Citrus Sinensis ID: 040418

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
MAFKLPILLVSLLMIIIIIITSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKNNNSNSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY
ccccHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccEEEEEEEEEcccccEEEcccccccEEEEEEccccccccccccccccccEEEEEEEEEEEEEEEcccccccccEEEEEEcccccccccccccccccccccccccccccEEEEEEEcccccccccccccEEEEEccccccccEEEccccccccEEEEEcccccEEEEEEEEccccEEEEEEEEcccccccccEEEEEEccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccEEEccEEEEccccEEEEEcccccccccEccccccEEccccccccccccEEEEEEEEEEEEEEccccccccccEEEEEEEcccccccccHHHHcEEEEcccccccccEEEEEEEEccccccHcccccccEEEEEccccccccccccccccccccEEEEccccEEEEEEEccccEEEEEEEcccccccccccEEEEEEccHHHHccccc
MAFKLPILLVSLLMIIIIIITssaaakdknpsfiyngfrsanlsldgIAQFTSngllkltnetkgqighafypapipfknnnsnsstangtvfSFSTTFVFSILSEFHTTLSAHGIAFviaptrglpgarpsqylglfnesnlgnetnhVFAVELdtienhefsdindnhvgidinslkseisypagyygdhfvnltlisgrpmqvwveydglekrtnvtlapinipkprlpllsLSRDLSSVLNDAMY
MAFKLPILLVSLLMIIIIIITssaaakdknpSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKNNNSNSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKrtnvtlapinipkprlpllslsrdlssvlndamy
MAFKlpillvsllmiiiiiiTSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKnnnsnssTANGtvfsfsttfvfsILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKprlpllslsrdlssvlNDAMY
**FKLPILLVSLLMIIIIIITSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFK********ANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPL****************
*****PILLVSLLMIIIIIITSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKNN********GTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRG******SQ**GLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY
MAFKLPILLVSLLMIIIIIITSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKNNNSNSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY
**FKLPILLVSLLMIIIIIITSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKNNNSNSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAM*
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAFKLPILLVSLLMIIIIIITSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKNNNSNSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query249 2.2.26 [Sep-21-2011]
O80939 675 L-type lectin-domain cont yes no 0.831 0.306 0.603 1e-61
Q9M345 677 L-type lectin-domain cont no no 0.883 0.324 0.550 1e-59
O81291 669 L-type lectin-domain cont no no 0.835 0.310 0.588 2e-58
Q9SZD5 669 L-type lectin-domain cont no no 0.879 0.327 0.504 5e-58
O81292 674 L-type lectin-domain cont no no 0.843 0.311 0.538 8e-52
O04534 666 Putative L-type lectin-do no no 0.811 0.303 0.521 9e-52
Q9M2S4 684 L-type lectin-domain cont no no 0.835 0.304 0.497 1e-48
Q9ZW09 627 Probable inactive L-type no no 0.907 0.360 0.443 6e-47
Q9ZW11 623 Putative inactive L-type no no 0.927 0.370 0.433 6e-46
O22834 664 Probable L-type lectin-do no no 0.751 0.281 0.517 1e-42
>sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1 Back     alignment and function desciption
 Score =  236 bits (602), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/217 (60%), Positives = 153/217 (70%), Gaps = 10/217 (4%)

Query: 36  NGFRS-ANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKNNNSNSSTANGTVFS 94
           NGF    +LS+ GI   T NGLLKLTN T  + GHAFY  PI FK+      + NGTV S
Sbjct: 31  NGFNPPTDLSIQGITTVTPNGLLKLTNTTVQKTGHAFYTKPIRFKD------SPNGTVSS 84

Query: 95  FSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVE 154
           FST+FVF+I S+    LS HGIAFV+AP   LP   PSQY+GLFN +N GNETNHVFAVE
Sbjct: 85  FSTSFVFAIHSQI-AILSGHGIAFVVAPNASLPYGNPSQYIGLFNLANNGNETNHVFAVE 143

Query: 155 LDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGD--HFVNLTLISGRPMQVWVEYDG 212
           LDTI + EF+D NDNHVGIDINSLKS  S PAGY+ +   F NLTLIS +PMQVWV+YDG
Sbjct: 144 LDTILSTEFNDTNDNHVGIDINSLKSVQSSPAGYWDEKGQFKNLTLISRKPMQVWVDYDG 203

Query: 213 LEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY 249
              + +VT+AP N  KP  PL++  RDLSSVL   MY
Sbjct: 204 RTNKIDVTMAPFNEDKPTRPLVTAVRDLSSVLLQDMY 240

