFE  137 (188)
T ss_pred             CcEEEEEEC-CceEEEEeCCceEEEEEEEee----------cCCCCCCCCeeEEEecCCCCCCCcccccccCccCCCceE
Confidence            456665332 346999999999998865444          3333333447743322 268999999999999999 664

Inter-alpha-trypsin inhibitors are glycoproteins with a high inhibitory activity against trypsin, built up from different combinations of four polypeptides: bikunin and the three heavy chains that belong to this family (HC1, HC2, HC3). The heavy chains do not have any protease inhibitory properties but have the capacity to interact in vitro and in vivo with hyaluronic acid, which promotes the stability of the extra-cellular matrix. This domain is associated with the VWA domain IPR002035 from INTERPRO.; GO: 0004867 serine-type endopeptidase inhibitor activity, 0030212 hyaluronan metabolic process

>smart00216 VWD von Willebrand factor (vWF) type D domain

Probab=97.92  E-value=0.0006  Score=58.31  Aligned_cols=117  Identities=18%  Similarity=0.335  Sum_probs=78.1

Q ss_pred             CccCCCeEEccCCceEEEeecCCCceEEeec-C---CceeeeEEeeeCCCCCCCCceeEEEEEEeecCeEEEEeeecccc
Q 040244          153 SLCYDPRFVGGDGVMFYFHGAKGGNFAIVSD-D---NLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMH  228 (381)
Q Consensus       153 s~CgDPRFiGGDG~~FYFHGkkd~dFciVSD-~---~LhINAHFIG~r~~g~~RDfTWIQALGI~F~~H~l~i~A~k~a~  228 (381)
                      ++-+||+|+=.||.+|.|+|  .-.|.|+.| .   ++.|-++.....     .+-+|..++-|..+++.+.|...    
T Consensus        13 ~v~g~~~~~TFDg~~y~~~g--~C~yvL~~~~~~~~~f~V~~~~~~~~-----~~~~~~~~v~v~~~~~~i~~~~~----   81 (162)
T smart00216       13 SVSGDPHYTTFDGVAYTFPG--NCYYVLAQDCSSEPTFSVLLKNVPCG-----GGATCLKSVKVELNGDEIELKDD----   81 (162)
T ss_pred             EEcCCCCeECcCCCEEeecC--ceEEEEEEECCCCCCEEEEEEecCCC-----CCceEEEEEEEEECCEEEEEEeC----
Confidence            47899999999999999966  567999988 3   445555544221     12689999999999998777631    


Q ss_pred             cCCCCCeeEEEECCeeeecCCCCCc-e--eEeCCCCCCeEEEEecCCCeEEEEECCeEEEEEEEee
Q 040244          229 WDDNVDALSIRLNGEAVDIPTGGDA-E--WKTNADERQVLVERTDDTNNVRVKVAGLVELHIKVSP  291 (381)
Q Consensus       229 Wd~~vD~l~vt~dGe~v~ip~~~~a-~--W~s~~~~~~l~V~Rt~~~N~V~V~l~g~~~I~~~VVP  291 (381)
                            .++|++||+++.+|..... .  |...   ..+.|..+  .-.|.|..+|.-.|.|.+-|
T Consensus        82 ------~~~v~vng~~v~~p~~~~~~~v~~~~~---~~~~v~~~--~~gl~v~~dg~~~~~V~~~~  136 (162)
T smart00216       82 ------NGTVTVNGQQVSLPYKTSDGSIQIRSS---GGYVVVIT--SLGLQVTFDGLTLLSVQLPS  136 (162)
T ss_pred             ------CCEEEECCEEeeCCcCcCCceEEEEEC---ceEEEEEC--CCCEEEEECCCcEEEEEECH
Confidence                  6899999999999954322 1  2221   12333333  24566666655555555543

Von Willebrand factor contains several type D domains: D1 and D2 are present within the N-terminal propeptide whereas the remaining D domains are required for multimerisation.

>PF00094 VWD: von Willebrand factor type D domain; InterPro: IPR001846 A family of growth regulators (originally called cef10, connective tissue growth factor, fisp-12, cyr61, or, alternatively, beta IG-M1 and beta IG-M2), all belong to immediate-early genes expressed after induction by growth factors or certain oncogenes

Probab=97.51  E-value=0.0018  Score=53.83  Aligned_cols=82  Identities=17%  Similarity=0.325  Sum_probs=60.5

Q ss_pred             ccCCCeEEccCCceEEEeecCCCceE--EeecCC----ceeeeEEeeeCCCCCCCCceeEEEEEEeecCeEEEEeeeccc
Q 040244          154 LCYDPRFVGGDGVMFYFHGAKGGNFA--IVSDDN----LQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVM  227 (381)
Q Consensus       154 ~CgDPRFiGGDG~~FYFHGkkd~dFc--iVSD~~----LhINAHFIG~r~~g~~RDfTWIQALGI~F~~H~l~i~A~k~a  227 (381)
                      +-+||+|+=.||..|.|+|  ...|.  +++|..    +.+.++..  +.+.....-+++.+|.|.+.+|.+.|....  
T Consensus         3 v~g~~~~~TFDg~~y~~~~--~c~y~~vl~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~v~i~~~~~~i~i~~~~--   76 (159)
T PF00094_consen    3 VYGDPHITTFDGKSYSFPG--NCTYILVLAQDCSSDPKFSFSVENK--NCPCGQSGTSCTRKVTIRLGNHEIEIKPNN--   76 (159)
T ss_pred             EeCCCeEEcCCCCEEecCC--CceEEEEeecccCccccccccceee--eeccCCCCcceeeEEEEEcccceeeEeccc--
Confidence            4589999999999999999  56788  776633    33444321  112223333499999999999998887662  