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|Q9M345|LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1 Back     alignment and function description
>sp|O81291|LRK44_ARATH L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana GN=LECRK44 PE=3 SV=1 Back     alignment and function description
>sp|Q9SZD5|LRK59_ARATH L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 PE=2 SV=1 Back     alignment and function description
>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1 Back     alignment and function description
>sp|O04534|LRK51_ARATH Putative L-type lectin-domain containing receptor kinase V.1 OS=Arabidopsis thaliana GN=LECRK51 PE=3 SV=1 Back     alignment and function description
>sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana GN=LECRKS4 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZW09|LRK31_ARATH Probable inactive L-type lectin-domain containing receptor kinase III.1 OS=Arabidopsis thaliana GN=LECRK31 PE=3 SV=1 Back     alignment and function description
>sp|Q9ZW11|LRK32_ARATH Putative inactive L-type lectin-domain containing receptor kinase III.2 OS=Arabidopsis thaliana GN=LECRK32 PE=3 SV=1 Back     alignment and function description
>sp|O22834|LRK53_ARATH Probable L-type lectin-domain containing receptor kinase V.3 OS=Arabidopsis thaliana GN=LECRK53 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
356567974 667 PREDICTED: L-type lectin-domain containi 0.935 0.349 0.605 9e-77
356520929 667 PREDICTED: L-type lectin-domain containi 0.935 0.349 0.609 2e-76
31324528 641 receptor kinase Lecrk [Gossypium hirsutu 0.867 0.336 0.663 1e-75
224110964 623 predicted protein [Populus trichocarpa] 0.907 0.362 0.605 3e-73
297740334 618 unnamed protein product [Vitis vinifera] 0.843 0.339 0.650 5e-73
359481749 1258 PREDICTED: L-type lectin-domain containi 0.855 0.169 0.641 6e-73
147808029 616 hypothetical protein VITISV_019444 [Viti 0.855 0.345 0.641 9e-73
255588220 669 kinase, putative [Ricinus communis] gi|2 0.931 0.346 0.607 2e-69
38112427 669 lectin-like receptor kinase 7;2 [Medicag 0.915 0.340 0.619 2e-69
449448894 678 PREDICTED: L-type lectin-domain containi 0.927 0.340 0.604 1e-65
>gi|356567974|ref|XP_003552189.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Glycine max] Back     alignment and taxonomy information
 Score =  292 bits (747), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 146/241 (60%), Positives = 185/241 (76%), Gaps = 8/241 (3%)

Query: 10  VSLLMIIIIIITSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKGQIGH 69
           +SL ++ ++ + ++      + SF YNGF+S+ L LDG A+FT+NG+LKLTN TK Q GH
Sbjct: 1   MSLKVVTVVFLLATIVVASDDTSFTYNGFQSSYLYLDGSAEFTTNGMLKLTNHTKQQKGH 60

Query: 70  AFYPAPIPFKNNNSNSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGA 129
           AF+P+PI FKN      T +G+VFSFSTTFVF+I SEF   LS HGI FV++PT+G+P +
Sbjct: 61  AFFPSPIVFKN------TTSGSVFSFSTTFVFAIRSEF-PNLSGHGIVFVVSPTKGVPHS 113

Query: 130 RPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYY 189
            PSQYLGLF+++N GN +NH+F VELDTI N EF DINDNHVG+D+N LKS  S  AGYY
Sbjct: 114 LPSQYLGLFDDTNNGNNSNHIFGVELDTILNTEFGDINDNHVGVDVNELKSVKSAAAGYY 173

Query: 190 GDH-FVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAM 248
            D  F NL+LISG PMQVWVEYDGL+K+ +VTLAPIN+ KP  PLLSLS+DLS +LN +M
Sbjct: 174 SDEGFKNLSLISGYPMQVWVEYDGLKKQIDVTLAPINVGKPEGPLLSLSKDLSPILNSSM 233

Query: 249 Y 249
           Y
Sbjct: 234 Y 234

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356520929|ref|XP_003529112.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Glycine max] Back     alignment and taxonomy information
>gi|31324528|gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224110964|ref|XP_002333003.1| predicted protein [Populus trichocarpa] gi|222834498|gb|EEE72975.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297740334|emb|CBI30516.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359481749|ref|XP_003632669.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147808029|emb|CAN77672.1| hypothetical protein VITISV_019444 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255588220|ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|223525084|gb|EEF27843.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|38112427|gb|AAR11299.1| lectin-like receptor kinase 7;2 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449448894|ref|XP_004142200.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.2-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
TAIR|locus:2040681 675 RLK "receptor lectin kinase" [ 0.763 0.281 0.557 6.7e-49
TAIR|locus:2084375 677 AT3G53810 [Arabidopsis thalian 0.787 0.289 0.502 2.7e-45
TAIR|locus:2133239 669 AT4G02420 [Arabidopsis thalian 0.730 0.272 0.543 7.8e-44
TAIR|locus:2119936 669 AT4G29050 [Arabidopsis thalian 0.795 0.295 0.440 4.5e-42
TAIR|locus:2133229 674 LPK1 "lectin-like protein kina 0.742 0.274 0.494 9.1e-40
TAIR|locus:2099941 684 AT3G55550 [Arabidopsis thalian 0.742 0.270 0.451 4.6e-37
TAIR|locus:2020608 666 AT1G70110 [Arabidopsis thalian 0.787 0.294 0.433 1.1e-36
TAIR|locus:2043939 664 AT2G43690 [Arabidopsis thalian 0.674 0.253 0.477 1.8e-36
TAIR|locus:2043162 627 AT2G29220 [Arabidopsis thalian 0.795 0.315 0.406 6.1e-36
TAIR|locus:2085587 669 AT3G45440 [Arabidopsis thalian 0.465 0.173 0.487 1.8e-33
TAIR|locus:2040681 RLK "receptor lectin kinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 112/201 (55%), Positives = 130/201 (64%)

Query:    32 SFIYN-GFRS-ANLSLDGIAQFTSNGLLKLTNETKGQIGHAFYPAPIPFKXXXXXXXTAN 89
             +F YN GF    +LS+ GI   T NGLLKLTN T  + GHAFY  PI FK       + N
Sbjct:    26 NFAYNNGFNPPTDLSIQGITTVTPNGLLKLTNTTVQKTGHAFYTKPIRFKD------SPN 79

Query:    90 GXXXXXXXXXXXXILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNH 149
             G            I S+    LS HGIAFV+AP   LP   PSQY+GLFN +N GNETNH
Sbjct:    80 GTVSSFSTSFVFAIHSQI-AILSGHGIAFVVAPNASLPYGNPSQYIGLFNLANNGNETNH 138

Query:   150 VFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGD--HFVNLTLISGRPMQVW 207
             VFAVELDTI + EF+D NDNHVGIDINSLKS  S PAGY+ +   F NLTLIS +PMQVW
Sbjct:   139 VFAVELDTILSTEFNDTNDNHVGIDINSLKSVQSSPAGYWDEKGQFKNLTLISRKPMQVW 198

Query:   208 VEYDGLEKRTNVTLAPINIPK 228
             V+YDG   + +VT+AP N  K
Sbjct:   199 VDYDGRTNKIDVTMAPFNEDK 219
GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0009751 "response to salicylic acid stimulus" evidence=IEP
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006995 "cellular response to nitrogen starvation" evidence=RCA
GO:0009617 "response to bacterium" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0035304 "regulation of protein dephosphorylation" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0045088 "regulation of innate immune response" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133239 AT4G02420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119936 AT4G29050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133229 LPK1 "lectin-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099941 AT3G55550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020608 AT1G70110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043939 AT2G43690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043162 AT2G29220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085587 AT3G45440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00021359001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (667 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
cd06899236 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume 1e-86
pfam00139231 pfam00139, Lectin_legB, Legume lectin domain 5e-86
cd01951223 cd01951, lectin_L-type, legume lectins 2e-18
>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information 
 Score =  256 bits (657), Expect = 1e-86
 Identities = 106/222 (47%), Positives = 135/222 (60%), Gaps = 16/222 (7%)

Query: 32  SFIYNGFRS--ANLSLDGIAQFTSNGLLKLTNETKG--QIGHAFYPAPIPFKNNNSNSST 87
           SF +NGF S  +NL+L G A  +SNG L+LTN+T     +G A Y  P+   ++      
Sbjct: 2   SFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDS------ 55

Query: 88  ANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNET 147
             G V SFST+F FSI    + +L   G+AF +APT  LP A    YLGLFN SN GN +
Sbjct: 56  TTGKVASFSTSFSFSITPP-NPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSS 114

Query: 148 NHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVW 207
           NH+ AVE DT +N EF D +DNHVGID+NSL S     AGY+ D      L SG+PMQ W
Sbjct: 115 NHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSV---KAGYWDD--DGGKLKSGKPMQAW 169

Query: 208 VEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY 249
           ++YD   KR +VTLA   + KP+ PLLS   DLS VL + +Y
Sbjct: 170 IDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVY 211

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236
>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain Back     alignment and domain information
>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 249
cd06899236 lectin_legume_LecRK_Arcelin_ConA legume lectins, l 100.0
PF00139236 Lectin_legB: Legume lectin domain; InterPro: IPR00 100.0
cd01951223 lectin_L-type legume lectins. The L-type (legume-t 100.0
cd07308218 lectin_leg-like legume-like lectins: ERGIC-53, ERG 99.79
cd06901248 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr 99.49
cd06902225 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran 99.37
cd06903215 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem 99.15
PF03388229 Lectin_leg-like: Legume-like lectin family; InterP 98.93
cd06900255 lectin_VcfQ VcfQ bacterial pilus biogenesis protei 98.44
KOG3838 497 consensus Mannose lectin ERGIC-53, involved in gly 97.67
KOG3839351 consensus Lectin VIP36, involved in the transport 97.66
PF0717295 GRP: Glycine rich protein family; InterPro: IPR010 80.73
>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information 
Probab=100.00  E-value=5.6e-52  Score=365.18  Aligned_cols=207  Identities=49%  Similarity=0.763  Sum_probs=185.1

Q ss_pred             ceEEeCCCCC--CCeEEeeceEECcCCeEEccCCC--CCeEEEEEecCceeccCCCCCCCCCCCeeeeEEEEEEEEEeec
Q 040418           31 PSFIYNGFRS--ANLSLDGIAQFTSNGLLKLTNET--KGQIGHAFYPAPIPFKNNNSNSSTANGTVFSFSTTFVFSILSE  106 (249)
Q Consensus        31 ~sF~f~~F~~--~~l~l~G~A~~~~~g~l~LT~~~--~~~~Grv~y~~Pv~l~d~~~~~~~~t~~~asFsT~F~F~I~~~  106 (249)
                      ++|+|++|..  ++|+++|+|.+..++.|+||++.  .+++|||||++||+||++.      +++++||+|+|+|.|.+.
T Consensus         1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~------~~~~~sFst~F~F~i~~~   74 (236)
T cd06899           1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDST------TGKVASFSTSFSFSITPP   74 (236)
T ss_pred             CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCC------CCCceeEEEEEEEEEEcC
Confidence            4799999986  79999999999658999999998  8999999999999999987      889999999999999986