Q ss_pred             ccCCCCCeeEEEECCeeeecC
Q 040244          228 HWDDNVDALSIRLNGEAVDIP  248 (381)
Q Consensus       228 ~Wd~~vD~l~vt~dGe~v~ip  248 (381)
                             .+.+++||+++.+|
T Consensus        77 -------~~~v~vng~~~~~p   90 (159)
T PF00094_consen   77 -------GDQVTVNGQPVSLP   90 (159)
T ss_pred             -------cceEEEeeecccCc
Confidence                   78999999999985

Sequence analysis of this family revealed the presence of four distinct modules. Each module has homologues in other extracellular mosaic proteins such as Von Willebrand factor, slit, thrombospondins, fibrillar collagens, IGF-binding proteins and mucins. Classification and analysis of these modules suggests the location of binding regions and, by analogy to better characterised modules in other proteins, sheds some light onto the structure of this new family []. The vWF domain is found in various plasma proteins: complement factors B, C2, CR3 and CR4; the integrins (I-domains); collagen types VI, VII, XII and XIV; and other extracellular proteins [, , ]. Although the majority of VWA-containing proteins are extracellular, the most ancient ones present in all eukaryotes are all intracellular proteins involved in functions such as transcription, DNA repair, ribosomal and membrane transport and the proteasome. A common feature appears to be involvement in multiprotein complexes. Proteins that incorporate vWF domains participate in numerous biological events (e.g. cell adhesion, migration, homing, pattern formation, and signal transduction), involving interaction with a large array of ligands []. A number of human diseases arise from mutations in VWA domains. Secondary structure prediction from 75 aligned vWF sequences has revealed a largely alternating sequence of alpha-helices and beta-strands []. One of the functions of von Willebrand factor (vWF) is to serve as a carrier of clotting factor VIII (FVIII). The native conformation of the D' domain of vWF is not only required for factor VIII (FVIII) binding but also for normal multimerisation and optimal secretion. The interaction between blood clotting factor VIII and VWF is necessary for normal survival of blood clotting factor VIII in blood circulation. The VWFD domain is a highly structured region, in which the first conserved Cys has been found to form a disulphide bridge with the second conserved one [].

>cd01951 lectin_L-type legume lectins

Probab=86.44  E-value=12  Score=34.14  Aligned_cols=96  Identities=24%  Similarity=0.295  Sum_probs=57.3

Q ss_pred             EccCCceEEEeecCCCceEEeecCCceeeeEEeeeCCCCCCCCceeEEEEEEeecCeEEEEeeecccccCCCCCeeEEEE
Q 040244          161 VGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPEGRTRDYTWVQALAVMFDTHTLVIAANRVMHWDDNVDALSIRL  240 (381)
Q Consensus       161 iGGDG~~FYFHGkkd~dFciVSD~~LhINAHFIG~r~~g~~RDfTWIQALGI~F~~H~l~i~A~k~a~Wd~~vD~l~vt~  240 (381)
                      .||||..|-|+......-.. +..     .--+|.     .  .- -+.|+|-||.|+=      ...||.+.+|+.|-+
T Consensus        70 ~~gdG~aF~l~~~~~~~~~~-~g~-----~~~lG~-----~--~~-~~~~aVefDT~~N------~~~~dp~~~higi~~  129 (223)
T cd01951          70 NGADGIAFVLQNDPAGALGG-GGG-----GGGLGY-----G--GI-GNSVAVEFDTYKN------DDNNDPNGNHISIDV  129 (223)
T ss_pred             CCCCcEEEEEecCCCCcccc-CCC-----CCccCc-----c--cc-CCeEEEEEecccc------CCCCCCCCCEEEEEc
Confidence            58999999998754321110 100     001111     1  11 2578999987731      223888899999999


Q ss_pred             CCeeee-----------cCCCCC-ceeEeCCCCCCeEEEEecCCCeEEEEECCe
Q 040244          241 NGEAVD-----------IPTGGD-AEWKTNADERQVLVERTDDTNNVRVKVAGL  282 (381)
Q Consensus       241 dGe~v~-----------ip~~~~-a~W~s~~~~~~l~V~Rt~~~N~V~V~l~g~  282 (381)
                      ++..-.           ++.... -+|.      .+.|+.....+.+.|+|.+.
T Consensus       130 n~~~~~~~~~~~~~~~~~~~~~~~g~~~------~v~I~Y~~~~~~L~v~l~~~  177 (223)
T cd01951         130 NGNGNNTALATSLGSASLPNGTGLGNEH------TVRITYDPTTNTLTVYLDNG  177 (223)
T ss_pred             CCCCCCcccccccceeeCCCccCCCCEE------EEEEEEeCCCCEEEEEECCC
Confidence            988532           111111 2333      37888888888999998765

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00