Q ss_pred             cccCccccceEEEEccCCCCCCCCCCCcccCCcCCCCCCCCCcEEEEEEecCccCCCCCCCCCeeEEEcCCCcccccccC
Q 040418          107 FHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPA  186 (249)
Q Consensus       107 ~~~~~~gdGlAFvl~p~~~~p~~s~Gg~LGl~n~~~~~~~~~~~vAVEFDT~~n~~~~Dp~~nHVgIdvns~~S~~t~~~  186 (249)
                       ....+||||||+|+|....+.+..|++|||.+.++.+...++.|||||||++|.+++||+.+|||||+|++.|..+..+
T Consensus        75 -~~~~~gdGlAF~i~~~~~~~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHigIdvn~~~S~~~~~~  153 (236)
T cd06899          75 -NPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAGYW  153 (236)
T ss_pred             -CCCCCCCeEEEEEecCCCCCCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCCCeEEEEcCCcccceeecc
Confidence             4567899999999998755557889999999887666677899999999999998889999999999999988877665


Q ss_pred             CccCCCcccccccCCcceEEEEEEeCCCcEEEEEEeeCCCCCCCCceeeEEecCCcccCccCC
Q 040418          187 GYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY  249 (249)
Q Consensus       187 ~~~~~~~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~p~~p~ls~~vdLs~~l~e~vy  249 (249)
                      ..     ..++|.+|+.|+|||+||+.+++|+|+|+..+..||..|+|++++||+++|||+||
T Consensus       154 ~~-----~~~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~  211 (236)
T cd06899         154 DD-----DGGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVY  211 (236)
T ss_pred             cc-----ccccccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceE
Confidence            31     24458899999999999999999999999887668999999999999999999986

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin
>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported Back     alignment and domain information
>cd01951 lectin_L-type legume lectins Back     alignment and domain information
>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 Back     alignment and domain information
>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain Back     alignment and domain information
>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates Back     alignment and domain information
>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain Back     alignment and domain information
>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
3usu_B242 Crystal Structure Of Butea Monosperma Seed Lectin L 6e-12
3usu_A256 Crystal Structure Of Butea Monosperma Seed Lectin L 8e-12
3ipv_B239 Crystal Structure Of Spatholobus Parviflorus Seed L 8e-11
3ipv_A251 Crystal Structure Of Spatholobus Parviflorus Seed L 2e-10
2fmd_A240 Structural Basis Of Carbohydrate Recognition By Bow 4e-10
1g8w_A233 Improved Structure Of Phytohemagglutinin-L From The 6e-09
1fat_A252 Phytohemagglutinin-L Length = 252 7e-09
1gz9_A239 High-Resolution Crystal Structure Of Erythrina Cris 9e-09
1bjq_A253 The Dolichos Biflorus Seed Lectin In Complex With A 1e-08
1lul_A253 Db58, A Legume Lectin From Dolichos Biflorus Length 2e-08
1dbn_A239 Maackia Amurensis Leukoagglutinin (Lectin) With Sia 4e-08
1avb_A226 Arcelin-1 From Phaseolus Vulgaris L Length = 226 5e-08
1uzy_A242 Erythrina Crystagalli Lectin Length = 242 8e-08
3n35_A242 Erythrina Corallodendron Lectin Mutant (Y106g) With 8e-08
3ujo_A281 Galactose-Specific Seed Lectin From Dolichos Lablab 9e-08
1lte_A239 Structure Of A Legume Lectin With An Ordered N-Link 9e-08
1sfy_A239 Crystal Structure Of Recombinant Erythrina Corallod 9e-08
1fyu_A255 Crystal Structure Of Erythrina Corallodendron Lecti 1e-07
1ax0_A239 Erythrina Corallodendron Lectin In Complex With N-A 1e-07
1bzw_A232 Peanut Lectin Complexed With C-Lactose Length = 232 3e-07
2pel_A236 Peanut Lectin Length = 236 3e-07
2lal_A181 Crystal Structure Determination And Refinement At 2 3e-07
1fny_A237 Legume Lectin Of The Bark Of Robinia Pseudoacacia. 4e-07
3zvx_A261 Structure Of The Lectin From Platypodium Elegans In 6e-07
2sba_A253 Soybean Agglutinin Complexed With 2,6-Pentasacchari 1e-06
1lgc_A181 Interaction Of A Legume Lectin With The N2 Fragment 2e-06
1lgb_A181 Interaction Of A Legume Lectin With The N2 Fragment 2e-06
1lof_C181 X-Ray Structure Of A Biantennary Octasaccharide-Lec 2e-06
1loa_A181 Three-Dimensional Structures Of Complexes Of Lathyr 2e-06
2ltn_A181 Design, Expression, And Crystallization Of Recombin 2e-06
1ofs_A187 Pea Lectin-sucrose Complex Length = 187 2e-06
2bqp_A234 The Structure Of The Pea Lectin-D-Glucopyranose Com 2e-06
1rin_A180 X-Ray Crystal Structure Of A Pea Lectin-Trimannosid 3e-06
1hql_A257 The Xenograft Antigen In Complex With The B4 Isolec 4e-06
1gnz_A257 Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m 4e-06
1fay_A238 Winged Bean Acidic Lectin Complexed With Methyl-Alp 5e-06
1qnw_A242 Lectin Ii From Ulex Europaeus Length = 242 4e-05
2b7y_A182 Fava Bean Lectin-Glucose Complex Length = 182 5e-05
1n47_A233 Isolectin B4 From Vicia Villosa In Complex With The 8e-05
1wbl_A241 Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga 2e-04
2e7q_A237 Crystal Structure Of Basic Winged Bean Lectin In Co 2e-04
1wbf_A242 Winged Bean Lectin, Saccharide Free Form Length = 2 2e-04
1gsl_A243 Lectin (Fourth Isolated From (Griffonia Simplicifol 4e-04
1fx5_A242 Crystal Structure Analysis Of Ulex Europaeus Lectin 8e-04
2eig_A234 Lotus Tetragonolobus Seed Lectin (Isoform) Length = 8e-04
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242 Back     alignment and structure 
Iteration: 1

 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 85/192 (44%), Gaps = 27/192 (14%)
Query: 32  SFIYNGFR--SANLSLDGIAQFTSNGLLKLTNETKG------QIGHAFYPAPIPFKXXXX 83
           SF ++ F+    NL   G A  TS+G L+LT   K        +G A Y +PI       
Sbjct: 6   SFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPI------N 59
Query: 84  XXXTANGXXXXXXXXXXXXILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNL 143
              +  G            I +    T+ A G+AF +AP    P A  + +LGLF +S +
Sbjct: 60  IWDSKTGVVASFATSFRFTIYAPNIATI-ADGLAFFLAPVSSPPKAG-AGFLGLF-DSAV 116
Query: 144 GNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRP 203
            N +    AVE DT EN  F D  D H+GID+NS+KS  +          V   L +G  
Sbjct: 117 FNSSYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKT----------VKWDLANGEA 166
Query: 204 MQVWVEYDGLEK 215
            +V + YD   K
Sbjct: 167 AKVLITYDSSAK 178
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256 Back     alignment and structure
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239 Back     alignment and structure
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251 Back     alignment and structure
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240 Back     alignment and structure
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233 Back     alignment and structure
>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252 Back     alignment and structure
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239 Back     alignment and structure
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253 Back     alignment and structure
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253 Back     alignment and structure
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239 Back     alignment and structure
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226 Back     alignment and structure
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242 Back     alignment and structure
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242 Back     alignment and structure
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281 Back     alignment and structure
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239 Back     alignment and structure
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239 Back     alignment and structure
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255 Back     alignment and structure
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239 Back     alignment and structure
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232 Back     alignment and structure
>pdb|2PEL|A Chain A, Peanut Lectin Length = 236 Back     alignment and structure
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181 Back     alignment and structure
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237 Back     alignment and structure
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261 Back     alignment and structure
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253 Back     alignment and structure
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 Back     alignment and structure
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 Back     alignment and structure
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181 Back     alignment and structure
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181 Back     alignment and structure
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181 Back     alignment and structure
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187 Back     alignment and structure
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234 Back     alignment and structure
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180 Back     alignment and structure
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257 Back     alignment and structure
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257 Back     alignment and structure
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238 Back     alignment and structure
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242 Back     alignment and structure
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182 Back     alignment and structure
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233 Back     alignment and structure
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241 Back     alignment and structure
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237 Back     alignment and structure
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242 Back     alignment and structure
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia)) Complex With Y Human Blood Group Determinant Length = 243 Back     alignment and structure
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I Length = 242 Back     alignment and structure
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 1e-49
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 6e-48
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 8e-48
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 1e-47
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 6e-47
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 7e-47
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 1e-46
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 1e-46
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 7e-46
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 8e-46
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 2e-45
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 2e-45
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 6e-45
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 1e-44
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 3e-44
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 1e-43
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 2e-43
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 3e-43
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 2e-41
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 6e-41
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 6e-41
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 2e-40
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 8e-40
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 1e-23
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 9e-22
1nls_A 237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 4e-21
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 5e-18
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 2e-04
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 2e-04
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251 Back     alignment and structure
 Score =  162 bits (410), Expect = 1e-49
 Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 29/226 (12%)

Query: 32  SFIYNGFR--SANLSLDGIAQFTSNGLLKLTNETKG------QIGHAFYPAPIPFKNNNS 83
           SF+++ F+    NL L G A  T  G+L+LTN  K        +G A Y API   ++  
Sbjct: 5   SFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSA- 63

Query: 84  NSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNL 143
                 G V SF+T+F F+I +  +    A G+AF +AP    P +    +LGLF+ +  
Sbjct: 64  -----TGLVASFATSFRFTIYAP-NIATIADGLAFFLAPVASAPDS-GGGFLGLFDSAVS 116

Query: 144 GNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRP 203
           G+ T    AVE DT EN  F+D    H+G D+NS+ S  +          V  +L +G  
Sbjct: 117 GS-TYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKT----------VKWSLANGEA 165

Query: 204 MQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY 249
            +V + Y+   K    +L   +       +L+   DLSSVL + + 
Sbjct: 166 AKVLITYNSAVKLLVASLVYPSSKTS--FILADIVDLSSVLPEWVR 209
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239 Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242 Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242 Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237 Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232 Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240 Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226 Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252 Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261 Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239 Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243 Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238 Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233 Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257 Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181 Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253 Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234 Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242 Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240 Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113 Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253 Back     alignment and structure
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
3ujo_A281 Legume lectin; carbohydrate-binding, galactose, ad 100.0
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 100.0
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 100.0
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 100.0
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 100.0
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 100.0
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 100.0
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 100.0
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 100.0
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 100.0
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 100.0
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 100.0
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 100.0
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 100.0
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 100.0
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 100.0
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 100.0
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 100.0
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 100.0
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 100.0
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 100.0
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 100.0
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 100.0
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 100.0
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 99.96
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 99.96
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 99.96
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 99.95
1nls_A 237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 99.92
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 99.92
2a6y_A256 EMP47P (FORM1); beta sandwich, carbohydrate bindin 99.84
2a6z_A222 EMP47P (FORM2); beta sandwich, carbohydrate bindin 99.55
2a6v_A226 EMP46P; beta sandwich, carbohydrate binding protei 99.14
2ltn_B52 PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP 93.39
>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A* Back     alignment and structure
Probab=100.00  E-value=1.4e-58  Score=413.91  Aligned_cols=217  Identities=30%  Similarity=0.507  Sum_probs=180.7

Q ss_pred             HHHHHHHHHHHHHHhhccccCCCCceEEeCCCCCCCeEEeeceEECcCCeEEccCCCCC------eEEEEEecCceeccC
Q 040418            7 ILLVSLLMIIIIIITSSAAAKDKNPSFIYNGFRSANLSLDGIAQFTSNGLLKLTNETKG------QIGHAFYPAPIPFKN   80 (249)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~sF~f~~F~~~~l~l~G~A~~~~~g~l~LT~~~~~------~~Grv~y~~Pv~l~d   80 (249)
                      .++++++ +||+|+++  +.++..++|+|++|...+|+++|+|++. +|.||||++..+      ++|||+|++||+|||
T Consensus         6 ~~~~~~~-~fl~l~~~--~~sa~~~sF~f~~F~~~nL~l~GdA~i~-~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d   81 (281)
T 3ujo_A            6 FTMKRIV-LFLILLTK--AASANLISFTFKKFNETNLILQRDATVS-SGKLRITKAAENGVPTAGSLGRAFYSTPIQIWD   81 (281)
T ss_dssp             ---------------------CEEEEEEESSCCSTTEEECSSCCCB-TTBEECSCCCSSCCCCSSCEEEEEESSCEECBC
T ss_pred             HHHHHHH-HHHHHHcc--cCcCCcceEEcCCCCccCEEEecceEEe-CCEEEeCCCCCCCcccCCceEEEEECCCEEccc
Confidence            3344444 45566654  3456889999999998999999999997 999999998765      899999999999999


Q ss_pred             CCCCCCCCCCeeeeEEEEEEEEEeeccccCccccceEEEEccCCCCCCCCCCCcccCCcCCCCCCCCCcEEEEEEecCcc
Q 040418           81 NNSNSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIEN  160 (249)
Q Consensus        81 ~~~~~~~~t~~~asFsT~F~F~I~~~~~~~~~gdGlAFvl~p~~~~p~~s~Gg~LGl~n~~~~~~~~~~~vAVEFDT~~n  160 (249)
                      +.      +++++||+|+|+|.|.+. +...+||||||||+|....| ++.||||||+|.+++ +..+|.|||||||++|
T Consensus        82 ~~------tg~vaSFsTsFsF~I~~~-~~~~~gdGlAF~laP~~~~p-~~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~N  152 (281)
T 3ujo_A           82 NT------TGTVASWATSFTFNLQAP-NAASPADGLAFALVPVGSQP-KDKGGFLGLFDSKNY-ASSNQTVAVEFDTFYN  152 (281)
T ss_dssp             SS------SCCBEEEEEEEEEECCCS-STTSCCEEEEEEEEETTCCC-CCCGGGTTTCSCSSC-CTTSCCEEEEECCSCC
T ss_pred             CC------CCCceeEEEEEEEEEecC-CCCCCCCceEEEEecCCCCC-CCCcceeeeccccCC-CccCcEEEEEEecccc
Confidence            87      899999999999999976 56679999999999987655 478999999998765 6678999999999999


Q ss_pred             CCCCCCCCCeeEEEcCCCcccccccCCccCCCcccccccCCcceEEEEEEeCCCcEEEEEEeeCCCCCCCCceeeEEecC
Q 040418          161 HEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDL  240 (249)
Q Consensus       161 ~~~~Dp~~nHVgIdvns~~S~~t~~~~~~~~~~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~p~~p~ls~~vdL  240 (249)
                      .+| ||++||||||+|++.|.++.+|          ++.+|+.++|||+||+.+|+|+|+|.+.+.  |.+|+|++.|||
T Consensus       153 ~e~-Dp~~nHVGIDvNSi~S~~t~~~----------~l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~--~~~~~lS~~vDL  219 (281)
T 3ujo_A          153 GGW-DPTERHIGIDVNSIKSIKTTSW----------DFANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSERVDL  219 (281)
T ss_dssp             CSS-CCSSSEEEEEESSSCCSCEEEC----------CCCSSCCEEEEEEECTTTCEEEEEEECTTT--CCCEEEEEECCS
T ss_pred             ccC-CCCCCeEEEEcCCCCccccccc----------cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCCceEEEEech
Confidence            875 9999999999999999988875          467999999999999999999999998653  558999999999


Q ss_pred             CcccCccCC
Q 040418          241 SSVLNDAMY  249 (249)
Q Consensus       241 s~~l~e~vy  249 (249)
                      +++|||+||
T Consensus       220 ~~~L~e~v~  228 (281)
T 3ujo_A          220 TSVLPEWVS  228 (281)
T ss_dssp             TTTSCSEEE
T ss_pred             HHhccCcEE
Confidence            999999987
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Back     alignment and structure
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Back     alignment and structure
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 Back     alignment and structure
>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A Back     alignment and structure
>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A Back     alignment and structure
>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 249
d1gzca_239 b.29.1.1 (A:) Legume lectin {Cockspur coral tree ( 1e-49
d1f9ka_234 b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca 1e-48
d1hqla_236 b.29.1.1 (A:) Legume lectin {Griffonia simplicifol 2e-48
d1g8wa_233 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 6e-48
d2d3sa1237 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso 2e-47
d1qnwa_237 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 5e-47
d1fx5a_240 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 2e-46
d1avba_226 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 4e-45
d1v6ia_232 b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog 6e-45
d1leda_243 b.29.1.1 (A:) Legume lectin {West-central african 1e-44
d1g7ya_253 b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos 2e-44
d1g9fa_251 b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) 1e-43
d1n47a_233 b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi 7e-42
d1fnya_237 b.29.1.1 (A:) Legume lectin {Black locust (Robinia 8e-42
d1dbna_239 b.29.1.1 (A:) Legume lectin {Maackia amurensis, le 2e-41
g2ltn.1229 b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum 3e-40
g1qmo.1230 b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich 1e-39
d1ioaa_228 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 9e-39
d1ukga_241 b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero 5e-37
d1dhkb_204 b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar 5e-36
d1nlsa_ 237 b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia 3e-26
d1nlsa_237 b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia 7e-26
d1gv9a_228 b.29.1.13 (A:) Carbohydrate-recognition domain of 2e-14
d2a6za1221 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake 0.003
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

 Score =  160 bits (407), Expect = 1e-49
 Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 29/226 (12%)

Query: 32  SFIYNGFRSA--NLSLDGIAQFTSNGLLKLTNETKG------QIGHAFYPAPIPFKNNNS 83
           SF ++ F     NL+L G A  T +G+L+LT   +         G   Y  P+   ++ +
Sbjct: 5   SFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTT 64

Query: 84  NSSTANGTVFSFSTTFVFSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNL 143
                  TV SF T F FSI   +   L A G+ F + PT+  P      YLG+FN S  
Sbjct: 65  G------TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQ-GYGYLGVFNNSKQ 117

Query: 144 GNETNHVFAVELDTIENHEFSDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRP 203
            N +    AVE DT  N  +      H+GID+NS++S  +              L +G+ 
Sbjct: 118 DN-SYQTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKT----------QPFQLDNGQV 165

Query: 204 MQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY 249
             V ++YD   K  +V L   +     +  ++   D+  VL D + 
Sbjct: 166 ANVVIKYDAPSKILHVVLVYPS--SGAIYTIAEIVDVKQVLPDWVD 209
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234 Back     information, alignment and structure
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236 Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233 Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237 Back     information, alignment and structure
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237 Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240 Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226 Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232 Back     information, alignment and structure
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243 Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253 Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251 Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233 Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237 Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239 Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228 Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241 Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204 Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 Back     information, alignment and structure
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228 Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
d1hqla_236 Legume lectin {Griffonia simplicifolia, lectin I-b 100.0
d1leda_243 Legume lectin {West-central african legume (Griffo 100.0
d1fx5a_240 Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI 100.0
d1qnwa_237 Legume lectin {Furze (Ulex europaeus), UEA-II [Tax 100.0
d2d3sa1237 Legume lectin {Winged bean (Psophocarpus tetragono 100.0
d1gzca_239 Legume lectin {Cockspur coral tree (Erythrina cris 100.0
d1f9ka_234 Legume lectin {Winged bean (Psophocarpus tetragono 100.0
d1g9fa_251 Legume lectin {Soybean (Glycine max) [TaxId: 3847] 100.0
d1g8wa_233 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1g7ya_253 Legume lectin {Horse gram (Dolichos biflorus), dif 100.0
d1dbna_239 Legume lectin {Maackia amurensis, leukoagglutinin 100.0
d1v6ia_232 Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3 100.0
d1n47a_233 Legume lectin {Hairy vetch (Vicia villosa), isolec 100.0
g1qmo.1230 Legume lectin {Field bean (Dolichos lablab), Fril 100.0
d1fnya_237 Legume lectin {Black locust (Robinia pseudoacacia) 100.0
d1ukga_241 Legume lectin {Bloodwood tree (Pterocarpus angolen 100.0
g2ltn.1229 Legume lectin {Garden pea (Pisum sativum) [TaxId: 100.0
d1avba_226 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1ioaa_228 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1dhkb_204 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1nlsa_237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 99.92
d1gv9a_228 Carbohydrate-recognition domain of P58/ERGIC-53 {R 99.92
d1nlsa_ 237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 99.9
d2a6za1221 Emp47p N-terminal domain {Baker's yeast (Saccharom 99.8
d2a6va1218 Emp46p N-terminal domain {Baker's yeast (Saccharom 99.71
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=1.9e-52  Score=364.90  Aligned_cols=200  Identities=31%  Similarity=0.441  Sum_probs=176.8

Q ss_pred             CceEEeCCCCC---CCeEEeeceEECcCCeEEccCCC------CCeEEEEEecCceeccCCCCCCCCCCCeeeeEEEEEE
Q 040418           30 NPSFIYNGFRS---ANLSLDGIAQFTSNGLLKLTNET------KGQIGHAFYPAPIPFKNNNSNSSTANGTVFSFSTTFV  100 (249)
Q Consensus        30 ~~sF~f~~F~~---~~l~l~G~A~~~~~g~l~LT~~~------~~~~Grv~y~~Pv~l~d~~~~~~~~t~~~asFsT~F~  100 (249)
                      +++|+|++|..   ++|+|+|+|.+. +|.|+||+..      ..++|||+|++||+||++.      +++++||+|+|+
T Consensus         1 ~~sF~f~~F~~~~~~~l~l~G~A~~~-~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~------t~~~asFsT~F~   73 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDSIIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNK------TESVASFYTEFT   73 (236)
T ss_dssp             CCEEEESCSCSCGGGTEEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECCCST------TCCCCEEEEEEE
T ss_pred             CEEEEeCCCCCCCcCCEEEeccEEec-CCEEEEecCCCCCcccccceEEEEECCCEEeecCC------CCceeEEEEEEE
Confidence            46999999974   679999999985 8999999864      4578999999999999987      899999999999


Q ss_pred             EEEeeccccCccccceEEEEccCCCCCCCCCCCcccCCcCCCCC-CCCCcEEEEEEecCccCCCCCCCCCeeEEEcCCCc
Q 040418          101 FSILSEFHTTLSAHGIAFVIAPTRGLPGARPSQYLGLFNESNLG-NETNHVFAVELDTIENHEFSDINDNHVGIDINSLK  179 (249)
Q Consensus       101 F~I~~~~~~~~~gdGlAFvl~p~~~~p~~s~Gg~LGl~n~~~~~-~~~~~~vAVEFDT~~n~~~~Dp~~nHVgIdvns~~  179 (249)
                      |.|...  ...+||||||||+|... +.+..|++||+++..+.+ ...++.|||||||++|.+++||+++|||||+|++.
T Consensus        74 F~i~~~--~~~~gDGlAFvl~p~~~-~~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHIgIdvns~~  150 (236)
T d1hqla_          74 FFLKIT--GNGPADGLAFFLAPPDS-DVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIV  150 (236)
T ss_dssp             EEEEEC--SSCCCCEEEEEEECTTC-CCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSS
T ss_pred             EEEeCC--CCCCCceEEEEEeCCCC-CCCCCccccccccccccCCcccCceEEEEeeCccCCCCCCCCCCEEEEEcCCcc
Confidence            999875  56789999999999764 446789999999876553 34688999999999999889999999999999999


Q ss_pred             ccccccCCccCCCcccccccCCcceEEEEEEeCCCcEEEEEEeeCCCCCCCCceeeEEecCCcccCccCC
Q 040418          180 SEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTNVTLAPINIPKPRLPLLSLSRDLSSVLNDAMY  249 (249)
Q Consensus       180 S~~t~~~~~~~~~~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~p~~p~ls~~vdLs~~l~e~vy  249 (249)
                      |.++.++       ...++++|+.++|||+||+.+|+|+|+|+..   +|..|+|++.|||+++|+|+||
T Consensus       151 s~~~~~~-------~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~---~~~~~~ls~~vdL~~~l~~~v~  210 (236)
T d1hqla_         151 SVATKRW-------EDSDIFSGKIATARISYDGSAEILTVVLSYP---DGSDYILSHSVDMRQNLPESVR  210 (236)
T ss_dssp             CSEEEEC-------CHHHHTSCSCEEEEEEEETTTTEEEEEEEET---TTEEEEEEEECCGGGTSCSEEE
T ss_pred             ccccccc-------ccccccCCCEEEEEEEEeCCCcEEEEEEecC---CCCCeeEEEEeCHHHhCCCcEE
Confidence            9888765       3568999999999999999999999999875   5678999999999999999987
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Back     information, alignment and structure
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Back     information, alignment and structure
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure